
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Clusters_onlysig.81.4078/Clusters2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Clusters_onlysig.81.4078/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/423674/KIRC-TP.mutsig.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPicker/KIRC-TP/3351227/KIRC-TP.clin.merged.picked.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"  "-oT="
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=502, in cluster file=293, common to both=293
[1]  10 293
[1] "PBRM1 MUTATION ANALYSIS"
[1] 3
  PBRM1 MUTATED PBRM1 WILD-TYPE 
            107             186 
  PBRM1 MUTATED PBRM1 WILD-TYPE 
            107             186 
[1] "SV2C MUTATION ANALYSIS"
[1] 3
  SV2C MUTATED SV2C WILD-TYPE 
             3            290 
  SV2C MUTATED SV2C WILD-TYPE 
             3            290 
[1] "VHL MUTATION ANALYSIS"
[1] 3
  VHL MUTATED VHL WILD-TYPE 
          138           155 
  VHL MUTATED VHL WILD-TYPE 
          138           155 
[1] "BAP1 MUTATION ANALYSIS"
[1] 3
  BAP1 MUTATED BAP1 WILD-TYPE 
            27            266 
  BAP1 MUTATED BAP1 WILD-TYPE 
            27            266 
[1] "SETD2 MUTATION ANALYSIS"
[1] 3
  SETD2 MUTATED SETD2 WILD-TYPE 
             34             259 
  SETD2 MUTATED SETD2 WILD-TYPE 
             34             259 
[1] "KDM5C MUTATION ANALYSIS"
[1] 3
  KDM5C MUTATED KDM5C WILD-TYPE 
             18             275 
  KDM5C MUTATED KDM5C WILD-TYPE 
             18             275 
[1] "TP53 MUTATION ANALYSIS"
[1] 3
  TP53 MUTATED TP53 WILD-TYPE 
             6            287 
  TP53 MUTATED TP53 WILD-TYPE 
             6            287 
[1] "PTEN MUTATION ANALYSIS"
[1] 3
  PTEN MUTATED PTEN WILD-TYPE 
             9            284 
  PTEN MUTATED PTEN WILD-TYPE 
             9            284 
[1] "EBPL MUTATION ANALYSIS"
[1] 3
  EBPL MUTATED EBPL WILD-TYPE 
             6            287 
  EBPL MUTATED EBPL WILD-TYPE 
             6            287 
[1] "TOR1A MUTATION ANALYSIS"
[1] 3
  TOR1A MUTATED TOR1A WILD-TYPE 
              3             290 
  TOR1A MUTATED TOR1A WILD-TYPE 
              3             290 
[1] "data2feature, selection=ALL"
 [1] "YEARSTOBIRTH"                          
 [2] "DAYSTODEATH"                           
 [3] "DAYSTOLASTFOLLOWUP"                    
 [4] "VITALSTATUS"                           
 [5] "DCCUPLOADDATE"                         
 [6] "PRIMARYSITEOFDESEASE"                  
 [7] "GENDER"                                
 [8] "DATEOFINITIALPATHOLOGICDIAGNOSIS"      
 [9] "DAYSTOLASTKNOWNALIVE"                  
[10] "KARNOFSKYPERFORMANCESCORE"             
[11] "HISTOLOGICALTYPE"                      
[12] "RADIATIONS.RADIATION.REGIMENINDICATION"
[13] "NUMBERPACKYEARSSMOKED"                 
[14] "YEAROFTOBACCOSMOKINGONSET"             
[15] "DISTANT.METASTASIS"                    
[16] "LYMPH.NODE.METASTASIS"                 
[17] "TUMOR.STAGECODE"                       
[18] "NEOPLASM.DISEASESTAGE"                 
[19] "BATCHNUMBER"                           

Input Data has 19 rows and 293 columns.

[1] "Batch" "19"   
[1] "Last Follow UP"
TCGA-A3-3308 TCGA-A3-3311 TCGA-A3-3316 TCGA-A3-3317 TCGA-A3-3319 TCGA-A3-3320 
          16         1190         1493         1491         1130         1508 
TCGA-A3-3322 TCGA-A3-3323 TCGA-A3-3324 TCGA-A3-3326 TCGA-A3-3346 TCGA-A3-3347 
        1477         1105         1186         1137          137         1097 
TCGA-A3-3349 TCGA-A3-3351 TCGA-A3-3357 TCGA-A3-3358 TCGA-A3-3362 TCGA-A3-3363 
        1385          910         1425         1307         1559          319 
TCGA-A3-3365 TCGA-A3-3367 TCGA-A3-3370 TCGA-A3-3372 TCGA-A3-3373 TCGA-A3-3376 
         872         1054          776          735          334         1070 
TCGA-A3-3378 TCGA-A3-3380 TCGA-A3-3382 TCGA-A3-3383 TCGA-A3-3385 TCGA-A3-3387 
         630          567          574          861          726          616 
TCGA-AK-3429 TCGA-AK-3430 TCGA-AK-3436 TCGA-AK-3444 TCGA-AK-3451 TCGA-AK-3455 
        2017          480         2043         1471         1481          683 
TCGA-AK-3456 TCGA-AK-3458 TCGA-AS-3778 TCGA-B0-4700 TCGA-B0-4706 TCGA-B0-4710 
          46         1168           NA           NA           26            5 
TCGA-B0-4712 TCGA-B0-4810 TCGA-B0-4811 TCGA-B0-4815 TCGA-B0-4816 TCGA-B0-4818 
        1337          266         1196         1491         1081          426 
TCGA-B0-4823 TCGA-B0-4827 TCGA-B0-4842 TCGA-B0-4852 TCGA-B0-4945 TCGA-B0-5075 
         454          884         1636         1079         2145          608 
TCGA-B0-5077 TCGA-B0-5080 TCGA-B0-5081 TCGA-B0-5085 TCGA-B0-5088 TCGA-B0-5092 
        1291          222          233          769          433          459 
TCGA-B0-5094 TCGA-B0-5095 TCGA-B0-5096 TCGA-B0-5097 TCGA-B0-5099 TCGA-B0-5100 
         333          245           67          151          485         1913 
TCGA-B0-5102 TCGA-B0-5104 TCGA-B0-5106 TCGA-B0-5107 TCGA-B0-5108 TCGA-B0-5109 
        2763         2751         1597          927          162          586 
TCGA-B0-5110 TCGA-B0-5113 TCGA-B0-5115 TCGA-B0-5116 TCGA-B0-5119 TCGA-B0-5120 
         560           22           90          103           48           55 
TCGA-B0-5121 TCGA-B0-5399 TCGA-B0-5400 TCGA-B0-5402 TCGA-B0-5691 TCGA-B0-5692 
         186          190          677           10         2781         1487 
TCGA-B0-5693 TCGA-B0-5694 TCGA-B0-5695 TCGA-B0-5696 TCGA-B0-5697 TCGA-B0-5698 
        1852          469         1042          944         1135         2181 
TCGA-B0-5699 TCGA-B0-5701 TCGA-B0-5702 TCGA-B0-5703 TCGA-B0-5705 TCGA-B0-5706 
        2425         1276         1158          262         3335         2414 
TCGA-B0-5707 TCGA-B0-5709 TCGA-B0-5710 TCGA-B0-5711 TCGA-B0-5713 TCGA-B0-5812 
        2592         2357          957         2553         1864         2324 
TCGA-B2-3924 TCGA-B2-4098 TCGA-B2-4099 TCGA-B2-4101 TCGA-B2-4102 TCGA-B2-5633 
         194           50          110           90           15          214 
TCGA-B2-5635 TCGA-B2-5641 TCGA-B4-5377 TCGA-B8-4143 TCGA-B8-4146 TCGA-B8-4148 
         315          168          291          709          511          379 
TCGA-B8-4151 TCGA-B8-4153 TCGA-B8-4154 TCGA-B8-4620 TCGA-B8-4621 TCGA-B8-4622 
         279          404          255          226          215          181 
TCGA-B8-5158 TCGA-B8-5159 TCGA-B8-5163 TCGA-B8-5164 TCGA-B8-5165 TCGA-B8-5545 
          90          133            4           23            8          248 
TCGA-B8-5546 TCGA-B8-5549 TCGA-B8-5551 TCGA-B8-5552 TCGA-BP-4161 TCGA-BP-4162 
          14          194           15          219         2746         3074 
TCGA-BP-4163 TCGA-BP-4164 TCGA-BP-4167 TCGA-BP-4770 TCGA-BP-4782 TCGA-BP-4801 
        2839          992         2718          329          354         1124 
TCGA-BP-4960 TCGA-BP-4961 TCGA-BP-4962 TCGA-BP-4963 TCGA-BP-4964 TCGA-BP-4967 
        2172         1935         1785         1834         1862          204 
TCGA-BP-4968 TCGA-BP-4970 TCGA-BP-4971 TCGA-BP-4972 TCGA-BP-4973 TCGA-BP-4974 
        1745          432         1487         1501         1384          220 
TCGA-BP-4975 TCGA-BP-4976 TCGA-BP-4977 TCGA-BP-4981 TCGA-BP-4982 TCGA-BP-4983 
        1433         1632          454         1097         1013         1412 
TCGA-BP-4985 TCGA-BP-4986 TCGA-BP-4987 TCGA-BP-4988 TCGA-BP-4989 TCGA-BP-4991 
         951          785         1124          827          117         1044 
TCGA-BP-4992 TCGA-BP-4993 TCGA-BP-4995 TCGA-BP-4998 TCGA-BP-4999 TCGA-BP-5000 
         500          176         1371          931         1266          563 
TCGA-BP-5001 TCGA-BP-5004 TCGA-BP-5006 TCGA-BP-5007 TCGA-BP-5008 TCGA-BP-5009 
        1177         1126          840         1140         1071         1092 
TCGA-BP-5010 TCGA-BP-5168 TCGA-BP-5169 TCGA-BP-5170 TCGA-BP-5173 TCGA-BP-5174 
         877         1463          192         2411           54         2257 
TCGA-BP-5175 TCGA-BP-5176 TCGA-BP-5177 TCGA-BP-5178 TCGA-BP-5180 TCGA-BP-5182 
         932         1590          293         1912         1892         1165 
TCGA-BP-5183 TCGA-BP-5184 TCGA-BP-5185 TCGA-BP-5186 TCGA-BP-5187 TCGA-BP-5189 
        1102         1133         1132          693          406          822 
TCGA-BP-5190 TCGA-BP-5191 TCGA-BP-5192 TCGA-BP-5194 TCGA-BP-5195 TCGA-BP-5196 
        1010          966          714          408          748         1018 
TCGA-BP-5198 TCGA-BP-5199 TCGA-BP-5200 TCGA-BP-5201 TCGA-BP-5202 TCGA-CJ-4634 
         603         1354          881          951           29         1820 
TCGA-CJ-4636 TCGA-CJ-4637 TCGA-CJ-4638 TCGA-CJ-4639 TCGA-CJ-4640 TCGA-CJ-4641 
        1924         2227          431         2308         1998         1661 
TCGA-CJ-4643 TCGA-CJ-4644 TCGA-CJ-4882 TCGA-CJ-4897 TCGA-CJ-4899 TCGA-CJ-4901 
        1792          336         1883         1808         1527         1450 
TCGA-CJ-4902 TCGA-CJ-4903 TCGA-CJ-4904 TCGA-CJ-4905 TCGA-CJ-4907 TCGA-CJ-4908 
        1519         1559         1792         1495         1498         1530 
TCGA-CJ-4912 TCGA-CJ-4913 TCGA-CJ-4916 TCGA-CJ-4918 TCGA-CJ-4920 TCGA-CJ-4923 
        1656         1173         1372           92          139          572 
TCGA-CJ-5671 TCGA-CJ-5672 TCGA-CJ-5675 TCGA-CJ-5676 TCGA-CJ-5677 TCGA-CJ-5678 
        1942         2190         2429         2575          782          573 
TCGA-CJ-5679 TCGA-CJ-5680 TCGA-CJ-5681 TCGA-CJ-5682 TCGA-CJ-5683 TCGA-CJ-5684 
         678          768          551         1883         1889         2230 
TCGA-CJ-5686 TCGA-CJ-6027 TCGA-CJ-6028 TCGA-CJ-6030 TCGA-CJ-6031 TCGA-CJ-6032 
        2038         1855           NA           NA         1905         2548 
TCGA-CJ-6033 TCGA-CW-5580 TCGA-CW-5581 TCGA-CW-5583 TCGA-CW-5584 TCGA-CW-5585 
          NA         1964         2799         2489          164         2609 
TCGA-CW-5588 TCGA-CW-5589 TCGA-CW-5591 TCGA-CW-6087 TCGA-CW-6090 TCGA-CW-6093 
        2016         2377         2270           41         2308         2430 
TCGA-CZ-4853 TCGA-CZ-4856 TCGA-CZ-4859 TCGA-CZ-4863 TCGA-CZ-4866 TCGA-CZ-5451 
         774           18         1787         1690         1768         1668 
TCGA-CZ-5452 TCGA-CZ-5453 TCGA-CZ-5454 TCGA-CZ-5456 TCGA-CZ-5457 TCGA-CZ-5458 
        1556           25          722         1558         1547         1558 
TCGA-CZ-5459 TCGA-CZ-5460 TCGA-CZ-5461 TCGA-CZ-5462 TCGA-CZ-5463 TCGA-CZ-5464 
        1515         1430          330          311          662         1492 
TCGA-CZ-5465 TCGA-CZ-5466 TCGA-CZ-5467 TCGA-CZ-5468 TCGA-CZ-5469 TCGA-CZ-5470 
        1377          685           73           59          945           NA 
TCGA-CZ-5982 TCGA-CZ-5984 TCGA-CZ-5985 TCGA-CZ-5986 TCGA-CZ-5987 TCGA-CZ-5988 
        2042         1491         1629          373          435          693 
TCGA-CZ-5989 TCGA-EU-5904 TCGA-EU-5905 TCGA-EU-5906 TCGA-EU-5907 
        1599          550          118          206          126 
Variable 1:'AGE':	nDistinctValues=52,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 2:'DAYSTODEATH':	nDistinctValues=76,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 3:'DAYSTOLASTFOLLOWUP':	nDistinctValues=271,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 4:'VITALSTATUS':	nDistinctValues=2,	numeric=TRUE,	binary=TRUE,	exclude=FALSE.
Variable 5:'DCCUPLOADDAY':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 6:'PRIMARY.SITE.OF.DISEASE':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 7:'GENDER':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'DAYOFINITIALPATHOLOGICDIAGNOSIS':	nDistinctValues=12,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 9:'DAYSTOLASTKNOWNALIVE':	nDistinctValues=253,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 10:'KARNOFSKY.PERFORMANCE.SCORE':	nDistinctValues=3,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 11:'HISTOLOGICAL.TYPE':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 12:'RADIATIONS.RADIATION.REGIMENINDICATION':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 13:'NUMBERPACKYEARSSMOKED':	nDistinctValues=2,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 14:'YEAROFTOBACCOSMOKINGONSET':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 15:'DISTANT.METASTASIS':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 16:'LYMPH.NODE.METASTASIS':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 17:'TUMOR.STAGECODE':	nDistinctValues=10,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 18:'NEOPLASM.DISEASESTAGE':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 19:'BATCH.NUMBER':	nDistinctValues=9,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
[1] "rownames(nsurv.mat)"
[1] "AGE"                         "GENDER"                     
[3] "KARNOFSKY.PERFORMANCE.SCORE" "DISTANT.METASTASIS"         
[5] "LYMPH.NODE.METASTASIS"       "TUMOR.STAGECODE"            
[7] "NEOPLASM.DISEASESTAGE"      
[1] "TUMOR.?STAGE" "6"           
[1] "stage2"
vv
 T1 T1A T1B  T2 T2A T2B  T3 T3A T3B  T4 
 13  72  64  32   3   3   2  71  30   3 
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 293 columns, 1 survival variables, and 7 non-survival variables.
AGE, nv=52, binary=FALSE, numeric=TRUE
GENDER, nv=2, binary=FALSE, numeric=FALSE
KARNOFSKY.PERFORMANCE.SCORE, nv=3, binary=FALSE, numeric=TRUE
DISTANT.METASTASIS, nv=2, binary=FALSE, numeric=FALSE
LYMPH.NODE.METASTASIS, nv=3, binary=FALSE, numeric=FALSE
TUMOR.STAGECODE, nv=0, binary=FALSE, numeric=TRUE
NEOPLASM.DISEASESTAGE, nv=4, binary=FALSE, numeric=FALSE

Clustering(1) Variable = PBRM1 MUTATION ANALYSIS
D1V1, survival
                 sevent
clus2               0   1
  PBRM1 MUTATED    77  29
  PBRM1 WILD-TYPE 137  48
  PBRM1 MUTATED PBRM1 WILD-TYPE 
            106             185 
  PBRM1 MUTATED PBRM1 WILD-TYPE 
             29              48 
$`PBRM1 MUTATED`
TCGA-A3-3311 TCGA-A3-3320 TCGA-A3-3322 TCGA-A3-3323 TCGA-A3-3324 TCGA-A3-3326 
       39.12        49.58        48.56        36.33        38.99        37.38 
TCGA-A3-3362 TCGA-A3-3367 TCGA-A3-3372 TCGA-A3-3373 TCGA-A3-3382 TCGA-A3-3383 
       51.25        34.65        24.16        10.98        18.87        28.31 
TCGA-A3-3387 TCGA-AK-3430 TCGA-AK-3436 TCGA-AK-3458 TCGA-B0-4815 TCGA-B0-4816 
       20.25        15.78        67.17        38.40        49.02        35.54 
TCGA-B0-4818 TCGA-B0-4842 TCGA-B0-4852 TCGA-B0-5085 TCGA-B0-5094 TCGA-B0-5096 
       14.01        53.79        35.47        25.28        10.95         2.20 
TCGA-B0-5113 TCGA-B0-5115 TCGA-B0-5119 TCGA-B0-5121 TCGA-B0-5399 TCGA-B0-5693 
        0.72         2.96         1.58         6.12         6.25        60.89 
TCGA-B0-5694 TCGA-B0-5696 TCGA-B0-5698 TCGA-B0-5699 TCGA-B0-5710 TCGA-B0-5711 
       15.42        31.04        71.70        79.73        31.46        83.93 
TCGA-B0-5713 TCGA-B2-3924 TCGA-B2-4099 TCGA-B4-5377 TCGA-B8-4148 TCGA-B8-4151 
       61.28         6.38         3.62         9.57        12.46         9.17 
TCGA-B8-4154 TCGA-B8-4620 TCGA-B8-5158 TCGA-BP-4164 TCGA-BP-4770 TCGA-BP-4801 
        8.38         7.43         2.96        32.61        10.82        36.95 
TCGA-BP-4960 TCGA-BP-4964 TCGA-BP-4973 TCGA-BP-4975 TCGA-BP-4981 TCGA-BP-4982 
       71.41        61.22        45.50        47.11        36.07        33.30 
TCGA-BP-4985 TCGA-BP-4987 TCGA-BP-4988 TCGA-BP-4993 TCGA-BP-4995 TCGA-BP-4999 
       31.27        36.95        27.19         5.79        45.07        41.62 
TCGA-BP-5169 TCGA-BP-5170 TCGA-BP-5180 TCGA-BP-5183 TCGA-BP-5185 TCGA-BP-5186 
        6.31        79.27        62.20        36.23        37.22        22.78 
TCGA-BP-5187 TCGA-BP-5189 TCGA-BP-5190 TCGA-BP-5195 TCGA-BP-5198 TCGA-BP-5200 
       13.35        27.02        33.21        24.59        19.82        28.96 
TCGA-BP-5201 TCGA-CJ-4634 TCGA-CJ-4644 TCGA-CJ-4903 TCGA-CJ-4908 TCGA-CJ-4912 
       31.27        59.84        11.05        51.25        50.30        54.44 
TCGA-CJ-4913 TCGA-CJ-4923 TCGA-CJ-5675 TCGA-CJ-5676 TCGA-CJ-5677 TCGA-CJ-5678 
       38.56        18.81        79.86        84.66        25.71        18.84 
TCGA-CJ-5679 TCGA-CJ-5682 TCGA-CJ-5683 TCGA-CJ-5684 TCGA-CJ-6033 TCGA-CW-5580 
       22.29        61.91        62.10        73.32         7.36        64.57 
TCGA-CW-5584 TCGA-CW-5589 TCGA-CW-6093 TCGA-CZ-4853 TCGA-CZ-5451 TCGA-CZ-5453 
        5.39        78.15        79.89        25.45        54.84         0.82 
TCGA-CZ-5454 TCGA-CZ-5456 TCGA-CZ-5460 TCGA-CZ-5461 TCGA-CZ-5465 TCGA-CZ-5466 
       23.74        51.22        47.01        10.85        45.27        22.52 
TCGA-CZ-5982 TCGA-CZ-5986 TCGA-CZ-5987 TCGA-EU-5907 
       67.13        12.26        14.30         4.14 

$`PBRM1 WILD-TYPE`
TCGA-A3-3308 TCGA-A3-3316 TCGA-A3-3317 TCGA-A3-3319 TCGA-A3-3346 TCGA-A3-3347 
        0.53        49.08        49.02        37.15         4.50        36.07 
TCGA-A3-3349 TCGA-A3-3351 TCGA-A3-3357 TCGA-A3-3358 TCGA-A3-3363 TCGA-A3-3365 
       45.53        29.92        46.85        42.97        10.49        28.67 
TCGA-A3-3370 TCGA-A3-3376 TCGA-A3-3378 TCGA-A3-3380 TCGA-A3-3385 TCGA-AK-3429 
       25.51        35.18        20.71        18.64        23.87        66.31 
TCGA-AK-3444 TCGA-AK-3451 TCGA-AK-3455 TCGA-AK-3456 TCGA-B0-4700 TCGA-B0-4706 
       48.36        48.69        22.45         1.51        65.06         0.85 
TCGA-B0-4710 TCGA-B0-4712 TCGA-B0-4810 TCGA-B0-4811 TCGA-B0-4823 TCGA-B0-4827 
        0.16        43.96         8.75        39.32        14.93        29.06 
TCGA-B0-4945 TCGA-B0-5075 TCGA-B0-5077 TCGA-B0-5080 TCGA-B0-5081 TCGA-B0-5088 
       70.52        19.99        42.44         7.30         7.66        14.24 
TCGA-B0-5092 TCGA-B0-5095 TCGA-B0-5097 TCGA-B0-5099 TCGA-B0-5100 TCGA-B0-5102 
       15.09         8.05         4.96        15.95        62.89        90.84 
TCGA-B0-5104 TCGA-B0-5106 TCGA-B0-5107 TCGA-B0-5108 TCGA-B0-5109 TCGA-B0-5110 
       90.44        52.50        30.48         5.33        19.27        18.41 
TCGA-B0-5116 TCGA-B0-5120 TCGA-B0-5400 TCGA-B0-5402 TCGA-B0-5691 TCGA-B0-5692 
        3.39         1.81        22.26         0.33        91.43        48.89 
TCGA-B0-5695 TCGA-B0-5697 TCGA-B0-5701 TCGA-B0-5702 TCGA-B0-5703 TCGA-B0-5705 
       34.26        37.32        41.95        38.07         8.61       109.64 
TCGA-B0-5706 TCGA-B0-5707 TCGA-B0-5709 TCGA-B0-5812 TCGA-B2-4098 TCGA-B2-4101 
       79.36        85.22        77.49        76.41         1.64         2.96 
TCGA-B2-4102 TCGA-B2-5633 TCGA-B2-5635 TCGA-B2-5641 TCGA-B8-4143 TCGA-B8-4146 
        0.49         7.04        10.36         5.52        23.31        16.80 
TCGA-B8-4153 TCGA-B8-4621 TCGA-B8-4622 TCGA-B8-5159 TCGA-B8-5163 TCGA-B8-5164 
       13.28         7.07         5.95         4.37         0.13         0.76 
TCGA-B8-5165 TCGA-B8-5545 TCGA-B8-5546 TCGA-B8-5549 TCGA-B8-5551 TCGA-B8-5552 
        0.26         8.15         0.46         6.38         0.49         7.20 
TCGA-BP-4161 TCGA-BP-4162 TCGA-BP-4163 TCGA-BP-4167 TCGA-BP-4782 TCGA-BP-4961 
       90.28       101.06        93.34        89.36        11.64        63.62 
TCGA-BP-4962 TCGA-BP-4963 TCGA-BP-4967 TCGA-BP-4968 TCGA-BP-4970 TCGA-BP-4971 
       58.68        60.30         6.71        57.37        14.20        48.89 
TCGA-BP-4972 TCGA-BP-4974 TCGA-BP-4976 TCGA-BP-4977 TCGA-BP-4983 TCGA-BP-4986 
       49.35         7.23        53.65        14.93        46.42        25.81 
TCGA-BP-4989 TCGA-BP-4991 TCGA-BP-4992 TCGA-BP-4998 TCGA-BP-5000 TCGA-BP-5001 
        3.85        34.32        16.44        30.61        18.51        38.70 
TCGA-BP-5004 TCGA-BP-5006 TCGA-BP-5007 TCGA-BP-5008 TCGA-BP-5009 TCGA-BP-5010 
       37.02        27.62        37.48        35.21        35.90        28.83 
TCGA-BP-5168 TCGA-BP-5173 TCGA-BP-5174 TCGA-BP-5175 TCGA-BP-5176 TCGA-BP-5177 
       48.10         1.78        74.20        30.64        52.27         9.63 
TCGA-BP-5178 TCGA-BP-5182 TCGA-BP-5184 TCGA-BP-5191 TCGA-BP-5192 TCGA-BP-5194 
       62.86        38.30        37.25        31.76        23.47        13.41 
TCGA-BP-5196 TCGA-BP-5199 TCGA-BP-5202 TCGA-CJ-4636 TCGA-CJ-4637 TCGA-CJ-4638 
       33.47        44.52         0.95        63.25        73.22        14.17 
TCGA-CJ-4639 TCGA-CJ-4640 TCGA-CJ-4641 TCGA-CJ-4643 TCGA-CJ-4882 TCGA-CJ-4897 
       75.88        65.69        54.61        58.92        61.91        59.44 
TCGA-CJ-4899 TCGA-CJ-4901 TCGA-CJ-4902 TCGA-CJ-4904 TCGA-CJ-4905 TCGA-CJ-4907 
       50.20        47.67        49.94        58.92        49.15        49.25 
TCGA-CJ-4916 TCGA-CJ-4918 TCGA-CJ-4920 TCGA-CJ-5671 TCGA-CJ-5672 TCGA-CJ-5680 
       45.11         3.02         4.57        63.85        72.00        25.25 
TCGA-CJ-5681 TCGA-CJ-5686 TCGA-CJ-6027 TCGA-CJ-6028 TCGA-CJ-6030 TCGA-CJ-6031 
       18.12        67.00        60.99        53.42        75.55        62.63 
TCGA-CJ-6032 TCGA-CW-5581 TCGA-CW-5583 TCGA-CW-5585 TCGA-CW-5588 TCGA-CW-5591 
       83.77        92.02        81.83        85.78        66.28        74.63 
TCGA-CW-6087 TCGA-CW-6090 TCGA-CZ-4856 TCGA-CZ-4859 TCGA-CZ-4863 TCGA-CZ-4866 
        1.35        75.88         0.59        58.75        55.56        58.13 
TCGA-CZ-5452 TCGA-CZ-5457 TCGA-CZ-5458 TCGA-CZ-5459 TCGA-CZ-5462 TCGA-CZ-5463 
       51.16        50.86        51.22        49.81        10.22        21.76 
TCGA-CZ-5464 TCGA-CZ-5467 TCGA-CZ-5468 TCGA-CZ-5469 TCGA-CZ-5984 TCGA-CZ-5985 
       49.05         2.40         1.94        31.07        49.02        53.56 
TCGA-CZ-5988 TCGA-CZ-5989 TCGA-EU-5904 TCGA-EU-5905 TCGA-EU-5906 
       22.78        52.57        18.08         3.88         6.77 

