Unique Name	Descriptor	Wide Peak Limits	Peak Limits	Region Limits	q values	Residual q values after removing segments shared with higher peaks	Broad or Focal	Amplitude Threshold	TCGA-IG-A3I8-01A-11D-A246-01	TCGA-IG-A3QL-01A-11D-A246-01	TCGA-IG-A3Y9-01A-12D-A246-01	TCGA-IG-A3YA-01A-11D-A246-01	TCGA-IG-A3YB-01A-11D-A246-01	TCGA-IG-A3YC-01A-11D-A246-01	TCGA-IG-A4P3-01A-11D-A25X-01	TCGA-IG-A4QS-01A-11D-A25X-01	TCGA-IG-A4QT-01A-21D-A25X-01	TCGA-IG-A50L-01A-11D-A25X-01	TCGA-IG-A51D-01A-11D-A25X-01	TCGA-L5-A43C-01A-11D-A246-01	TCGA-L5-A43E-01A-11D-A246-01	TCGA-L5-A43H-01A-11D-A246-01	TCGA-L5-A43I-01A-11D-A246-01	TCGA-L5-A43J-01A-12D-A246-01	TCGA-L5-A43M-01A-11D-A246-01	TCGA-L5-A4OE-01A-11D-A25X-01	TCGA-L5-A4OF-01A-11D-A25X-01	TCGA-L5-A4OG-01A-11D-A25X-01	TCGA-L5-A4OH-01A-11D-A25X-01	TCGA-L5-A4OI-01A-11D-A25X-01	TCGA-L5-A4OJ-01A-11D-A25X-01	TCGA-L5-A4OM-01A-11D-A25X-01	TCGA-L5-A4ON-01A-11D-A25X-01	TCGA-L5-A4OO-01A-11D-A25X-01	TCGA-L5-A4OP-01A-11D-A25X-01	TCGA-L5-A4OQ-01A-11D-A25X-01	TCGA-L5-A4OR-01A-11D-A25X-01	TCGA-L7-A56G-01A-21D-A25X-01	TCGA-LN-A49K-01A-11D-A246-01	TCGA-LN-A49L-01A-11D-A246-01	TCGA-LN-A49M-01A-21D-A25X-01	TCGA-LN-A49N-01A-11D-A246-01	TCGA-LN-A49O-01A-11D-A246-01	TCGA-LN-A49P-01A-11D-A246-01	TCGA-LN-A49R-01A-11D-A246-01	TCGA-LN-A49S-01A-11D-A246-01	TCGA-LN-A49U-01A-31D-A25X-01	TCGA-LN-A49V-01A-11D-A246-01	TCGA-LN-A49W-01A-11D-A25X-01	TCGA-LN-A49X-01A-31D-A25X-01	TCGA-LN-A49Y-01A-11D-A25X-01	TCGA-LN-A4A1-01A-21D-A25X-01	TCGA-LN-A4A2-01A-31D-A25X-01	TCGA-LN-A4A3-01A-11D-A25X-01	TCGA-LN-A4A4-01A-11D-A25X-01	TCGA-LN-A4A5-01A-21D-A25X-01	TCGA-LN-A4A6-01A-11D-A25X-01	TCGA-LN-A4A8-01A-32D-A25X-01	
Amplification Peak  1	1p13.1  	chr1:116001985-116922852(probes 65032:65689)  	chr1:116459461-116918698(probes 65372:65688)  	chr1:116459461-116923114(probes 65372:65691)  	0.2376	     0.2376		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	1	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	0	1	0	0	0	2	0	0	0	0	2	1	0	0	0	0	0	0	0	0	
Amplification Peak  2	1q25.2  	chr1:120522602-249250621(probes 67827:129193) 	chr1:178425133-178758364(probes 85248:85466)  	chr1:178425133-178763852(probes 85248:85469)  	0.12026	    0.12026		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	1	1	0	0	1	1	0	0	1	1	0	0	1	0	0	0	0	1	0	1	1	1	1	2	0	2	0	0	1	1	2	0	0	0	0	0	2	1	2	0	0	0	0	1	1	0	0	0	1	
Amplification Peak  3	2q14.2  	chr2:102883357-123680256(probes 182887:193974)	chr2:121841194-121882166(probes 192809:192844)	chr2:121841194-121882337(probes 192809:192847)	0.22151	    0.22151		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	2	0	0	1	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	1	0	0	1	0	1	0	2	0	0	1	0	0	0	2	1	1	0	0	0	1	2	0	0	2	0	0	0	1	0	
Amplification Peak  4	3q29    	chr3:153593438-198022430(probes 344766:366975)	chr3:195144439-196970124(probes 366557:366839)	chr3:145081775-198022430(probes 340262:366975)	0.00034192	 0.00034192		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	1	1	2	1	1	2	1	0	2	2	0	2	2	0	2	0	1	0	0	0	0	0	2	1	1	2	0	1	2	2	1	1	1	1	1	1	1	0	2	1	0	2	1	2	1	2	1	1	1	
Amplification Peak  5	6p21.1  	chr6:43416343-44056584(probes 595984:596310)    	chr6:43576770-43756051(probes 596052:596129)    	chr6:42880938-44061606(probes 595719:596312)    	0.015362	   0.016905		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	2	0	2	2	0	0	1	1	0	0	1	0	0	2	0	1	0	1	0	0	1	0	0	0	0	0	
Amplification Peak  6	6q12    	chr6:65318771-65423033(probes 605675:605728)    	chr6:65319967-65327563(probes 605676:605676)    	chr6:65319967-65331526(probes 605676:605679)    	0.19465	    0.20715		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	2	0	0	1	0	0	1	1	0	0	0	0	2	0	0	0	2	0	0	0	0	0	0	0	0	0	
Amplification Peak  7	7p11.2  	chr7:54842550-55715052(probes 699084:699825)    	chr7:55221656-55507579(probes 699502:699707)    	chr7:52603199-57924998(probes 697679:700248)    	1.3551e-07	 1.8091e-07		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	1	2	0	0	1	1	0	0	2	1	1	1	1	2	1	0	1	1	1	2	0	2	1	2	1	0	1	2	1	1	0	0	0	1	0	1	0	1	2	1	1	2	1	1	2	2	0	1	2	
Amplification Peak  8	7q21.3  	chr7:87180199-99142620(probes 711542:717287)    	chr7:92866978-93469599(probes 713841:714206)    	chr7:84182369-109072928(probes 710056:722283)  	6.9104e-06	 7.6041e-06		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	2	0	0	1	2	0	1	0	1	2	1	1	1	1	0	0	1	0	1	2	0	0	2	2	1	0	1	1	1	1	2	0	0	2	1	1	1	1	1	0	2	2	2	1	2	2	0	1	1	
Amplification Peak  9	8p11.21 	chr8:41578578-42518767(probes 772213:772820)    	chr8:42022960-42133101(probes 772470:772528)    	chr8:41284593-42521400(probes 772035:772822)    	0.014739	   0.014739		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	2	0	2	0	0	2	1	0	0	1	1	2	1	2	0	0	0	1	0	0	1	0	1	1	1	0	0	1	0	1	1	0	0	0	2	0	1	1	1	0	1	2	0	0	1	2	0	1	0	
Amplification Peak 10	8q24.21 	chr8:128022833-129051939(probes 819296:820018)	chr8:128517808-128545382(probes 819650:819662)	chr8:112995902-146364022(probes 809796:829791)	1.1595e-11	 1.1595e-11		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	2	1	1	1	1	0	2	0	2	1	2	2	1	1	2	0	1	0	0	2	1	2	1	2	1	0	2	1	2	1	2	1	1	2	2	2	2	2	2	1	1	1	2	2	1	2	2	1	0	
Amplification Peak 11	10p11.21	chr10:35335459-35408297(probes 921937:921958)  	chr10:35338674-35404274(probes 921938:921957)  	chr10:34795334-35745220(probes 921720:922068)  	0.018882	   0.018882		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	0	1	0	2	1	0	0	0	1	0	1	0	0	0	0	0	0	0	2	0	0	1	0	0	0	2	2	1	1	0	1	0	0	1	0	0	1	0	1	0	
Amplification Peak 12	11p13   	chr11:34435171-36024467(probes 1000387:1001677)	chr11:35244059-35263023(probes 1001046:1001060)	chr11:34798611-35757903(probes 1000599:1001499)	0.046791	   0.051238		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	1	0	0	1	0	0	1	1	0	0	0	0	0	1	0	0	0	0	2	0	2	0	2	0	0	0	1	0	0	0	1	0	0	
Amplification Peak 13	11q13.3 	chr11:69523550-70248899(probes 1015255:1015619)	chr11:69940436-69993573(probes 1015459:1015489)	chr11:66622351-74723966(probes 1014099:1017924)	6.1399e-43	 6.1399e-43		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	0	2	2	0	2	2	0	0	0	2	0	0	2	2	1	1	1	1	1	1	0	0	2	0	0	0	2	0	2	2	0	2	2	0	0	2	1	0	2	2	1	2	2	2	2	2	2	2	2	
Amplification Peak 14	12p13.33	chr12:1-1071814(probes 1056037:1056115)           	chr12:1-1037228(probes 1056037:1056098)           	chr12:1-1866203(probes 1056037:1056243)           	0.014126	   0.022577		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	2	0	1	2	0	1	0	0	1	0	0	0	1	0	1	2	1	0	0	0	2	0	1	0	1	0	0	1	2	1	1	0	0	2	0	1	1	0	1	1	0	0	1	1	0	2	0	1	2	
Amplification Peak 15	12p12.1 	chr12:24880663-25784000(probes 1070114:1070641)	chr12:24885718-25556703(probes 1070115:1070462)	chr12:24885718-25789332(probes 1070115:1070643)	0.099202	     0.1647		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	2	0	0	2	1	1	2	0	1	0	0	0	1	0	1	0	1	0	0	0	2	0	1	1	1	0	0	0	2	1	1	2	0	2	1	1	1	0	1	1	0	0	1	0	1	2	0	1	1	