  PBRM1 MUTATED PBRM1 WILD-TYPE 
           0.72            0.13 
  PBRM1 MUTATED PBRM1 WILD-TYPE 
          84.66          109.64 
  PBRM1 MUTATED PBRM1 WILD-TYPE 
         32.035          35.210 
[1] "0.7 - 84.7 (32.0)"  "0.1 - 109.6 (35.2)"
     TCGA-A3-3308      TCGA-A3-3311      TCGA-A3-3316      TCGA-A3-3317 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-A3-3319      TCGA-A3-3320      TCGA-A3-3322      TCGA-A3-3323 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" 
     TCGA-A3-3324      TCGA-A3-3326      TCGA-A3-3346      TCGA-A3-3347 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-A3-3349      TCGA-A3-3351      TCGA-A3-3357      TCGA-A3-3358 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-A3-3362      TCGA-A3-3363      TCGA-A3-3365      TCGA-A3-3367 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-A3-3370      TCGA-A3-3372      TCGA-A3-3373      TCGA-A3-3376 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-A3-3378      TCGA-A3-3380      TCGA-A3-3382      TCGA-A3-3383 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" 
     TCGA-A3-3385      TCGA-A3-3387      TCGA-AK-3429      TCGA-AK-3430 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-AK-3436      TCGA-AK-3444      TCGA-AK-3451      TCGA-AK-3455 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-AK-3456      TCGA-AK-3458      TCGA-B0-4700      TCGA-B0-4706 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-4710      TCGA-B0-4712      TCGA-B0-4810      TCGA-B0-4811 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-4815      TCGA-B0-4816      TCGA-B0-4818      TCGA-B0-4823 
  "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-B0-4827      TCGA-B0-4842      TCGA-B0-4852      TCGA-B0-4945 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-B0-5075      TCGA-B0-5077      TCGA-B0-5080      TCGA-B0-5081 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-5085      TCGA-B0-5088      TCGA-B0-5092      TCGA-B0-5094 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-B0-5095      TCGA-B0-5096      TCGA-B0-5097      TCGA-B0-5099 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-5100      TCGA-B0-5102      TCGA-B0-5104      TCGA-B0-5106 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-5107      TCGA-B0-5108      TCGA-B0-5109      TCGA-B0-5110 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-5113      TCGA-B0-5115      TCGA-B0-5116      TCGA-B0-5119 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-B0-5120      TCGA-B0-5121      TCGA-B0-5399      TCGA-B0-5400 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-B0-5402      TCGA-B0-5691      TCGA-B0-5692      TCGA-B0-5693 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-B0-5694      TCGA-B0-5695      TCGA-B0-5696      TCGA-B0-5697 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-B0-5698      TCGA-B0-5699      TCGA-B0-5701      TCGA-B0-5702 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-5703      TCGA-B0-5705      TCGA-B0-5706      TCGA-B0-5707 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-5709      TCGA-B0-5710      TCGA-B0-5711      TCGA-B0-5713 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" 
     TCGA-B0-5812      TCGA-B2-3924      TCGA-B2-4098      TCGA-B2-4099 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-B2-4101      TCGA-B2-4102      TCGA-B2-5633      TCGA-B2-5635 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B2-5641      TCGA-B4-5377      TCGA-B8-4143      TCGA-B8-4146 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B8-4148      TCGA-B8-4151      TCGA-B8-4153      TCGA-B8-4154 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-B8-4620      TCGA-B8-4621      TCGA-B8-4622      TCGA-B8-5158 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-B8-5159      TCGA-B8-5163      TCGA-B8-5164      TCGA-B8-5165 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B8-5545      TCGA-B8-5546      TCGA-B8-5549      TCGA-B8-5551 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B8-5552      TCGA-BP-4161      TCGA-BP-4162      TCGA-BP-4163 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-BP-4164      TCGA-BP-4167      TCGA-BP-4770      TCGA-BP-4782 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-BP-4801      TCGA-BP-4960      TCGA-BP-4961      TCGA-BP-4962 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-BP-4963      TCGA-BP-4964      TCGA-BP-4967      TCGA-BP-4968 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-BP-4970      TCGA-BP-4971      TCGA-BP-4972      TCGA-BP-4973 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-BP-4974      TCGA-BP-4975      TCGA-BP-4976      TCGA-BP-4977 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-BP-4981      TCGA-BP-4982      TCGA-BP-4983      TCGA-BP-4985 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-BP-4986      TCGA-BP-4987      TCGA-BP-4988      TCGA-BP-4989 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-BP-4991      TCGA-BP-4992      TCGA-BP-4993      TCGA-BP-4995 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" 
     TCGA-BP-4998      TCGA-BP-4999      TCGA-BP-5000      TCGA-BP-5001 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-BP-5004      TCGA-BP-5006      TCGA-BP-5007      TCGA-BP-5008 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-BP-5009      TCGA-BP-5010      TCGA-BP-5168      TCGA-BP-5169 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-BP-5170      TCGA-BP-5173      TCGA-BP-5174      TCGA-BP-5175 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-BP-5176      TCGA-BP-5177      TCGA-BP-5178      TCGA-BP-5180 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-BP-5182      TCGA-BP-5183      TCGA-BP-5184      TCGA-BP-5185 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-BP-5186      TCGA-BP-5187      TCGA-BP-5189      TCGA-BP-5190 
  "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" 
     TCGA-BP-5191      TCGA-BP-5192      TCGA-BP-5194      TCGA-BP-5195 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-BP-5196      TCGA-BP-5198      TCGA-BP-5199      TCGA-BP-5200 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-BP-5201      TCGA-BP-5202      TCGA-CJ-4634      TCGA-CJ-4636 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CJ-4637      TCGA-CJ-4638      TCGA-CJ-4639      TCGA-CJ-4640 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CJ-4641      TCGA-CJ-4643      TCGA-CJ-4644      TCGA-CJ-4882 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CJ-4897      TCGA-CJ-4899      TCGA-CJ-4901      TCGA-CJ-4902 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CJ-4903      TCGA-CJ-4904      TCGA-CJ-4905      TCGA-CJ-4907 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CJ-4908      TCGA-CJ-4912      TCGA-CJ-4913      TCGA-CJ-4916 
  "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CJ-4918      TCGA-CJ-4920      TCGA-CJ-4923      TCGA-CJ-5671 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CJ-5672      TCGA-CJ-5675      TCGA-CJ-5676      TCGA-CJ-5677 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" 
     TCGA-CJ-5678      TCGA-CJ-5679      TCGA-CJ-5680      TCGA-CJ-5681 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CJ-5682      TCGA-CJ-5683      TCGA-CJ-5684      TCGA-CJ-5686 
  "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CJ-6027      TCGA-CJ-6028      TCGA-CJ-6030      TCGA-CJ-6031 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CJ-6032      TCGA-CJ-6033      TCGA-CW-5580      TCGA-CW-5581 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CW-5583      TCGA-CW-5584      TCGA-CW-5585      TCGA-CW-5588 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CW-5589      TCGA-CW-5591      TCGA-CW-6087      TCGA-CW-6090 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CW-6093      TCGA-CZ-4853      TCGA-CZ-4856      TCGA-CZ-4859 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CZ-4863      TCGA-CZ-4866      TCGA-CZ-5451      TCGA-CZ-5452 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CZ-5453      TCGA-CZ-5454      TCGA-CZ-5456      TCGA-CZ-5457 
  "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CZ-5458      TCGA-CZ-5459      TCGA-CZ-5460      TCGA-CZ-5461 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" 
     TCGA-CZ-5462      TCGA-CZ-5463      TCGA-CZ-5464      TCGA-CZ-5465 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-CZ-5466      TCGA-CZ-5467      TCGA-CZ-5468      TCGA-CZ-5469 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CZ-5982      TCGA-CZ-5984      TCGA-CZ-5985      TCGA-CZ-5986 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-CZ-5987      TCGA-CZ-5988      TCGA-CZ-5989      TCGA-EU-5904 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-EU-5905      TCGA-EU-5906      TCGA-EU-5907 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-A3-3308      TCGA-A3-3311      TCGA-A3-3316      TCGA-A3-3317 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-A3-3319      TCGA-A3-3320      TCGA-A3-3322      TCGA-A3-3323 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" 
     TCGA-A3-3324      TCGA-A3-3326      TCGA-A3-3346      TCGA-A3-3347 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-A3-3349      TCGA-A3-3351      TCGA-A3-3357      TCGA-A3-3358 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-A3-3362      TCGA-A3-3363      TCGA-A3-3365      TCGA-A3-3367 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-A3-3370      TCGA-A3-3372      TCGA-A3-3373      TCGA-A3-3376 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-A3-3378      TCGA-A3-3380      TCGA-A3-3382      TCGA-A3-3383 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" 
     TCGA-A3-3385      TCGA-A3-3387      TCGA-AK-3429      TCGA-AK-3430 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-AK-3436      TCGA-AK-3444      TCGA-AK-3451      TCGA-AK-3455 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-AK-3456      TCGA-AK-3458      TCGA-B0-4700      TCGA-B0-4706 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-4710      TCGA-B0-4712      TCGA-B0-4810      TCGA-B0-4811 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-4815      TCGA-B0-4816      TCGA-B0-4818      TCGA-B0-4823 
  "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-B0-4827      TCGA-B0-4842      TCGA-B0-4852      TCGA-B0-4945 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-B0-5075      TCGA-B0-5077      TCGA-B0-5080      TCGA-B0-5081 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-5085      TCGA-B0-5088      TCGA-B0-5092      TCGA-B0-5094 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-B0-5095      TCGA-B0-5096      TCGA-B0-5097      TCGA-B0-5099 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-5100      TCGA-B0-5102      TCGA-B0-5104      TCGA-B0-5106 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-5107      TCGA-B0-5108      TCGA-B0-5109      TCGA-B0-5110 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-5113      TCGA-B0-5115      TCGA-B0-5116      TCGA-B0-5119 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-B0-5120      TCGA-B0-5121      TCGA-B0-5399      TCGA-B0-5400 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-B0-5402      TCGA-B0-5691      TCGA-B0-5692      TCGA-B0-5693 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-B0-5694      TCGA-B0-5695      TCGA-B0-5696      TCGA-B0-5697 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-B0-5698      TCGA-B0-5699      TCGA-B0-5701      TCGA-B0-5702 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-5703      TCGA-B0-5705      TCGA-B0-5706      TCGA-B0-5707 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-5709      TCGA-B0-5710      TCGA-B0-5711      TCGA-B0-5713 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" 
     TCGA-B0-5812      TCGA-B2-3924      TCGA-B2-4098      TCGA-B2-4099 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-B2-4101      TCGA-B2-4102      TCGA-B2-5633      TCGA-B2-5635 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B2-5641      TCGA-B4-5377      TCGA-B8-4143      TCGA-B8-4146 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B8-4148      TCGA-B8-4151      TCGA-B8-4153      TCGA-B8-4154 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-B8-4620      TCGA-B8-4621      TCGA-B8-4622      TCGA-B8-5158 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-B8-5159      TCGA-B8-5163      TCGA-B8-5164      TCGA-B8-5165 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B8-5545      TCGA-B8-5546      TCGA-B8-5549      TCGA-B8-5551 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B8-5552      TCGA-BP-4161      TCGA-BP-4162      TCGA-BP-4163 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-BP-4164      TCGA-BP-4167      TCGA-BP-4770      TCGA-BP-4782 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-BP-4801      TCGA-BP-4960      TCGA-BP-4961      TCGA-BP-4962 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-BP-4963      TCGA-BP-4964      TCGA-BP-4967      TCGA-BP-4968 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-BP-4970      TCGA-BP-4971      TCGA-BP-4972      TCGA-BP-4973 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-BP-4974      TCGA-BP-4975      TCGA-BP-4976      TCGA-BP-4977 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-BP-4981      TCGA-BP-4982      TCGA-BP-4983      TCGA-BP-4985 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-BP-4986      TCGA-BP-4987      TCGA-BP-4988      TCGA-BP-4989 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-BP-4991      TCGA-BP-4992      TCGA-BP-4993      TCGA-BP-4995 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" 
     TCGA-BP-4998      TCGA-BP-4999      TCGA-BP-5000      TCGA-BP-5001 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-BP-5004      TCGA-BP-5006      TCGA-BP-5007      TCGA-BP-5008 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-BP-5009      TCGA-BP-5010      TCGA-BP-5168      TCGA-BP-5169 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-BP-5170      TCGA-BP-5173      TCGA-BP-5174      TCGA-BP-5175 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-BP-5176      TCGA-BP-5177      TCGA-BP-5178      TCGA-BP-5180 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-BP-5182      TCGA-BP-5183      TCGA-BP-5184      TCGA-BP-5185 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-BP-5186      TCGA-BP-5187      TCGA-BP-5189      TCGA-BP-5190 
  "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" 
     TCGA-BP-5191      TCGA-BP-5192      TCGA-BP-5194      TCGA-BP-5195 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-BP-5196      TCGA-BP-5198      TCGA-BP-5199      TCGA-BP-5200 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-BP-5201      TCGA-BP-5202      TCGA-CJ-4634      TCGA-CJ-4636 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CJ-4637      TCGA-CJ-4638      TCGA-CJ-4639      TCGA-CJ-4640 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CJ-4641      TCGA-CJ-4643      TCGA-CJ-4644      TCGA-CJ-4882 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CJ-4897      TCGA-CJ-4899      TCGA-CJ-4901      TCGA-CJ-4902 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CJ-4903      TCGA-CJ-4904      TCGA-CJ-4905      TCGA-CJ-4907 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CJ-4908      TCGA-CJ-4912      TCGA-CJ-4913      TCGA-CJ-4916 
  "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CJ-4918      TCGA-CJ-4920      TCGA-CJ-4923      TCGA-CJ-5671 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CJ-5672      TCGA-CJ-5675      TCGA-CJ-5676      TCGA-CJ-5677 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" 
     TCGA-CJ-5678      TCGA-CJ-5679      TCGA-CJ-5680      TCGA-CJ-5681 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CJ-5682      TCGA-CJ-5683      TCGA-CJ-5684      TCGA-CJ-5686 
  "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CJ-6027      TCGA-CJ-6028      TCGA-CJ-6030      TCGA-CJ-6031 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CJ-6032      TCGA-CJ-6033      TCGA-CW-5580      TCGA-CW-5581 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CW-5583      TCGA-CW-5584      TCGA-CW-5585      TCGA-CW-5588 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CW-5589      TCGA-CW-5591      TCGA-CW-6087      TCGA-CW-6090 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CW-6093      TCGA-CZ-4853      TCGA-CZ-4856      TCGA-CZ-4859 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CZ-4863      TCGA-CZ-4866      TCGA-CZ-5451      TCGA-CZ-5452 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CZ-5453      TCGA-CZ-5454      TCGA-CZ-5456      TCGA-CZ-5457 
  "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CZ-5458      TCGA-CZ-5459      TCGA-CZ-5460      TCGA-CZ-5461 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" 
     TCGA-CZ-5462      TCGA-CZ-5463      TCGA-CZ-5464      TCGA-CZ-5465 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-CZ-5466      TCGA-CZ-5467      TCGA-CZ-5468      TCGA-CZ-5469 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CZ-5982      TCGA-CZ-5984      TCGA-CZ-5985      TCGA-CZ-5986 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-CZ-5987      TCGA-CZ-5988      TCGA-CZ-5989      TCGA-EU-5904 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-EU-5905      TCGA-EU-5906      TCGA-EU-5907 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-A3-3308      TCGA-A3-3311      TCGA-A3-3316      TCGA-A3-3317 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-A3-3319      TCGA-A3-3320      TCGA-A3-3322      TCGA-A3-3323 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" 
     TCGA-A3-3324      TCGA-A3-3326      TCGA-A3-3346      TCGA-A3-3347 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-A3-3349      TCGA-A3-3351      TCGA-A3-3357      TCGA-A3-3358 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-A3-3362      TCGA-A3-3363      TCGA-A3-3365      TCGA-A3-3367 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-A3-3370      TCGA-A3-3372      TCGA-A3-3373      TCGA-A3-3376 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-A3-3378      TCGA-A3-3380      TCGA-A3-3382      TCGA-A3-3383 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" 
     TCGA-A3-3385      TCGA-A3-3387      TCGA-AK-3429      TCGA-AK-3430 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-AK-3436      TCGA-AK-3444      TCGA-AK-3451      TCGA-AK-3455 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-AK-3456      TCGA-AK-3458      TCGA-B0-4700      TCGA-B0-4706 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-4710      TCGA-B0-4712      TCGA-B0-4810      TCGA-B0-4811 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-4815      TCGA-B0-4816      TCGA-B0-4818      TCGA-B0-4823 
  "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-B0-4827      TCGA-B0-4842      TCGA-B0-4852      TCGA-B0-4945 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-B0-5075      TCGA-B0-5077      TCGA-B0-5080      TCGA-B0-5081 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-5085      TCGA-B0-5088      TCGA-B0-5092      TCGA-B0-5094 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-B0-5095      TCGA-B0-5096      TCGA-B0-5097      TCGA-B0-5099 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-5100      TCGA-B0-5102      TCGA-B0-5104      TCGA-B0-5106 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-5107      TCGA-B0-5108      TCGA-B0-5109      TCGA-B0-5110 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-5113      TCGA-B0-5115      TCGA-B0-5116      TCGA-B0-5119 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-B0-5120      TCGA-B0-5121      TCGA-B0-5399      TCGA-B0-5400 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-B0-5402      TCGA-B0-5691      TCGA-B0-5692      TCGA-B0-5693 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-B0-5694      TCGA-B0-5695      TCGA-B0-5696      TCGA-B0-5697 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-B0-5698      TCGA-B0-5699      TCGA-B0-5701      TCGA-B0-5702 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-5703      TCGA-B0-5705      TCGA-B0-5706      TCGA-B0-5707 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B0-5709      TCGA-B0-5710      TCGA-B0-5711      TCGA-B0-5713 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" 
     TCGA-B0-5812      TCGA-B2-3924      TCGA-B2-4098      TCGA-B2-4099 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-B2-4101      TCGA-B2-4102      TCGA-B2-5633      TCGA-B2-5635 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B2-5641      TCGA-B4-5377      TCGA-B8-4143      TCGA-B8-4146 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B8-4148      TCGA-B8-4151      TCGA-B8-4153      TCGA-B8-4154 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-B8-4620      TCGA-B8-4621      TCGA-B8-4622      TCGA-B8-5158 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-B8-5159      TCGA-B8-5163      TCGA-B8-5164      TCGA-B8-5165 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B8-5545      TCGA-B8-5546      TCGA-B8-5549      TCGA-B8-5551 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-B8-5552      TCGA-BP-4161      TCGA-BP-4162      TCGA-BP-4163 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-BP-4164      TCGA-BP-4167      TCGA-BP-4770      TCGA-BP-4782 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-BP-4801      TCGA-BP-4960      TCGA-BP-4961      TCGA-BP-4962 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-BP-4963      TCGA-BP-4964      TCGA-BP-4967      TCGA-BP-4968 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-BP-4970      TCGA-BP-4971      TCGA-BP-4972      TCGA-BP-4973 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-BP-4974      TCGA-BP-4975      TCGA-BP-4976      TCGA-BP-4977 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-BP-4981      TCGA-BP-4982      TCGA-BP-4983      TCGA-BP-4985 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-BP-4986      TCGA-BP-4987      TCGA-BP-4988      TCGA-BP-4989 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-BP-4991      TCGA-BP-4992      TCGA-BP-4993      TCGA-BP-4995 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" 
     TCGA-BP-4998      TCGA-BP-4999      TCGA-BP-5000      TCGA-BP-5001 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-BP-5004      TCGA-BP-5006      TCGA-BP-5007      TCGA-BP-5008 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-BP-5009      TCGA-BP-5010      TCGA-BP-5168      TCGA-BP-5169 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-BP-5170      TCGA-BP-5173      TCGA-BP-5174      TCGA-BP-5175 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-BP-5176      TCGA-BP-5177      TCGA-BP-5178      TCGA-BP-5180 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-BP-5182      TCGA-BP-5183      TCGA-BP-5184      TCGA-BP-5185 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-BP-5186      TCGA-BP-5187      TCGA-BP-5189      TCGA-BP-5190 
  "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" 
     TCGA-BP-5191      TCGA-BP-5192      TCGA-BP-5194      TCGA-BP-5195 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-BP-5196      TCGA-BP-5198      TCGA-BP-5199      TCGA-BP-5200 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-BP-5201      TCGA-BP-5202      TCGA-CJ-4634      TCGA-CJ-4636 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CJ-4637      TCGA-CJ-4638      TCGA-CJ-4639      TCGA-CJ-4640 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CJ-4641      TCGA-CJ-4643      TCGA-CJ-4644      TCGA-CJ-4882 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CJ-4897      TCGA-CJ-4899      TCGA-CJ-4901      TCGA-CJ-4902 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CJ-4903      TCGA-CJ-4904      TCGA-CJ-4905      TCGA-CJ-4907 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CJ-4908      TCGA-CJ-4912      TCGA-CJ-4913      TCGA-CJ-4916 
  "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CJ-4918      TCGA-CJ-4920      TCGA-CJ-4923      TCGA-CJ-5671 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CJ-5672      TCGA-CJ-5675      TCGA-CJ-5676      TCGA-CJ-5677 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" 
     TCGA-CJ-5678      TCGA-CJ-5679      TCGA-CJ-5680      TCGA-CJ-5681 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CJ-5682      TCGA-CJ-5683      TCGA-CJ-5684      TCGA-CJ-5686 
  "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CJ-6027      TCGA-CJ-6028      TCGA-CJ-6030      TCGA-CJ-6031 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CJ-6032      TCGA-CJ-6033      TCGA-CW-5580      TCGA-CW-5581 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CW-5583      TCGA-CW-5584      TCGA-CW-5585      TCGA-CW-5588 
"PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CW-5589      TCGA-CW-5591      TCGA-CW-6087      TCGA-CW-6090 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CW-6093      TCGA-CZ-4853      TCGA-CZ-4856      TCGA-CZ-4859 
  "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CZ-4863      TCGA-CZ-4866      TCGA-CZ-5451      TCGA-CZ-5452 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CZ-5453      TCGA-CZ-5454      TCGA-CZ-5456      TCGA-CZ-5457 
  "PBRM1 MUTATED"   "PBRM1 MUTATED"   "PBRM1 MUTATED" "PBRM1 WILD-TYPE" 
     TCGA-CZ-5458      TCGA-CZ-5459      TCGA-CZ-5460      TCGA-CZ-5461 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED"   "PBRM1 MUTATED" 
     TCGA-CZ-5462      TCGA-CZ-5463      TCGA-CZ-5464      TCGA-CZ-5465 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-CZ-5466      TCGA-CZ-5467      TCGA-CZ-5468      TCGA-CZ-5469 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-CZ-5982      TCGA-CZ-5984      TCGA-CZ-5985      TCGA-CZ-5986 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
     TCGA-CZ-5987      TCGA-CZ-5988      TCGA-CZ-5989      TCGA-EU-5904 
  "PBRM1 MUTATED" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE" 
     TCGA-EU-5905      TCGA-EU-5906      TCGA-EU-5907 
"PBRM1 WILD-TYPE" "PBRM1 WILD-TYPE"   "PBRM1 MUTATED" 
[1] "hr=" "1.2"
D1V2, continuous
D1V3, binary
                 cls
clus                0   1
  PBRM1 MUTATED    33  74
  PBRM1 WILD-TYPE  69 117
[1] "tbl2"
                 cls
clus              [,1] [,2]
  PBRM1 MUTATED     33   74
  PBRM1 WILD-TYPE   69  117
        clus
vv       PBRM1 MUTATED PBRM1 WILD-TYPE
  FEMALE            33              69
  MALE              74             117
D1V4, continuous
D1V5, binary
                 cls
clus                0   1
  PBRM1 MUTATED    91  16
  PBRM1 WILD-TYPE 163  23
[1] "tbl2"
                 cls
clus              [,1] [,2]
  PBRM1 MUTATED     91   16
  PBRM1 WILD-TYPE  163   23
    clus
vv   PBRM1 MUTATED PBRM1 WILD-TYPE
  M0            91             163
  M1            16              23
                 vv
clus              N0 N1 NX
  PBRM1 MUTATED   44  4 59
  PBRM1 WILD-TYPE 91  7 88
D1V6, multiclass
    clus
vv   PBRM1 MUTATED PBRM1 WILD-TYPE
  N0            44              91
  N1             4               7
  NX            59              88
D1V7, continuous
                 vv
clus              STAGE I STAGE II STAGE III STAGE IV
  PBRM1 MUTATED        51       11        29       16
  PBRM1 WILD-TYPE      93       21        48       24
D1V8, multiclass
           clus
vv          PBRM1 MUTATED PBRM1 WILD-TYPE
  STAGE I              51              93
  STAGE II             11              21
  STAGE III            29              48
  STAGE IV             16              24

Clustering(2) Variable = SV2C MUTATION ANALYSIS
D2V1, survival
                sevent
clus2              0   1
  SV2C MUTATED     2   1
  SV2C WILD-TYPE 212  76
  SV2C MUTATED SV2C WILD-TYPE 
             3            288 
  SV2C MUTATED SV2C WILD-TYPE 
             1             76 
$`SV2C MUTATED`
TCGA-B0-4842 TCGA-B0-5702 TCGA-B2-5641 
       53.79        38.07         5.52 

$`SV2C WILD-TYPE`
TCGA-A3-3308 TCGA-A3-3311 TCGA-A3-3316 TCGA-A3-3317 TCGA-A3-3319 TCGA-A3-3320 
        0.53        39.12        49.08        49.02        37.15        49.58 
TCGA-A3-3322 TCGA-A3-3323 TCGA-A3-3324 TCGA-A3-3326 TCGA-A3-3346 TCGA-A3-3347 
       48.56        36.33        38.99        37.38         4.50        36.07 
TCGA-A3-3349 TCGA-A3-3351 TCGA-A3-3357 TCGA-A3-3358 TCGA-A3-3362 TCGA-A3-3363 
       45.53        29.92        46.85        42.97        51.25        10.49 
TCGA-A3-3365 TCGA-A3-3367 TCGA-A3-3370 TCGA-A3-3372 TCGA-A3-3373 TCGA-A3-3376 
       28.67        34.65        25.51        24.16        10.98        35.18 
TCGA-A3-3378 TCGA-A3-3380 TCGA-A3-3382 TCGA-A3-3383 TCGA-A3-3385 TCGA-A3-3387 
       20.71        18.64        18.87        28.31        23.87        20.25 
TCGA-AK-3429 TCGA-AK-3430 TCGA-AK-3436 TCGA-AK-3444 TCGA-AK-3451 TCGA-AK-3455 
       66.31        15.78        67.17        48.36        48.69        22.45 
TCGA-AK-3456 TCGA-AK-3458 TCGA-B0-4700 TCGA-B0-4706 TCGA-B0-4710 TCGA-B0-4712 
        1.51        38.40        65.06         0.85         0.16        43.96 
TCGA-B0-4810 TCGA-B0-4811 TCGA-B0-4815 TCGA-B0-4816 TCGA-B0-4818 TCGA-B0-4823 
        8.75        39.32        49.02        35.54        14.01        14.93 
TCGA-B0-4827 TCGA-B0-4852 TCGA-B0-4945 TCGA-B0-5075 TCGA-B0-5077 TCGA-B0-5080 
       29.06        35.47        70.52        19.99        42.44         7.30 
TCGA-B0-5081 TCGA-B0-5085 TCGA-B0-5088 TCGA-B0-5092 TCGA-B0-5094 TCGA-B0-5095 
        7.66        25.28        14.24        15.09        10.95         8.05 
TCGA-B0-5096 TCGA-B0-5097 TCGA-B0-5099 TCGA-B0-5100 TCGA-B0-5102 TCGA-B0-5104 
        2.20         4.96        15.95        62.89        90.84        90.44 
TCGA-B0-5106 TCGA-B0-5107 TCGA-B0-5108 TCGA-B0-5109 TCGA-B0-5110 TCGA-B0-5113 
       52.50        30.48         5.33        19.27        18.41         0.72 
TCGA-B0-5115 TCGA-B0-5116 TCGA-B0-5119 TCGA-B0-5120 TCGA-B0-5121 TCGA-B0-5399 
        2.96         3.39         1.58         1.81         6.12         6.25 
TCGA-B0-5400 TCGA-B0-5402 TCGA-B0-5691 TCGA-B0-5692 TCGA-B0-5693 TCGA-B0-5694 
       22.26         0.33        91.43        48.89        60.89        15.42 
TCGA-B0-5695 TCGA-B0-5696 TCGA-B0-5697 TCGA-B0-5698 TCGA-B0-5699 TCGA-B0-5701 
       34.26        31.04        37.32        71.70        79.73        41.95 
TCGA-B0-5703 TCGA-B0-5705 TCGA-B0-5706 TCGA-B0-5707 TCGA-B0-5709 TCGA-B0-5710 
        8.61       109.64        79.36        85.22        77.49        31.46 
TCGA-B0-5711 TCGA-B0-5713 TCGA-B0-5812 TCGA-B2-3924 TCGA-B2-4098 TCGA-B2-4099 
       83.93        61.28        76.41         6.38         1.64         3.62 
TCGA-B2-4101 TCGA-B2-4102 TCGA-B2-5633 TCGA-B2-5635 TCGA-B4-5377 TCGA-B8-4143 
        2.96         0.49         7.04        10.36         9.57        23.31 
TCGA-B8-4146 TCGA-B8-4148 TCGA-B8-4151 TCGA-B8-4153 TCGA-B8-4154 TCGA-B8-4620 
       16.80        12.46         9.17        13.28         8.38         7.43 
TCGA-B8-4621 TCGA-B8-4622 TCGA-B8-5158 TCGA-B8-5159 TCGA-B8-5163 TCGA-B8-5164 
        7.07         5.95         2.96         4.37         0.13         0.76 
TCGA-B8-5165 TCGA-B8-5545 TCGA-B8-5546 TCGA-B8-5549 TCGA-B8-5551 TCGA-B8-5552 
        0.26         8.15         0.46         6.38         0.49         7.20 
TCGA-BP-4161 TCGA-BP-4162 TCGA-BP-4163 TCGA-BP-4164 TCGA-BP-4167 TCGA-BP-4770 
       90.28       101.06        93.34        32.61        89.36        10.82 
TCGA-BP-4782 TCGA-BP-4801 TCGA-BP-4960 TCGA-BP-4961 TCGA-BP-4962 TCGA-BP-4963 
       11.64        36.95        71.41        63.62        58.68        60.30 
TCGA-BP-4964 TCGA-BP-4967 TCGA-BP-4968 TCGA-BP-4970 TCGA-BP-4971 TCGA-BP-4972 
       61.22         6.71        57.37        14.20        48.89        49.35 
TCGA-BP-4973 TCGA-BP-4974 TCGA-BP-4975 TCGA-BP-4976 TCGA-BP-4977 TCGA-BP-4981 
       45.50         7.23        47.11        53.65        14.93        36.07 
TCGA-BP-4982 TCGA-BP-4983 TCGA-BP-4985 TCGA-BP-4986 TCGA-BP-4987 TCGA-BP-4988 
       33.30        46.42        31.27        25.81        36.95        27.19 
TCGA-BP-4989 TCGA-BP-4991 TCGA-BP-4992 TCGA-BP-4993 TCGA-BP-4995 TCGA-BP-4998 
        3.85        34.32        16.44         5.79        45.07        30.61 
TCGA-BP-4999 TCGA-BP-5000 TCGA-BP-5001 TCGA-BP-5004 TCGA-BP-5006 TCGA-BP-5007 
       41.62        18.51        38.70        37.02        27.62        37.48 
TCGA-BP-5008 TCGA-BP-5009 TCGA-BP-5010 TCGA-BP-5168 TCGA-BP-5169 TCGA-BP-5170 
       35.21        35.90        28.83        48.10         6.31        79.27 
TCGA-BP-5173 TCGA-BP-5174 TCGA-BP-5175 TCGA-BP-5176 TCGA-BP-5177 TCGA-BP-5178 
        1.78        74.20        30.64        52.27         9.63        62.86 
TCGA-BP-5180 TCGA-BP-5182 TCGA-BP-5183 TCGA-BP-5184 TCGA-BP-5185 TCGA-BP-5186 
       62.20        38.30        36.23        37.25        37.22        22.78 
TCGA-BP-5187 TCGA-BP-5189 TCGA-BP-5190 TCGA-BP-5191 TCGA-BP-5192 TCGA-BP-5194 
       13.35        27.02        33.21        31.76        23.47        13.41 
TCGA-BP-5195 TCGA-BP-5196 TCGA-BP-5198 TCGA-BP-5199 TCGA-BP-5200 TCGA-BP-5201 
       24.59        33.47        19.82        44.52        28.96        31.27 
TCGA-BP-5202 TCGA-CJ-4634 TCGA-CJ-4636 TCGA-CJ-4637 TCGA-CJ-4638 TCGA-CJ-4639 
        0.95        59.84        63.25        73.22        14.17        75.88 
TCGA-CJ-4640 TCGA-CJ-4641 TCGA-CJ-4643 TCGA-CJ-4644 TCGA-CJ-4882 TCGA-CJ-4897 
       65.69        54.61        58.92        11.05        61.91        59.44 
TCGA-CJ-4899 TCGA-CJ-4901 TCGA-CJ-4902 TCGA-CJ-4903 TCGA-CJ-4904 TCGA-CJ-4905 
       50.20        47.67        49.94        51.25        58.92        49.15 
TCGA-CJ-4907 TCGA-CJ-4908 TCGA-CJ-4912 TCGA-CJ-4913 TCGA-CJ-4916 TCGA-CJ-4918 
       49.25        50.30        54.44        38.56        45.11         3.02 
TCGA-CJ-4920 TCGA-CJ-4923 TCGA-CJ-5671 TCGA-CJ-5672 TCGA-CJ-5675 TCGA-CJ-5676 
        4.57        18.81        63.85        72.00        79.86        84.66 
TCGA-CJ-5677 TCGA-CJ-5678 TCGA-CJ-5679 TCGA-CJ-5680 TCGA-CJ-5681 TCGA-CJ-5682 
       25.71        18.84        22.29        25.25        18.12        61.91 
TCGA-CJ-5683 TCGA-CJ-5684 TCGA-CJ-5686 TCGA-CJ-6027 TCGA-CJ-6028 TCGA-CJ-6030 
       62.10        73.32        67.00        60.99        53.42        75.55 
TCGA-CJ-6031 TCGA-CJ-6032 TCGA-CJ-6033 TCGA-CW-5580 TCGA-CW-5581 TCGA-CW-5583 
       62.63        83.77         7.36        64.57        92.02        81.83 
TCGA-CW-5584 TCGA-CW-5585 TCGA-CW-5588 TCGA-CW-5589 TCGA-CW-5591 TCGA-CW-6087 
        5.39        85.78        66.28        78.15        74.63         1.35 
TCGA-CW-6090 TCGA-CW-6093 TCGA-CZ-4853 TCGA-CZ-4856 TCGA-CZ-4859 TCGA-CZ-4863 
       75.88        79.89        25.45         0.59        58.75        55.56 
TCGA-CZ-4866 TCGA-CZ-5451 TCGA-CZ-5452 TCGA-CZ-5453 TCGA-CZ-5454 TCGA-CZ-5456 
       58.13        54.84        51.16         0.82        23.74        51.22 
TCGA-CZ-5457 TCGA-CZ-5458 TCGA-CZ-5459 TCGA-CZ-5460 TCGA-CZ-5461 TCGA-CZ-5462 
       50.86        51.22        49.81        47.01        10.85        10.22 
TCGA-CZ-5463 TCGA-CZ-5464 TCGA-CZ-5465 TCGA-CZ-5466 TCGA-CZ-5467 TCGA-CZ-5468 
       21.76        49.05        45.27        22.52         2.40         1.94 
TCGA-CZ-5469 TCGA-CZ-5982 TCGA-CZ-5984 TCGA-CZ-5985 TCGA-CZ-5986 TCGA-CZ-5987 
       31.07        67.13        49.02        53.56        12.26        14.30 
TCGA-CZ-5988 TCGA-CZ-5989 TCGA-EU-5904 TCGA-EU-5905 TCGA-EU-5906 TCGA-EU-5907 
       22.78        52.57        18.08         3.88         6.77         4.14 

  SV2C MUTATED SV2C WILD-TYPE 
          5.52           0.13 
  SV2C MUTATED SV2C WILD-TYPE 
         53.79         109.64 
  SV2C MUTATED SV2C WILD-TYPE 
        38.070         33.865 
[1] "5.5 - 53.8 (38.1)"  "0.1 - 109.6 (33.9)"
    TCGA-A3-3308     TCGA-A3-3311     TCGA-A3-3316     TCGA-A3-3317 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3319     TCGA-A3-3320     TCGA-A3-3322     TCGA-A3-3323 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3324     TCGA-A3-3326     TCGA-A3-3346     TCGA-A3-3347 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3349     TCGA-A3-3351     TCGA-A3-3357     TCGA-A3-3358 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3362     TCGA-A3-3363     TCGA-A3-3365     TCGA-A3-3367 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3370     TCGA-A3-3372     TCGA-A3-3373     TCGA-A3-3376 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3378     TCGA-A3-3380     TCGA-A3-3382     TCGA-A3-3383 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3385     TCGA-A3-3387     TCGA-AK-3429     TCGA-AK-3430 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-AK-3436     TCGA-AK-3444     TCGA-AK-3451     TCGA-AK-3455 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-AK-3456     TCGA-AK-3458     TCGA-B0-4700     TCGA-B0-4706 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-4710     TCGA-B0-4712     TCGA-B0-4810     TCGA-B0-4811 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-4815     TCGA-B0-4816     TCGA-B0-4818     TCGA-B0-4823 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-4827     TCGA-B0-4842     TCGA-B0-4852     TCGA-B0-4945 
"SV2C WILD-TYPE"   "SV2C MUTATED" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5075     TCGA-B0-5077     TCGA-B0-5080     TCGA-B0-5081 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5085     TCGA-B0-5088     TCGA-B0-5092     TCGA-B0-5094 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5095     TCGA-B0-5096     TCGA-B0-5097     TCGA-B0-5099 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5100     TCGA-B0-5102     TCGA-B0-5104     TCGA-B0-5106 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5107     TCGA-B0-5108     TCGA-B0-5109     TCGA-B0-5110 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5113     TCGA-B0-5115     TCGA-B0-5116     TCGA-B0-5119 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5120     TCGA-B0-5121     TCGA-B0-5399     TCGA-B0-5400 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5402     TCGA-B0-5691     TCGA-B0-5692     TCGA-B0-5693 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5694     TCGA-B0-5695     TCGA-B0-5696     TCGA-B0-5697 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5698     TCGA-B0-5699     TCGA-B0-5701     TCGA-B0-5702 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE"   "SV2C MUTATED" 
    TCGA-B0-5703     TCGA-B0-5705     TCGA-B0-5706     TCGA-B0-5707 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5709     TCGA-B0-5710     TCGA-B0-5711     TCGA-B0-5713 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5812     TCGA-B2-3924     TCGA-B2-4098     TCGA-B2-4099 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B2-4101     TCGA-B2-4102     TCGA-B2-5633     TCGA-B2-5635 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B2-5641     TCGA-B4-5377     TCGA-B8-4143     TCGA-B8-4146 
  "SV2C MUTATED" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B8-4148     TCGA-B8-4151     TCGA-B8-4153     TCGA-B8-4154 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B8-4620     TCGA-B8-4621     TCGA-B8-4622     TCGA-B8-5158 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B8-5159     TCGA-B8-5163     TCGA-B8-5164     TCGA-B8-5165 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B8-5545     TCGA-B8-5546     TCGA-B8-5549     TCGA-B8-5551 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B8-5552     TCGA-BP-4161     TCGA-BP-4162     TCGA-BP-4163 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4164     TCGA-BP-4167     TCGA-BP-4770     TCGA-BP-4782 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4801     TCGA-BP-4960     TCGA-BP-4961     TCGA-BP-4962 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4963     TCGA-BP-4964     TCGA-BP-4967     TCGA-BP-4968 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4970     TCGA-BP-4971     TCGA-BP-4972     TCGA-BP-4973 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4974     TCGA-BP-4975     TCGA-BP-4976     TCGA-BP-4977 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4981     TCGA-BP-4982     TCGA-BP-4983     TCGA-BP-4985 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4986     TCGA-BP-4987     TCGA-BP-4988     TCGA-BP-4989 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4991     TCGA-BP-4992     TCGA-BP-4993     TCGA-BP-4995 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4998     TCGA-BP-4999     TCGA-BP-5000     TCGA-BP-5001 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5004     TCGA-BP-5006     TCGA-BP-5007     TCGA-BP-5008 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5009     TCGA-BP-5010     TCGA-BP-5168     TCGA-BP-5169 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5170     TCGA-BP-5173     TCGA-BP-5174     TCGA-BP-5175 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5176     TCGA-BP-5177     TCGA-BP-5178     TCGA-BP-5180 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5182     TCGA-BP-5183     TCGA-BP-5184     TCGA-BP-5185 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5186     TCGA-BP-5187     TCGA-BP-5189     TCGA-BP-5190 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5191     TCGA-BP-5192     TCGA-BP-5194     TCGA-BP-5195 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5196     TCGA-BP-5198     TCGA-BP-5199     TCGA-BP-5200 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5201     TCGA-BP-5202     TCGA-CJ-4634     TCGA-CJ-4636 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-4637     TCGA-CJ-4638     TCGA-CJ-4639     TCGA-CJ-4640 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-4641     TCGA-CJ-4643     TCGA-CJ-4644     TCGA-CJ-4882 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-4897     TCGA-CJ-4899     TCGA-CJ-4901     TCGA-CJ-4902 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-4903     TCGA-CJ-4904     TCGA-CJ-4905     TCGA-CJ-4907 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-4908     TCGA-CJ-4912     TCGA-CJ-4913     TCGA-CJ-4916 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-4918     TCGA-CJ-4920     TCGA-CJ-4923     TCGA-CJ-5671 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-5672     TCGA-CJ-5675     TCGA-CJ-5676     TCGA-CJ-5677 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-5678     TCGA-CJ-5679     TCGA-CJ-5680     TCGA-CJ-5681 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-5682     TCGA-CJ-5683     TCGA-CJ-5684     TCGA-CJ-5686 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-6027     TCGA-CJ-6028     TCGA-CJ-6030     TCGA-CJ-6031 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-6032     TCGA-CJ-6033     TCGA-CW-5580     TCGA-CW-5581 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CW-5583     TCGA-CW-5584     TCGA-CW-5585     TCGA-CW-5588 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CW-5589     TCGA-CW-5591     TCGA-CW-6087     TCGA-CW-6090 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CW-6093     TCGA-CZ-4853     TCGA-CZ-4856     TCGA-CZ-4859 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CZ-4863     TCGA-CZ-4866     TCGA-CZ-5451     TCGA-CZ-5452 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CZ-5453     TCGA-CZ-5454     TCGA-CZ-5456     TCGA-CZ-5457 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CZ-5458     TCGA-CZ-5459     TCGA-CZ-5460     TCGA-CZ-5461 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CZ-5462     TCGA-CZ-5463     TCGA-CZ-5464     TCGA-CZ-5465 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CZ-5466     TCGA-CZ-5467     TCGA-CZ-5468     TCGA-CZ-5469 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CZ-5982     TCGA-CZ-5984     TCGA-CZ-5985     TCGA-CZ-5986 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CZ-5987     TCGA-CZ-5988     TCGA-CZ-5989     TCGA-EU-5904 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-EU-5905     TCGA-EU-5906     TCGA-EU-5907 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3308     TCGA-A3-3311     TCGA-A3-3316     TCGA-A3-3317 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3319     TCGA-A3-3320     TCGA-A3-3322     TCGA-A3-3323 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3324     TCGA-A3-3326     TCGA-A3-3346     TCGA-A3-3347 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3349     TCGA-A3-3351     TCGA-A3-3357     TCGA-A3-3358 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3362     TCGA-A3-3363     TCGA-A3-3365     TCGA-A3-3367 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3370     TCGA-A3-3372     TCGA-A3-3373     TCGA-A3-3376 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3378     TCGA-A3-3380     TCGA-A3-3382     TCGA-A3-3383 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3385     TCGA-A3-3387     TCGA-AK-3429     TCGA-AK-3430 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-AK-3436     TCGA-AK-3444     TCGA-AK-3451     TCGA-AK-3455 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-AK-3456     TCGA-AK-3458     TCGA-B0-4700     TCGA-B0-4706 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-4710     TCGA-B0-4712     TCGA-B0-4810     TCGA-B0-4811 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-4815     TCGA-B0-4816     TCGA-B0-4818     TCGA-B0-4823 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-4827     TCGA-B0-4842     TCGA-B0-4852     TCGA-B0-4945 
"SV2C WILD-TYPE"   "SV2C MUTATED" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5075     TCGA-B0-5077     TCGA-B0-5080     TCGA-B0-5081 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5085     TCGA-B0-5088     TCGA-B0-5092     TCGA-B0-5094 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5095     TCGA-B0-5096     TCGA-B0-5097     TCGA-B0-5099 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5100     TCGA-B0-5102     TCGA-B0-5104     TCGA-B0-5106 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5107     TCGA-B0-5108     TCGA-B0-5109     TCGA-B0-5110 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5113     TCGA-B0-5115     TCGA-B0-5116     TCGA-B0-5119 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5120     TCGA-B0-5121     TCGA-B0-5399     TCGA-B0-5400 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5402     TCGA-B0-5691     TCGA-B0-5692     TCGA-B0-5693 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5694     TCGA-B0-5695     TCGA-B0-5696     TCGA-B0-5697 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5698     TCGA-B0-5699     TCGA-B0-5701     TCGA-B0-5702 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE"   "SV2C MUTATED" 
    TCGA-B0-5703     TCGA-B0-5705     TCGA-B0-5706     TCGA-B0-5707 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5709     TCGA-B0-5710     TCGA-B0-5711     TCGA-B0-5713 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5812     TCGA-B2-3924     TCGA-B2-4098     TCGA-B2-4099 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B2-4101     TCGA-B2-4102     TCGA-B2-5633     TCGA-B2-5635 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B2-5641     TCGA-B4-5377     TCGA-B8-4143     TCGA-B8-4146 
  "SV2C MUTATED" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B8-4148     TCGA-B8-4151     TCGA-B8-4153     TCGA-B8-4154 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B8-4620     TCGA-B8-4621     TCGA-B8-4622     TCGA-B8-5158 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B8-5159     TCGA-B8-5163     TCGA-B8-5164     TCGA-B8-5165 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B8-5545     TCGA-B8-5546     TCGA-B8-5549     TCGA-B8-5551 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B8-5552     TCGA-BP-4161     TCGA-BP-4162     TCGA-BP-4163 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4164     TCGA-BP-4167     TCGA-BP-4770     TCGA-BP-4782 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4801     TCGA-BP-4960     TCGA-BP-4961     TCGA-BP-4962 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4963     TCGA-BP-4964     TCGA-BP-4967     TCGA-BP-4968 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4970     TCGA-BP-4971     TCGA-BP-4972     TCGA-BP-4973 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4974     TCGA-BP-4975     TCGA-BP-4976     TCGA-BP-4977 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4981     TCGA-BP-4982     TCGA-BP-4983     TCGA-BP-4985 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4986     TCGA-BP-4987     TCGA-BP-4988     TCGA-BP-4989 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4991     TCGA-BP-4992     TCGA-BP-4993     TCGA-BP-4995 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4998     TCGA-BP-4999     TCGA-BP-5000     TCGA-BP-5001 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5004     TCGA-BP-5006     TCGA-BP-5007     TCGA-BP-5008 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5009     TCGA-BP-5010     TCGA-BP-5168     TCGA-BP-5169 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5170     TCGA-BP-5173     TCGA-BP-5174     TCGA-BP-5175 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5176     TCGA-BP-5177     TCGA-BP-5178     TCGA-BP-5180 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5182     TCGA-BP-5183     TCGA-BP-5184     TCGA-BP-5185 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5186     TCGA-BP-5187     TCGA-BP-5189     TCGA-BP-5190 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5191     TCGA-BP-5192     TCGA-BP-5194     TCGA-BP-5195 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5196     TCGA-BP-5198     TCGA-BP-5199     TCGA-BP-5200 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5201     TCGA-BP-5202     TCGA-CJ-4634     TCGA-CJ-4636 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-4637     TCGA-CJ-4638     TCGA-CJ-4639     TCGA-CJ-4640 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-4641     TCGA-CJ-4643     TCGA-CJ-4644     TCGA-CJ-4882 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-4897     TCGA-CJ-4899     TCGA-CJ-4901     TCGA-CJ-4902 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-4903     TCGA-CJ-4904     TCGA-CJ-4905     TCGA-CJ-4907 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-4908     TCGA-CJ-4912     TCGA-CJ-4913     TCGA-CJ-4916 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-4918     TCGA-CJ-4920     TCGA-CJ-4923     TCGA-CJ-5671 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-5672     TCGA-CJ-5675     TCGA-CJ-5676     TCGA-CJ-5677 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-5678     TCGA-CJ-5679     TCGA-CJ-5680     TCGA-CJ-5681 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-5682     TCGA-CJ-5683     TCGA-CJ-5684     TCGA-CJ-5686 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-6027     TCGA-CJ-6028     TCGA-CJ-6030     TCGA-CJ-6031 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-6032     TCGA-CJ-6033     TCGA-CW-5580     TCGA-CW-5581 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CW-5583     TCGA-CW-5584     TCGA-CW-5585     TCGA-CW-5588 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CW-5589     TCGA-CW-5591     TCGA-CW-6087     TCGA-CW-6090 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CW-6093     TCGA-CZ-4853     TCGA-CZ-4856     TCGA-CZ-4859 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CZ-4863     TCGA-CZ-4866     TCGA-CZ-5451     TCGA-CZ-5452 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CZ-5453     TCGA-CZ-5454     TCGA-CZ-5456     TCGA-CZ-5457 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CZ-5458     TCGA-CZ-5459     TCGA-CZ-5460     TCGA-CZ-5461 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CZ-5462     TCGA-CZ-5463     TCGA-CZ-5464     TCGA-CZ-5465 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CZ-5466     TCGA-CZ-5467     TCGA-CZ-5468     TCGA-CZ-5469 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CZ-5982     TCGA-CZ-5984     TCGA-CZ-5985     TCGA-CZ-5986 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CZ-5987     TCGA-CZ-5988     TCGA-CZ-5989     TCGA-EU-5904 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-EU-5905     TCGA-EU-5906     TCGA-EU-5907 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3308     TCGA-A3-3311     TCGA-A3-3316     TCGA-A3-3317 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3319     TCGA-A3-3320     TCGA-A3-3322     TCGA-A3-3323 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3324     TCGA-A3-3326     TCGA-A3-3346     TCGA-A3-3347 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3349     TCGA-A3-3351     TCGA-A3-3357     TCGA-A3-3358 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3362     TCGA-A3-3363     TCGA-A3-3365     TCGA-A3-3367 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3370     TCGA-A3-3372     TCGA-A3-3373     TCGA-A3-3376 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3378     TCGA-A3-3380     TCGA-A3-3382     TCGA-A3-3383 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-A3-3385     TCGA-A3-3387     TCGA-AK-3429     TCGA-AK-3430 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-AK-3436     TCGA-AK-3444     TCGA-AK-3451     TCGA-AK-3455 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-AK-3456     TCGA-AK-3458     TCGA-B0-4700     TCGA-B0-4706 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-4710     TCGA-B0-4712     TCGA-B0-4810     TCGA-B0-4811 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-4815     TCGA-B0-4816     TCGA-B0-4818     TCGA-B0-4823 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-4827     TCGA-B0-4842     TCGA-B0-4852     TCGA-B0-4945 
"SV2C WILD-TYPE"   "SV2C MUTATED" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5075     TCGA-B0-5077     TCGA-B0-5080     TCGA-B0-5081 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5085     TCGA-B0-5088     TCGA-B0-5092     TCGA-B0-5094 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5095     TCGA-B0-5096     TCGA-B0-5097     TCGA-B0-5099 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5100     TCGA-B0-5102     TCGA-B0-5104     TCGA-B0-5106 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5107     TCGA-B0-5108     TCGA-B0-5109     TCGA-B0-5110 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5113     TCGA-B0-5115     TCGA-B0-5116     TCGA-B0-5119 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5120     TCGA-B0-5121     TCGA-B0-5399     TCGA-B0-5400 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5402     TCGA-B0-5691     TCGA-B0-5692     TCGA-B0-5693 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5694     TCGA-B0-5695     TCGA-B0-5696     TCGA-B0-5697 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5698     TCGA-B0-5699     TCGA-B0-5701     TCGA-B0-5702 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE"   "SV2C MUTATED" 
    TCGA-B0-5703     TCGA-B0-5705     TCGA-B0-5706     TCGA-B0-5707 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5709     TCGA-B0-5710     TCGA-B0-5711     TCGA-B0-5713 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B0-5812     TCGA-B2-3924     TCGA-B2-4098     TCGA-B2-4099 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B2-4101     TCGA-B2-4102     TCGA-B2-5633     TCGA-B2-5635 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B2-5641     TCGA-B4-5377     TCGA-B8-4143     TCGA-B8-4146 
  "SV2C MUTATED" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B8-4148     TCGA-B8-4151     TCGA-B8-4153     TCGA-B8-4154 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B8-4620     TCGA-B8-4621     TCGA-B8-4622     TCGA-B8-5158 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B8-5159     TCGA-B8-5163     TCGA-B8-5164     TCGA-B8-5165 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B8-5545     TCGA-B8-5546     TCGA-B8-5549     TCGA-B8-5551 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-B8-5552     TCGA-BP-4161     TCGA-BP-4162     TCGA-BP-4163 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4164     TCGA-BP-4167     TCGA-BP-4770     TCGA-BP-4782 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4801     TCGA-BP-4960     TCGA-BP-4961     TCGA-BP-4962 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4963     TCGA-BP-4964     TCGA-BP-4967     TCGA-BP-4968 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4970     TCGA-BP-4971     TCGA-BP-4972     TCGA-BP-4973 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4974     TCGA-BP-4975     TCGA-BP-4976     TCGA-BP-4977 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4981     TCGA-BP-4982     TCGA-BP-4983     TCGA-BP-4985 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4986     TCGA-BP-4987     TCGA-BP-4988     TCGA-BP-4989 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4991     TCGA-BP-4992     TCGA-BP-4993     TCGA-BP-4995 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-4998     TCGA-BP-4999     TCGA-BP-5000     TCGA-BP-5001 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5004     TCGA-BP-5006     TCGA-BP-5007     TCGA-BP-5008 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5009     TCGA-BP-5010     TCGA-BP-5168     TCGA-BP-5169 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5170     TCGA-BP-5173     TCGA-BP-5174     TCGA-BP-5175 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5176     TCGA-BP-5177     TCGA-BP-5178     TCGA-BP-5180 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5182     TCGA-BP-5183     TCGA-BP-5184     TCGA-BP-5185 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5186     TCGA-BP-5187     TCGA-BP-5189     TCGA-BP-5190 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5191     TCGA-BP-5192     TCGA-BP-5194     TCGA-BP-5195 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5196     TCGA-BP-5198     TCGA-BP-5199     TCGA-BP-5200 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-BP-5201     TCGA-BP-5202     TCGA-CJ-4634     TCGA-CJ-4636 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-4637     TCGA-CJ-4638     TCGA-CJ-4639     TCGA-CJ-4640 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-4641     TCGA-CJ-4643     TCGA-CJ-4644     TCGA-CJ-4882 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-4897     TCGA-CJ-4899     TCGA-CJ-4901     TCGA-CJ-4902 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-4903     TCGA-CJ-4904     TCGA-CJ-4905     TCGA-CJ-4907 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-4908     TCGA-CJ-4912     TCGA-CJ-4913     TCGA-CJ-4916 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-4918     TCGA-CJ-4920     TCGA-CJ-4923     TCGA-CJ-5671 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-5672     TCGA-CJ-5675     TCGA-CJ-5676     TCGA-CJ-5677 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-5678     TCGA-CJ-5679     TCGA-CJ-5680     TCGA-CJ-5681 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-5682     TCGA-CJ-5683     TCGA-CJ-5684     TCGA-CJ-5686 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-6027     TCGA-CJ-6028     TCGA-CJ-6030     TCGA-CJ-6031 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CJ-6032     TCGA-CJ-6033     TCGA-CW-5580     TCGA-CW-5581 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CW-5583     TCGA-CW-5584     TCGA-CW-5585     TCGA-CW-5588 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CW-5589     TCGA-CW-5591     TCGA-CW-6087     TCGA-CW-6090 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CW-6093     TCGA-CZ-4853     TCGA-CZ-4856     TCGA-CZ-4859 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CZ-4863     TCGA-CZ-4866     TCGA-CZ-5451     TCGA-CZ-5452 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CZ-5453     TCGA-CZ-5454     TCGA-CZ-5456     TCGA-CZ-5457 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CZ-5458     TCGA-CZ-5459     TCGA-CZ-5460     TCGA-CZ-5461 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CZ-5462     TCGA-CZ-5463     TCGA-CZ-5464     TCGA-CZ-5465 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CZ-5466     TCGA-CZ-5467     TCGA-CZ-5468     TCGA-CZ-5469 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CZ-5982     TCGA-CZ-5984     TCGA-CZ-5985     TCGA-CZ-5986 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-CZ-5987     TCGA-CZ-5988     TCGA-CZ-5989     TCGA-EU-5904 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
    TCGA-EU-5905     TCGA-EU-5906     TCGA-EU-5907 
"SV2C WILD-TYPE" "SV2C WILD-TYPE" "SV2C WILD-TYPE" 
[1] "hr=" "1.4"
D2V2, continuous
D2V3, binary
                cls
clus               0   1
  SV2C MUTATED     1   2
  SV2C WILD-TYPE 101 189
[1] "tbl2"
                cls
clus             [,1] [,2]
  SV2C MUTATED      1    2
  SV2C WILD-TYPE  101  189
        clus
vv       SV2C MUTATED SV2C WILD-TYPE
  FEMALE            1            101
  MALE              2            189
D2V4, continuous
D2V5, binary
                cls
clus               0   1
  SV2C MUTATED     3   0
  SV2C WILD-TYPE 251  39
[1] "tbl2"
                cls
clus             [,1] [,2]
  SV2C MUTATED      3    0
  SV2C WILD-TYPE  251   39
    clus
vv   SV2C MUTATED SV2C WILD-TYPE
  M0            3            251
  M1            0             39
                vv
clus              N0  N1  NX
  SV2C MUTATED     3   0   0
  SV2C WILD-TYPE 132  11 147
D2V6, multiclass
    clus
vv   SV2C MUTATED SV2C WILD-TYPE
  N0            3            132
  N1            0             11
  NX            0            147
D2V7, continuous
                vv
clus             STAGE I STAGE II STAGE III STAGE IV
  SV2C MUTATED         2        0         1        0
  SV2C WILD-TYPE     142       32        76       40
D2V8, multiclass
           clus
vv          SV2C MUTATED SV2C WILD-TYPE
  STAGE I              2            142
  STAGE II             0             32
  STAGE III            1             76
  STAGE IV             0             40