Amplification Peak 16	17q24.3 	chr17:66364805-70596221(probes 1351175:1354229)	chr17:67413117-67669243(probes 1351862:1352019)	chr17:67311149-68036768(probes 1351807:1352229)	0.076179	   0.076179		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	1	0	0	0	0	1	0	0	1	1	0	1	1	1	0	0	1	0	2	2	0	2	0	1	1	0	1	0	1	0	0	0	0	1	0	1	1	0	1	0	0	2	1	1	1	1	0	0	0	
Amplification Peak 17	18p11.32	chr18:983189-2081265(probes 1358651:1359036)      	chr18:985109-1075852(probes 1358652:1358703)      	chr18:1-2087487(probes 1358528:1359038)           	0.011924	   0.011924		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	1	1	0	0	0	0	0	0	1	0	1	0	1	2	0	0	0	0	0	1	1	0	2	2	2	1	1	1	0	0	1	1	0	0	0	
Amplification Peak 18	18q11.2 	chr18:20863588-22012348(probes 1367835:1368524)	chr18:20864023-20890717(probes 1367836:1367851)	chr18:19404300-22736415(probes 1367020:1369091)	0.0014244	  0.0014244		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	0	0	0	0	2	0	0	0	0	0	1	0	2	0	1	2	0	2	0	0	0	0	2	1	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	2	0	0	0	
Amplification Peak 19	19p13.2 	chr19:7296453-7398264(probes 1403240:1403247)    	chr19:7300056-7397014(probes 1403241:1403246)    	chr19:7300056-7405648(probes 1403241:1403249)    	0.0032259	  0.0032259		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	1	0	0	0	2	0	0	0	0	2	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	2	0	0	0	0	1	0	0	0	2	0	2	0	0	2	0	
Amplification Peak 20	19q12   	chr19:29460241-35198907(probes 1411136:1415061)	chr19:31500860-31849727(probes 1412650:1412895)	chr19:30810086-31852223(probes 1412143:1412898)	0.095684	   0.095684		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	1	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	1	1	0	1	0	0	0	2	1	0	2	1	1	1	2	0	0	0	2	0	0	1	0	2	0	0	0	0	0	1	1	1	0	
Amplification Peak 21	Xp11.4  	chrX:40732423-40742477(probes 1516983:1516991)  	chrX:40732510-40742181(probes 1516984:1516990)  	chrX:40732510-40746768(probes 1516984:1516993)  	0.057199	   0.057199		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	1	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	1	0	1	2	0	0	0	0	0	1	0	2	0	
Deletion Peak  1	1p35.2  	chr1:1-249250621(probes 1:129193)                   	chr1:32081900-32113450(probes 15143:15160)          	chr1:32089952-32093631(probes 15146:15147)          	0.23807	    0.23807		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	0	0	0	0	1	1	0	1	0	0	0	1	0	1	1	1	1	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	
Deletion Peak  2	1q44    	chr1:178641946-249250621(probes 85406:129193)     	chr1:245911868-247052144(probes 128538:128764)    	chr1:246037293-246037919(probes 128652:128653)    	0.15791	    0.15791		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	
Deletion Peak  3	2q22.1  	chr2:139655617-143637838(probes 201408:203838)    	chr2:140976294-142894275(probes 202130:203401)    	chr2:141580205-142143404(probes 202476:202821)    	2.3877e-07	 2.1318e-06		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	1	0	1	1	1	0	0	1	1	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	
Deletion Peak  4	2q37.2  	chr2:192813454-243199373(probes 231829:260552)    	chr2:236401743-237043138(probes 257006:257400)    	chr2:227199264-243199373(probes 251646:260552)    	0.075756	    0.18982		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	1	0	1	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0	1	1	0	0	1	0	0	1	0	0	0	
Deletion Peak  5	3p14.2  	chr3:59034763-61547330(probes 293464:294359)        	chr3:59702822-61238217(probes 293972:294173)        	chr3:61027858-61268120(probes 293978:294191)        	1.1049e-05	 1.2357e-05		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	1	1	1	1	1	0	1	1	0	1	1	1	1	1	1	1	1	1	0	1	1	0	1	1	1	0	1	1	0	1	1	1	1	0	1	1	0	1	1	1	1	1	1	1	1	1	1	
Deletion Peak  6	3q11.1  	chr3:70016017-93778057(probes 300627:311500)        	chr3:90485637-93778057(probes 311488:311500)        	chr3:74611544-93740691(probes 303826:311491)        	0.030052	    0.18982		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	
Deletion Peak  7	3q26.31 	chr3:173999806-175760559(probes 354935:355679)    	chr3:174575145-175760559(probes 355290:355679)    	chr3:174889888-174893774(probes 355485:355486)    	0.043481	   0.043213		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  8	4p15.2  	chr4:1-31150140(probes 366976:385768)                	chr4:20727465-21952452(probes 379034:379957)        	chr4:21362709-21364310(probes 379496:379497)        	0.12884	     0.1296		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	1	0	1	1	1	0	1	0	1	0	0	0	0	1	1	0	1	0	0	1	1	0	1	0	0	1	0	1	1	1	1	0	0	1	0	1	0	0	1	1	1	1	1	0	0	1	1	
Deletion Peak  9	4q22.1  	chr4:90844993-93240505(probes 416882:418039)        	chr4:91148280-91705651(probes 416980:417302)        	chr4:91380058-91628739(probes 417117:417253)        	0.00057432	 0.00057432		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	0	0	0	0	1	0	1	0	1	0	0	0	1	1	1	0	1	0	0	0	0	0	0	0	0	1	0	1	0	1	0	1	0	1	0	1	0	1	0	1	1	0	1	0	0	1	0	
Deletion Peak 10	5q11.2  	chr5:58260298-59787985(probes 500860:501804)        	chr5:58260298-59787985(probes 500860:501804)        	chr5:58626130-58923848(probes 501120:501359)        	0.00015226	  0.0016797		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	0	1	0	0	1	0	1	1	0	1	0	0	1	0	1	1	1	1	0	1	1	0	1	1	0	1	1	1	0	0	1	0	0	1	1	1	1	1	0	1	0	1	0	0	1	0	1	
Deletion Peak 11	5q12.3  	chr5:59884318-94417957(probes 501861:520054)        	chr5:65889312-66468313(probes 504916:505374)        	chr5:66162398-66163508(probes 505146:505147)        	0.0057526	   0.049849		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	0	1	1	0	1	0	1	1	0	1	0	0	1	0	1	1	1	1	0	1	1	0	1	1	0	1	1	1	0	1	1	0	0	1	1	1	1	1	0	1	0	1	0	0	1	0	1	
Deletion Peak 12	6p25.3  	chr6:1608837-2250882(probes 570829:571248)            	chr6:1621405-2177023(probes 570832:571202)            	chr6:1716711-2256626(probes 570913:571251)            	0.0015269	  0.0015269		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	0	0	1	1	0	1	0	1	1	1	0	1	0	0	0	1	0	0	0	0	1	1	1	1	1	0	1	0	0	1	0	1	0	0	0	1	1	0	0	0	1	0	0	0	0	0	
Deletion Peak 13	6q26    	chr6:64422985-171115067(probes 605233:666855)      	chr6:161767520-163153207(probes 662475:663085)    	chr6:162127515-162136158(probes 662781:662782)    	0.16543	    0.16875		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	1	1	0	1	1	1	0	1	0	0	
Deletion Peak 14	7q31.1  	chr7:109599468-111366370(probes 722557:723258)    	chr7:110236682-111354928(probes 722973:723252)    	chr7:110437436-111426681(probes 723063:723301)    	1.1053e-06	 1.1053e-06		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	1	1	0	1	0	0	1	1	0	0	1	0	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	1	0	0	0	1	1	1	0	0	1	0	0	1	0	
Deletion Peak 15	8p23.2  	chr8:2079140-6262191(probes 748953:750804)            	chr8:2784419-4854274(probes 749001:750425)            	chr8:3520602-3544535(probes 749714:749715)            	0.13798	    0.13798		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	1	0	1	1	0	1	1	0	0	0	1	1	0	1	1	0	1	0	0	0	0	1	0	0	0	1	0	1	1	1	0	0	0	1	0	0	1	0	1	1	1	1	0	1	0	0	