Clustering(3) Variable = VHL MUTATION ANALYSIS
D3V1, survival
               sevent
clus2             0   1
  VHL MUTATED    98  38
  VHL WILD-TYPE 116  39
  VHL MUTATED VHL WILD-TYPE 
          136           155 
  VHL MUTATED VHL WILD-TYPE 
           38            39 
$`VHL MUTATED`
TCGA-A3-3316 TCGA-A3-3324 TCGA-A3-3326 TCGA-A3-3362 TCGA-A3-3367 TCGA-A3-3372 
       49.08        38.99        37.38        51.25        34.65        24.16 
TCGA-A3-3373 TCGA-A3-3376 TCGA-A3-3382 TCGA-A3-3383 TCGA-A3-3385 TCGA-AK-3444 
       10.98        35.18        18.87        28.31        23.87        48.36 
TCGA-AK-3455 TCGA-AK-3458 TCGA-B0-4700 TCGA-B0-4706 TCGA-B0-4712 TCGA-B0-4823 
       22.45        38.40        65.06         0.85        43.96        14.93 
TCGA-B0-4827 TCGA-B0-4842 TCGA-B0-4852 TCGA-B0-4945 TCGA-B0-5075 TCGA-B0-5077 
       29.06        53.79        35.47        70.52        19.99        42.44 
TCGA-B0-5081 TCGA-B0-5085 TCGA-B0-5088 TCGA-B0-5094 TCGA-B0-5095 TCGA-B0-5096 
        7.66        25.28        14.24        10.95         8.05         2.20 
TCGA-B0-5097 TCGA-B0-5099 TCGA-B0-5102 TCGA-B0-5106 TCGA-B0-5107 TCGA-B0-5108 
        4.96        15.95        90.84        52.50        30.48         5.33 
TCGA-B0-5113 TCGA-B0-5115 TCGA-B0-5402 TCGA-B0-5691 TCGA-B0-5692 TCGA-B0-5693 
        0.72         2.96         0.33        91.43        48.89        60.89 
TCGA-B0-5695 TCGA-B0-5696 TCGA-B0-5703 TCGA-B0-5705 TCGA-B0-5711 TCGA-B0-5713 
       34.26        31.04         8.61       109.64        83.93        61.28 
TCGA-B0-5812 TCGA-B2-3924 TCGA-B2-4101 TCGA-B2-5635 TCGA-B8-4154 TCGA-B8-4620 
       76.41         6.38         2.96        10.36         8.38         7.43 
TCGA-B8-4622 TCGA-B8-5159 TCGA-B8-5163 TCGA-B8-5165 TCGA-B8-5549 TCGA-B8-5551 
        5.95         4.37         0.13         0.26         6.38         0.49 
TCGA-BP-4164 TCGA-BP-4960 TCGA-BP-4961 TCGA-BP-4963 TCGA-BP-4964 TCGA-BP-4967 
       32.61        71.41        63.62        60.30        61.22         6.71 
TCGA-BP-4968 TCGA-BP-4970 TCGA-BP-4975 TCGA-BP-4976 TCGA-BP-4977 TCGA-BP-4981 
       57.37        14.20        47.11        53.65        14.93        36.07 
TCGA-BP-4982 TCGA-BP-4988 TCGA-BP-4989 TCGA-BP-4993 TCGA-BP-4995 TCGA-BP-4998 
       33.30        27.19         3.85         5.79        45.07        30.61 
TCGA-BP-4999 TCGA-BP-5006 TCGA-BP-5009 TCGA-BP-5169 TCGA-BP-5173 TCGA-BP-5175 
       41.62        27.62        35.90         6.31         1.78        30.64 
TCGA-BP-5176 TCGA-BP-5177 TCGA-BP-5178 TCGA-BP-5180 TCGA-BP-5182 TCGA-BP-5183 
       52.27         9.63        62.86        62.20        38.30        36.23 
TCGA-BP-5185 TCGA-BP-5190 TCGA-BP-5192 TCGA-BP-5194 TCGA-BP-5195 TCGA-BP-5196 
       37.22        33.21        23.47        13.41        24.59        33.47 
TCGA-BP-5201 TCGA-CJ-4634 TCGA-CJ-4636 TCGA-CJ-4638 TCGA-CJ-4643 TCGA-CJ-4644 
       31.27        59.84        63.25        14.17        58.92        11.05 
TCGA-CJ-4903 TCGA-CJ-4904 TCGA-CJ-4912 TCGA-CJ-4920 TCGA-CJ-5672 TCGA-CJ-5676 
       51.25        58.92        54.44         4.57        72.00        84.66 
TCGA-CJ-5677 TCGA-CJ-5680 TCGA-CJ-5684 TCGA-CJ-6027 TCGA-CJ-6030 TCGA-CJ-6032 
       25.71        25.25        73.32        60.99        75.55        83.77 
TCGA-CJ-6033 TCGA-CW-5580 TCGA-CW-5583 TCGA-CW-5588 TCGA-CW-5591 TCGA-CW-6090 
        7.36        64.57        81.83        66.28        74.63        75.88 
TCGA-CW-6093 TCGA-CZ-4853 TCGA-CZ-4856 TCGA-CZ-4859 TCGA-CZ-5453 TCGA-CZ-5458 
       79.89        25.45         0.59        58.75         0.82        51.22 
TCGA-CZ-5459 TCGA-CZ-5460 TCGA-CZ-5465 TCGA-CZ-5982 TCGA-CZ-5984 TCGA-CZ-5985 
       49.81        47.01        45.27        67.13        49.02        53.56 
TCGA-CZ-5987 TCGA-EU-5904 TCGA-EU-5905 TCGA-EU-5907 
       14.30        18.08         3.88         4.14 

$`VHL WILD-TYPE`
TCGA-A3-3308 TCGA-A3-3311 TCGA-A3-3317 TCGA-A3-3319 TCGA-A3-3320 TCGA-A3-3322 
        0.53        39.12        49.02        37.15        49.58        48.56 
TCGA-A3-3323 TCGA-A3-3346 TCGA-A3-3347 TCGA-A3-3349 TCGA-A3-3351 TCGA-A3-3357 
       36.33         4.50        36.07        45.53        29.92        46.85 
TCGA-A3-3358 TCGA-A3-3363 TCGA-A3-3365 TCGA-A3-3370 TCGA-A3-3378 TCGA-A3-3380 
       42.97        10.49        28.67        25.51        20.71        18.64 
TCGA-A3-3387 TCGA-AK-3429 TCGA-AK-3430 TCGA-AK-3436 TCGA-AK-3451 TCGA-AK-3456 
       20.25        66.31        15.78        67.17        48.69         1.51 
TCGA-B0-4710 TCGA-B0-4810 TCGA-B0-4811 TCGA-B0-4815 TCGA-B0-4816 TCGA-B0-4818 
        0.16         8.75        39.32        49.02        35.54        14.01 
TCGA-B0-5080 TCGA-B0-5092 TCGA-B0-5100 TCGA-B0-5104 TCGA-B0-5109 TCGA-B0-5110 
        7.30        15.09        62.89        90.44        19.27        18.41 
TCGA-B0-5116 TCGA-B0-5119 TCGA-B0-5120 TCGA-B0-5121 TCGA-B0-5399 TCGA-B0-5400 
        3.39         1.58         1.81         6.12         6.25        22.26 
TCGA-B0-5694 TCGA-B0-5697 TCGA-B0-5698 TCGA-B0-5699 TCGA-B0-5701 TCGA-B0-5702 
       15.42        37.32        71.70        79.73        41.95        38.07 
TCGA-B0-5706 TCGA-B0-5707 TCGA-B0-5709 TCGA-B0-5710 TCGA-B2-4098 TCGA-B2-4099 
       79.36        85.22        77.49        31.46         1.64         3.62 
TCGA-B2-4102 TCGA-B2-5633 TCGA-B2-5641 TCGA-B4-5377 TCGA-B8-4143 TCGA-B8-4146 
        0.49         7.04         5.52         9.57        23.31        16.80 
TCGA-B8-4148 TCGA-B8-4151 TCGA-B8-4153 TCGA-B8-4621 TCGA-B8-5158 TCGA-B8-5164 
       12.46         9.17        13.28         7.07         2.96         0.76 
TCGA-B8-5545 TCGA-B8-5546 TCGA-B8-5552 TCGA-BP-4161 TCGA-BP-4162 TCGA-BP-4163 
        8.15         0.46         7.20        90.28       101.06        93.34 
TCGA-BP-4167 TCGA-BP-4770 TCGA-BP-4782 TCGA-BP-4801 TCGA-BP-4962 TCGA-BP-4971 
       89.36        10.82        11.64        36.95        58.68        48.89 
TCGA-BP-4972 TCGA-BP-4973 TCGA-BP-4974 TCGA-BP-4983 TCGA-BP-4985 TCGA-BP-4986 
       49.35        45.50         7.23        46.42        31.27        25.81 
TCGA-BP-4987 TCGA-BP-4991 TCGA-BP-4992 TCGA-BP-5000 TCGA-BP-5001 TCGA-BP-5004 
       36.95        34.32        16.44        18.51        38.70        37.02 
TCGA-BP-5007 TCGA-BP-5008 TCGA-BP-5010 TCGA-BP-5168 TCGA-BP-5170 TCGA-BP-5174 
       37.48        35.21        28.83        48.10        79.27        74.20 
TCGA-BP-5184 TCGA-BP-5186 TCGA-BP-5187 TCGA-BP-5189 TCGA-BP-5191 TCGA-BP-5198 
       37.25        22.78        13.35        27.02        31.76        19.82 
TCGA-BP-5199 TCGA-BP-5200 TCGA-BP-5202 TCGA-CJ-4637 TCGA-CJ-4639 TCGA-CJ-4640 
       44.52        28.96         0.95        73.22        75.88        65.69 
TCGA-CJ-4641 TCGA-CJ-4882 TCGA-CJ-4897 TCGA-CJ-4899 TCGA-CJ-4901 TCGA-CJ-4902 
       54.61        61.91        59.44        50.20        47.67        49.94 
TCGA-CJ-4905 TCGA-CJ-4907 TCGA-CJ-4908 TCGA-CJ-4913 TCGA-CJ-4916 TCGA-CJ-4918 
       49.15        49.25        50.30        38.56        45.11         3.02 
TCGA-CJ-4923 TCGA-CJ-5671 TCGA-CJ-5675 TCGA-CJ-5678 TCGA-CJ-5679 TCGA-CJ-5681 
       18.81        63.85        79.86        18.84        22.29        18.12 
TCGA-CJ-5682 TCGA-CJ-5683 TCGA-CJ-5686 TCGA-CJ-6028 TCGA-CJ-6031 TCGA-CW-5581 
       61.91        62.10        67.00        53.42        62.63        92.02 
TCGA-CW-5584 TCGA-CW-5585 TCGA-CW-5589 TCGA-CW-6087 TCGA-CZ-4863 TCGA-CZ-4866 
        5.39        85.78        78.15         1.35        55.56        58.13 
TCGA-CZ-5451 TCGA-CZ-5452 TCGA-CZ-5454 TCGA-CZ-5456 TCGA-CZ-5457 TCGA-CZ-5461 
       54.84        51.16        23.74        51.22        50.86        10.85 
TCGA-CZ-5462 TCGA-CZ-5463 TCGA-CZ-5464 TCGA-CZ-5466 TCGA-CZ-5467 TCGA-CZ-5468 
       10.22        21.76        49.05        22.52         2.40         1.94 
TCGA-CZ-5469 TCGA-CZ-5986 TCGA-CZ-5988 TCGA-CZ-5989 TCGA-EU-5906 
       31.07        12.26        22.78        52.57         6.77 

  VHL MUTATED VHL WILD-TYPE 
         0.13          0.16 
  VHL MUTATED VHL WILD-TYPE 
       109.64        101.06 
  VHL MUTATED VHL WILD-TYPE 
       33.385        35.210 
[1] "0.1 - 109.6 (33.4)" "0.2 - 101.1 (35.2)"
   TCGA-A3-3308    TCGA-A3-3311    TCGA-A3-3316    TCGA-A3-3317    TCGA-A3-3319 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-A3-3320    TCGA-A3-3322    TCGA-A3-3323    TCGA-A3-3324    TCGA-A3-3326 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-A3-3346    TCGA-A3-3347    TCGA-A3-3349    TCGA-A3-3351    TCGA-A3-3357 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-A3-3358    TCGA-A3-3362    TCGA-A3-3363    TCGA-A3-3365    TCGA-A3-3367 
"VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-A3-3370    TCGA-A3-3372    TCGA-A3-3373    TCGA-A3-3376    TCGA-A3-3378 
"VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-A3-3380    TCGA-A3-3382    TCGA-A3-3383    TCGA-A3-3385    TCGA-A3-3387 
"VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-AK-3429    TCGA-AK-3430    TCGA-AK-3436    TCGA-AK-3444    TCGA-AK-3451 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-AK-3455    TCGA-AK-3456    TCGA-AK-3458    TCGA-B0-4700    TCGA-B0-4706 
  "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-B0-4710    TCGA-B0-4712    TCGA-B0-4810    TCGA-B0-4811    TCGA-B0-4815 
"VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-B0-4816    TCGA-B0-4818    TCGA-B0-4823    TCGA-B0-4827    TCGA-B0-4842 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-B0-4852    TCGA-B0-4945    TCGA-B0-5075    TCGA-B0-5077    TCGA-B0-5080 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-B0-5081    TCGA-B0-5085    TCGA-B0-5088    TCGA-B0-5092    TCGA-B0-5094 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-B0-5095    TCGA-B0-5096    TCGA-B0-5097    TCGA-B0-5099    TCGA-B0-5100 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-B0-5102    TCGA-B0-5104    TCGA-B0-5106    TCGA-B0-5107    TCGA-B0-5108 
  "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-B0-5109    TCGA-B0-5110    TCGA-B0-5113    TCGA-B0-5115    TCGA-B0-5116 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-B0-5119    TCGA-B0-5120    TCGA-B0-5121    TCGA-B0-5399    TCGA-B0-5400 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-B0-5402    TCGA-B0-5691    TCGA-B0-5692    TCGA-B0-5693    TCGA-B0-5694 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-B0-5695    TCGA-B0-5696    TCGA-B0-5697    TCGA-B0-5698    TCGA-B0-5699 
  "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-B0-5701    TCGA-B0-5702    TCGA-B0-5703    TCGA-B0-5705    TCGA-B0-5706 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-B0-5707    TCGA-B0-5709    TCGA-B0-5710    TCGA-B0-5711    TCGA-B0-5713 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-B0-5812    TCGA-B2-3924    TCGA-B2-4098    TCGA-B2-4099    TCGA-B2-4101 
  "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-B2-4102    TCGA-B2-5633    TCGA-B2-5635    TCGA-B2-5641    TCGA-B4-5377 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-B8-4143    TCGA-B8-4146    TCGA-B8-4148    TCGA-B8-4151    TCGA-B8-4153 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-B8-4154    TCGA-B8-4620    TCGA-B8-4621    TCGA-B8-4622    TCGA-B8-5158 
  "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-B8-5159    TCGA-B8-5163    TCGA-B8-5164    TCGA-B8-5165    TCGA-B8-5545 
  "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-B8-5546    TCGA-B8-5549    TCGA-B8-5551    TCGA-B8-5552    TCGA-BP-4161 
"VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-BP-4162    TCGA-BP-4163    TCGA-BP-4164    TCGA-BP-4167    TCGA-BP-4770 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-BP-4782    TCGA-BP-4801    TCGA-BP-4960    TCGA-BP-4961    TCGA-BP-4962 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-BP-4963    TCGA-BP-4964    TCGA-BP-4967    TCGA-BP-4968    TCGA-BP-4970 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-BP-4971    TCGA-BP-4972    TCGA-BP-4973    TCGA-BP-4974    TCGA-BP-4975 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-BP-4976    TCGA-BP-4977    TCGA-BP-4981    TCGA-BP-4982    TCGA-BP-4983 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-BP-4985    TCGA-BP-4986    TCGA-BP-4987    TCGA-BP-4988    TCGA-BP-4989 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-BP-4991    TCGA-BP-4992    TCGA-BP-4993    TCGA-BP-4995    TCGA-BP-4998 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-BP-4999    TCGA-BP-5000    TCGA-BP-5001    TCGA-BP-5004    TCGA-BP-5006 
  "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-BP-5007    TCGA-BP-5008    TCGA-BP-5009    TCGA-BP-5010    TCGA-BP-5168 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-BP-5169    TCGA-BP-5170    TCGA-BP-5173    TCGA-BP-5174    TCGA-BP-5175 
  "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-BP-5176    TCGA-BP-5177    TCGA-BP-5178    TCGA-BP-5180    TCGA-BP-5182 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-BP-5183    TCGA-BP-5184    TCGA-BP-5185    TCGA-BP-5186    TCGA-BP-5187 
  "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-BP-5189    TCGA-BP-5190    TCGA-BP-5191    TCGA-BP-5192    TCGA-BP-5194 
"VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-BP-5195    TCGA-BP-5196    TCGA-BP-5198    TCGA-BP-5199    TCGA-BP-5200 
  "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-BP-5201    TCGA-BP-5202    TCGA-CJ-4634    TCGA-CJ-4636    TCGA-CJ-4637 
  "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-CJ-4638    TCGA-CJ-4639    TCGA-CJ-4640    TCGA-CJ-4641    TCGA-CJ-4643 
  "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-CJ-4644    TCGA-CJ-4882    TCGA-CJ-4897    TCGA-CJ-4899    TCGA-CJ-4901 
  "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-CJ-4902    TCGA-CJ-4903    TCGA-CJ-4904    TCGA-CJ-4905    TCGA-CJ-4907 
"VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-CJ-4908    TCGA-CJ-4912    TCGA-CJ-4913    TCGA-CJ-4916    TCGA-CJ-4918 
"VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-CJ-4920    TCGA-CJ-4923    TCGA-CJ-5671    TCGA-CJ-5672    TCGA-CJ-5675 
  "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-CJ-5676    TCGA-CJ-5677    TCGA-CJ-5678    TCGA-CJ-5679    TCGA-CJ-5680 
  "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-CJ-5681    TCGA-CJ-5682    TCGA-CJ-5683    TCGA-CJ-5684    TCGA-CJ-5686 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-CJ-6027    TCGA-CJ-6028    TCGA-CJ-6030    TCGA-CJ-6031    TCGA-CJ-6032 
  "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-CJ-6033    TCGA-CW-5580    TCGA-CW-5581    TCGA-CW-5583    TCGA-CW-5584 
  "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-CW-5585    TCGA-CW-5588    TCGA-CW-5589    TCGA-CW-5591    TCGA-CW-6087 
"VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-CW-6090    TCGA-CW-6093    TCGA-CZ-4853    TCGA-CZ-4856    TCGA-CZ-4859 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-CZ-4863    TCGA-CZ-4866    TCGA-CZ-5451    TCGA-CZ-5452    TCGA-CZ-5453 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-CZ-5454    TCGA-CZ-5456    TCGA-CZ-5457    TCGA-CZ-5458    TCGA-CZ-5459 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-CZ-5460    TCGA-CZ-5461    TCGA-CZ-5462    TCGA-CZ-5463    TCGA-CZ-5464 
  "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-CZ-5465    TCGA-CZ-5466    TCGA-CZ-5467    TCGA-CZ-5468    TCGA-CZ-5469 
  "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-CZ-5982    TCGA-CZ-5984    TCGA-CZ-5985    TCGA-CZ-5986    TCGA-CZ-5987 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-CZ-5988    TCGA-CZ-5989    TCGA-EU-5904    TCGA-EU-5905    TCGA-EU-5906 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-EU-5907 
  "VHL MUTATED" 
   TCGA-A3-3308    TCGA-A3-3311    TCGA-A3-3316    TCGA-A3-3317    TCGA-A3-3319 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-A3-3320    TCGA-A3-3322    TCGA-A3-3323    TCGA-A3-3324    TCGA-A3-3326 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-A3-3346    TCGA-A3-3347    TCGA-A3-3349    TCGA-A3-3351    TCGA-A3-3357 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-A3-3358    TCGA-A3-3362    TCGA-A3-3363    TCGA-A3-3365    TCGA-A3-3367 
"VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-A3-3370    TCGA-A3-3372    TCGA-A3-3373    TCGA-A3-3376    TCGA-A3-3378 
"VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-A3-3380    TCGA-A3-3382    TCGA-A3-3383    TCGA-A3-3385    TCGA-A3-3387 
"VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-AK-3429    TCGA-AK-3430    TCGA-AK-3436    TCGA-AK-3444    TCGA-AK-3451 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-AK-3455    TCGA-AK-3456    TCGA-AK-3458    TCGA-B0-4700    TCGA-B0-4706 
  "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-B0-4710    TCGA-B0-4712    TCGA-B0-4810    TCGA-B0-4811    TCGA-B0-4815 
"VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-B0-4816    TCGA-B0-4818    TCGA-B0-4823    TCGA-B0-4827    TCGA-B0-4842 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-B0-4852    TCGA-B0-4945    TCGA-B0-5075    TCGA-B0-5077    TCGA-B0-5080 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-B0-5081    TCGA-B0-5085    TCGA-B0-5088    TCGA-B0-5092    TCGA-B0-5094 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-B0-5095    TCGA-B0-5096    TCGA-B0-5097    TCGA-B0-5099    TCGA-B0-5100 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-B0-5102    TCGA-B0-5104    TCGA-B0-5106    TCGA-B0-5107    TCGA-B0-5108 
  "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-B0-5109    TCGA-B0-5110    TCGA-B0-5113    TCGA-B0-5115    TCGA-B0-5116 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-B0-5119    TCGA-B0-5120    TCGA-B0-5121    TCGA-B0-5399    TCGA-B0-5400 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-B0-5402    TCGA-B0-5691    TCGA-B0-5692    TCGA-B0-5693    TCGA-B0-5694 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-B0-5695    TCGA-B0-5696    TCGA-B0-5697    TCGA-B0-5698    TCGA-B0-5699 
  "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-B0-5701    TCGA-B0-5702    TCGA-B0-5703    TCGA-B0-5705    TCGA-B0-5706 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-B0-5707    TCGA-B0-5709    TCGA-B0-5710    TCGA-B0-5711    TCGA-B0-5713 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-B0-5812    TCGA-B2-3924    TCGA-B2-4098    TCGA-B2-4099    TCGA-B2-4101 
  "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-B2-4102    TCGA-B2-5633    TCGA-B2-5635    TCGA-B2-5641    TCGA-B4-5377 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-B8-4143    TCGA-B8-4146    TCGA-B8-4148    TCGA-B8-4151    TCGA-B8-4153 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-B8-4154    TCGA-B8-4620    TCGA-B8-4621    TCGA-B8-4622    TCGA-B8-5158 
  "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-B8-5159    TCGA-B8-5163    TCGA-B8-5164    TCGA-B8-5165    TCGA-B8-5545 
  "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-B8-5546    TCGA-B8-5549    TCGA-B8-5551    TCGA-B8-5552    TCGA-BP-4161 
"VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-BP-4162    TCGA-BP-4163    TCGA-BP-4164    TCGA-BP-4167    TCGA-BP-4770 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-BP-4782    TCGA-BP-4801    TCGA-BP-4960    TCGA-BP-4961    TCGA-BP-4962 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-BP-4963    TCGA-BP-4964    TCGA-BP-4967    TCGA-BP-4968    TCGA-BP-4970 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-BP-4971    TCGA-BP-4972    TCGA-BP-4973    TCGA-BP-4974    TCGA-BP-4975 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-BP-4976    TCGA-BP-4977    TCGA-BP-4981    TCGA-BP-4982    TCGA-BP-4983 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-BP-4985    TCGA-BP-4986    TCGA-BP-4987    TCGA-BP-4988    TCGA-BP-4989 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-BP-4991    TCGA-BP-4992    TCGA-BP-4993    TCGA-BP-4995    TCGA-BP-4998 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-BP-4999    TCGA-BP-5000    TCGA-BP-5001    TCGA-BP-5004    TCGA-BP-5006 
  "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-BP-5007    TCGA-BP-5008    TCGA-BP-5009    TCGA-BP-5010    TCGA-BP-5168 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-BP-5169    TCGA-BP-5170    TCGA-BP-5173    TCGA-BP-5174    TCGA-BP-5175 
  "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-BP-5176    TCGA-BP-5177    TCGA-BP-5178    TCGA-BP-5180    TCGA-BP-5182 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-BP-5183    TCGA-BP-5184    TCGA-BP-5185    TCGA-BP-5186    TCGA-BP-5187 
  "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-BP-5189    TCGA-BP-5190    TCGA-BP-5191    TCGA-BP-5192    TCGA-BP-5194 
"VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-BP-5195    TCGA-BP-5196    TCGA-BP-5198    TCGA-BP-5199    TCGA-BP-5200 
  "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-BP-5201    TCGA-BP-5202    TCGA-CJ-4634    TCGA-CJ-4636    TCGA-CJ-4637 
  "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-CJ-4638    TCGA-CJ-4639    TCGA-CJ-4640    TCGA-CJ-4641    TCGA-CJ-4643 
  "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-CJ-4644    TCGA-CJ-4882    TCGA-CJ-4897    TCGA-CJ-4899    TCGA-CJ-4901 
  "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-CJ-4902    TCGA-CJ-4903    TCGA-CJ-4904    TCGA-CJ-4905    TCGA-CJ-4907 
"VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-CJ-4908    TCGA-CJ-4912    TCGA-CJ-4913    TCGA-CJ-4916    TCGA-CJ-4918 
"VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-CJ-4920    TCGA-CJ-4923    TCGA-CJ-5671    TCGA-CJ-5672    TCGA-CJ-5675 
  "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-CJ-5676    TCGA-CJ-5677    TCGA-CJ-5678    TCGA-CJ-5679    TCGA-CJ-5680 
  "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-CJ-5681    TCGA-CJ-5682    TCGA-CJ-5683    TCGA-CJ-5684    TCGA-CJ-5686 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-CJ-6027    TCGA-CJ-6028    TCGA-CJ-6030    TCGA-CJ-6031    TCGA-CJ-6032 
  "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-CJ-6033    TCGA-CW-5580    TCGA-CW-5581    TCGA-CW-5583    TCGA-CW-5584 
  "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-CW-5585    TCGA-CW-5588    TCGA-CW-5589    TCGA-CW-5591    TCGA-CW-6087 
"VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-CW-6090    TCGA-CW-6093    TCGA-CZ-4853    TCGA-CZ-4856    TCGA-CZ-4859 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-CZ-4863    TCGA-CZ-4866    TCGA-CZ-5451    TCGA-CZ-5452    TCGA-CZ-5453 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-CZ-5454    TCGA-CZ-5456    TCGA-CZ-5457    TCGA-CZ-5458    TCGA-CZ-5459 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-CZ-5460    TCGA-CZ-5461    TCGA-CZ-5462    TCGA-CZ-5463    TCGA-CZ-5464 
  "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-CZ-5465    TCGA-CZ-5466    TCGA-CZ-5467    TCGA-CZ-5468    TCGA-CZ-5469 
  "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-CZ-5982    TCGA-CZ-5984    TCGA-CZ-5985    TCGA-CZ-5986    TCGA-CZ-5987 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-CZ-5988    TCGA-CZ-5989    TCGA-EU-5904    TCGA-EU-5905    TCGA-EU-5906 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-EU-5907 
  "VHL MUTATED" 
   TCGA-A3-3308    TCGA-A3-3311    TCGA-A3-3316    TCGA-A3-3317    TCGA-A3-3319 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-A3-3320    TCGA-A3-3322    TCGA-A3-3323    TCGA-A3-3324    TCGA-A3-3326 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-A3-3346    TCGA-A3-3347    TCGA-A3-3349    TCGA-A3-3351    TCGA-A3-3357 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-A3-3358    TCGA-A3-3362    TCGA-A3-3363    TCGA-A3-3365    TCGA-A3-3367 
"VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-A3-3370    TCGA-A3-3372    TCGA-A3-3373    TCGA-A3-3376    TCGA-A3-3378 
"VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-A3-3380    TCGA-A3-3382    TCGA-A3-3383    TCGA-A3-3385    TCGA-A3-3387 
"VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-AK-3429    TCGA-AK-3430    TCGA-AK-3436    TCGA-AK-3444    TCGA-AK-3451 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-AK-3455    TCGA-AK-3456    TCGA-AK-3458    TCGA-B0-4700    TCGA-B0-4706 
  "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-B0-4710    TCGA-B0-4712    TCGA-B0-4810    TCGA-B0-4811    TCGA-B0-4815 
"VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-B0-4816    TCGA-B0-4818    TCGA-B0-4823    TCGA-B0-4827    TCGA-B0-4842 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-B0-4852    TCGA-B0-4945    TCGA-B0-5075    TCGA-B0-5077    TCGA-B0-5080 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-B0-5081    TCGA-B0-5085    TCGA-B0-5088    TCGA-B0-5092    TCGA-B0-5094 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-B0-5095    TCGA-B0-5096    TCGA-B0-5097    TCGA-B0-5099    TCGA-B0-5100 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-B0-5102    TCGA-B0-5104    TCGA-B0-5106    TCGA-B0-5107    TCGA-B0-5108 
  "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-B0-5109    TCGA-B0-5110    TCGA-B0-5113    TCGA-B0-5115    TCGA-B0-5116 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-B0-5119    TCGA-B0-5120    TCGA-B0-5121    TCGA-B0-5399    TCGA-B0-5400 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-B0-5402    TCGA-B0-5691    TCGA-B0-5692    TCGA-B0-5693    TCGA-B0-5694 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-B0-5695    TCGA-B0-5696    TCGA-B0-5697    TCGA-B0-5698    TCGA-B0-5699 
  "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-B0-5701    TCGA-B0-5702    TCGA-B0-5703    TCGA-B0-5705    TCGA-B0-5706 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-B0-5707    TCGA-B0-5709    TCGA-B0-5710    TCGA-B0-5711    TCGA-B0-5713 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-B0-5812    TCGA-B2-3924    TCGA-B2-4098    TCGA-B2-4099    TCGA-B2-4101 
  "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-B2-4102    TCGA-B2-5633    TCGA-B2-5635    TCGA-B2-5641    TCGA-B4-5377 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-B8-4143    TCGA-B8-4146    TCGA-B8-4148    TCGA-B8-4151    TCGA-B8-4153 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-B8-4154    TCGA-B8-4620    TCGA-B8-4621    TCGA-B8-4622    TCGA-B8-5158 
  "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-B8-5159    TCGA-B8-5163    TCGA-B8-5164    TCGA-B8-5165    TCGA-B8-5545 
  "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-B8-5546    TCGA-B8-5549    TCGA-B8-5551    TCGA-B8-5552    TCGA-BP-4161 
"VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-BP-4162    TCGA-BP-4163    TCGA-BP-4164    TCGA-BP-4167    TCGA-BP-4770 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-BP-4782    TCGA-BP-4801    TCGA-BP-4960    TCGA-BP-4961    TCGA-BP-4962 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-BP-4963    TCGA-BP-4964    TCGA-BP-4967    TCGA-BP-4968    TCGA-BP-4970 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-BP-4971    TCGA-BP-4972    TCGA-BP-4973    TCGA-BP-4974    TCGA-BP-4975 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-BP-4976    TCGA-BP-4977    TCGA-BP-4981    TCGA-BP-4982    TCGA-BP-4983 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-BP-4985    TCGA-BP-4986    TCGA-BP-4987    TCGA-BP-4988    TCGA-BP-4989 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-BP-4991    TCGA-BP-4992    TCGA-BP-4993    TCGA-BP-4995    TCGA-BP-4998 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-BP-4999    TCGA-BP-5000    TCGA-BP-5001    TCGA-BP-5004    TCGA-BP-5006 
  "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-BP-5007    TCGA-BP-5008    TCGA-BP-5009    TCGA-BP-5010    TCGA-BP-5168 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-BP-5169    TCGA-BP-5170    TCGA-BP-5173    TCGA-BP-5174    TCGA-BP-5175 
  "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-BP-5176    TCGA-BP-5177    TCGA-BP-5178    TCGA-BP-5180    TCGA-BP-5182 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-BP-5183    TCGA-BP-5184    TCGA-BP-5185    TCGA-BP-5186    TCGA-BP-5187 
  "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-BP-5189    TCGA-BP-5190    TCGA-BP-5191    TCGA-BP-5192    TCGA-BP-5194 
"VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-BP-5195    TCGA-BP-5196    TCGA-BP-5198    TCGA-BP-5199    TCGA-BP-5200 
  "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-BP-5201    TCGA-BP-5202    TCGA-CJ-4634    TCGA-CJ-4636    TCGA-CJ-4637 
  "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-CJ-4638    TCGA-CJ-4639    TCGA-CJ-4640    TCGA-CJ-4641    TCGA-CJ-4643 
  "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-CJ-4644    TCGA-CJ-4882    TCGA-CJ-4897    TCGA-CJ-4899    TCGA-CJ-4901 
  "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-CJ-4902    TCGA-CJ-4903    TCGA-CJ-4904    TCGA-CJ-4905    TCGA-CJ-4907 
"VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-CJ-4908    TCGA-CJ-4912    TCGA-CJ-4913    TCGA-CJ-4916    TCGA-CJ-4918 
"VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-CJ-4920    TCGA-CJ-4923    TCGA-CJ-5671    TCGA-CJ-5672    TCGA-CJ-5675 
  "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-CJ-5676    TCGA-CJ-5677    TCGA-CJ-5678    TCGA-CJ-5679    TCGA-CJ-5680 
  "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-CJ-5681    TCGA-CJ-5682    TCGA-CJ-5683    TCGA-CJ-5684    TCGA-CJ-5686 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-CJ-6027    TCGA-CJ-6028    TCGA-CJ-6030    TCGA-CJ-6031    TCGA-CJ-6032 
  "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-CJ-6033    TCGA-CW-5580    TCGA-CW-5581    TCGA-CW-5583    TCGA-CW-5584 
  "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-CW-5585    TCGA-CW-5588    TCGA-CW-5589    TCGA-CW-5591    TCGA-CW-6087 
"VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-CW-6090    TCGA-CW-6093    TCGA-CZ-4853    TCGA-CZ-4856    TCGA-CZ-4859 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-CZ-4863    TCGA-CZ-4866    TCGA-CZ-5451    TCGA-CZ-5452    TCGA-CZ-5453 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-CZ-5454    TCGA-CZ-5456    TCGA-CZ-5457    TCGA-CZ-5458    TCGA-CZ-5459 
"VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" 
   TCGA-CZ-5460    TCGA-CZ-5461    TCGA-CZ-5462    TCGA-CZ-5463    TCGA-CZ-5464 
  "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-CZ-5465    TCGA-CZ-5466    TCGA-CZ-5467    TCGA-CZ-5468    TCGA-CZ-5469 
  "VHL MUTATED" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" "VHL WILD-TYPE" 
   TCGA-CZ-5982    TCGA-CZ-5984    TCGA-CZ-5985    TCGA-CZ-5986    TCGA-CZ-5987 
  "VHL MUTATED"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE"   "VHL MUTATED" 
   TCGA-CZ-5988    TCGA-CZ-5989    TCGA-EU-5904    TCGA-EU-5905    TCGA-EU-5906 
"VHL WILD-TYPE" "VHL WILD-TYPE"   "VHL MUTATED"   "VHL MUTATED" "VHL WILD-TYPE" 
   TCGA-EU-5907 
  "VHL MUTATED" 
[1] "hr=" "1.1"
D3V2, continuous
D3V3, binary
               cls
clus              0   1
  VHL MUTATED    54  84
  VHL WILD-TYPE  48 107
[1] "tbl2"
               cls
clus            [,1] [,2]
  VHL MUTATED     54   84
  VHL WILD-TYPE   48  107
        clus
vv       VHL MUTATED VHL WILD-TYPE
  FEMALE          54            48
  MALE            84           107
D3V4, continuous
D3V5, binary
               cls
clus              0   1
  VHL MUTATED   120  18
  VHL WILD-TYPE 134  21
[1] "tbl2"
               cls
clus            [,1] [,2]
  VHL MUTATED    120   18
  VHL WILD-TYPE  134   21
    clus
vv   VHL MUTATED VHL WILD-TYPE
  M0         120           134
  M1          18            21
               vv
clus            N0 N1 NX
  VHL MUTATED   60  4 74
  VHL WILD-TYPE 75  7 73
D3V6, multiclass
    clus
vv   VHL MUTATED VHL WILD-TYPE
  N0          60            75
  N1           4             7
  NX          74            73
D3V7, continuous
               vv
clus            STAGE I STAGE II STAGE III STAGE IV
  VHL MUTATED        76       10        34       18
  VHL WILD-TYPE      68       22        43       22
D3V8, multiclass
           clus
vv          VHL MUTATED VHL WILD-TYPE
  STAGE I            76            68
  STAGE II           10            22
  STAGE III          34            43
  STAGE IV           18            22

Clustering(4) Variable = BAP1 MUTATION ANALYSIS
D4V1, survival
                sevent
clus2              0   1
  BAP1 MUTATED    13  14
  BAP1 WILD-TYPE 201  63
  BAP1 MUTATED BAP1 WILD-TYPE 
            27            264 
  BAP1 MUTATED BAP1 WILD-TYPE 
            14             63 
$`BAP1 MUTATED`
TCGA-A3-3317 TCGA-AK-3451 TCGA-B0-5088 TCGA-B0-5092 TCGA-B0-5095 TCGA-B0-5096 
       49.02        48.69        14.24        15.09         8.05         2.20 
TCGA-B0-5097 TCGA-B0-5107 TCGA-B8-4143 TCGA-B8-4151 TCGA-B8-5551 TCGA-BP-4163 
        4.96        30.48        23.31         9.17         0.49        93.34 
TCGA-BP-4770 TCGA-BP-4962 TCGA-BP-5174 TCGA-BP-5182 TCGA-CJ-4636 TCGA-CJ-4637 
       10.82        58.68        74.20        38.30        63.25        73.22 
TCGA-CJ-4638 TCGA-CJ-4641 TCGA-CJ-4882 TCGA-CJ-4923 TCGA-CJ-5680 TCGA-CW-5580 
       14.17        54.61        61.91        18.81        25.25        64.57 
TCGA-CZ-4866 TCGA-CZ-5469 TCGA-CZ-5985 
       58.13        31.07        53.56 

$`BAP1 WILD-TYPE`
TCGA-A3-3308 TCGA-A3-3311 TCGA-A3-3316 TCGA-A3-3319 TCGA-A3-3320 TCGA-A3-3322 
        0.53        39.12        49.08        37.15        49.58        48.56 
TCGA-A3-3323 TCGA-A3-3324 TCGA-A3-3326 TCGA-A3-3346 TCGA-A3-3347 TCGA-A3-3349 
       36.33        38.99        37.38         4.50        36.07        45.53 
TCGA-A3-3351 TCGA-A3-3357 TCGA-A3-3358 TCGA-A3-3362 TCGA-A3-3363 TCGA-A3-3365 
       29.92        46.85        42.97        51.25        10.49        28.67 
TCGA-A3-3367 TCGA-A3-3370 TCGA-A3-3372 TCGA-A3-3373 TCGA-A3-3376 TCGA-A3-3378 
       34.65        25.51        24.16        10.98        35.18        20.71 
TCGA-A3-3380 TCGA-A3-3382 TCGA-A3-3383 TCGA-A3-3385 TCGA-A3-3387 TCGA-AK-3429 
       18.64        18.87        28.31        23.87        20.25        66.31 
TCGA-AK-3430 TCGA-AK-3436 TCGA-AK-3444 TCGA-AK-3455 TCGA-AK-3456 TCGA-AK-3458 
       15.78        67.17        48.36        22.45         1.51        38.40 
TCGA-B0-4700 TCGA-B0-4706 TCGA-B0-4710 TCGA-B0-4712 TCGA-B0-4810 TCGA-B0-4811 
       65.06         0.85         0.16        43.96         8.75        39.32 
TCGA-B0-4815 TCGA-B0-4816 TCGA-B0-4818 TCGA-B0-4823 TCGA-B0-4827 TCGA-B0-4842 
       49.02        35.54        14.01        14.93        29.06        53.79 
TCGA-B0-4852 TCGA-B0-4945 TCGA-B0-5075 TCGA-B0-5077 TCGA-B0-5080 TCGA-B0-5081 
       35.47        70.52        19.99        42.44         7.30         7.66 
TCGA-B0-5085 TCGA-B0-5094 TCGA-B0-5099 TCGA-B0-5100 TCGA-B0-5102 TCGA-B0-5104 
       25.28        10.95        15.95        62.89        90.84        90.44 
TCGA-B0-5106 TCGA-B0-5108 TCGA-B0-5109 TCGA-B0-5110 TCGA-B0-5113 TCGA-B0-5115 
       52.50         5.33        19.27        18.41         0.72         2.96 
TCGA-B0-5116 TCGA-B0-5119 TCGA-B0-5120 TCGA-B0-5121 TCGA-B0-5399 TCGA-B0-5400 
        3.39         1.58         1.81         6.12         6.25        22.26 
TCGA-B0-5402 TCGA-B0-5691 TCGA-B0-5692 TCGA-B0-5693 TCGA-B0-5694 TCGA-B0-5695 
        0.33        91.43        48.89        60.89        15.42        34.26 
TCGA-B0-5696 TCGA-B0-5697 TCGA-B0-5698 TCGA-B0-5699 TCGA-B0-5701 TCGA-B0-5702 
       31.04        37.32        71.70        79.73        41.95        38.07 
TCGA-B0-5703 TCGA-B0-5705 TCGA-B0-5706 TCGA-B0-5707 TCGA-B0-5709 TCGA-B0-5710 
        8.61       109.64        79.36        85.22        77.49        31.46 
TCGA-B0-5711 TCGA-B0-5713 TCGA-B0-5812 TCGA-B2-3924 TCGA-B2-4098 TCGA-B2-4099 
       83.93        61.28        76.41         6.38         1.64         3.62 
TCGA-B2-4101 TCGA-B2-4102 TCGA-B2-5633 TCGA-B2-5635 TCGA-B2-5641 TCGA-B4-5377 
        2.96         0.49         7.04        10.36         5.52         9.57 
TCGA-B8-4146 TCGA-B8-4148 TCGA-B8-4153 TCGA-B8-4154 TCGA-B8-4620 TCGA-B8-4621 
       16.80        12.46        13.28         8.38         7.43         7.07 
TCGA-B8-4622 TCGA-B8-5158 TCGA-B8-5159 TCGA-B8-5163 TCGA-B8-5164 TCGA-B8-5165 
        5.95         2.96         4.37         0.13         0.76         0.26 
TCGA-B8-5545 TCGA-B8-5546 TCGA-B8-5549 TCGA-B8-5552 TCGA-BP-4161 TCGA-BP-4162 
        8.15         0.46         6.38         7.20        90.28       101.06 
TCGA-BP-4164 TCGA-BP-4167 TCGA-BP-4782 TCGA-BP-4801 TCGA-BP-4960 TCGA-BP-4961 
       32.61        89.36        11.64        36.95        71.41        63.62 
TCGA-BP-4963 TCGA-BP-4964 TCGA-BP-4967 TCGA-BP-4968 TCGA-BP-4970 TCGA-BP-4971 
       60.30        61.22         6.71        57.37        14.20        48.89 
TCGA-BP-4972 TCGA-BP-4973 TCGA-BP-4974 TCGA-BP-4975 TCGA-BP-4976 TCGA-BP-4977 
       49.35        45.50         7.23        47.11        53.65        14.93 
TCGA-BP-4981 TCGA-BP-4982 TCGA-BP-4983 TCGA-BP-4985 TCGA-BP-4986 TCGA-BP-4987 
       36.07        33.30        46.42        31.27        25.81        36.95 
TCGA-BP-4988 TCGA-BP-4989 TCGA-BP-4991 TCGA-BP-4992 TCGA-BP-4993 TCGA-BP-4995 
       27.19         3.85        34.32        16.44         5.79        45.07 
TCGA-BP-4998 TCGA-BP-4999 TCGA-BP-5000 TCGA-BP-5001 TCGA-BP-5004 TCGA-BP-5006 
       30.61        41.62        18.51        38.70        37.02        27.62 
TCGA-BP-5007 TCGA-BP-5008 TCGA-BP-5009 TCGA-BP-5010 TCGA-BP-5168 TCGA-BP-5169 
       37.48        35.21        35.90        28.83        48.10         6.31 
TCGA-BP-5170 TCGA-BP-5173 TCGA-BP-5175 TCGA-BP-5176 TCGA-BP-5177 TCGA-BP-5178 
       79.27         1.78        30.64        52.27         9.63        62.86 
TCGA-BP-5180 TCGA-BP-5183 TCGA-BP-5184 TCGA-BP-5185 TCGA-BP-5186 TCGA-BP-5187 
       62.20        36.23        37.25        37.22        22.78        13.35 
TCGA-BP-5189 TCGA-BP-5190 TCGA-BP-5191 TCGA-BP-5192 TCGA-BP-5194 TCGA-BP-5195 
       27.02        33.21        31.76        23.47        13.41        24.59 
TCGA-BP-5196 TCGA-BP-5198 TCGA-BP-5199 TCGA-BP-5200 TCGA-BP-5201 TCGA-BP-5202 
       33.47        19.82        44.52        28.96        31.27         0.95 
TCGA-CJ-4634 TCGA-CJ-4639 TCGA-CJ-4640 TCGA-CJ-4643 TCGA-CJ-4644 TCGA-CJ-4897 
       59.84        75.88        65.69        58.92        11.05        59.44 
TCGA-CJ-4899 TCGA-CJ-4901 TCGA-CJ-4902 TCGA-CJ-4903 TCGA-CJ-4904 TCGA-CJ-4905 
       50.20        47.67        49.94        51.25        58.92        49.15 
TCGA-CJ-4907 TCGA-CJ-4908 TCGA-CJ-4912 TCGA-CJ-4913 TCGA-CJ-4916 TCGA-CJ-4918 
       49.25        50.30        54.44        38.56        45.11         3.02 
TCGA-CJ-4920 TCGA-CJ-5671 TCGA-CJ-5672 TCGA-CJ-5675 TCGA-CJ-5676 TCGA-CJ-5677 
        4.57        63.85        72.00        79.86        84.66        25.71 
TCGA-CJ-5678 TCGA-CJ-5679 TCGA-CJ-5681 TCGA-CJ-5682 TCGA-CJ-5683 TCGA-CJ-5684 
       18.84        22.29        18.12        61.91        62.10        73.32 
TCGA-CJ-5686 TCGA-CJ-6027 TCGA-CJ-6028 TCGA-CJ-6030 TCGA-CJ-6031 TCGA-CJ-6032 
       67.00        60.99        53.42        75.55        62.63        83.77 
TCGA-CJ-6033 TCGA-CW-5581 TCGA-CW-5583 TCGA-CW-5584 TCGA-CW-5585 TCGA-CW-5588 
        7.36        92.02        81.83         5.39        85.78        66.28 
TCGA-CW-5589 TCGA-CW-5591 TCGA-CW-6087 TCGA-CW-6090 TCGA-CW-6093 TCGA-CZ-4853 
       78.15        74.63         1.35        75.88        79.89        25.45 
TCGA-CZ-4856 TCGA-CZ-4859 TCGA-CZ-4863 TCGA-CZ-5451 TCGA-CZ-5452 TCGA-CZ-5453 
        0.59        58.75        55.56        54.84        51.16         0.82 
TCGA-CZ-5454 TCGA-CZ-5456 TCGA-CZ-5457 TCGA-CZ-5458 TCGA-CZ-5459 TCGA-CZ-5460 
       23.74        51.22        50.86        51.22        49.81        47.01 
TCGA-CZ-5461 TCGA-CZ-5462 TCGA-CZ-5463 TCGA-CZ-5464 TCGA-CZ-5465 TCGA-CZ-5466 
       10.85        10.22        21.76        49.05        45.27        22.52 
TCGA-CZ-5467 TCGA-CZ-5468 TCGA-CZ-5982 TCGA-CZ-5984 TCGA-CZ-5986 TCGA-CZ-5987 
        2.40         1.94        67.13        49.02        12.26        14.30 
TCGA-CZ-5988 TCGA-CZ-5989 TCGA-EU-5904 TCGA-EU-5905 TCGA-EU-5906 TCGA-EU-5907 
       22.78        52.57        18.08         3.88         6.77         4.14 