Deletion Peak 16	9p21.3  	chr9:21865498-21997722(probes 843232:843296)        	chr9:21959052-21997722(probes 843283:843296)        	chr9:21410163-25773011(probes 842955:845649)        	2.2929e-48	 2.2929e-48		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	1	1	1	1	1	1	0	1	1	1	0	1	1	1	1	0	1	0	1	0	0	1	1	1	1	0	0	1	1	1	1	1	1	1	1	1	1	0	1	1	1	1	1	1	1	1	1	1	
Deletion Peak 17	10p11.21	chr10:34059131-35328087(probes 921189:921928)      	chr10:34597962-35128523(probes 921599:921909)      	chr10:34865759-34867204(probes 921755:921756)      	0.0048136	  0.0048136		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	1	0	0	0	1	0	0	1	0	0	0	1	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	
Deletion Peak 18	10q23.31	chr10:89617158-90533234(probes 950047:950723)      	chr10:89617402-89735596(probes 950048:950236)      	chr10:89679047-89679099(probes 950143:950144)      	0.00016773	 0.00016773		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	1	0	1	0	0	0	0	1	0	1	0	1	0	1	1	1	0	1	1	0	1	0	0	1	0	0	1	1	0	1	1	0	0	0	1	0	0	0	0	0	1	1	1	0	0	1	1	0	
Deletion Peak 19	11p15.4 	chr11:3872464-4115961(probes 979922:980060)          	chr11:3872464-4115961(probes 979922:980060)          	chr11:3999073-4001007(probes 979992:979993)          	0.036223	   0.036223		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	1	0	0	0	0	1	0	1	0	1	0	0	1	0	0	1	1	0	0	0	0	1	1	0	1	1	1	0	1	1	1	1	1	0	1	0	0	1	0	1	1	1	0	0	1	0	
Deletion Peak 20	11q24.3 	chr11:111284730-135006516(probes 1040232:1056036)	chr11:130090905-130190620(probes 1053539:1053581)	chr11:130134442-130192973(probes 1053557:1053585)	0.13798	    0.13798		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	1	1	1	0	0	1	1	0	1	1	0	0	0	1	0	0	0	0	1	0	1	1	0	1	1	1	0	1	1	0	0	1	0	0	1	1	0	0	1	1	1	0	1	1	1	
Deletion Peak 21	13q14.2 	chr13:1-115169878(probes 1130014:1186689)         	chr13:48984816-48992809(probes 1148781:1148791)    	chr13:48936047-48997006(probes 1148724:1148795)    	0.21234	    0.21437		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	1	1	1	0	0	1	0	1	1	0	0	0	0	0	0	1	1	0	0	0	1	1	0	0	0	0	1	1	1	1	1	1	1	0	1	1	1	1	1	0	0	0	1	1	1	1	1	0	
Deletion Peak 22	15q13.1 	chr15:1-60692978(probes 1236160:1256381)           	chr15:28097279-31135788(probes 1238833:1238847)    	chr15:28482239-28488887(probes 1238841:1238842)    	0.23049	    0.22621		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	0	0	0	1	0	1	0	0	0	0	0	0	1	0	1	1	0	1	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	1	0	1	
Deletion Peak 23	16q23.1 	chr16:78129058-79627770(probes 1313937:1315301)    	chr16:78129058-79247026(probes 1313937:1314949)    	chr16:78563833-79002430(probes 1314414:1314633)    	2.4425e-10	 2.4425e-10		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	0	0	0	1	0	1	0	1	0	1	0	0	1	0	1	1	1	0	0	0	1	0	1	0	0	0	1	1	0	0	0	0	1	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	
Deletion Peak 24	17q24.3 	chr17:70116519-71163787(probes 1353859:1354703)    	chr17:70583958-70640081(probes 1354226:1354261)    	chr17:70609867-70615446(probes 1354244:1354245)    	0.1113	     0.1166		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	1	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 25	18q12.2 	chr18:35235531-39060470(probes 1376780:1379058)    	chr18:36783539-37333360(probes 1377790:1378026)    	chr18:37108839-37114064(probes 1377909:1377910)    	0.037051	   0.036223		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	1	0	0	1	0	1	0	1	0	1	1	0	1	1	1	1	1	0	0	0	0	1	1	0	1	1	0	0	1	1	1	1	1	0	1	0	1	0	0	1	0	0	0	1	1	0	
Deletion Peak 26	19q13.31	chr19:44038462-46149617(probes 1418879:1419975)    	chr19:45009978-45042764(probes 1419531:1419543)    	chr19:44958193-46154731(probes 1419491:1419977)    	0.026815	   0.026341		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	1	0	0	0	0	1	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	1	1	0	0	1	1	1	0	1	1	0	1	1	1	0	0	0	1	0	
Deletion Peak 27	20p12.1 	chr20:14302876-16252980(probes 1433974:1435164)    	chr20:13965126-16036135(probes 1433808:1434945)    	chr20:15466270-15467074(probes 1434377:1434378)    	0.0035188	  0.0035188		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	1	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	
Deletion Peak 28	21q22.2 	chr21:36154821-48129895(probes 1475658:1483064)    	chr21:42546731-42562930(probes 1480368:1480374)    	chr21:42547895-42633899(probes 1480370:1480443)    	0.18982	    0.18982		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	1	1	0	1	1	1	0	1	0	1	1	1	0	1	1	1	0	1	1	0	1	1	0	0	1	0	1	1	1	0	0	1	1	0	1	1	0	0	0	1	0	0	0	1	0	0	1	0	
Deletion Peak 29	22q11.1 	chr22:1-18275090(probes 1483065:1483559)           	chr22:1-17752793(probes 1483065:1483247)           	chr22:1-17990605(probes 1483065:1483394)           	0.070922	   0.075756		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	1	0	1	1	0	1	0	1	0	0	1	0	0	1	0	1	1	0	0	0	1	0	1	0	1	0	1	1	0	0	1	0	1	0	1	0	1	1	0	0	0	1	0	0	0	0	
Deletion Peak 30	Xp21.1  	chrX:30870233-32661893(probes 1512563:1513596)      	chrX:30870233-32181326(probes 1512563:1513270)      	chrX:31637697-31844447(probes 1512884:1513014)      	1.3068e-05	 1.7769e-05		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	1	0	0	0	1	0	1	1	0	0	0	1	1	0	1	1	0	1	0	1	1	1	0	1	0	0	0	1	0	1	0	0	1	1	0	0	0	0	0	1	1	1	0	0	1	0	0	
Deletion Peak 31	Xp11.3  	chrX:44702452-45008304(probes 1518680:1518802)      	chrX:44729401-44977416(probes 1518690:1518789)      	chrX:44837463-44850232(probes 1518740:1518741)      	0.028351	   0.087117		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	1	1	0	1	0	1	0	1	1	0	0	0	1	1	0	1	1	0	0	0	1	1	1	0	1	0	0	0	1	0	1	0	0	1	1	0	0	0	1	1	1	1	1	0	0	1	0	0	
Deletion Peak 32	Xq21.33 	chrX:96134519-98718611(probes 1536684:1538110)      	chrX:95939207-96856298(probes 1536580:1537048)      	chrX:96328149-96329450(probes 1536815:1536816)      	0.017061	   0.016785		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	1	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	0	1	0	1	0	1	0	0	1	1	0	
Amplification Peak  1 - CN values	1p13.1  	chr1:116001985-116922852(probes 65032:65689)  	chr1:116459461-116918698(probes 65372:65688)  	chr1:116459461-116923114(probes 65372:65691)  	0.2376	     0.2376		Actual Copy Change Given	-0.32403	-0.4816	0.17157	0.027778	-0.37363	0.066229	-0.2319	-0.41585	-0.0011519	-0.39979	0.29584	0	0.00356	-0.29023	3.6569	-0.0080129	-0.18923	-0.19754	0.021399	-0.30522	-0.44964	0.022777	0.051245	0.34875	0.87468	-0.049965	0.025515	-0.0036011	0	0.21906	-0.50588	0.44732	0.00041593	0.0021157	0.016565	1.031	0.010564	0.085752	0.021744	0	3.6569	0.15397	0.040185	-0.38826	-0.011749	-0.058506	-0.62274	0.012065	0	0.00055459	
Amplification Peak  2 - CN values	1q25.2  	chr1:120522602-249250621(probes 67827:129193) 	chr1:178425133-178758364(probes 85248:85466)  	chr1:178425133-178763852(probes 85248:85469)  	0.12026	    0.12026		Actual Copy Change Given	-0.32403	0.55549	0.17157	0.027778	-0.01498	0.44172	0.51054	-0.14554	-0.0011519	0.36602	0.29584	0	0.00356	0.54048	-0.14284	-0.0080129	0.089272	-0.19754	0.42755	0.018663	0.69209	0.80722	0.84475	0.34875	1.1033	-0.049965	3.6569	-0.016245	0	0.47863	0.38188	1.894	0.037924	0.0044763	-0.37256	-0.0045695	0.08392	1.5119	0.6629	1.4152	0.070386	-0.0091351	0.040185	0.0051642	0.37241	0.2321	0.0076392	0.012065	0	0.61988	