  BAP1 MUTATED BAP1 WILD-TYPE 
          0.49           0.13 
  BAP1 MUTATED BAP1 WILD-TYPE 
         93.34         109.64 
  BAP1 MUTATED BAP1 WILD-TYPE 
         31.07          34.29 
[1] "0.5 - 93.3 (31.1)"  "0.1 - 109.6 (34.3)"
    TCGA-A3-3308     TCGA-A3-3311     TCGA-A3-3316     TCGA-A3-3317 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" 
    TCGA-A3-3319     TCGA-A3-3320     TCGA-A3-3322     TCGA-A3-3323 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-A3-3324     TCGA-A3-3326     TCGA-A3-3346     TCGA-A3-3347 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-A3-3349     TCGA-A3-3351     TCGA-A3-3357     TCGA-A3-3358 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-A3-3362     TCGA-A3-3363     TCGA-A3-3365     TCGA-A3-3367 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-A3-3370     TCGA-A3-3372     TCGA-A3-3373     TCGA-A3-3376 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-A3-3378     TCGA-A3-3380     TCGA-A3-3382     TCGA-A3-3383 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-A3-3385     TCGA-A3-3387     TCGA-AK-3429     TCGA-AK-3430 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-AK-3436     TCGA-AK-3444     TCGA-AK-3451     TCGA-AK-3455 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-AK-3456     TCGA-AK-3458     TCGA-B0-4700     TCGA-B0-4706 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-4710     TCGA-B0-4712     TCGA-B0-4810     TCGA-B0-4811 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-4815     TCGA-B0-4816     TCGA-B0-4818     TCGA-B0-4823 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-4827     TCGA-B0-4842     TCGA-B0-4852     TCGA-B0-4945 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5075     TCGA-B0-5077     TCGA-B0-5080     TCGA-B0-5081 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5085     TCGA-B0-5088     TCGA-B0-5092     TCGA-B0-5094 
"BAP1 WILD-TYPE"   "BAP1 MUTATED"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-B0-5095     TCGA-B0-5096     TCGA-B0-5097     TCGA-B0-5099 
  "BAP1 MUTATED"   "BAP1 MUTATED"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-B0-5100     TCGA-B0-5102     TCGA-B0-5104     TCGA-B0-5106 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5107     TCGA-B0-5108     TCGA-B0-5109     TCGA-B0-5110 
  "BAP1 MUTATED" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5113     TCGA-B0-5115     TCGA-B0-5116     TCGA-B0-5119 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5120     TCGA-B0-5121     TCGA-B0-5399     TCGA-B0-5400 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5402     TCGA-B0-5691     TCGA-B0-5692     TCGA-B0-5693 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5694     TCGA-B0-5695     TCGA-B0-5696     TCGA-B0-5697 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5698     TCGA-B0-5699     TCGA-B0-5701     TCGA-B0-5702 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5703     TCGA-B0-5705     TCGA-B0-5706     TCGA-B0-5707 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5709     TCGA-B0-5710     TCGA-B0-5711     TCGA-B0-5713 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5812     TCGA-B2-3924     TCGA-B2-4098     TCGA-B2-4099 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B2-4101     TCGA-B2-4102     TCGA-B2-5633     TCGA-B2-5635 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B2-5641     TCGA-B4-5377     TCGA-B8-4143     TCGA-B8-4146 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-B8-4148     TCGA-B8-4151     TCGA-B8-4153     TCGA-B8-4154 
"BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B8-4620     TCGA-B8-4621     TCGA-B8-4622     TCGA-B8-5158 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B8-5159     TCGA-B8-5163     TCGA-B8-5164     TCGA-B8-5165 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B8-5545     TCGA-B8-5546     TCGA-B8-5549     TCGA-B8-5551 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" 
    TCGA-B8-5552     TCGA-BP-4161     TCGA-BP-4162     TCGA-BP-4163 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" 
    TCGA-BP-4164     TCGA-BP-4167     TCGA-BP-4770     TCGA-BP-4782 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-BP-4801     TCGA-BP-4960     TCGA-BP-4961     TCGA-BP-4962 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" 
    TCGA-BP-4963     TCGA-BP-4964     TCGA-BP-4967     TCGA-BP-4968 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-4970     TCGA-BP-4971     TCGA-BP-4972     TCGA-BP-4973 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-4974     TCGA-BP-4975     TCGA-BP-4976     TCGA-BP-4977 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-4981     TCGA-BP-4982     TCGA-BP-4983     TCGA-BP-4985 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-4986     TCGA-BP-4987     TCGA-BP-4988     TCGA-BP-4989 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-4991     TCGA-BP-4992     TCGA-BP-4993     TCGA-BP-4995 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-4998     TCGA-BP-4999     TCGA-BP-5000     TCGA-BP-5001 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5004     TCGA-BP-5006     TCGA-BP-5007     TCGA-BP-5008 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5009     TCGA-BP-5010     TCGA-BP-5168     TCGA-BP-5169 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5170     TCGA-BP-5173     TCGA-BP-5174     TCGA-BP-5175 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-BP-5176     TCGA-BP-5177     TCGA-BP-5178     TCGA-BP-5180 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5182     TCGA-BP-5183     TCGA-BP-5184     TCGA-BP-5185 
  "BAP1 MUTATED" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5186     TCGA-BP-5187     TCGA-BP-5189     TCGA-BP-5190 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5191     TCGA-BP-5192     TCGA-BP-5194     TCGA-BP-5195 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5196     TCGA-BP-5198     TCGA-BP-5199     TCGA-BP-5200 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5201     TCGA-BP-5202     TCGA-CJ-4634     TCGA-CJ-4636 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" 
    TCGA-CJ-4637     TCGA-CJ-4638     TCGA-CJ-4639     TCGA-CJ-4640 
  "BAP1 MUTATED"   "BAP1 MUTATED" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CJ-4641     TCGA-CJ-4643     TCGA-CJ-4644     TCGA-CJ-4882 
  "BAP1 MUTATED" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" 
    TCGA-CJ-4897     TCGA-CJ-4899     TCGA-CJ-4901     TCGA-CJ-4902 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CJ-4903     TCGA-CJ-4904     TCGA-CJ-4905     TCGA-CJ-4907 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CJ-4908     TCGA-CJ-4912     TCGA-CJ-4913     TCGA-CJ-4916 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CJ-4918     TCGA-CJ-4920     TCGA-CJ-4923     TCGA-CJ-5671 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-CJ-5672     TCGA-CJ-5675     TCGA-CJ-5676     TCGA-CJ-5677 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CJ-5678     TCGA-CJ-5679     TCGA-CJ-5680     TCGA-CJ-5681 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-CJ-5682     TCGA-CJ-5683     TCGA-CJ-5684     TCGA-CJ-5686 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CJ-6027     TCGA-CJ-6028     TCGA-CJ-6030     TCGA-CJ-6031 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CJ-6032     TCGA-CJ-6033     TCGA-CW-5580     TCGA-CW-5581 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-CW-5583     TCGA-CW-5584     TCGA-CW-5585     TCGA-CW-5588 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CW-5589     TCGA-CW-5591     TCGA-CW-6087     TCGA-CW-6090 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CW-6093     TCGA-CZ-4853     TCGA-CZ-4856     TCGA-CZ-4859 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CZ-4863     TCGA-CZ-4866     TCGA-CZ-5451     TCGA-CZ-5452 
"BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CZ-5453     TCGA-CZ-5454     TCGA-CZ-5456     TCGA-CZ-5457 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CZ-5458     TCGA-CZ-5459     TCGA-CZ-5460     TCGA-CZ-5461 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CZ-5462     TCGA-CZ-5463     TCGA-CZ-5464     TCGA-CZ-5465 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CZ-5466     TCGA-CZ-5467     TCGA-CZ-5468     TCGA-CZ-5469 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" 
    TCGA-CZ-5982     TCGA-CZ-5984     TCGA-CZ-5985     TCGA-CZ-5986 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-CZ-5987     TCGA-CZ-5988     TCGA-CZ-5989     TCGA-EU-5904 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-EU-5905     TCGA-EU-5906     TCGA-EU-5907 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-A3-3308     TCGA-A3-3311     TCGA-A3-3316     TCGA-A3-3317 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" 
    TCGA-A3-3319     TCGA-A3-3320     TCGA-A3-3322     TCGA-A3-3323 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-A3-3324     TCGA-A3-3326     TCGA-A3-3346     TCGA-A3-3347 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-A3-3349     TCGA-A3-3351     TCGA-A3-3357     TCGA-A3-3358 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-A3-3362     TCGA-A3-3363     TCGA-A3-3365     TCGA-A3-3367 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-A3-3370     TCGA-A3-3372     TCGA-A3-3373     TCGA-A3-3376 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-A3-3378     TCGA-A3-3380     TCGA-A3-3382     TCGA-A3-3383 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-A3-3385     TCGA-A3-3387     TCGA-AK-3429     TCGA-AK-3430 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-AK-3436     TCGA-AK-3444     TCGA-AK-3451     TCGA-AK-3455 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-AK-3456     TCGA-AK-3458     TCGA-B0-4700     TCGA-B0-4706 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-4710     TCGA-B0-4712     TCGA-B0-4810     TCGA-B0-4811 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-4815     TCGA-B0-4816     TCGA-B0-4818     TCGA-B0-4823 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-4827     TCGA-B0-4842     TCGA-B0-4852     TCGA-B0-4945 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5075     TCGA-B0-5077     TCGA-B0-5080     TCGA-B0-5081 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5085     TCGA-B0-5088     TCGA-B0-5092     TCGA-B0-5094 
"BAP1 WILD-TYPE"   "BAP1 MUTATED"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-B0-5095     TCGA-B0-5096     TCGA-B0-5097     TCGA-B0-5099 
  "BAP1 MUTATED"   "BAP1 MUTATED"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-B0-5100     TCGA-B0-5102     TCGA-B0-5104     TCGA-B0-5106 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5107     TCGA-B0-5108     TCGA-B0-5109     TCGA-B0-5110 
  "BAP1 MUTATED" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5113     TCGA-B0-5115     TCGA-B0-5116     TCGA-B0-5119 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5120     TCGA-B0-5121     TCGA-B0-5399     TCGA-B0-5400 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5402     TCGA-B0-5691     TCGA-B0-5692     TCGA-B0-5693 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5694     TCGA-B0-5695     TCGA-B0-5696     TCGA-B0-5697 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5698     TCGA-B0-5699     TCGA-B0-5701     TCGA-B0-5702 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5703     TCGA-B0-5705     TCGA-B0-5706     TCGA-B0-5707 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5709     TCGA-B0-5710     TCGA-B0-5711     TCGA-B0-5713 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5812     TCGA-B2-3924     TCGA-B2-4098     TCGA-B2-4099 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B2-4101     TCGA-B2-4102     TCGA-B2-5633     TCGA-B2-5635 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B2-5641     TCGA-B4-5377     TCGA-B8-4143     TCGA-B8-4146 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-B8-4148     TCGA-B8-4151     TCGA-B8-4153     TCGA-B8-4154 
"BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B8-4620     TCGA-B8-4621     TCGA-B8-4622     TCGA-B8-5158 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B8-5159     TCGA-B8-5163     TCGA-B8-5164     TCGA-B8-5165 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B8-5545     TCGA-B8-5546     TCGA-B8-5549     TCGA-B8-5551 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" 
    TCGA-B8-5552     TCGA-BP-4161     TCGA-BP-4162     TCGA-BP-4163 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" 
    TCGA-BP-4164     TCGA-BP-4167     TCGA-BP-4770     TCGA-BP-4782 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-BP-4801     TCGA-BP-4960     TCGA-BP-4961     TCGA-BP-4962 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" 
    TCGA-BP-4963     TCGA-BP-4964     TCGA-BP-4967     TCGA-BP-4968 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-4970     TCGA-BP-4971     TCGA-BP-4972     TCGA-BP-4973 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-4974     TCGA-BP-4975     TCGA-BP-4976     TCGA-BP-4977 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-4981     TCGA-BP-4982     TCGA-BP-4983     TCGA-BP-4985 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-4986     TCGA-BP-4987     TCGA-BP-4988     TCGA-BP-4989 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-4991     TCGA-BP-4992     TCGA-BP-4993     TCGA-BP-4995 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-4998     TCGA-BP-4999     TCGA-BP-5000     TCGA-BP-5001 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5004     TCGA-BP-5006     TCGA-BP-5007     TCGA-BP-5008 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5009     TCGA-BP-5010     TCGA-BP-5168     TCGA-BP-5169 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5170     TCGA-BP-5173     TCGA-BP-5174     TCGA-BP-5175 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-BP-5176     TCGA-BP-5177     TCGA-BP-5178     TCGA-BP-5180 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5182     TCGA-BP-5183     TCGA-BP-5184     TCGA-BP-5185 
  "BAP1 MUTATED" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5186     TCGA-BP-5187     TCGA-BP-5189     TCGA-BP-5190 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5191     TCGA-BP-5192     TCGA-BP-5194     TCGA-BP-5195 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5196     TCGA-BP-5198     TCGA-BP-5199     TCGA-BP-5200 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5201     TCGA-BP-5202     TCGA-CJ-4634     TCGA-CJ-4636 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" 
    TCGA-CJ-4637     TCGA-CJ-4638     TCGA-CJ-4639     TCGA-CJ-4640 
  "BAP1 MUTATED"   "BAP1 MUTATED" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CJ-4641     TCGA-CJ-4643     TCGA-CJ-4644     TCGA-CJ-4882 
  "BAP1 MUTATED" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" 
    TCGA-CJ-4897     TCGA-CJ-4899     TCGA-CJ-4901     TCGA-CJ-4902 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CJ-4903     TCGA-CJ-4904     TCGA-CJ-4905     TCGA-CJ-4907 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CJ-4908     TCGA-CJ-4912     TCGA-CJ-4913     TCGA-CJ-4916 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CJ-4918     TCGA-CJ-4920     TCGA-CJ-4923     TCGA-CJ-5671 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-CJ-5672     TCGA-CJ-5675     TCGA-CJ-5676     TCGA-CJ-5677 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CJ-5678     TCGA-CJ-5679     TCGA-CJ-5680     TCGA-CJ-5681 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-CJ-5682     TCGA-CJ-5683     TCGA-CJ-5684     TCGA-CJ-5686 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CJ-6027     TCGA-CJ-6028     TCGA-CJ-6030     TCGA-CJ-6031 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CJ-6032     TCGA-CJ-6033     TCGA-CW-5580     TCGA-CW-5581 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-CW-5583     TCGA-CW-5584     TCGA-CW-5585     TCGA-CW-5588 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CW-5589     TCGA-CW-5591     TCGA-CW-6087     TCGA-CW-6090 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CW-6093     TCGA-CZ-4853     TCGA-CZ-4856     TCGA-CZ-4859 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CZ-4863     TCGA-CZ-4866     TCGA-CZ-5451     TCGA-CZ-5452 
"BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CZ-5453     TCGA-CZ-5454     TCGA-CZ-5456     TCGA-CZ-5457 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CZ-5458     TCGA-CZ-5459     TCGA-CZ-5460     TCGA-CZ-5461 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CZ-5462     TCGA-CZ-5463     TCGA-CZ-5464     TCGA-CZ-5465 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CZ-5466     TCGA-CZ-5467     TCGA-CZ-5468     TCGA-CZ-5469 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" 
    TCGA-CZ-5982     TCGA-CZ-5984     TCGA-CZ-5985     TCGA-CZ-5986 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-CZ-5987     TCGA-CZ-5988     TCGA-CZ-5989     TCGA-EU-5904 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-EU-5905     TCGA-EU-5906     TCGA-EU-5907 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-A3-3308     TCGA-A3-3311     TCGA-A3-3316     TCGA-A3-3317 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" 
    TCGA-A3-3319     TCGA-A3-3320     TCGA-A3-3322     TCGA-A3-3323 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-A3-3324     TCGA-A3-3326     TCGA-A3-3346     TCGA-A3-3347 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-A3-3349     TCGA-A3-3351     TCGA-A3-3357     TCGA-A3-3358 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-A3-3362     TCGA-A3-3363     TCGA-A3-3365     TCGA-A3-3367 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-A3-3370     TCGA-A3-3372     TCGA-A3-3373     TCGA-A3-3376 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-A3-3378     TCGA-A3-3380     TCGA-A3-3382     TCGA-A3-3383 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-A3-3385     TCGA-A3-3387     TCGA-AK-3429     TCGA-AK-3430 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-AK-3436     TCGA-AK-3444     TCGA-AK-3451     TCGA-AK-3455 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-AK-3456     TCGA-AK-3458     TCGA-B0-4700     TCGA-B0-4706 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-4710     TCGA-B0-4712     TCGA-B0-4810     TCGA-B0-4811 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-4815     TCGA-B0-4816     TCGA-B0-4818     TCGA-B0-4823 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-4827     TCGA-B0-4842     TCGA-B0-4852     TCGA-B0-4945 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5075     TCGA-B0-5077     TCGA-B0-5080     TCGA-B0-5081 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5085     TCGA-B0-5088     TCGA-B0-5092     TCGA-B0-5094 
"BAP1 WILD-TYPE"   "BAP1 MUTATED"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-B0-5095     TCGA-B0-5096     TCGA-B0-5097     TCGA-B0-5099 
  "BAP1 MUTATED"   "BAP1 MUTATED"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-B0-5100     TCGA-B0-5102     TCGA-B0-5104     TCGA-B0-5106 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5107     TCGA-B0-5108     TCGA-B0-5109     TCGA-B0-5110 
  "BAP1 MUTATED" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5113     TCGA-B0-5115     TCGA-B0-5116     TCGA-B0-5119 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5120     TCGA-B0-5121     TCGA-B0-5399     TCGA-B0-5400 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5402     TCGA-B0-5691     TCGA-B0-5692     TCGA-B0-5693 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5694     TCGA-B0-5695     TCGA-B0-5696     TCGA-B0-5697 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5698     TCGA-B0-5699     TCGA-B0-5701     TCGA-B0-5702 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5703     TCGA-B0-5705     TCGA-B0-5706     TCGA-B0-5707 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5709     TCGA-B0-5710     TCGA-B0-5711     TCGA-B0-5713 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B0-5812     TCGA-B2-3924     TCGA-B2-4098     TCGA-B2-4099 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B2-4101     TCGA-B2-4102     TCGA-B2-5633     TCGA-B2-5635 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B2-5641     TCGA-B4-5377     TCGA-B8-4143     TCGA-B8-4146 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-B8-4148     TCGA-B8-4151     TCGA-B8-4153     TCGA-B8-4154 
"BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B8-4620     TCGA-B8-4621     TCGA-B8-4622     TCGA-B8-5158 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B8-5159     TCGA-B8-5163     TCGA-B8-5164     TCGA-B8-5165 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-B8-5545     TCGA-B8-5546     TCGA-B8-5549     TCGA-B8-5551 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" 
    TCGA-B8-5552     TCGA-BP-4161     TCGA-BP-4162     TCGA-BP-4163 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" 
    TCGA-BP-4164     TCGA-BP-4167     TCGA-BP-4770     TCGA-BP-4782 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-BP-4801     TCGA-BP-4960     TCGA-BP-4961     TCGA-BP-4962 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" 
    TCGA-BP-4963     TCGA-BP-4964     TCGA-BP-4967     TCGA-BP-4968 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-4970     TCGA-BP-4971     TCGA-BP-4972     TCGA-BP-4973 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-4974     TCGA-BP-4975     TCGA-BP-4976     TCGA-BP-4977 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-4981     TCGA-BP-4982     TCGA-BP-4983     TCGA-BP-4985 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-4986     TCGA-BP-4987     TCGA-BP-4988     TCGA-BP-4989 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-4991     TCGA-BP-4992     TCGA-BP-4993     TCGA-BP-4995 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-4998     TCGA-BP-4999     TCGA-BP-5000     TCGA-BP-5001 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5004     TCGA-BP-5006     TCGA-BP-5007     TCGA-BP-5008 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5009     TCGA-BP-5010     TCGA-BP-5168     TCGA-BP-5169 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5170     TCGA-BP-5173     TCGA-BP-5174     TCGA-BP-5175 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-BP-5176     TCGA-BP-5177     TCGA-BP-5178     TCGA-BP-5180 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5182     TCGA-BP-5183     TCGA-BP-5184     TCGA-BP-5185 
  "BAP1 MUTATED" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5186     TCGA-BP-5187     TCGA-BP-5189     TCGA-BP-5190 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5191     TCGA-BP-5192     TCGA-BP-5194     TCGA-BP-5195 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5196     TCGA-BP-5198     TCGA-BP-5199     TCGA-BP-5200 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-BP-5201     TCGA-BP-5202     TCGA-CJ-4634     TCGA-CJ-4636 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" 
    TCGA-CJ-4637     TCGA-CJ-4638     TCGA-CJ-4639     TCGA-CJ-4640 
  "BAP1 MUTATED"   "BAP1 MUTATED" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CJ-4641     TCGA-CJ-4643     TCGA-CJ-4644     TCGA-CJ-4882 
  "BAP1 MUTATED" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" 
    TCGA-CJ-4897     TCGA-CJ-4899     TCGA-CJ-4901     TCGA-CJ-4902 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CJ-4903     TCGA-CJ-4904     TCGA-CJ-4905     TCGA-CJ-4907 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CJ-4908     TCGA-CJ-4912     TCGA-CJ-4913     TCGA-CJ-4916 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CJ-4918     TCGA-CJ-4920     TCGA-CJ-4923     TCGA-CJ-5671 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-CJ-5672     TCGA-CJ-5675     TCGA-CJ-5676     TCGA-CJ-5677 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CJ-5678     TCGA-CJ-5679     TCGA-CJ-5680     TCGA-CJ-5681 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-CJ-5682     TCGA-CJ-5683     TCGA-CJ-5684     TCGA-CJ-5686 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CJ-6027     TCGA-CJ-6028     TCGA-CJ-6030     TCGA-CJ-6031 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CJ-6032     TCGA-CJ-6033     TCGA-CW-5580     TCGA-CW-5581 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-CW-5583     TCGA-CW-5584     TCGA-CW-5585     TCGA-CW-5588 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CW-5589     TCGA-CW-5591     TCGA-CW-6087     TCGA-CW-6090 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CW-6093     TCGA-CZ-4853     TCGA-CZ-4856     TCGA-CZ-4859 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CZ-4863     TCGA-CZ-4866     TCGA-CZ-5451     TCGA-CZ-5452 
"BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CZ-5453     TCGA-CZ-5454     TCGA-CZ-5456     TCGA-CZ-5457 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CZ-5458     TCGA-CZ-5459     TCGA-CZ-5460     TCGA-CZ-5461 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CZ-5462     TCGA-CZ-5463     TCGA-CZ-5464     TCGA-CZ-5465 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CZ-5466     TCGA-CZ-5467     TCGA-CZ-5468     TCGA-CZ-5469 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" 
    TCGA-CZ-5982     TCGA-CZ-5984     TCGA-CZ-5985     TCGA-CZ-5986 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE"   "BAP1 MUTATED" "BAP1 WILD-TYPE" 
    TCGA-CZ-5987     TCGA-CZ-5988     TCGA-CZ-5989     TCGA-EU-5904 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-EU-5905     TCGA-EU-5906     TCGA-EU-5907 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
[1] "hr=" "2"  
D4V2, continuous
D4V3, binary
                cls
clus               0   1
  BAP1 MUTATED    17  10
  BAP1 WILD-TYPE  85 181
[1] "tbl2"
                cls
clus             [,1] [,2]
  BAP1 MUTATED     17   10
  BAP1 WILD-TYPE   85  181
        clus
vv       BAP1 MUTATED BAP1 WILD-TYPE
  FEMALE           17             85
  MALE             10            181
D4V4, continuous
[1] "Remove cluster labels:" "BAP1 MUTATED"          
clus
  BAP1 MUTATED BAP1 WILD-TYPE 
             1             10 
    TCGA-AK-3430     TCGA-B4-5377     TCGA-CZ-4856     TCGA-CZ-5456 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-CZ-5457     TCGA-CZ-5465     TCGA-CZ-5982     TCGA-EU-5904 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
    TCGA-EU-5905     TCGA-EU-5907 
"BAP1 WILD-TYPE" "BAP1 WILD-TYPE" 
D4V5, binary
                cls
clus               0   1
  BAP1 MUTATED    18   9
  BAP1 WILD-TYPE 236  30
[1] "tbl2"
                cls
clus             [,1] [,2]
  BAP1 MUTATED     18    9
  BAP1 WILD-TYPE  236   30
    clus
vv   BAP1 MUTATED BAP1 WILD-TYPE
  M0           18            236
  M1            9             30
                vv
clus              N0  N1  NX
  BAP1 MUTATED    16   2   9
  BAP1 WILD-TYPE 119   9 138
D4V6, multiclass
    clus
vv   BAP1 MUTATED BAP1 WILD-TYPE
  N0           16            119
  N1            2              9
  NX            9            138
D4V7, continuous
                vv
clus             STAGE I STAGE II STAGE III STAGE IV
  BAP1 MUTATED         5        5         7       10
  BAP1 WILD-TYPE     139       27        70       30
D4V8, multiclass
           clus
vv          BAP1 MUTATED BAP1 WILD-TYPE
  STAGE I              5            139
  STAGE II             5             27
  STAGE III            7             70
  STAGE IV            10             30

Clustering(5) Variable = SETD2 MUTATION ANALYSIS
D5V1, survival
                 sevent
clus2               0   1
  SETD2 MUTATED    23  10
  SETD2 WILD-TYPE 191  67
  SETD2 MUTATED SETD2 WILD-TYPE 
             33             258 
  SETD2 MUTATED SETD2 WILD-TYPE 
             10              67 
$`SETD2 MUTATED`
TCGA-A3-3311 TCGA-A3-3358 TCGA-A3-3383 TCGA-AK-3455 TCGA-B0-4710 TCGA-B0-4712 
       39.12        42.97        28.31        22.45         0.16        43.96 
TCGA-B0-4811 TCGA-B0-4852 TCGA-B0-5081 TCGA-B0-5121 TCGA-B0-5399 TCGA-B0-5402 
       39.32        35.47         7.66         6.12         6.25         0.33 
TCGA-B0-5699 TCGA-B2-4101 TCGA-B8-4620 TCGA-BP-4161 TCGA-BP-4963 TCGA-BP-5006 
       79.73         2.96         7.43        90.28        60.30        27.62 
TCGA-BP-5169 TCGA-BP-5178 TCGA-BP-5198 TCGA-CJ-5671 TCGA-CJ-5676 TCGA-CJ-5678 
        6.31        62.86        19.82        63.85        84.66        18.84 
TCGA-CJ-5682 TCGA-CJ-5684 TCGA-CW-5580 TCGA-CW-5591 TCGA-CZ-5456 TCGA-CZ-5459 
       61.91        73.32        64.57        74.63        51.22        49.81 
TCGA-CZ-5461 TCGA-CZ-5463 TCGA-CZ-5464 
       10.85        21.76        49.05 

$`SETD2 WILD-TYPE`
TCGA-A3-3308 TCGA-A3-3316 TCGA-A3-3317 TCGA-A3-3319 TCGA-A3-3320 TCGA-A3-3322 
        0.53        49.08        49.02        37.15        49.58        48.56 
TCGA-A3-3323 TCGA-A3-3324 TCGA-A3-3326 TCGA-A3-3346 TCGA-A3-3347 TCGA-A3-3349 
       36.33        38.99        37.38         4.50        36.07        45.53 
TCGA-A3-3351 TCGA-A3-3357 TCGA-A3-3362 TCGA-A3-3363 TCGA-A3-3365 TCGA-A3-3367 
       29.92        46.85        51.25        10.49        28.67        34.65 
TCGA-A3-3370 TCGA-A3-3372 TCGA-A3-3373 TCGA-A3-3376 TCGA-A3-3378 TCGA-A3-3380 
       25.51        24.16        10.98        35.18        20.71        18.64 
TCGA-A3-3382 TCGA-A3-3385 TCGA-A3-3387 TCGA-AK-3429 TCGA-AK-3430 TCGA-AK-3436 
       18.87        23.87        20.25        66.31        15.78        67.17 
TCGA-AK-3444 TCGA-AK-3451 TCGA-AK-3456 TCGA-AK-3458 TCGA-B0-4700 TCGA-B0-4706 
       48.36        48.69         1.51        38.40        65.06         0.85 
TCGA-B0-4810 TCGA-B0-4815 TCGA-B0-4816 TCGA-B0-4818 TCGA-B0-4823 TCGA-B0-4827 
        8.75        49.02        35.54        14.01        14.93        29.06 
TCGA-B0-4842 TCGA-B0-4945 TCGA-B0-5075 TCGA-B0-5077 TCGA-B0-5080 TCGA-B0-5085 
       53.79        70.52        19.99        42.44         7.30        25.28 
TCGA-B0-5088 TCGA-B0-5092 TCGA-B0-5094 TCGA-B0-5095 TCGA-B0-5096 TCGA-B0-5097 
       14.24        15.09        10.95         8.05         2.20         4.96 
TCGA-B0-5099 TCGA-B0-5100 TCGA-B0-5102 TCGA-B0-5104 TCGA-B0-5106 TCGA-B0-5107 
       15.95        62.89        90.84        90.44        52.50        30.48 
TCGA-B0-5108 TCGA-B0-5109 TCGA-B0-5110 TCGA-B0-5113 TCGA-B0-5115 TCGA-B0-5116 
        5.33        19.27        18.41         0.72         2.96         3.39 
TCGA-B0-5119 TCGA-B0-5120 TCGA-B0-5400 TCGA-B0-5691 TCGA-B0-5692 TCGA-B0-5693 
        1.58         1.81        22.26        91.43        48.89        60.89 
TCGA-B0-5694 TCGA-B0-5695 TCGA-B0-5696 TCGA-B0-5697 TCGA-B0-5698 TCGA-B0-5701 
       15.42        34.26        31.04        37.32        71.70        41.95 
TCGA-B0-5702 TCGA-B0-5703 TCGA-B0-5705 TCGA-B0-5706 TCGA-B0-5707 TCGA-B0-5709 
       38.07         8.61       109.64        79.36        85.22        77.49 
TCGA-B0-5710 TCGA-B0-5711 TCGA-B0-5713 TCGA-B0-5812 TCGA-B2-3924 TCGA-B2-4098 
       31.46        83.93        61.28        76.41         6.38         1.64 
TCGA-B2-4099 TCGA-B2-4102 TCGA-B2-5633 TCGA-B2-5635 TCGA-B2-5641 TCGA-B4-5377 
        3.62         0.49         7.04        10.36         5.52         9.57 
TCGA-B8-4143 TCGA-B8-4146 TCGA-B8-4148 TCGA-B8-4151 TCGA-B8-4153 TCGA-B8-4154 
       23.31        16.80        12.46         9.17        13.28         8.38 
TCGA-B8-4621 TCGA-B8-4622 TCGA-B8-5158 TCGA-B8-5159 TCGA-B8-5163 TCGA-B8-5164 
        7.07         5.95         2.96         4.37         0.13         0.76 
TCGA-B8-5165 TCGA-B8-5545 TCGA-B8-5546 TCGA-B8-5549 TCGA-B8-5551 TCGA-B8-5552 
        0.26         8.15         0.46         6.38         0.49         7.20 
TCGA-BP-4162 TCGA-BP-4163 TCGA-BP-4164 TCGA-BP-4167 TCGA-BP-4770 TCGA-BP-4782 
      101.06        93.34        32.61        89.36        10.82        11.64 
TCGA-BP-4801 TCGA-BP-4960 TCGA-BP-4961 TCGA-BP-4962 TCGA-BP-4964 TCGA-BP-4967 
       36.95        71.41        63.62        58.68        61.22         6.71 
TCGA-BP-4968 TCGA-BP-4970 TCGA-BP-4971 TCGA-BP-4972 TCGA-BP-4973 TCGA-BP-4974 
       57.37        14.20        48.89        49.35        45.50         7.23 
TCGA-BP-4975 TCGA-BP-4976 TCGA-BP-4977 TCGA-BP-4981 TCGA-BP-4982 TCGA-BP-4983 
       47.11        53.65        14.93        36.07        33.30        46.42 
TCGA-BP-4985 TCGA-BP-4986 TCGA-BP-4987 TCGA-BP-4988 TCGA-BP-4989 TCGA-BP-4991 
       31.27        25.81        36.95        27.19         3.85        34.32 
TCGA-BP-4992 TCGA-BP-4993 TCGA-BP-4995 TCGA-BP-4998 TCGA-BP-4999 TCGA-BP-5000 
       16.44         5.79        45.07        30.61        41.62        18.51 
TCGA-BP-5001 TCGA-BP-5004 TCGA-BP-5007 TCGA-BP-5008 TCGA-BP-5009 TCGA-BP-5010 
       38.70        37.02        37.48        35.21        35.90        28.83 
TCGA-BP-5168 TCGA-BP-5170 TCGA-BP-5173 TCGA-BP-5174 TCGA-BP-5175 TCGA-BP-5176 
       48.10        79.27         1.78        74.20        30.64        52.27 
TCGA-BP-5177 TCGA-BP-5180 TCGA-BP-5182 TCGA-BP-5183 TCGA-BP-5184 TCGA-BP-5185 
        9.63        62.20        38.30        36.23        37.25        37.22 
TCGA-BP-5186 TCGA-BP-5187 TCGA-BP-5189 TCGA-BP-5190 TCGA-BP-5191 TCGA-BP-5192 
       22.78        13.35        27.02        33.21        31.76        23.47 
TCGA-BP-5194 TCGA-BP-5195 TCGA-BP-5196 TCGA-BP-5199 TCGA-BP-5200 TCGA-BP-5201 
       13.41        24.59        33.47        44.52        28.96        31.27 
TCGA-BP-5202 TCGA-CJ-4634 TCGA-CJ-4636 TCGA-CJ-4637 TCGA-CJ-4638 TCGA-CJ-4639 
        0.95        59.84        63.25        73.22        14.17        75.88 
TCGA-CJ-4640 TCGA-CJ-4641 TCGA-CJ-4643 TCGA-CJ-4644 TCGA-CJ-4882 TCGA-CJ-4897 
       65.69        54.61        58.92        11.05        61.91        59.44 
TCGA-CJ-4899 TCGA-CJ-4901 TCGA-CJ-4902 TCGA-CJ-4903 TCGA-CJ-4904 TCGA-CJ-4905 
       50.20        47.67        49.94        51.25        58.92        49.15 
TCGA-CJ-4907 TCGA-CJ-4908 TCGA-CJ-4912 TCGA-CJ-4913 TCGA-CJ-4916 TCGA-CJ-4918 
       49.25        50.30        54.44        38.56        45.11         3.02 
TCGA-CJ-4920 TCGA-CJ-4923 TCGA-CJ-5672 TCGA-CJ-5675 TCGA-CJ-5677 TCGA-CJ-5679 
        4.57        18.81        72.00        79.86        25.71        22.29 
TCGA-CJ-5680 TCGA-CJ-5681 TCGA-CJ-5683 TCGA-CJ-5686 TCGA-CJ-6027 TCGA-CJ-6028 
       25.25        18.12        62.10        67.00        60.99        53.42 
TCGA-CJ-6030 TCGA-CJ-6031 TCGA-CJ-6032 TCGA-CJ-6033 TCGA-CW-5581 TCGA-CW-5583 
       75.55        62.63        83.77         7.36        92.02        81.83 
TCGA-CW-5584 TCGA-CW-5585 TCGA-CW-5588 TCGA-CW-5589 TCGA-CW-6087 TCGA-CW-6090 
        5.39        85.78        66.28        78.15         1.35        75.88 
TCGA-CW-6093 TCGA-CZ-4853 TCGA-CZ-4856 TCGA-CZ-4859 TCGA-CZ-4863 TCGA-CZ-4866 
       79.89        25.45         0.59        58.75        55.56        58.13 
TCGA-CZ-5451 TCGA-CZ-5452 TCGA-CZ-5453 TCGA-CZ-5454 TCGA-CZ-5457 TCGA-CZ-5458 
       54.84        51.16         0.82        23.74        50.86        51.22 
TCGA-CZ-5460 TCGA-CZ-5462 TCGA-CZ-5465 TCGA-CZ-5466 TCGA-CZ-5467 TCGA-CZ-5468 
       47.01        10.22        45.27        22.52         2.40         1.94 
TCGA-CZ-5469 TCGA-CZ-5982 TCGA-CZ-5984 TCGA-CZ-5985 TCGA-CZ-5986 TCGA-CZ-5987 
       31.07        67.13        49.02        53.56        12.26        14.30 
TCGA-CZ-5988 TCGA-CZ-5989 TCGA-EU-5904 TCGA-EU-5905 TCGA-EU-5906 TCGA-EU-5907 
       22.78        52.57        18.08         3.88         6.77         4.14 

  SETD2 MUTATED SETD2 WILD-TYPE 
           0.16            0.13 
  SETD2 MUTATED SETD2 WILD-TYPE 
          90.28          109.64 
  SETD2 MUTATED SETD2 WILD-TYPE 
         39.120          33.385 
[1] "0.2 - 90.3 (39.1)"  "0.1 - 109.6 (33.4)"
     TCGA-A3-3308      TCGA-A3-3311      TCGA-A3-3316      TCGA-A3-3317 
"SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-A3-3319      TCGA-A3-3320      TCGA-A3-3322      TCGA-A3-3323 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-A3-3324      TCGA-A3-3326      TCGA-A3-3346      TCGA-A3-3347 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-A3-3349      TCGA-A3-3351      TCGA-A3-3357      TCGA-A3-3358 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-A3-3362      TCGA-A3-3363      TCGA-A3-3365      TCGA-A3-3367 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-A3-3370      TCGA-A3-3372      TCGA-A3-3373      TCGA-A3-3376 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-A3-3378      TCGA-A3-3380      TCGA-A3-3382      TCGA-A3-3383 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-A3-3385      TCGA-A3-3387      TCGA-AK-3429      TCGA-AK-3430 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-AK-3436      TCGA-AK-3444      TCGA-AK-3451      TCGA-AK-3455 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-AK-3456      TCGA-AK-3458      TCGA-B0-4700      TCGA-B0-4706 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-4710      TCGA-B0-4712      TCGA-B0-4810      TCGA-B0-4811 
  "SETD2 MUTATED"   "SETD2 MUTATED" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-B0-4815      TCGA-B0-4816      TCGA-B0-4818      TCGA-B0-4823 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-4827      TCGA-B0-4842      TCGA-B0-4852      TCGA-B0-4945 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-B0-5075      TCGA-B0-5077      TCGA-B0-5080      TCGA-B0-5081 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-B0-5085      TCGA-B0-5088      TCGA-B0-5092      TCGA-B0-5094 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5095      TCGA-B0-5096      TCGA-B0-5097      TCGA-B0-5099 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5100      TCGA-B0-5102      TCGA-B0-5104      TCGA-B0-5106 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5107      TCGA-B0-5108      TCGA-B0-5109      TCGA-B0-5110 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5113      TCGA-B0-5115      TCGA-B0-5116      TCGA-B0-5119 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5120      TCGA-B0-5121      TCGA-B0-5399      TCGA-B0-5400 
"SETD2 WILD-TYPE"   "SETD2 MUTATED"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-B0-5402      TCGA-B0-5691      TCGA-B0-5692      TCGA-B0-5693 
  "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5694      TCGA-B0-5695      TCGA-B0-5696      TCGA-B0-5697 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5698      TCGA-B0-5699      TCGA-B0-5701      TCGA-B0-5702 
"SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5703      TCGA-B0-5705      TCGA-B0-5706      TCGA-B0-5707 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5709      TCGA-B0-5710      TCGA-B0-5711      TCGA-B0-5713 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5812      TCGA-B2-3924      TCGA-B2-4098      TCGA-B2-4099 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B2-4101      TCGA-B2-4102      TCGA-B2-5633      TCGA-B2-5635 
  "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B2-5641      TCGA-B4-5377      TCGA-B8-4143      TCGA-B8-4146 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B8-4148      TCGA-B8-4151      TCGA-B8-4153      TCGA-B8-4154 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B8-4620      TCGA-B8-4621      TCGA-B8-4622      TCGA-B8-5158 
  "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B8-5159      TCGA-B8-5163      TCGA-B8-5164      TCGA-B8-5165 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B8-5545      TCGA-B8-5546      TCGA-B8-5549      TCGA-B8-5551 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B8-5552      TCGA-BP-4161      TCGA-BP-4162      TCGA-BP-4163 
"SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4164      TCGA-BP-4167      TCGA-BP-4770      TCGA-BP-4782 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4801      TCGA-BP-4960      TCGA-BP-4961      TCGA-BP-4962 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4963      TCGA-BP-4964      TCGA-BP-4967      TCGA-BP-4968 
  "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4970      TCGA-BP-4971      TCGA-BP-4972      TCGA-BP-4973 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4974      TCGA-BP-4975      TCGA-BP-4976      TCGA-BP-4977 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4981      TCGA-BP-4982      TCGA-BP-4983      TCGA-BP-4985 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4986      TCGA-BP-4987      TCGA-BP-4988      TCGA-BP-4989 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4991      TCGA-BP-4992      TCGA-BP-4993      TCGA-BP-4995 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4998      TCGA-BP-4999      TCGA-BP-5000      TCGA-BP-5001 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-5004      TCGA-BP-5006      TCGA-BP-5007      TCGA-BP-5008 
"SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-5009      TCGA-BP-5010      TCGA-BP-5168      TCGA-BP-5169 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-BP-5170      TCGA-BP-5173      TCGA-BP-5174      TCGA-BP-5175 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-5176      TCGA-BP-5177      TCGA-BP-5178      TCGA-BP-5180 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-BP-5182      TCGA-BP-5183      TCGA-BP-5184      TCGA-BP-5185 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-5186      TCGA-BP-5187      TCGA-BP-5189      TCGA-BP-5190 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-5191      TCGA-BP-5192      TCGA-BP-5194      TCGA-BP-5195 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-5196      TCGA-BP-5198      TCGA-BP-5199      TCGA-BP-5200 
"SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-5201      TCGA-BP-5202      TCGA-CJ-4634      TCGA-CJ-4636 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-4637      TCGA-CJ-4638      TCGA-CJ-4639      TCGA-CJ-4640 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-4641      TCGA-CJ-4643      TCGA-CJ-4644      TCGA-CJ-4882 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-4897      TCGA-CJ-4899      TCGA-CJ-4901      TCGA-CJ-4902 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-4903      TCGA-CJ-4904      TCGA-CJ-4905      TCGA-CJ-4907 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-4908      TCGA-CJ-4912      TCGA-CJ-4913      TCGA-CJ-4916 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-4918      TCGA-CJ-4920      TCGA-CJ-4923      TCGA-CJ-5671 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-CJ-5672      TCGA-CJ-5675      TCGA-CJ-5676      TCGA-CJ-5677 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-CJ-5678      TCGA-CJ-5679      TCGA-CJ-5680      TCGA-CJ-5681 
  "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-5682      TCGA-CJ-5683      TCGA-CJ-5684      TCGA-CJ-5686 
  "SETD2 MUTATED" "SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-CJ-6027      TCGA-CJ-6028      TCGA-CJ-6030      TCGA-CJ-6031 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-6032      TCGA-CJ-6033      TCGA-CW-5580      TCGA-CW-5581 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-CW-5583      TCGA-CW-5584      TCGA-CW-5585      TCGA-CW-5588 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CW-5589      TCGA-CW-5591      TCGA-CW-6087      TCGA-CW-6090 
"SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CW-6093      TCGA-CZ-4853      TCGA-CZ-4856      TCGA-CZ-4859 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CZ-4863      TCGA-CZ-4866      TCGA-CZ-5451      TCGA-CZ-5452 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CZ-5453      TCGA-CZ-5454      TCGA-CZ-5456      TCGA-CZ-5457 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-CZ-5458      TCGA-CZ-5459      TCGA-CZ-5460      TCGA-CZ-5461 
"SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-CZ-5462      TCGA-CZ-5463      TCGA-CZ-5464      TCGA-CZ-5465 
"SETD2 WILD-TYPE"   "SETD2 MUTATED"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-CZ-5466      TCGA-CZ-5467      TCGA-CZ-5468      TCGA-CZ-5469 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CZ-5982      TCGA-CZ-5984      TCGA-CZ-5985      TCGA-CZ-5986 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CZ-5987      TCGA-CZ-5988      TCGA-CZ-5989      TCGA-EU-5904 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-EU-5905      TCGA-EU-5906      TCGA-EU-5907 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-A3-3308      TCGA-A3-3311      TCGA-A3-3316      TCGA-A3-3317 
"SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-A3-3319      TCGA-A3-3320      TCGA-A3-3322      TCGA-A3-3323 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-A3-3324      TCGA-A3-3326      TCGA-A3-3346      TCGA-A3-3347 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-A3-3349      TCGA-A3-3351      TCGA-A3-3357      TCGA-A3-3358 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-A3-3362      TCGA-A3-3363      TCGA-A3-3365      TCGA-A3-3367 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-A3-3370      TCGA-A3-3372      TCGA-A3-3373      TCGA-A3-3376 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-A3-3378      TCGA-A3-3380      TCGA-A3-3382      TCGA-A3-3383 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-A3-3385      TCGA-A3-3387      TCGA-AK-3429      TCGA-AK-3430 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-AK-3436      TCGA-AK-3444      TCGA-AK-3451      TCGA-AK-3455 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-AK-3456      TCGA-AK-3458      TCGA-B0-4700      TCGA-B0-4706 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-4710      TCGA-B0-4712      TCGA-B0-4810      TCGA-B0-4811 
  "SETD2 MUTATED"   "SETD2 MUTATED" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-B0-4815      TCGA-B0-4816      TCGA-B0-4818      TCGA-B0-4823 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-4827      TCGA-B0-4842      TCGA-B0-4852      TCGA-B0-4945 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-B0-5075      TCGA-B0-5077      TCGA-B0-5080      TCGA-B0-5081 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-B0-5085      TCGA-B0-5088      TCGA-B0-5092      TCGA-B0-5094 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5095      TCGA-B0-5096      TCGA-B0-5097      TCGA-B0-5099 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5100      TCGA-B0-5102      TCGA-B0-5104      TCGA-B0-5106 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5107      TCGA-B0-5108      TCGA-B0-5109      TCGA-B0-5110 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5113      TCGA-B0-5115      TCGA-B0-5116      TCGA-B0-5119 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5120      TCGA-B0-5121      TCGA-B0-5399      TCGA-B0-5400 
"SETD2 WILD-TYPE"   "SETD2 MUTATED"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-B0-5402      TCGA-B0-5691      TCGA-B0-5692      TCGA-B0-5693 
  "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5694      TCGA-B0-5695      TCGA-B0-5696      TCGA-B0-5697 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5698      TCGA-B0-5699      TCGA-B0-5701      TCGA-B0-5702 
"SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5703      TCGA-B0-5705      TCGA-B0-5706      TCGA-B0-5707 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5709      TCGA-B0-5710      TCGA-B0-5711      TCGA-B0-5713 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5812      TCGA-B2-3924      TCGA-B2-4098      TCGA-B2-4099 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B2-4101      TCGA-B2-4102      TCGA-B2-5633      TCGA-B2-5635 
  "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B2-5641      TCGA-B4-5377      TCGA-B8-4143      TCGA-B8-4146 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B8-4148      TCGA-B8-4151      TCGA-B8-4153      TCGA-B8-4154 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B8-4620      TCGA-B8-4621      TCGA-B8-4622      TCGA-B8-5158 
  "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B8-5159      TCGA-B8-5163      TCGA-B8-5164      TCGA-B8-5165 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B8-5545      TCGA-B8-5546      TCGA-B8-5549      TCGA-B8-5551 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B8-5552      TCGA-BP-4161      TCGA-BP-4162      TCGA-BP-4163 
"SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4164      TCGA-BP-4167      TCGA-BP-4770      TCGA-BP-4782 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4801      TCGA-BP-4960      TCGA-BP-4961      TCGA-BP-4962 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4963      TCGA-BP-4964      TCGA-BP-4967      TCGA-BP-4968 
  "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4970      TCGA-BP-4971      TCGA-BP-4972      TCGA-BP-4973 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4974      TCGA-BP-4975      TCGA-BP-4976      TCGA-BP-4977 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4981      TCGA-BP-4982      TCGA-BP-4983      TCGA-BP-4985 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4986      TCGA-BP-4987      TCGA-BP-4988      TCGA-BP-4989 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4991      TCGA-BP-4992      TCGA-BP-4993      TCGA-BP-4995 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4998      TCGA-BP-4999      TCGA-BP-5000      TCGA-BP-5001 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-5004      TCGA-BP-5006      TCGA-BP-5007      TCGA-BP-5008 
"SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-5009      TCGA-BP-5010      TCGA-BP-5168      TCGA-BP-5169 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-BP-5170      TCGA-BP-5173      TCGA-BP-5174      TCGA-BP-5175 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-5176      TCGA-BP-5177      TCGA-BP-5178      TCGA-BP-5180 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-BP-5182      TCGA-BP-5183      TCGA-BP-5184      TCGA-BP-5185 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-5186      TCGA-BP-5187      TCGA-BP-5189      TCGA-BP-5190 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-5191      TCGA-BP-5192      TCGA-BP-5194      TCGA-BP-5195 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-5196      TCGA-BP-5198      TCGA-BP-5199      TCGA-BP-5200 
"SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-5201      TCGA-BP-5202      TCGA-CJ-4634      TCGA-CJ-4636 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-4637      TCGA-CJ-4638      TCGA-CJ-4639      TCGA-CJ-4640 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-4641      TCGA-CJ-4643      TCGA-CJ-4644      TCGA-CJ-4882 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-4897      TCGA-CJ-4899      TCGA-CJ-4901      TCGA-CJ-4902 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-4903      TCGA-CJ-4904      TCGA-CJ-4905      TCGA-CJ-4907 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-4908      TCGA-CJ-4912      TCGA-CJ-4913      TCGA-CJ-4916 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-4918      TCGA-CJ-4920      TCGA-CJ-4923      TCGA-CJ-5671 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-CJ-5672      TCGA-CJ-5675      TCGA-CJ-5676      TCGA-CJ-5677 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-CJ-5678      TCGA-CJ-5679      TCGA-CJ-5680      TCGA-CJ-5681 
  "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-5682      TCGA-CJ-5683      TCGA-CJ-5684      TCGA-CJ-5686 
  "SETD2 MUTATED" "SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-CJ-6027      TCGA-CJ-6028      TCGA-CJ-6030      TCGA-CJ-6031 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-6032      TCGA-CJ-6033      TCGA-CW-5580      TCGA-CW-5581 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-CW-5583      TCGA-CW-5584      TCGA-CW-5585      TCGA-CW-5588 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CW-5589      TCGA-CW-5591      TCGA-CW-6087      TCGA-CW-6090 
"SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CW-6093      TCGA-CZ-4853      TCGA-CZ-4856      TCGA-CZ-4859 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CZ-4863      TCGA-CZ-4866      TCGA-CZ-5451      TCGA-CZ-5452 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CZ-5453      TCGA-CZ-5454      TCGA-CZ-5456      TCGA-CZ-5457 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-CZ-5458      TCGA-CZ-5459      TCGA-CZ-5460      TCGA-CZ-5461 
"SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-CZ-5462      TCGA-CZ-5463      TCGA-CZ-5464      TCGA-CZ-5465 
"SETD2 WILD-TYPE"   "SETD2 MUTATED"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-CZ-5466      TCGA-CZ-5467      TCGA-CZ-5468      TCGA-CZ-5469 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CZ-5982      TCGA-CZ-5984      TCGA-CZ-5985      TCGA-CZ-5986 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CZ-5987      TCGA-CZ-5988      TCGA-CZ-5989      TCGA-EU-5904 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-EU-5905      TCGA-EU-5906      TCGA-EU-5907 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-A3-3308      TCGA-A3-3311      TCGA-A3-3316      TCGA-A3-3317 
"SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-A3-3319      TCGA-A3-3320      TCGA-A3-3322      TCGA-A3-3323 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-A3-3324      TCGA-A3-3326      TCGA-A3-3346      TCGA-A3-3347 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-A3-3349      TCGA-A3-3351      TCGA-A3-3357      TCGA-A3-3358 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-A3-3362      TCGA-A3-3363      TCGA-A3-3365      TCGA-A3-3367 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-A3-3370      TCGA-A3-3372      TCGA-A3-3373      TCGA-A3-3376 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-A3-3378      TCGA-A3-3380      TCGA-A3-3382      TCGA-A3-3383 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-A3-3385      TCGA-A3-3387      TCGA-AK-3429      TCGA-AK-3430 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-AK-3436      TCGA-AK-3444      TCGA-AK-3451      TCGA-AK-3455 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-AK-3456      TCGA-AK-3458      TCGA-B0-4700      TCGA-B0-4706 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-4710      TCGA-B0-4712      TCGA-B0-4810      TCGA-B0-4811 
  "SETD2 MUTATED"   "SETD2 MUTATED" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-B0-4815      TCGA-B0-4816      TCGA-B0-4818      TCGA-B0-4823 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-4827      TCGA-B0-4842      TCGA-B0-4852      TCGA-B0-4945 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-B0-5075      TCGA-B0-5077      TCGA-B0-5080      TCGA-B0-5081 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-B0-5085      TCGA-B0-5088      TCGA-B0-5092      TCGA-B0-5094 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5095      TCGA-B0-5096      TCGA-B0-5097      TCGA-B0-5099 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5100      TCGA-B0-5102      TCGA-B0-5104      TCGA-B0-5106 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5107      TCGA-B0-5108      TCGA-B0-5109      TCGA-B0-5110 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5113      TCGA-B0-5115      TCGA-B0-5116      TCGA-B0-5119 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5120      TCGA-B0-5121      TCGA-B0-5399      TCGA-B0-5400 
"SETD2 WILD-TYPE"   "SETD2 MUTATED"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-B0-5402      TCGA-B0-5691      TCGA-B0-5692      TCGA-B0-5693 
  "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5694      TCGA-B0-5695      TCGA-B0-5696      TCGA-B0-5697 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5698      TCGA-B0-5699      TCGA-B0-5701      TCGA-B0-5702 
"SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5703      TCGA-B0-5705      TCGA-B0-5706      TCGA-B0-5707 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5709      TCGA-B0-5710      TCGA-B0-5711      TCGA-B0-5713 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B0-5812      TCGA-B2-3924      TCGA-B2-4098      TCGA-B2-4099 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B2-4101      TCGA-B2-4102      TCGA-B2-5633      TCGA-B2-5635 
  "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B2-5641      TCGA-B4-5377      TCGA-B8-4143      TCGA-B8-4146 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B8-4148      TCGA-B8-4151      TCGA-B8-4153      TCGA-B8-4154 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B8-4620      TCGA-B8-4621      TCGA-B8-4622      TCGA-B8-5158 
  "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B8-5159      TCGA-B8-5163      TCGA-B8-5164      TCGA-B8-5165 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B8-5545      TCGA-B8-5546      TCGA-B8-5549      TCGA-B8-5551 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-B8-5552      TCGA-BP-4161      TCGA-BP-4162      TCGA-BP-4163 
"SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4164      TCGA-BP-4167      TCGA-BP-4770      TCGA-BP-4782 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4801      TCGA-BP-4960      TCGA-BP-4961      TCGA-BP-4962 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4963      TCGA-BP-4964      TCGA-BP-4967      TCGA-BP-4968 
  "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4970      TCGA-BP-4971      TCGA-BP-4972      TCGA-BP-4973 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4974      TCGA-BP-4975      TCGA-BP-4976      TCGA-BP-4977 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4981      TCGA-BP-4982      TCGA-BP-4983      TCGA-BP-4985 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4986      TCGA-BP-4987      TCGA-BP-4988      TCGA-BP-4989 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4991      TCGA-BP-4992      TCGA-BP-4993      TCGA-BP-4995 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-4998      TCGA-BP-4999      TCGA-BP-5000      TCGA-BP-5001 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-5004      TCGA-BP-5006      TCGA-BP-5007      TCGA-BP-5008 
"SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-5009      TCGA-BP-5010      TCGA-BP-5168      TCGA-BP-5169 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-BP-5170      TCGA-BP-5173      TCGA-BP-5174      TCGA-BP-5175 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-5176      TCGA-BP-5177      TCGA-BP-5178      TCGA-BP-5180 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-BP-5182      TCGA-BP-5183      TCGA-BP-5184      TCGA-BP-5185 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-5186      TCGA-BP-5187      TCGA-BP-5189      TCGA-BP-5190 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-5191      TCGA-BP-5192      TCGA-BP-5194      TCGA-BP-5195 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-5196      TCGA-BP-5198      TCGA-BP-5199      TCGA-BP-5200 
"SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-BP-5201      TCGA-BP-5202      TCGA-CJ-4634      TCGA-CJ-4636 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-4637      TCGA-CJ-4638      TCGA-CJ-4639      TCGA-CJ-4640 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-4641      TCGA-CJ-4643      TCGA-CJ-4644      TCGA-CJ-4882 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-4897      TCGA-CJ-4899      TCGA-CJ-4901      TCGA-CJ-4902 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-4903      TCGA-CJ-4904      TCGA-CJ-4905      TCGA-CJ-4907 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-4908      TCGA-CJ-4912      TCGA-CJ-4913      TCGA-CJ-4916 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-4918      TCGA-CJ-4920      TCGA-CJ-4923      TCGA-CJ-5671 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-CJ-5672      TCGA-CJ-5675      TCGA-CJ-5676      TCGA-CJ-5677 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-CJ-5678      TCGA-CJ-5679      TCGA-CJ-5680      TCGA-CJ-5681 
  "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-5682      TCGA-CJ-5683      TCGA-CJ-5684      TCGA-CJ-5686 
  "SETD2 MUTATED" "SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-CJ-6027      TCGA-CJ-6028      TCGA-CJ-6030      TCGA-CJ-6031 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CJ-6032      TCGA-CJ-6033      TCGA-CW-5580      TCGA-CW-5581 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-CW-5583      TCGA-CW-5584      TCGA-CW-5585      TCGA-CW-5588 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CW-5589      TCGA-CW-5591      TCGA-CW-6087      TCGA-CW-6090 
"SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CW-6093      TCGA-CZ-4853      TCGA-CZ-4856      TCGA-CZ-4859 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CZ-4863      TCGA-CZ-4866      TCGA-CZ-5451      TCGA-CZ-5452 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CZ-5453      TCGA-CZ-5454      TCGA-CZ-5456      TCGA-CZ-5457 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-CZ-5458      TCGA-CZ-5459      TCGA-CZ-5460      TCGA-CZ-5461 
"SETD2 WILD-TYPE"   "SETD2 MUTATED" "SETD2 WILD-TYPE"   "SETD2 MUTATED" 
     TCGA-CZ-5462      TCGA-CZ-5463      TCGA-CZ-5464      TCGA-CZ-5465 
"SETD2 WILD-TYPE"   "SETD2 MUTATED"   "SETD2 MUTATED" "SETD2 WILD-TYPE" 
     TCGA-CZ-5466      TCGA-CZ-5467      TCGA-CZ-5468      TCGA-CZ-5469 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CZ-5982      TCGA-CZ-5984      TCGA-CZ-5985      TCGA-CZ-5986 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CZ-5987      TCGA-CZ-5988      TCGA-CZ-5989      TCGA-EU-5904 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-EU-5905      TCGA-EU-5906      TCGA-EU-5907 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
[1] "hr=" "1.1"
D5V2, continuous
D5V3, binary
                 cls
clus                0   1
  SETD2 MUTATED     8  26
  SETD2 WILD-TYPE  94 165
[1] "tbl2"
                 cls
clus              [,1] [,2]
  SETD2 MUTATED      8   26
  SETD2 WILD-TYPE   94  165
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  FEMALE             8              94
  MALE              26             165
D5V4, continuous
[1] "Remove cluster labels:" "SETD2 MUTATED"         
clus
  SETD2 MUTATED SETD2 WILD-TYPE 
              1              10 
     TCGA-AK-3430      TCGA-B4-5377      TCGA-CZ-4856      TCGA-CZ-5457 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-CZ-5465      TCGA-CZ-5469      TCGA-CZ-5982      TCGA-EU-5904 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
     TCGA-EU-5905      TCGA-EU-5907 
"SETD2 WILD-TYPE" "SETD2 WILD-TYPE" 
D5V5, binary
                 cls
clus                0   1
  SETD2 MUTATED    26   8
  SETD2 WILD-TYPE 228  31
[1] "tbl2"
                 cls
clus              [,1] [,2]
  SETD2 MUTATED     26    8
  SETD2 WILD-TYPE  228   31
    clus
vv   SETD2 MUTATED SETD2 WILD-TYPE
  M0            26             228
  M1             8              31
                 vv
clus               N0  N1  NX
  SETD2 MUTATED    16   0  18
  SETD2 WILD-TYPE 119  11 129
D5V6, multiclass
    clus
vv   SETD2 MUTATED SETD2 WILD-TYPE
  N0            16             119
  N1             0              11
  NX            18             129
D5V7, continuous
                 vv
clus              STAGE I STAGE II STAGE III STAGE IV
  SETD2 MUTATED        11        5         9        9
  SETD2 WILD-TYPE     133       27        68       31
D5V8, multiclass
           clus
vv          SETD2 MUTATED SETD2 WILD-TYPE
  STAGE I              11             133
  STAGE II              5              27
  STAGE III             9              68
  STAGE IV              9              31

Clustering(6) Variable = KDM5C MUTATION ANALYSIS
D6V1, survival
                 sevent
clus2               0   1
  KDM5C MUTATED    11   7
  KDM5C WILD-TYPE 203  70
  KDM5C MUTATED KDM5C WILD-TYPE 
             18             273 
  KDM5C MUTATED KDM5C WILD-TYPE 
              7              70 
$`KDM5C MUTATED`
TCGA-A3-3319 TCGA-A3-3323 TCGA-AK-3430 TCGA-AK-3458 TCGA-B0-4816 TCGA-B0-5077 
       37.15        36.33        15.78        38.40        35.54        42.44 
TCGA-B0-5094 TCGA-B0-5106 TCGA-B0-5108 TCGA-B0-5698 TCGA-BP-5000 TCGA-BP-5169 
       10.95        52.50         5.33        71.70        18.51         6.31 
TCGA-BP-5189 TCGA-BP-5190 TCGA-BP-5195 TCGA-BP-5202 TCGA-CZ-5464 TCGA-CZ-5467 
       27.02        33.21        24.59         0.95        49.05         2.40 