Amplification Peak  3 - CN values	2q14.2  	chr2:102883357-123680256(probes 182887:193974)	chr2:121841194-121882166(probes 192809:192844)	chr2:121841194-121882337(probes 192809:192847)	0.22151	    0.22151		Actual Copy Change Given	-0.036216	0.95365	-0.096537	0.015308	0.49036	-0.14232	-0.047124	0.095363	0.0020805	-0.34382	0.0055819	0.021247	0.0037465	0.13243	0.01641	0.2601	0.16145	0.096816	0.071104	0.047836	0.44833	0.0071343	0.018442	0.63989	-0.0060904	0.13362	0.0049963	1.1386	0.0068044	0	0.33341	-0.073202	0.055658	-0.0019047	1.1409	0.2456	0.1583	0	0.028481	-0.023017	0.23705	3.3703	-0.9649	0	1.4259	0.029888	-0.0071958	-0.0023553	0.33698	0.0068044	
Amplification Peak  4 - CN values	3q29    	chr3:153593438-198022430(probes 344766:366975)	chr3:195144439-196970124(probes 366557:366839)	chr3:145081775-198022430(probes 340262:366975)	0.00034192	 0.00034192		Actual Copy Change Given	0.86235	0.68775	0.12444	1.0934	0.39588	0.37331	1.5779	0.61389	0.00013863	0.94642	1.001	-0.064556	1.1932	1.2994	-0.02562	1.3794	0.096538	0.60684	-0.065179	0.016265	-0.14592	0.0022709	0.011818	2.1548	0.62934	0.18268	1.488	-0.024126	0.47557	0.95201	1.4486	0.44613	0.64903	0.54605	0.42939	0.20076	0.75624	0.54236	0.042307	1.5684	0.68254	0.01447	2.5289	0.81439	1.2136	0.85838	1.2486	0.38023	0.78892	0.59836	
Amplification Peak  5 - CN values	6p21.1  	chr6:43416343-44056584(probes 595984:596310)    	chr6:43576770-43756051(probes 596052:596129)    	chr6:42880938-44061606(probes 595719:596312)    	0.015362	   0.016905		Actual Copy Change Given	-0.31377	-0.04633	0.032398	-0.0016629	0.054879	0	0.0050867	1.0973	0.0013868	-0.39025	0.0034978	-0.18174	0.15823	-0.03245	0	-0.47315	0.07815	0.097202	0	-0.31529	0.022444	-0.00091866	0.0351	0.33301	3.6569	-0.011749	2.5935	2.9174	-0.26347	0.085677	0.31851	0.37183	-0.034904	-0.45915	0.47426	-0.0011087	-0.044009	1.0207	0.0026357	0.7512	-0.26023	0.14073	0.027029	0.012405	0.39413	-0.098418	-0.0095426	0.0095883	0.0051997	0.0037465	
Amplification Peak  6 - CN values	6q12    	chr6:65318771-65423033(probes 605675:605728)    	chr6:65319967-65327563(probes 605676:605676)    	chr6:65319967-65331526(probes 605676:605679)    	0.19465	    0.20715		Actual Copy Change Given	-0.31377	-0.46334	0.6097	-0.0016629	-0.070866	0	0.0050867	0.35055	0.0013868	0.042678	-0.0040033	-0.18174	0.15823	-0.03245	0	-0.0019989	0.10424	0.097202	0	0.061508	0.022444	-0.026058	0.0351	-0.016166	2.2044	-0.011749	-0.011198	0.67864	-0.26347	0.085677	0.31851	0.51542	0.07369	0.0051711	0.097252	-0.0011087	2.8306	-0.09912	0.0026357	-0.046091	2.353	-0.1143	0.027029	-0.2649	-0.413	-0.098418	-0.0095426	0.0095883	0.0051997	0.0037465	
Amplification Peak  7 - CN values	7p11.2  	chr7:54842550-55715052(probes 699084:699825)    	chr7:55221656-55507579(probes 699502:699707)    	chr7:52603199-57924998(probes 697679:700248)    	1.3551e-07	 1.8091e-07		Actual Copy Change Given	0.045178	0.36949	0.94299	-0.005814	-0.37814	0.41195	0.39928	0.060508	0.001803	2.2388	0.32627	0.22669	0.41563	0.28248	2.2053	0.4447	0.058224	0.68695	0.74404	0.3395	0.9775	-0.0057626	3.6569	0.41394	1.2297	0.13495	0.019643	0.60395	1.1048	0.20641	0.27726	-0.6194	0.046133	0.0173	0.38961	-0.010094	0.39712	-0.049114	0.76312	3.6569	0.76274	0.39662	3.6569	0.41165	0.39413	3.6569	1.7058	0.037924	0.65411	3.6569	
Amplification Peak  8 - CN values	7q21.3  	chr7:87180199-99142620(probes 711542:717287)    	chr7:92866978-93469599(probes 713841:714206)    	chr7:84182369-109072928(probes 710056:722283)  	6.9104e-06	 7.6041e-06		Actual Copy Change Given	0.053521	1.2825	-0.14839	-0.005814	0.3904	2.0869	0.042166	0.59685	0.001803	0.31348	0.99971	0.22669	0.40794	0.28248	0.36526	0.0018826	0.058224	0.65026	-0.20273	0.3395	0.9559	-0.0057626	0.049966	2.209	1.3122	0.13495	0.019643	0.6779	0.13806	0.17293	0.27726	0.9302	0.04259	0.01283	1.2001	0.56205	0.87888	0.6089	0.78074	0.35865	-0.2192	2.9273	3.6569	1.9324	0.41237	2.0758	1.2007	0.0075	0.36468	0.71979	
Amplification Peak  9 - CN values	8p11.21 	chr8:41578578-42518767(probes 772213:772820)    	chr8:42022960-42133101(probes 772470:772528)    	chr8:41284593-42521400(probes 772035:772822)    	0.014739	   0.014739		Actual Copy Change Given	0.56681	1.0363	-0.31869	2.458	-0.41074	-0.16891	1.7371	0.55927	0.0012481	-0.11866	0.32869	0.20733	1.4155	0.21637	2.0778	-0.49605	0.085799	0.091749	0.30745	0	-0.46003	0.83951	-0.22613	0.26042	0.78949	0.16835	-0.0067813	-0.061958	0.38684	-0.53571	0.17464	0.36461	-0.74229	-0.45417	-0.050776	1.1621	-0.0696	0.22926	0.74423	0.58195	-0.27296	0.54775	3.6569	-0.011996	-0.047531	0.5359	2.5672	-0.30803	0.33745	0.0094491	
Amplification Peak 10 - CN values	8q24.21 	chr8:128022833-129051939(probes 819296:820018)	chr8:128517808-128545382(probes 819650:819662)	chr8:112995902-146364022(probes 809796:829791)	1.1595e-11	 1.1595e-11		Actual Copy Change Given	0.60611	1.0609	0.47611	0.18313	0.34836	0.63463	0	2.8055	0.0012481	3.6569	0.30978	3.4748	1.4733	0.21637	0.67474	2.0244	-0.017254	0.1673	-0.11713	-0.0081624	3.3004	0.85173	3.6569	0.26042	1.4143	0.15382	-0.0067813	1.8597	0.38684	1.0111	0.79975	1.9386	0.80984	0.44465	1.1464	1.0853	1.2112	0.9202	1.451	2.6511	0.44291	0.57701	0.1382	1.5715	1.1815	0.60919	1.5635	3.6569	0.85254	0.013026	
Amplification Peak 11 - CN values	10p11.21	chr10:35335459-35408297(probes 921937:921958)  	chr10:35338674-35404274(probes 921938:921957)  	chr10:34795334-35745220(probes 921720:922068)  	0.018882	   0.018882		Actual Copy Change Given	-0.32774	0.029747	-0.188	-0.005261	0.040544	0.001803	-0.12148	0.045991	-0.0024938	-0.36254	-0.010203	0.58256	-0.01037	3.6569	0.38296	-0.47928	0.097688	-0.19475	0.49165	-0.31786	0.25137	0	-0.0027707	-0.023577	0.0076301	-0.043737	0.019643	-0.03643	3.4487	-0.13484	0.024127	0.84962	-0.00097017	-0.0053642	-0.41344	3.2554	1.0884	0.22602	0.70232	-0.41304	0.30889	-0.0042451	0.022444	0.40031	-0.020687	0.06537	0.58435	0.023706	0.65835	-0.044551	
Amplification Peak 12 - CN values	11p13   	chr11:34435171-36024467(probes 1000387:1001677)	chr11:35244059-35263023(probes 1001046:1001060)	chr11:34798611-35757903(probes 1000599:1001499)	0.046791	   0.051238		Actual Copy Change Given	0.048262	0.019643	-0.14222	0	-0.39758	0.040044	-0.029857	0.079303	-0.0051227	0.12029	-0.00038689	-0.10105	-0.020687	-0.22133	0.57469	-0.051524	0.27609	0.10439	0.042166	-0.32809	0.41982	-0.013689	0.0062012	0.19639	0.38734	0	-0.69269	-0.022744	-0.12147	-0.5164	0.14637	-0.099736	-0.72623	-0.44736	-0.40926	3.6569	-0.19675	1.214	-0.068663	3.6569	-0.22108	-0.15962	-0.93975	0.46113	-0.41487	-0.18232	-0.010817	0.85938	-0.36319	0.018663	
Amplification Peak 13 - CN values	11q13.3 	chr11:69523550-70248899(probes 1015255:1015619)	chr11:69940436-69993573(probes 1015459:1015489)	chr11:66622351-74723966(probes 1014099:1017924)	6.1399e-43	 6.1399e-43		Actual Copy Change Given	3.6569	0.019643	3.6569	2.1881	0.0035432	2.583	3.6569	0.079303	-0.0051227	-0.080725	3.6569	-0.10105	-0.020687	3.6569	0.98059	0.39605	0.27609	0.10439	0.11741	0.19381	0.6703	0.0088045	0.0062012	3.6569	-0.0084385	-0.026612	-0.69269	1.0525	-0.12525	3.6569	1.6385	-0.12797	3.6569	3.4571	-0.0099565	-0.051451	3.6569	0.1677	-0.068663	3.6569	2.4679	0.60774	3.6569	2.096	3.6569	3.6569	3.6569	3.6569	3.6569	3.6569	
Amplification Peak 14 - CN values	12p13.33	chr12:1-1071814(probes 1056037:1056115)           	chr12:1-1037228(probes 1056037:1056098)           	chr12:1-1866203(probes 1056037:1056243)           	0.014126	   0.022577		Actual Copy Change Given	-0.32484	1.1645	0.044266	0.20213	1.1021	0.040751	0.47187	-0.47258	-0.00027724	0.28733	-0.0067525	-0.0020784	-0.20871	0.71227	0.031295	0.40587	3.6569	0.10162	0.071966	0.021043	-0.39608	1.6118	0.019363	0.28531	-0.005261	0.21668	-0.66919	-0.65006	0.70401	1.974	0.53678	0.43648	-0.74011	0.00062872	1.3922	-0.38089	0.52818	0.51903	-0.051377	0.69123	0.11624	0.0051359	0.022444	0.87432	0.45241	-0.078278	1.1956	-0.097363	0.31923	3.6569	
Amplification Peak 15 - CN values	12p12.1 	chr12:24880663-25784000(probes 1070114:1070641)	chr12:24885718-25556703(probes 1070115:1070462)	chr12:24885718-25789332(probes 1070115:1070643)	0.099202	     0.1647		Actual Copy Change Given	-0.30512	1.1645	0.044266	0.046905	1.1155	0.50122	0.47187	3.6569	-0.00027724	0.27153	0.014359	0.066658	-0.20871	0.71227	0.019363	0.40587	-0.48628	0.10162	0.071966	0.0046276	-0.39608	1.5736	0.019363	0.28531	0.65645	0.27695	-0.67729	-0.57782	0.097833	2.2741	0.53678	0.44918	3.6569	0.00062872	1.2027	0.11469	0.52818	0.51903	-0.0528	0.69123	0.11624	0.01433	0.022444	0.39118	0.02287	0.35316	1.1805	-0.097363	0.35895	0.67994	
Amplification Peak 16 - CN values	17q24.3 	chr17:66364805-70596221(probes 1351175:1354229)	chr17:67413117-67669243(probes 1351862:1352019)	chr17:67311149-68036768(probes 1351807:1352229)	0.076179	   0.076179		Actual Copy Change Given	0.0020574	0.45275	0.043982	-0.058596	-0.0049343	0.02806	0.65866	-0.016292	-0.0027707	0.23886	0.12391	0	0.46622	0.30473	0.63408	-0.01167	0.072971	0.10351	0.060936	3.6569	1.4448	0.046611	1.6399	-0.0196	0.56187	0.12602	0.067518	0.5865	-0.083598	0.33238	-0.017529	-0.11678	-0.0079838	-0.0052259	0.38998	-0.0018014	0.28675	0.56733	-0.074277	0.29734	-0.036129	0.065083	1.0474	0.154	0.33221	0.11908	0.51819	-0.046854	0.019707	-0.029175	
Amplification Peak 17 - CN values	18p11.32	chr18:983189-2081265(probes 1358651:1359036)      	chr18:985109-1075852(probes 1358652:1358703)      	chr18:1-2087487(probes 1358528:1359038)           	0.011924	   0.011924		Actual Copy Change Given	-0.16001	0.041175	-0.22554	0.0087528	-0.39913	-0.089552	0.084643	0.047694	-0.0023553	1.6027	-0.016845	0.20687	-0.47818	-0.16879	-0.44084	0.39256	0.37397	-0.51012	-0.53713	-0.33399	-0.11241	-0.014865	-0.061017	0.36279	0.056228	0.32382	-0.70845	0.65093	3.5643	-0.10132	-0.26829	-0.072007	0.036794	-0.44972	0.44172	0.38056	-0.049559	1.1759	3.6569	3.6569	0.38733	0.1673	0.77252	-0.40416	-0.033787	0.30425	0.57723	0.0052749	0.014394	0.0091705	
Amplification Peak 18 - CN values	18q11.2 	chr18:20863588-22012348(probes 1367835:1368524)	chr18:20864023-20890717(probes 1367836:1367851)	chr18:19404300-22736415(probes 1367020:1369091)	0.0014244	  0.0014244		Actual Copy Change Given	0.61426	0.041175	-0.22554	0.0087528	-0.40126	-0.089552	3.5274	-0.46727	-0.0023553	-0.36083	-0.0070288	-0.18597	0.39761	-0.16879	1.3792	-0.04176	0.37397	1.412	-0.26131	2.9861	-0.11241	-0.014865	-0.061017	0.011946	1.32	0.46161	-0.7019	-0.015466	2.5703	-0.10132	0.32109	-0.03245	0.036794	0.018698	-0.41124	-0.36533	-0.049559	-0.046762	-0.0069195	-0.031902	-0.24387	0.1673	0.024127	-0.40059	-0.033787	0.30425	2.8943	0.0052749	0.014394	0.0091705	
Amplification Peak 19 - CN values	19p13.2 	chr19:7296453-7398264(probes 1403240:1403247)    	chr19:7300056-7397014(probes 1403241:1403246)    	chr19:7300056-7405648(probes 1403241:1403249)    	0.0032259	  0.0032259		Actual Copy Change Given	-0.021362	0.37907	0.073233	-0.016979	-0.16783	2.6784	0.024408	-0.49809	-0.0081948	-0.1336	1.2621	0.13613	-0.28396	0.074984	-0.079077	0.46051	0.013353	-0.22256	-0.22773	-0.0094046	-0.47881	0.082652	-0.093535	-0.13896	-0.060345	-0.344	-0.62312	-0.66836	0.15188	-0.47194	0.24653	-0.19662	-0.16026	-0.094294	1.4297	-0.048207	-0.12875	-0.13152	-0.16307	0.67876	-0.28013	-0.018078	-0.1092	2.5625	-0.15656	2.0354	-0.029857	-0.066654	3.6569	-0.097363	
Amplification Peak 20 - CN values	19q12   	chr19:29460241-35198907(probes 1411136:1415061)	chr19:31500860-31849727(probes 1412650:1412895)	chr19:30810086-31852223(probes 1412143:1412898)	0.095684	   0.095684		Actual Copy Change Given	0	0.37907	0.039165	-0.016979	-0.16783	-0.020865	0.024408	0.30937	-0.0026322	-0.11631	-0.040452	0.13613	-0.28396	0.074984	0.029888	-0.93278	0.034818	0.40878	0.58614	-0.0094046	0.39944	0.048314	-0.093535	-0.13896	1.231	0.73379	-0.62312	2.3075	0.15188	0.26812	0.24653	1.0804	-0.16026	-0.094294	-0.049965	3.0221	-0.12875	-0.11748	0.63161	-0.19642	1.2659	-0.018078	-0.1092	-0.37445	-0.15656	-0.42233	0.57755	0.25298	0.15658	-0.097363	
Amplification Peak 21 - CN values	Xp11.4  	chrX:40732423-40742477(probes 1516983:1516991)  	chrX:40732510-40742181(probes 1516984:1516990)  	chrX:40732510-40746768(probes 1516984:1516993)  	0.057199	   0.057199		Actual Copy Change Given	-0.14451	-0.55547	-0.40608	-0.39004	-0.0639	0.033549	0.016919	-0.2589	0.00597	-0.47082	-0.36031	0.013401	0.11404	0.050108	-0.29296	-0.23526	3.6569	-0.32158	-0.10276	-0.055903	0.046559	0.15404	-0.18081	-0.33988	-0.43734	-0.036538	-0.16547	0.10921	0.2456	-0.0083005	-0.64684	0.090285	-0.59614	-0.082767	0.028341	-0.48008	-0.52444	0.30724	-0.010922	0.15237	3.0061	-0.32469	-0.22418	-0.48542	-0.24326	0.089416	0.25636	-0.18068	3.6569	-0.059269	
Deletion Peak  1 - CN values	1p35.2  	chr1:1-249250621(probes 1:129193)                   	chr1:32081900-32113450(probes 15143:15160)          	chr1:32089952-32093631(probes 15146:15147)          	0.23807	    0.23807		Actual Copy Change Given	-1.2247	-0.53977	0.049548	0.20763	0.039988	0.066229	-0.2319	-0.46855	-0.0011519	-0.14456	0.19744	0	0.036088	-0.29023	-0.045093	-0.45845	-0.20124	-0.19754	-0.23745	-0.31984	0.027993	0.022777	-0.032178	0.34875	0.12152	-0.049965	0.027919	-0.080275	-0.33952	0.21906	-0.42976	0.36461	0	0.0082312	-0.0098185	-0.020824	-0.12434	0.097786	-0.037354	0	-0.25842	0.1428	-0.018153	0.049853	-0.091155	-0.058506	-0.00046673	0.012065	-0.042183	-0.013402	
Deletion Peak  2 - CN values	1q44    	chr1:178641946-249250621(probes 85406:129193)     	chr1:245911868-247052144(probes 128538:128764)    	chr1:246037293-246037919(probes 128652:128653)    	0.15791	    0.15791		Actual Copy Change Given	0.045453	0.51059	0.26621	0.027778	0.36207	0.066515	0.93162	-0.14554	0.0063871	0.64959	0.27319	0	0.00356	0.53186	0.21945	0	0.089272	-0.16637	0.69964	0.015308	0.6495	0.83121	-0.82187	0.92248	1.1033	-0.3112	0.69447	-0.0099565	-0.054151	0.44801	-0.27464	1.3792	-0.01772	-0.0072429	-0.38817	0.0066653	0.036935	0.45647	0.67474	1.4152	0.2839	-0.037343	-0.88062	0.76949	0.29872	0.28644	-0.039801	-0.32368	-0.038707	0.60991	
Deletion Peak  3 - CN values	2q22.1  	chr2:139655617-143637838(probes 201408:203838)    	chr2:140976294-142894275(probes 202130:203401)    	chr2:141580205-142143404(probes 202476:202821)    	2.3877e-07	 2.1318e-06		Actual Copy Change Given	-0.99318	1.0604	-0.40597	0.015308	-0.40931	-0.54007	-0.64085	0.095363	0.0020805	-0.22051	-0.41353	-0.3617	-0.0067813	-0.73134	0.3512	0.31507	0.01422	-0.52696	0.071104	0.057796	0.44833	-0.037929	0.018442	0.63989	-0.0060904	0.13362	-0.00027724	1.2078	0.0068044	0.0084522	0.33341	-0.077345	0.060079	-0.0019047	-0.016154	0.2456	0.15606	0	0.092605	-0.023017	0.33513	0	-0.91055	-0.053314	-0.066118	0.011958	0.0029133	0.0029111	0.33698	0.0068044	
Deletion Peak  4 - CN values	2q37.2  	chr2:192813454-243199373(probes 231829:260552)    	chr2:236401743-237043138(probes 257006:257400)    	chr2:227199264-243199373(probes 251646:260552)    	0.075756	    0.18982		Actual Copy Change Given	-0.052531	-0.12739	-0.1315	0.015308	-0.82525	-0.13549	-0.15707	0.082621	0.0020805	0.24532	0.003584	0.01433	0	-0.15042	-0.0011087	0.3002	-0.0092666	0.072684	0.071104	0.057796	0.41697	-0.0034113	0	-0.0070692	-0.0085119	0.12609	0.00069327	-0.067993	-0.33883	-0.015879	-0.44264	-0.09446	-0.75728	0.00072844	-0.011749	0.34469	0.057796	-0.049874	0.051245	-0.43803	-0.28478	0	0.016705	-0.4211	0.3179	0.00068901	-1.2929	0.016286	0.33698	0.00013863	
Deletion Peak  5 - CN values	3p14.2  	chr3:59034763-61547330(probes 293464:294359)        	chr3:59702822-61238217(probes 293972:294173)        	chr3:61027858-61268120(probes 293978:294191)        	1.1049e-05	 1.2357e-05		Actual Copy Change Given	-0.70926	-0.45125	-0.4366	-0.21379	-0.40589	-0.17474	-0.52827	-0.45163	0.00013863	-0.34577	-0.34053	-0.064556	-0.13393	-0.30534	-0.43173	-0.48496	-0.48925	-0.68997	-0.12082	-0.32054	-0.45104	-0.0045181	-0.78058	-0.68372	-0.0059522	-0.23753	-1.2929	-0.62751	0.42974	-0.54502	-0.42765	-0.055364	-0.72558	-0.45112	-0.41871	-0.37358	0.35904	-0.9169	-0.75461	-0.0050353	-0.29047	-0.2906	-0.92354	-0.82878	-0.42855	-0.32234	-0.64481	-0.31646	-0.37161	-0.71453	
Deletion Peak  6 - CN values	3q11.1  	chr3:70016017-93778057(probes 300627:311500)        	chr3:90485637-93778057(probes 311488:311500)        	chr3:74611544-93740691(probes 303826:311491)        	0.030052	    0.18982		Actual Copy Change Given	0.84061	0.6618	0.12444	0.42284	0.3344	-0.17474	1.524	0.83707	0.00013863	1.0125	0.96771	-0.064556	-0.13122	1.0521	-0.048748	0.45863	0.10512	0.0019397	-0.066654	-0.011426	-0.44823	-0.0045181	0.011818	1.5828	-0.0047079	0.18268	0.020343	0.023005	0.04954	0.6831	0.52293	0.45207	0.81532	0.62501	0.39297	0.22746	0.35953	0.54236	0.035947	0.72747	0.084354	0.01447	-0.92354	0.75895	0.34634	0.24498	0.016425	0.38023	-0.35117	0.68887	
Deletion Peak  7 - CN values	3q26.31 	chr3:173999806-175760559(probes 354935:355679)    	chr3:174575145-175760559(probes 355290:355679)    	chr3:174889888-174893774(probes 355485:355486)    	0.043481	   0.043213		Actual Copy Change Given	0.86235	0.68775	0.12444	1.0934	0.3344	0.37331	1.5779	0.6554	0.00013863	0.95993	1.001	-0.064556	1.1685	1.2994	-0.91266	1.3775	0.096538	0.60684	-0.065179	0.024127	-0.14592	-0.014452	0.011818	0.93975	-0.96287	0.18268	0.016985	-0.54391	1.5955	0.95201	1.4486	0.44613	0.82725	0.54605	0.42939	0.20076	0.87827	0.54236	0.040292	0.72466	0.31546	0.01447	2.6754	0.77776	1.2136	0.83713	1.8198	0.38023	0.77146	0.59836	
Deletion Peak  8 - CN values	4p15.2  	chr4:1-31150140(probes 366976:385768)                	chr4:20727465-21952452(probes 379034:379957)        	chr4:21362709-21364310(probes 379496:379497)        	0.12884	     0.1296		Actual Copy Change Given	-0.31552	-0.46259	-0.14762	-0.36929	-0.0013737	-0.17537	-0.23985	-0.48355	-0.0036983	-0.34462	-0.0067525	-0.17454	-0.02384	-0.038538	0.1595	0.45132	-0.17474	-0.84587	0.040468	-0.32405	0.008339	-0.011698	-0.43918	-0.37303	0.74708	-0.35396	0	0.0090312	-0.27663	0.21022	-0.43489	-0.63699	-0.71897	-0.45187	0.0027745	-0.012024	-0.40318	-0.054165	-1.2929	-0.059319	0.075847	-0.13871	-0.93282	-0.40576	-0.44642	-0.10618	-0.018902	0.012237	-0.3799	-0.73398	
Deletion Peak  9 - CN values	4q22.1  	chr4:90844993-93240505(probes 416882:418039)        	chr4:91148280-91705651(probes 416980:417302)        	chr4:91380058-91628739(probes 417117:417253)        	0.00057432	 0.00057432		Actual Copy Change Given	-0.31552	-0.46259	-0.11419	0.20121	0.71087	-0.068663	-0.080807	-1.0437	0.0029133	-0.28684	0.0036366	-0.17454	-0.02384	0.17046	-0.088507	-0.91976	-0.17474	-0.20361	0.040468	-0.31704	0.041034	-0.011698	-0.073801	0.025659	-0.056307	0.10176	0	0.043157	-0.63225	0.06458	-0.413	-0.065716	-0.69251	-0.0092316	-0.40771	-0.022469	-0.42931	0.017918	-0.72659	-0.048786	-0.23361	0.0094962	-0.92507	-0.40714	0.034083	-0.10618	0.0026357	0.012237	-0.32013	0.11184	
Deletion Peak 10 - CN values	5q11.2  	chr5:58260298-59787985(probes 500860:501804)        	chr5:58260298-59787985(probes 500860:501804)        	chr5:58626130-58923848(probes 501120:501359)        	0.00015226	  0.0016797		Actual Copy Change Given	-0.70702	-0.4732	-0.42125	-0.039258	-0.41492	0.47856	0.26577	-0.48911	0.0012481	-0.29572	-0.32075	0.14028	-0.46302	0.27963	0.16055	-0.44926	0.10089	-0.20796	-0.13975	-0.33272	-1.2929	-0.010319	-0.80194	-0.67399	-0.051316	-0.34159	-0.69804	-0.0049844	-0.65631	-0.14181	-0.4256	-0.081871	0.073833	-0.44829	0.020063	0.08739	-0.44566	-0.40996	-0.75739	-0.87645	-0.30616	-0.071472	-0.85686	0.39865	-0.40628	0.050677	0.004719	-0.29071	0.0067292	-0.71223	
Deletion Peak 11 - CN values	5q12.3  	chr5:59884318-94417957(probes 501861:520054)        	chr5:65889312-66468313(probes 504916:505374)        	chr5:66162398-66163508(probes 505146:505147)        	0.0057526	   0.049849		Actual Copy Change Given	-0.70702	-0.4732	-0.42125	-0.039258	-0.41492	-0.17018	0.26577	-0.48911	0.0012481	-0.35206	-0.32075	0.081177	-0.46302	-0.014641	0.026233	-0.47294	0.0913	-0.20796	-0.18358	-0.31669	-0.4627	-0.010319	-0.80194	-0.67399	-0.061555	-0.34159	-0.69804	0.00097064	-0.65631	-0.14181	-0.4355	-0.081871	-0.70298	-0.44829	0.020063	0.08739	-0.45276	-0.40996	-0.75739	-0.87645	-0.31767	-0.071472	-0.85686	0.39865	-0.40628	0.050677	0.004719	-0.29071	0.0067292	-0.7257	
Deletion Peak 12 - CN values	6p25.3  	chr6:1608837-2250882(probes 570829:571248)            	chr6:1621405-2177023(probes 570832:571202)            	chr6:1716711-2256626(probes 570913:571251)            	0.0015269	  0.0015269		Actual Copy Change Given	-0.32996	-0.045228	0.032398	-0.0016629	0.054879	0	-0.60771	-0.49726	0.0013868	-0.35583	0.0034978	-0.18174	-0.77464	-0.16717	0	-0.47801	0.09159	0.099288	0	-0.31529	0.022444	0.0072735	0.0026135	0.33301	-0.74037	-0.16632	-0.69785	-0.62541	-0.26347	0.085677	-0.21849	1.3357	0.038206	-0.95266	-0.011198	-0.38392	0.1619	0.25506	0.0026357	-0.9157	-0.26023	0.15681	0.98701	0.012405	-0.43474	-0.098418	-0.0095426	-0.0023553	0.0051997	-0.041702	
Deletion Peak 13 - CN values	6q26    	chr6:64422985-171115067(probes 605233:666855)      	chr6:161767520-163153207(probes 662475:663085)    	chr6:162127515-162136158(probes 662781:662782)    	0.16543	    0.16875		Actual Copy Change Given	-0.31377	-0.47529	0.051221	-0.0016629	-0.0932	-0.078943	0.027497	1.1149	0.0013868	-0.030729	-0.0060615	-0.18177	0.1311	-0.03245	-0.0092666	-0.49959	-0.49246	0.097202	0.011261	0.0066653	-0.034011	-0.007973	0.061079	-0.016166	1.2047	-0.041974	-0.019385	-0.024661	-0.3105	0.25699	-0.30529	0.46109	0.041175	0.0051711	0.51699	0.0020805	-0.48218	0.40189	0	0.77053	-0.2491	-0.15738	-0.0015243	-0.21005	-0.43918	-0.20378	-0.024661	-0.31304	-0.0075429	0.0037465	
Deletion Peak 14 - CN values	7q31.1  	chr7:109599468-111366370(probes 722557:723258)    	chr7:110236682-111354928(probes 722973:723252)    	chr7:110437436-111426681(probes 723063:723301)    	1.1053e-06	 1.1053e-06		Actual Copy Change Given	0.053521	1.2825	-0.14839	-0.005814	-1.2929	-0.18865	0.042166	-1.1194	0.001803	0.31348	-0.34122	-0.18043	-0.034495	0.28248	-1.0103	0.85691	0.058224	0.65026	-0.21354	0.3395	0.9744	-0.0057626	0.049966	-0.66652	-0.03681	0.13495	0.0030522	0.052241	-0.4108	0.18298	0.27726	0.9302	0.04259	-0.45037	1.2045	0.56205	-0.43398	0.62855	0.78074	0.35865	-0.2192	-0.12421	-0.94391	1.1495	0.44636	-0.64678	-0.012024	0.0075	-0.32458	0.71979	
Deletion Peak 15 - CN values	8p23.2  	chr8:2079140-6262191(probes 748953:750804)            	chr8:2784419-4854274(probes 749001:750425)            	chr8:3520602-3544535(probes 749714:749715)            	0.13798	    0.13798		Actual Copy Change Given	0.361	0.99343	-0.40541	0.20748	-0.41074	0.18374	-0.51177	-0.51681	0.0012481	-0.10715	-0.32179	0.20733	1.4155	0.21637	-0.2396	-0.53281	0.082765	-0.51712	-0.20535	0	-0.52292	0.8193	3.6569	0.26042	1.6225	-0.34021	-0.0067813	-0.028491	0.33865	-0.53571	-0.0013858	-0.13251	-0.74412	-0.45701	-0.031496	-0.040752	-0.0696	-0.40399	0.68477	0.39662	-0.21958	0.51821	-0.94054	-0.41386	-0.45704	-0.31961	-0.023429	-0.30803	-0.032054	-0.026167	
Deletion Peak 16 - CN values	9p21.3  	chr9:21865498-21997722(probes 843232:843296)        	chr9:21959052-21997722(probes 843283:843296)        	chr9:21410163-25773011(probes 842955:845649)        	2.2929e-48	 2.2929e-48		Actual Copy Change Given	-0.68524	0.016705	-0.67584	-0.635	-1.0085	-0.1827	-0.3933	-0.47818	-0.0030014	-0.30268	-0.75382	-0.18433	-0.011473	-0.87767	-0.47067	-1.2929	-0.47427	0.072109	-0.26384	0.015028	-0.95377	-0.015616	0.037641	-1.2929	-0.73047	-0.32913	-0.69866	0.00069327	0.10614	-1.2929	-1.2132	-0.62998	-1.2929	-0.90713	-1.1814	-0.74011	-0.49642	-1.053	-1.2929	2.1261	-0.87377	-0.29319	-1.2929	-1.1688	-1.2595	-0.95384	-1.1841	-0.61095	-1.0525	-1.2929	
Deletion Peak 17 - CN values	10p11.21	chr10:34059131-35328087(probes 921189:921928)      	chr10:34597962-35128523(probes 921599:921909)      	chr10:34865759-34867204(probes 921755:921756)      	0.0048136	  0.0048136		Actual Copy Change Given	-0.32774	0.029747	-0.188	-0.005261	0.040544	0.001803	-0.12148	0.045991	-0.0024938	-0.36254	-0.010203	0.58256	-0.01037	-0.14005	0.38296	-0.47928	0.097688	-0.19475	0.49165	-0.31786	0.25137	0	-0.0027707	-0.023577	0.0076301	-0.043737	0.019643	-0.03643	3.4487	-0.13484	0.024127	1.8456	-0.00097017	-0.0053642	-0.41344	3.6569	1.0884	-0.11669	0.70232	-0.41304	0.30889	-0.0042451	0.022444	-0.40791	-0.020687	0.06537	0.58435	0.023706	0.65835	-0.044551	
Deletion Peak 18 - CN values	10q23.31	chr10:89617158-90533234(probes 950047:950723)      	chr10:89617402-89735596(probes 950048:950236)      	chr10:89679047-89679099(probes 950143:950144)      	0.00016773	 0.00016773		Actual Copy Change Given	-0.32774	-0.09721	-0.188	-0.005261	-0.39679	0.001803	0.33788	0.048972	-0.0024938	-0.35492	-0.010203	-0.19174	0.0038854	-0.11822	-0.022195	-0.31359	-0.14129	-0.1911	0.46843	-0.31786	-0.46462	0.0044927	-0.80335	-0.0083121	0.024969	-0.51805	0.019643	0.0029133	-0.82423	-0.116	0.024127	-0.64311	-0.71399	-0.0053642	-0.016567	-0.0029091	-0.52194	0.22602	-0.022058	0.35116	-0.06048	-0.0026322	-0.86916	-0.38926	-0.43702	0.12756	-0.0029091	-0.32437	-0.37209	0.56561	
Deletion Peak 19 - CN values	11p15.4 	chr11:3872464-4115961(probes 979922:980060)          	chr11:3872464-4115961(probes 979922:980060)          	chr11:3999073-4001007(probes 979992:979993)          	0.036223	   0.036223		Actual Copy Change Given	0.048262	0.019643	-0.14222	0	-0.39758	0.040044	0.026373	0.089416	-0.0051227	-0.37824	-0.00038689	-0.19812	-0.020687	-0.22133	-0.048748	-0.031008	-0.22108	0.11884	0.042166	-0.33225	-0.50079	-0.013689	0.0062012	0.25729	-0.020961	-0.34033	-0.68606	-0.051586	-0.12147	-0.5164	-0.22932	-0.064911	-0.72623	-0.44736	-0.40926	-0.38055	-0.218	-0.078188	-0.12082	0.64444	0.034818	-0.14926	-0.099876	-0.32806	-0.43973	-0.23472	-0.035585	-0.011198	-0.44801	0.018663	
Deletion Peak 20 - CN values	11q24.3 	chr11:111284730-135006516(probes 1040232:1056036)	chr11:130090905-130190620(probes 1053539:1053581)	chr11:130134442-130192973(probes 1053557:1053585)	0.13798	    0.13798		Actual Copy Change Given	0.03214	0.019643	0.010818	-0.0042929	0.04295	-0.18798	-0.48739	-0.40639	-0.0051227	-0.024336	-0.33639	-0.18584	-0.020687	-0.18295	-0.88264	-0.055422	0.27609	0.099724	-0.19675	0.32295	0.6703	-0.011973	0.016845	-0.62466	-0.0094288	-0.33818	-0.69269	0.54896	-0.12525	-0.53195	-0.51414	-0.064911	-1.2929	-0.43537	-0.0012473	-0.054041	-0.5096	-0.062673	0.0096848	-0.57129	-0.25043	-0.0081624	3.6569	-0.42863	-0.42855	-0.48239	-0.040888	-0.3341	-0.37898	-0.72296	
Deletion Peak 21 - CN values	13q14.2 	chr13:1-115169878(probes 1130014:1186689)         	chr13:48984816-48992809(probes 1148781:1148791)    	chr13:48936047-48997006(probes 1148724:1148795)    	0.21234	    0.21437		Actual Copy Change Given	0.050819	-0.42598	-0.148	-0.40473	-0.83304	-0.014366	0.032281	-0.20099	-0.0023553	-0.32859	-0.31562	0.21637	0.79549	0.047836	1.6118	-0.053669	0.10599	-0.24131	-0.17613	0.63463	-0.0066432	0.72742	-0.45522	-0.14748	-0.05752	0.011679	0.65001	0.56507	-0.23031	-0.53885	-0.43084	-1.1992	-0.72659	-0.40372	-0.41121	-0.0083005	-0.45394	-0.19829	-0.34102	-1.2929	-0.25041	-0.0099565	0.016845	-0.045065	-0.41586	-0.11024	-0.13484	-0.30122	-0.38185	0.001803	
Deletion Peak 22 - CN values	15q13.1 	chr15:1-60692978(probes 1236160:1256381)           	chr15:28097279-31135788(probes 1238833:1238847)    	chr15:28482239-28488887(probes 1238841:1238842)    	0.23049	    0.22621		Actual Copy Change Given	0.018108	-0.32751	-0.014802	0.0036076	0.024904	-0.17992	-0.022744	-1.062	-0.0008316	0.24134	-0.032286	0.2058	-0.052396	-0.065447	-0.44997	-0.023076	-0.1866	-0.1803	-0.055773	-0.31657	-0.47575	0.023618	-0.0088357	-0.3809	-0.017529	-0.03395	-0.047936	-0.014641	0.35839	0.31643	0.42464	-0.60458	-0.0045695	0.010181	0.0030522	0.097397	-0.14129	-0.075255	-0.023977	-0.066435	0.73929	-0.0031859	0.012795	-0.37795	0.041498	-0.097232	-0.0084385	-0.31646	0.32583	-0.73784	
Deletion Peak 23 - CN values	16q23.1 	chr16:78129058-79627770(probes 1313937:1315301)    	chr16:78129058-79247026(probes 1313937:1314949)    	chr16:78563833-79002430(probes 1314414:1314633)    	2.4425e-10	 2.4425e-10		Actual Copy Change Given	0.0065262	-0.5038	0.36327	-0.0013858	0.024202	-0.19737	0.094491	-1.2929	-0.0070576	-0.10225	0.04744	-0.63699	-0.012523	0.19178	-0.21268	0.42059	-0.48628	-0.50409	-1.1674	0.29835	0.11991	-0.036487	-1.2929	-0.0038895	-0.17158	0.12697	-0.035721	-0.02384	-1.2929	-0.49246	0.0026605	-0.087579	-0.0085766	0.0010058	-0.34698	-0.014778	0.26828	0.58254	-0.072274	-0.85752	-0.33422	-0.01409	-0.0039891	-0.36904	-0.044009	0.19801	-0.06142	-0.0024938	0.28793	-0.039937	
Deletion Peak 24 - CN values	17q24.3 	chr17:70116519-71163787(probes 1353859:1354703)    	chr17:70583958-70640081(probes 1354226:1354261)    	chr17:70609867-70615446(probes 1354244:1354245)    	0.1113	     0.1166		Actual Copy Change Given	0.0020574	0.45275	0.043982	-0.058596	-0.0049343	0.02806	0.65866	-0.016292	-0.0027707	0.23886	0.10851	0	0.46622	0.30473	0.63408	-0.01167	0.066229	0.10351	0.060936	-0.31634	0.0079175	0.046611	-0.88403	-0.018639	0.56187	0.12602	0.067518	1.1221	-0.23506	0.33238	-0.017529	-1.2929	-0.0079838	-0.0052259	-1.2929	-0.0018014	0.28675	0.54002	-0.074277	0.29734	-0.036129	0.065083	1.0474	0.154	0.33221	0.11908	0.51819	-0.046854	0.019707	-0.029175	
Deletion Peak 25 - CN values	18q12.2 	chr18:35235531-39060470(probes 1376780:1379058)    	chr18:36783539-37333360(probes 1377790:1378026)    	chr18:37108839-37114064(probes 1377909:1377910)    	0.037051	   0.036223		Actual Copy Change Given	0.61426	0.041175	-0.22554	0.0087528	-0.40126	-0.089552	0.09856	-0.46727	-0.0023553	-0.36083	-0.0070288	-0.18597	0.39761	-0.16879	-1.2929	-0.050969	-0.47934	-0.50525	-0.42309	-0.66309	-0.19762	-0.014865	-0.061017	0.024536	0.61952	-0.32421	-0.7019	-0.0022168	-0.6783	-0.53276	-0.091287	0.013213	-0.70064	-0.44563	-0.41124	-0.37121	-0.48407	-0.046762	-0.8222	-0.031902	-0.26396	0.1673	0.075271	-0.40059	-0.033787	0.30425	-0.0080244	-0.31709	-0.35265	0.0091705	
Deletion Peak 26 - CN values	19q13.31	chr19:44038462-46149617(probes 1418879:1419975)    	chr19:45009978-45042764(probes 1419531:1419543)    	chr19:44958193-46154731(probes 1419491:1419977)    	0.026815	   0.026341		Actual Copy Change Given	0	0.37907	-0.065007	-0.023732	-0.16783	-0.020865	0.024408	0.30937	-0.0026322	-0.11631	-0.040452	0.13613	-0.28396	0.074984	0.029888	-1.2929	0.034818	0.39546	0.58614	-0.0094046	0.39944	0.048314	-0.091972	-0.13896	0.55673	0.25746	-0.62312	0.51769	0.15188	0.26812	0.24653	-0.15822	-0.16345	-0.094294	-0.049965	-0.33491	-0.12875	-0.11748	0.50776	-0.19642	-0.27488	-0.018078	-0.99367	-0.37445	-0.15656	-0.0081624	-0.018078	-0.05496	-0.46414	-0.097363	
Deletion Peak 27 - CN values	20p12.1 	chr20:14302876-16252980(probes 1433974:1435164)    	chr20:13965126-16036135(probes 1433808:1434945)    	chr20:15466270-15467074(probes 1434377:1434378)    	0.0035188	  0.0035188		Actual Copy Change Given	1.1762	0.47787	0.30279	0.003191	0.3734	0.34909	-0.014576	-1.2929	-0.0092666	0.29415	0.78026	0.19269	0.40944	0.2958	0.099483	0.81875	-0.48102	0.13288	-0.23276	0.65811	-0.48229	0.015639	0.0043021	0.10773	1.1793	-0.3371	0.68701	1.1277	-0.026851	0.13969	0.015866	-0.029857	-0.72729	0.0032262	-0.40528	0.28074	0.17664	0.41692	-0.040752	-0.0080751	-0.01409	0.55478	-0.93651	0.37598	-0.018325	0.79878	-0.026851	0.060651	0.30711	-0.0023963	
Deletion Peak 28 - CN values	21q22.2 	chr21:36154821-48129895(probes 1475658:1483064)    	chr21:42546731-42562930(probes 1480368:1480374)    	chr21:42547895-42633899(probes 1480370:1480443)    	0.18982	    0.18982		Actual Copy Change Given	-0.72694	0.032281	-0.10371	-0.2005	0.77647	-0.17689	-0.48928	-1.051	-0.0073943	-0.36345	-0.0032382	-0.19575	-0.47046	-0.28928	0.025531	-0.48044	-1.0412	-0.50194	0.10176	-0.31809	-0.47067	0.043634	-0.20466	-0.68147	-0.015329	0.020343	-0.68979	-0.051451	-0.6867	-0.5118	-0.43192	1.3235	-0.034086	-0.44919	-0.40329	0.0023581	-0.59507	-0.11878	0.1664	0.77316	0.083776	-0.30251	0.016022	0.27241	-0.077583	-0.1779	-0.013402	-0.032178	-0.36788	-0.0026322	
Deletion Peak 29 - CN values	22q11.1 	chr22:1-18275090(probes 1483065:1483559)           	chr22:1-17752793(probes 1483065:1483247)           	chr22:1-17990605(probes 1483065:1483394)           	0.070922	   0.075756		Actual Copy Change Given	-0.013264	0.44833	0.55103	0.21499	-0.40046	0.027216	-0.19475	-0.17335	-0.0047079	-0.10229	-0.038821	-0.23214	0.43344	0.1283	-0.37741	0.44233	0.063509	-0.13807	-0.050776	-0.32797	-0.50463	-0.065263	-0.067327	0.35086	-0.76141	-0.078144	-0.67912	-0.078677	-1.0464	-0.051181	-0.25067	-0.13018	-0.085457	-0.0060554	-1.2929	0.34242	-0.19687	-0.096879	-0.10762	-0.066971	-0.53835	-0.15093	-0.064106	0.25827	0.68217	-0.2281	0.57219	0.028903	0.28445	-0.043195	
Deletion Peak 30 - CN values	Xp21.1  	chrX:30870233-32661893(probes 1512563:1513596)      	chrX:30870233-32181326(probes 1512563:1513270)      	chrX:31637697-31844447(probes 1512884:1513014)      	1.3068e-05	 1.7769e-05		Actual Copy Change Given	-0.14451	-0.55547	-0.43113	-0.39004	-0.0639	0.022304	0.031577	-1.2929	0.00597	-0.47082	-0.36031	0.013401	0.10205	0.058031	-0.31459	-0.4637	0.09101	-1.2929	-0.10276	-0.055903	-1.2929	0.15404	-0.90957	-0.33988	-0.43734	-0.036538	-0.16637	0.1385	0.2456	-0.0083005	-0.64684	0.073115	-0.59614	-0.082767	0.028341	-0.48008	-0.48617	0.30724	-0.010922	0.15237	-0.014563	0.3348	-0.23618	-0.48542	-0.24326	0.089416	0.25636	-0.1093	0.015372	-0.059269	
Deletion Peak 31 - CN values	Xp11.3  	chrX:44702452-45008304(probes 1518680:1518802)      	chrX:44729401-44977416(probes 1518690:1518789)      	chrX:44837463-44850232(probes 1518740:1518741)      	0.028351	   0.087117		Actual Copy Change Given	-0.060883	-0.55547	-0.40608	-0.39004	-0.0639	-0.39608	0.016919	-0.2589	0.00597	-0.47082	-0.36031	0.013401	0.11404	0.050108	-0.29296	-0.23526	1.4075	-0.32158	-0.10276	-0.055903	0.046559	0.15404	-0.18081	-0.33988	-0.43734	-0.036538	-0.16547	0.083198	0.2456	-0.0045695	-0.64684	3.6569	-0.59614	-0.082767	0.028341	-0.48008	-0.52444	0.30724	-0.010922	0.15237	-1.0758	-0.32469	-0.22418	-0.48542	-0.24326	0.089416	0.25636	-0.14379	0.0096523	-0.059269	
Deletion Peak 32 - CN values	Xq21.33 	chrX:96134519-98718611(probes 1536684:1538110)      	chrX:95939207-96856298(probes 1536580:1537048)      	chrX:96328149-96329450(probes 1536815:1536816)      	0.017061	   0.016785		Actual Copy Change Given	-0.060883	0.40844	0.055063	-0.0071031	-0.0639	0.3653	0.00626	0.33561	0.0032958	0.26398	0.27435	0.0076392	0.11404	0.050108	-0.31003	0.36876	-0.48596	0.17845	0.87508	-0.055903	-0.018129	0.15404	-0.18299	-0.35123	0.69821	-0.036538	-0.16547	0.083198	-0.20274	-0.033488	0.54308	0.44003	-0.59614	-0.082767	0.018523	0.47718	0.35545	-0.079218	-0.010922	0.15679	-1.2026	0.30697	-0.22418	0.37977	-0.24326	0.089416	0.25324	-0.13248	-0.86118	-0.061727	