$`KDM5C WILD-TYPE`
TCGA-A3-3308 TCGA-A3-3311 TCGA-A3-3316 TCGA-A3-3317 TCGA-A3-3320 TCGA-A3-3322 
        0.53        39.12        49.08        49.02        49.58        48.56 
TCGA-A3-3324 TCGA-A3-3326 TCGA-A3-3346 TCGA-A3-3347 TCGA-A3-3349 TCGA-A3-3351 
       38.99        37.38         4.50        36.07        45.53        29.92 
TCGA-A3-3357 TCGA-A3-3358 TCGA-A3-3362 TCGA-A3-3363 TCGA-A3-3365 TCGA-A3-3367 
       46.85        42.97        51.25        10.49        28.67        34.65 
TCGA-A3-3370 TCGA-A3-3372 TCGA-A3-3373 TCGA-A3-3376 TCGA-A3-3378 TCGA-A3-3380 
       25.51        24.16        10.98        35.18        20.71        18.64 
TCGA-A3-3382 TCGA-A3-3383 TCGA-A3-3385 TCGA-A3-3387 TCGA-AK-3429 TCGA-AK-3436 
       18.87        28.31        23.87        20.25        66.31        67.17 
TCGA-AK-3444 TCGA-AK-3451 TCGA-AK-3455 TCGA-AK-3456 TCGA-B0-4700 TCGA-B0-4706 
       48.36        48.69        22.45         1.51        65.06         0.85 
TCGA-B0-4710 TCGA-B0-4712 TCGA-B0-4810 TCGA-B0-4811 TCGA-B0-4815 TCGA-B0-4818 
        0.16        43.96         8.75        39.32        49.02        14.01 
TCGA-B0-4823 TCGA-B0-4827 TCGA-B0-4842 TCGA-B0-4852 TCGA-B0-4945 TCGA-B0-5075 
       14.93        29.06        53.79        35.47        70.52        19.99 
TCGA-B0-5080 TCGA-B0-5081 TCGA-B0-5085 TCGA-B0-5088 TCGA-B0-5092 TCGA-B0-5095 
        7.30         7.66        25.28        14.24        15.09         8.05 
TCGA-B0-5096 TCGA-B0-5097 TCGA-B0-5099 TCGA-B0-5100 TCGA-B0-5102 TCGA-B0-5104 
        2.20         4.96        15.95        62.89        90.84        90.44 
TCGA-B0-5107 TCGA-B0-5109 TCGA-B0-5110 TCGA-B0-5113 TCGA-B0-5115 TCGA-B0-5116 
       30.48        19.27        18.41         0.72         2.96         3.39 
TCGA-B0-5119 TCGA-B0-5120 TCGA-B0-5121 TCGA-B0-5399 TCGA-B0-5400 TCGA-B0-5402 
        1.58         1.81         6.12         6.25        22.26         0.33 
TCGA-B0-5691 TCGA-B0-5692 TCGA-B0-5693 TCGA-B0-5694 TCGA-B0-5695 TCGA-B0-5696 
       91.43        48.89        60.89        15.42        34.26        31.04 
TCGA-B0-5697 TCGA-B0-5699 TCGA-B0-5701 TCGA-B0-5702 TCGA-B0-5703 TCGA-B0-5705 
       37.32        79.73        41.95        38.07         8.61       109.64 
TCGA-B0-5706 TCGA-B0-5707 TCGA-B0-5709 TCGA-B0-5710 TCGA-B0-5711 TCGA-B0-5713 
       79.36        85.22        77.49        31.46        83.93        61.28 
TCGA-B0-5812 TCGA-B2-3924 TCGA-B2-4098 TCGA-B2-4099 TCGA-B2-4101 TCGA-B2-4102 
       76.41         6.38         1.64         3.62         2.96         0.49 
TCGA-B2-5633 TCGA-B2-5635 TCGA-B2-5641 TCGA-B4-5377 TCGA-B8-4143 TCGA-B8-4146 
        7.04        10.36         5.52         9.57        23.31        16.80 
TCGA-B8-4148 TCGA-B8-4151 TCGA-B8-4153 TCGA-B8-4154 TCGA-B8-4620 TCGA-B8-4621 
       12.46         9.17        13.28         8.38         7.43         7.07 
TCGA-B8-4622 TCGA-B8-5158 TCGA-B8-5159 TCGA-B8-5163 TCGA-B8-5164 TCGA-B8-5165 
        5.95         2.96         4.37         0.13         0.76         0.26 
TCGA-B8-5545 TCGA-B8-5546 TCGA-B8-5549 TCGA-B8-5551 TCGA-B8-5552 TCGA-BP-4161 
        8.15         0.46         6.38         0.49         7.20        90.28 
TCGA-BP-4162 TCGA-BP-4163 TCGA-BP-4164 TCGA-BP-4167 TCGA-BP-4770 TCGA-BP-4782 
      101.06        93.34        32.61        89.36        10.82        11.64 
TCGA-BP-4801 TCGA-BP-4960 TCGA-BP-4961 TCGA-BP-4962 TCGA-BP-4963 TCGA-BP-4964 
       36.95        71.41        63.62        58.68        60.30        61.22 
TCGA-BP-4967 TCGA-BP-4968 TCGA-BP-4970 TCGA-BP-4971 TCGA-BP-4972 TCGA-BP-4973 
        6.71        57.37        14.20        48.89        49.35        45.50 
TCGA-BP-4974 TCGA-BP-4975 TCGA-BP-4976 TCGA-BP-4977 TCGA-BP-4981 TCGA-BP-4982 
        7.23        47.11        53.65        14.93        36.07        33.30 
TCGA-BP-4983 TCGA-BP-4985 TCGA-BP-4986 TCGA-BP-4987 TCGA-BP-4988 TCGA-BP-4989 
       46.42        31.27        25.81        36.95        27.19         3.85 
TCGA-BP-4991 TCGA-BP-4992 TCGA-BP-4993 TCGA-BP-4995 TCGA-BP-4998 TCGA-BP-4999 
       34.32        16.44         5.79        45.07        30.61        41.62 
TCGA-BP-5001 TCGA-BP-5004 TCGA-BP-5006 TCGA-BP-5007 TCGA-BP-5008 TCGA-BP-5009 
       38.70        37.02        27.62        37.48        35.21        35.90 
TCGA-BP-5010 TCGA-BP-5168 TCGA-BP-5170 TCGA-BP-5173 TCGA-BP-5174 TCGA-BP-5175 
       28.83        48.10        79.27         1.78        74.20        30.64 
TCGA-BP-5176 TCGA-BP-5177 TCGA-BP-5178 TCGA-BP-5180 TCGA-BP-5182 TCGA-BP-5183 
       52.27         9.63        62.86        62.20        38.30        36.23 
TCGA-BP-5184 TCGA-BP-5185 TCGA-BP-5186 TCGA-BP-5187 TCGA-BP-5191 TCGA-BP-5192 
       37.25        37.22        22.78        13.35        31.76        23.47 
TCGA-BP-5194 TCGA-BP-5196 TCGA-BP-5198 TCGA-BP-5199 TCGA-BP-5200 TCGA-BP-5201 
       13.41        33.47        19.82        44.52        28.96        31.27 
TCGA-CJ-4634 TCGA-CJ-4636 TCGA-CJ-4637 TCGA-CJ-4638 TCGA-CJ-4639 TCGA-CJ-4640 
       59.84        63.25        73.22        14.17        75.88        65.69 
TCGA-CJ-4641 TCGA-CJ-4643 TCGA-CJ-4644 TCGA-CJ-4882 TCGA-CJ-4897 TCGA-CJ-4899 
       54.61        58.92        11.05        61.91        59.44        50.20 
TCGA-CJ-4901 TCGA-CJ-4902 TCGA-CJ-4903 TCGA-CJ-4904 TCGA-CJ-4905 TCGA-CJ-4907 
       47.67        49.94        51.25        58.92        49.15        49.25 
TCGA-CJ-4908 TCGA-CJ-4912 TCGA-CJ-4913 TCGA-CJ-4916 TCGA-CJ-4918 TCGA-CJ-4920 
       50.30        54.44        38.56        45.11         3.02         4.57 
TCGA-CJ-4923 TCGA-CJ-5671 TCGA-CJ-5672 TCGA-CJ-5675 TCGA-CJ-5676 TCGA-CJ-5677 
       18.81        63.85        72.00        79.86        84.66        25.71 
TCGA-CJ-5678 TCGA-CJ-5679 TCGA-CJ-5680 TCGA-CJ-5681 TCGA-CJ-5682 TCGA-CJ-5683 
       18.84        22.29        25.25        18.12        61.91        62.10 
TCGA-CJ-5684 TCGA-CJ-5686 TCGA-CJ-6027 TCGA-CJ-6028 TCGA-CJ-6030 TCGA-CJ-6031 
       73.32        67.00        60.99        53.42        75.55        62.63 
TCGA-CJ-6032 TCGA-CJ-6033 TCGA-CW-5580 TCGA-CW-5581 TCGA-CW-5583 TCGA-CW-5584 
       83.77         7.36        64.57        92.02        81.83         5.39 
TCGA-CW-5585 TCGA-CW-5588 TCGA-CW-5589 TCGA-CW-5591 TCGA-CW-6087 TCGA-CW-6090 
       85.78        66.28        78.15        74.63         1.35        75.88 
TCGA-CW-6093 TCGA-CZ-4853 TCGA-CZ-4856 TCGA-CZ-4859 TCGA-CZ-4863 TCGA-CZ-4866 
       79.89        25.45         0.59        58.75        55.56        58.13 
TCGA-CZ-5451 TCGA-CZ-5452 TCGA-CZ-5453 TCGA-CZ-5454 TCGA-CZ-5456 TCGA-CZ-5457 
       54.84        51.16         0.82        23.74        51.22        50.86 
TCGA-CZ-5458 TCGA-CZ-5459 TCGA-CZ-5460 TCGA-CZ-5461 TCGA-CZ-5462 TCGA-CZ-5463 
       51.22        49.81        47.01        10.85        10.22        21.76 
TCGA-CZ-5465 TCGA-CZ-5466 TCGA-CZ-5468 TCGA-CZ-5469 TCGA-CZ-5982 TCGA-CZ-5984 
       45.27        22.52         1.94        31.07        67.13        49.02 
TCGA-CZ-5985 TCGA-CZ-5986 TCGA-CZ-5987 TCGA-CZ-5988 TCGA-CZ-5989 TCGA-EU-5904 
       53.56        12.26        14.30        22.78        52.57        18.08 
TCGA-EU-5905 TCGA-EU-5906 TCGA-EU-5907 
        3.88         6.77         4.14 

  KDM5C MUTATED KDM5C WILD-TYPE 
           0.95            0.13 
  KDM5C MUTATED KDM5C WILD-TYPE 
          71.70          109.64 
  KDM5C MUTATED KDM5C WILD-TYPE 
         30.115          34.320 
[1] "0.9 - 71.7 (30.1)"  "0.1 - 109.6 (34.3)"
     TCGA-A3-3308      TCGA-A3-3311      TCGA-A3-3316      TCGA-A3-3317 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-A3-3319      TCGA-A3-3320      TCGA-A3-3322      TCGA-A3-3323 
  "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" 
     TCGA-A3-3324      TCGA-A3-3326      TCGA-A3-3346      TCGA-A3-3347 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-A3-3349      TCGA-A3-3351      TCGA-A3-3357      TCGA-A3-3358 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-A3-3362      TCGA-A3-3363      TCGA-A3-3365      TCGA-A3-3367 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-A3-3370      TCGA-A3-3372      TCGA-A3-3373      TCGA-A3-3376 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-A3-3378      TCGA-A3-3380      TCGA-A3-3382      TCGA-A3-3383 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-A3-3385      TCGA-A3-3387      TCGA-AK-3429      TCGA-AK-3430 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" 
     TCGA-AK-3436      TCGA-AK-3444      TCGA-AK-3451      TCGA-AK-3455 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-AK-3456      TCGA-AK-3458      TCGA-B0-4700      TCGA-B0-4706 
"KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-4710      TCGA-B0-4712      TCGA-B0-4810      TCGA-B0-4811 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-4815      TCGA-B0-4816      TCGA-B0-4818      TCGA-B0-4823 
"KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-4827      TCGA-B0-4842      TCGA-B0-4852      TCGA-B0-4945 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5075      TCGA-B0-5077      TCGA-B0-5080      TCGA-B0-5081 
"KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5085      TCGA-B0-5088      TCGA-B0-5092      TCGA-B0-5094 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" 
     TCGA-B0-5095      TCGA-B0-5096      TCGA-B0-5097      TCGA-B0-5099 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5100      TCGA-B0-5102      TCGA-B0-5104      TCGA-B0-5106 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" 
     TCGA-B0-5107      TCGA-B0-5108      TCGA-B0-5109      TCGA-B0-5110 
"KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5113      TCGA-B0-5115      TCGA-B0-5116      TCGA-B0-5119 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5120      TCGA-B0-5121      TCGA-B0-5399      TCGA-B0-5400 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5402      TCGA-B0-5691      TCGA-B0-5692      TCGA-B0-5693 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5694      TCGA-B0-5695      TCGA-B0-5696      TCGA-B0-5697 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5698      TCGA-B0-5699      TCGA-B0-5701      TCGA-B0-5702 
  "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5703      TCGA-B0-5705      TCGA-B0-5706      TCGA-B0-5707 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5709      TCGA-B0-5710      TCGA-B0-5711      TCGA-B0-5713 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5812      TCGA-B2-3924      TCGA-B2-4098      TCGA-B2-4099 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B2-4101      TCGA-B2-4102      TCGA-B2-5633      TCGA-B2-5635 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B2-5641      TCGA-B4-5377      TCGA-B8-4143      TCGA-B8-4146 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B8-4148      TCGA-B8-4151      TCGA-B8-4153      TCGA-B8-4154 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B8-4620      TCGA-B8-4621      TCGA-B8-4622      TCGA-B8-5158 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B8-5159      TCGA-B8-5163      TCGA-B8-5164      TCGA-B8-5165 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B8-5545      TCGA-B8-5546      TCGA-B8-5549      TCGA-B8-5551 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B8-5552      TCGA-BP-4161      TCGA-BP-4162      TCGA-BP-4163 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4164      TCGA-BP-4167      TCGA-BP-4770      TCGA-BP-4782 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4801      TCGA-BP-4960      TCGA-BP-4961      TCGA-BP-4962 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4963      TCGA-BP-4964      TCGA-BP-4967      TCGA-BP-4968 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4970      TCGA-BP-4971      TCGA-BP-4972      TCGA-BP-4973 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4974      TCGA-BP-4975      TCGA-BP-4976      TCGA-BP-4977 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4981      TCGA-BP-4982      TCGA-BP-4983      TCGA-BP-4985 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4986      TCGA-BP-4987      TCGA-BP-4988      TCGA-BP-4989 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4991      TCGA-BP-4992      TCGA-BP-4993      TCGA-BP-4995 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4998      TCGA-BP-4999      TCGA-BP-5000      TCGA-BP-5001 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" 
     TCGA-BP-5004      TCGA-BP-5006      TCGA-BP-5007      TCGA-BP-5008 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-5009      TCGA-BP-5010      TCGA-BP-5168      TCGA-BP-5169 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" 
     TCGA-BP-5170      TCGA-BP-5173      TCGA-BP-5174      TCGA-BP-5175 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-5176      TCGA-BP-5177      TCGA-BP-5178      TCGA-BP-5180 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-5182      TCGA-BP-5183      TCGA-BP-5184      TCGA-BP-5185 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-5186      TCGA-BP-5187      TCGA-BP-5189      TCGA-BP-5190 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED"   "KDM5C MUTATED" 
     TCGA-BP-5191      TCGA-BP-5192      TCGA-BP-5194      TCGA-BP-5195 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" 
     TCGA-BP-5196      TCGA-BP-5198      TCGA-BP-5199      TCGA-BP-5200 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-5201      TCGA-BP-5202      TCGA-CJ-4634      TCGA-CJ-4636 
"KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-4637      TCGA-CJ-4638      TCGA-CJ-4639      TCGA-CJ-4640 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-4641      TCGA-CJ-4643      TCGA-CJ-4644      TCGA-CJ-4882 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-4897      TCGA-CJ-4899      TCGA-CJ-4901      TCGA-CJ-4902 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-4903      TCGA-CJ-4904      TCGA-CJ-4905      TCGA-CJ-4907 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-4908      TCGA-CJ-4912      TCGA-CJ-4913      TCGA-CJ-4916 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-4918      TCGA-CJ-4920      TCGA-CJ-4923      TCGA-CJ-5671 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-5672      TCGA-CJ-5675      TCGA-CJ-5676      TCGA-CJ-5677 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-5678      TCGA-CJ-5679      TCGA-CJ-5680      TCGA-CJ-5681 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-5682      TCGA-CJ-5683      TCGA-CJ-5684      TCGA-CJ-5686 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-6027      TCGA-CJ-6028      TCGA-CJ-6030      TCGA-CJ-6031 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-6032      TCGA-CJ-6033      TCGA-CW-5580      TCGA-CW-5581 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CW-5583      TCGA-CW-5584      TCGA-CW-5585      TCGA-CW-5588 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CW-5589      TCGA-CW-5591      TCGA-CW-6087      TCGA-CW-6090 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CW-6093      TCGA-CZ-4853      TCGA-CZ-4856      TCGA-CZ-4859 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CZ-4863      TCGA-CZ-4866      TCGA-CZ-5451      TCGA-CZ-5452 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CZ-5453      TCGA-CZ-5454      TCGA-CZ-5456      TCGA-CZ-5457 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CZ-5458      TCGA-CZ-5459      TCGA-CZ-5460      TCGA-CZ-5461 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CZ-5462      TCGA-CZ-5463      TCGA-CZ-5464      TCGA-CZ-5465 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" 
     TCGA-CZ-5466      TCGA-CZ-5467      TCGA-CZ-5468      TCGA-CZ-5469 
"KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CZ-5982      TCGA-CZ-5984      TCGA-CZ-5985      TCGA-CZ-5986 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CZ-5987      TCGA-CZ-5988      TCGA-CZ-5989      TCGA-EU-5904 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-EU-5905      TCGA-EU-5906      TCGA-EU-5907 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-A3-3308      TCGA-A3-3311      TCGA-A3-3316      TCGA-A3-3317 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-A3-3319      TCGA-A3-3320      TCGA-A3-3322      TCGA-A3-3323 
  "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" 
     TCGA-A3-3324      TCGA-A3-3326      TCGA-A3-3346      TCGA-A3-3347 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-A3-3349      TCGA-A3-3351      TCGA-A3-3357      TCGA-A3-3358 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-A3-3362      TCGA-A3-3363      TCGA-A3-3365      TCGA-A3-3367 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-A3-3370      TCGA-A3-3372      TCGA-A3-3373      TCGA-A3-3376 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-A3-3378      TCGA-A3-3380      TCGA-A3-3382      TCGA-A3-3383 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-A3-3385      TCGA-A3-3387      TCGA-AK-3429      TCGA-AK-3430 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" 
     TCGA-AK-3436      TCGA-AK-3444      TCGA-AK-3451      TCGA-AK-3455 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-AK-3456      TCGA-AK-3458      TCGA-B0-4700      TCGA-B0-4706 
"KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-4710      TCGA-B0-4712      TCGA-B0-4810      TCGA-B0-4811 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-4815      TCGA-B0-4816      TCGA-B0-4818      TCGA-B0-4823 
"KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-4827      TCGA-B0-4842      TCGA-B0-4852      TCGA-B0-4945 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5075      TCGA-B0-5077      TCGA-B0-5080      TCGA-B0-5081 
"KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5085      TCGA-B0-5088      TCGA-B0-5092      TCGA-B0-5094 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" 
     TCGA-B0-5095      TCGA-B0-5096      TCGA-B0-5097      TCGA-B0-5099 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5100      TCGA-B0-5102      TCGA-B0-5104      TCGA-B0-5106 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" 
     TCGA-B0-5107      TCGA-B0-5108      TCGA-B0-5109      TCGA-B0-5110 
"KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5113      TCGA-B0-5115      TCGA-B0-5116      TCGA-B0-5119 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5120      TCGA-B0-5121      TCGA-B0-5399      TCGA-B0-5400 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5402      TCGA-B0-5691      TCGA-B0-5692      TCGA-B0-5693 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5694      TCGA-B0-5695      TCGA-B0-5696      TCGA-B0-5697 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5698      TCGA-B0-5699      TCGA-B0-5701      TCGA-B0-5702 
  "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5703      TCGA-B0-5705      TCGA-B0-5706      TCGA-B0-5707 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5709      TCGA-B0-5710      TCGA-B0-5711      TCGA-B0-5713 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5812      TCGA-B2-3924      TCGA-B2-4098      TCGA-B2-4099 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B2-4101      TCGA-B2-4102      TCGA-B2-5633      TCGA-B2-5635 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B2-5641      TCGA-B4-5377      TCGA-B8-4143      TCGA-B8-4146 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B8-4148      TCGA-B8-4151      TCGA-B8-4153      TCGA-B8-4154 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B8-4620      TCGA-B8-4621      TCGA-B8-4622      TCGA-B8-5158 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B8-5159      TCGA-B8-5163      TCGA-B8-5164      TCGA-B8-5165 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B8-5545      TCGA-B8-5546      TCGA-B8-5549      TCGA-B8-5551 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B8-5552      TCGA-BP-4161      TCGA-BP-4162      TCGA-BP-4163 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4164      TCGA-BP-4167      TCGA-BP-4770      TCGA-BP-4782 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4801      TCGA-BP-4960      TCGA-BP-4961      TCGA-BP-4962 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4963      TCGA-BP-4964      TCGA-BP-4967      TCGA-BP-4968 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4970      TCGA-BP-4971      TCGA-BP-4972      TCGA-BP-4973 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4974      TCGA-BP-4975      TCGA-BP-4976      TCGA-BP-4977 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4981      TCGA-BP-4982      TCGA-BP-4983      TCGA-BP-4985 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4986      TCGA-BP-4987      TCGA-BP-4988      TCGA-BP-4989 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4991      TCGA-BP-4992      TCGA-BP-4993      TCGA-BP-4995 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4998      TCGA-BP-4999      TCGA-BP-5000      TCGA-BP-5001 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" 
     TCGA-BP-5004      TCGA-BP-5006      TCGA-BP-5007      TCGA-BP-5008 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-5009      TCGA-BP-5010      TCGA-BP-5168      TCGA-BP-5169 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" 
     TCGA-BP-5170      TCGA-BP-5173      TCGA-BP-5174      TCGA-BP-5175 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-5176      TCGA-BP-5177      TCGA-BP-5178      TCGA-BP-5180 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-5182      TCGA-BP-5183      TCGA-BP-5184      TCGA-BP-5185 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-5186      TCGA-BP-5187      TCGA-BP-5189      TCGA-BP-5190 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED"   "KDM5C MUTATED" 
     TCGA-BP-5191      TCGA-BP-5192      TCGA-BP-5194      TCGA-BP-5195 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" 
     TCGA-BP-5196      TCGA-BP-5198      TCGA-BP-5199      TCGA-BP-5200 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-5201      TCGA-BP-5202      TCGA-CJ-4634      TCGA-CJ-4636 
"KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-4637      TCGA-CJ-4638      TCGA-CJ-4639      TCGA-CJ-4640 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-4641      TCGA-CJ-4643      TCGA-CJ-4644      TCGA-CJ-4882 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-4897      TCGA-CJ-4899      TCGA-CJ-4901      TCGA-CJ-4902 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-4903      TCGA-CJ-4904      TCGA-CJ-4905      TCGA-CJ-4907 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-4908      TCGA-CJ-4912      TCGA-CJ-4913      TCGA-CJ-4916 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-4918      TCGA-CJ-4920      TCGA-CJ-4923      TCGA-CJ-5671 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-5672      TCGA-CJ-5675      TCGA-CJ-5676      TCGA-CJ-5677 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-5678      TCGA-CJ-5679      TCGA-CJ-5680      TCGA-CJ-5681 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-5682      TCGA-CJ-5683      TCGA-CJ-5684      TCGA-CJ-5686 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-6027      TCGA-CJ-6028      TCGA-CJ-6030      TCGA-CJ-6031 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-6032      TCGA-CJ-6033      TCGA-CW-5580      TCGA-CW-5581 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CW-5583      TCGA-CW-5584      TCGA-CW-5585      TCGA-CW-5588 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CW-5589      TCGA-CW-5591      TCGA-CW-6087      TCGA-CW-6090 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CW-6093      TCGA-CZ-4853      TCGA-CZ-4856      TCGA-CZ-4859 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CZ-4863      TCGA-CZ-4866      TCGA-CZ-5451      TCGA-CZ-5452 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CZ-5453      TCGA-CZ-5454      TCGA-CZ-5456      TCGA-CZ-5457 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CZ-5458      TCGA-CZ-5459      TCGA-CZ-5460      TCGA-CZ-5461 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CZ-5462      TCGA-CZ-5463      TCGA-CZ-5464      TCGA-CZ-5465 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" 
     TCGA-CZ-5466      TCGA-CZ-5467      TCGA-CZ-5468      TCGA-CZ-5469 
"KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CZ-5982      TCGA-CZ-5984      TCGA-CZ-5985      TCGA-CZ-5986 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CZ-5987      TCGA-CZ-5988      TCGA-CZ-5989      TCGA-EU-5904 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-EU-5905      TCGA-EU-5906      TCGA-EU-5907 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-A3-3308      TCGA-A3-3311      TCGA-A3-3316      TCGA-A3-3317 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-A3-3319      TCGA-A3-3320      TCGA-A3-3322      TCGA-A3-3323 
  "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" 
     TCGA-A3-3324      TCGA-A3-3326      TCGA-A3-3346      TCGA-A3-3347 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-A3-3349      TCGA-A3-3351      TCGA-A3-3357      TCGA-A3-3358 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-A3-3362      TCGA-A3-3363      TCGA-A3-3365      TCGA-A3-3367 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-A3-3370      TCGA-A3-3372      TCGA-A3-3373      TCGA-A3-3376 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-A3-3378      TCGA-A3-3380      TCGA-A3-3382      TCGA-A3-3383 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-A3-3385      TCGA-A3-3387      TCGA-AK-3429      TCGA-AK-3430 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" 
     TCGA-AK-3436      TCGA-AK-3444      TCGA-AK-3451      TCGA-AK-3455 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-AK-3456      TCGA-AK-3458      TCGA-B0-4700      TCGA-B0-4706 
"KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-4710      TCGA-B0-4712      TCGA-B0-4810      TCGA-B0-4811 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-4815      TCGA-B0-4816      TCGA-B0-4818      TCGA-B0-4823 
"KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-4827      TCGA-B0-4842      TCGA-B0-4852      TCGA-B0-4945 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5075      TCGA-B0-5077      TCGA-B0-5080      TCGA-B0-5081 
"KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5085      TCGA-B0-5088      TCGA-B0-5092      TCGA-B0-5094 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" 
     TCGA-B0-5095      TCGA-B0-5096      TCGA-B0-5097      TCGA-B0-5099 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5100      TCGA-B0-5102      TCGA-B0-5104      TCGA-B0-5106 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" 
     TCGA-B0-5107      TCGA-B0-5108      TCGA-B0-5109      TCGA-B0-5110 
"KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5113      TCGA-B0-5115      TCGA-B0-5116      TCGA-B0-5119 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5120      TCGA-B0-5121      TCGA-B0-5399      TCGA-B0-5400 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5402      TCGA-B0-5691      TCGA-B0-5692      TCGA-B0-5693 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5694      TCGA-B0-5695      TCGA-B0-5696      TCGA-B0-5697 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5698      TCGA-B0-5699      TCGA-B0-5701      TCGA-B0-5702 
  "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5703      TCGA-B0-5705      TCGA-B0-5706      TCGA-B0-5707 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5709      TCGA-B0-5710      TCGA-B0-5711      TCGA-B0-5713 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B0-5812      TCGA-B2-3924      TCGA-B2-4098      TCGA-B2-4099 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B2-4101      TCGA-B2-4102      TCGA-B2-5633      TCGA-B2-5635 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B2-5641      TCGA-B4-5377      TCGA-B8-4143      TCGA-B8-4146 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B8-4148      TCGA-B8-4151      TCGA-B8-4153      TCGA-B8-4154 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B8-4620      TCGA-B8-4621      TCGA-B8-4622      TCGA-B8-5158 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B8-5159      TCGA-B8-5163      TCGA-B8-5164      TCGA-B8-5165 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B8-5545      TCGA-B8-5546      TCGA-B8-5549      TCGA-B8-5551 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-B8-5552      TCGA-BP-4161      TCGA-BP-4162      TCGA-BP-4163 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4164      TCGA-BP-4167      TCGA-BP-4770      TCGA-BP-4782 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4801      TCGA-BP-4960      TCGA-BP-4961      TCGA-BP-4962 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4963      TCGA-BP-4964      TCGA-BP-4967      TCGA-BP-4968 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4970      TCGA-BP-4971      TCGA-BP-4972      TCGA-BP-4973 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4974      TCGA-BP-4975      TCGA-BP-4976      TCGA-BP-4977 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4981      TCGA-BP-4982      TCGA-BP-4983      TCGA-BP-4985 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4986      TCGA-BP-4987      TCGA-BP-4988      TCGA-BP-4989 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4991      TCGA-BP-4992      TCGA-BP-4993      TCGA-BP-4995 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-4998      TCGA-BP-4999      TCGA-BP-5000      TCGA-BP-5001 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" 
     TCGA-BP-5004      TCGA-BP-5006      TCGA-BP-5007      TCGA-BP-5008 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-5009      TCGA-BP-5010      TCGA-BP-5168      TCGA-BP-5169 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" 
     TCGA-BP-5170      TCGA-BP-5173      TCGA-BP-5174      TCGA-BP-5175 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-5176      TCGA-BP-5177      TCGA-BP-5178      TCGA-BP-5180 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-5182      TCGA-BP-5183      TCGA-BP-5184      TCGA-BP-5185 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-5186      TCGA-BP-5187      TCGA-BP-5189      TCGA-BP-5190 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED"   "KDM5C MUTATED" 
     TCGA-BP-5191      TCGA-BP-5192      TCGA-BP-5194      TCGA-BP-5195 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" 
     TCGA-BP-5196      TCGA-BP-5198      TCGA-BP-5199      TCGA-BP-5200 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-BP-5201      TCGA-BP-5202      TCGA-CJ-4634      TCGA-CJ-4636 
"KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-4637      TCGA-CJ-4638      TCGA-CJ-4639      TCGA-CJ-4640 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-4641      TCGA-CJ-4643      TCGA-CJ-4644      TCGA-CJ-4882 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-4897      TCGA-CJ-4899      TCGA-CJ-4901      TCGA-CJ-4902 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-4903      TCGA-CJ-4904      TCGA-CJ-4905      TCGA-CJ-4907 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-4908      TCGA-CJ-4912      TCGA-CJ-4913      TCGA-CJ-4916 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-4918      TCGA-CJ-4920      TCGA-CJ-4923      TCGA-CJ-5671 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-5672      TCGA-CJ-5675      TCGA-CJ-5676      TCGA-CJ-5677 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-5678      TCGA-CJ-5679      TCGA-CJ-5680      TCGA-CJ-5681 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-5682      TCGA-CJ-5683      TCGA-CJ-5684      TCGA-CJ-5686 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-6027      TCGA-CJ-6028      TCGA-CJ-6030      TCGA-CJ-6031 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CJ-6032      TCGA-CJ-6033      TCGA-CW-5580      TCGA-CW-5581 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CW-5583      TCGA-CW-5584      TCGA-CW-5585      TCGA-CW-5588 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CW-5589      TCGA-CW-5591      TCGA-CW-6087      TCGA-CW-6090 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CW-6093      TCGA-CZ-4853      TCGA-CZ-4856      TCGA-CZ-4859 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CZ-4863      TCGA-CZ-4866      TCGA-CZ-5451      TCGA-CZ-5452 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CZ-5453      TCGA-CZ-5454      TCGA-CZ-5456      TCGA-CZ-5457 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CZ-5458      TCGA-CZ-5459      TCGA-CZ-5460      TCGA-CZ-5461 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CZ-5462      TCGA-CZ-5463      TCGA-CZ-5464      TCGA-CZ-5465 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" 
     TCGA-CZ-5466      TCGA-CZ-5467      TCGA-CZ-5468      TCGA-CZ-5469 
"KDM5C WILD-TYPE"   "KDM5C MUTATED" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CZ-5982      TCGA-CZ-5984      TCGA-CZ-5985      TCGA-CZ-5986 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CZ-5987      TCGA-CZ-5988      TCGA-CZ-5989      TCGA-EU-5904 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-EU-5905      TCGA-EU-5906      TCGA-EU-5907 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
[1] "hr=" "2"  
D6V2, continuous
D6V3, binary
                 cls
clus                0   1
  KDM5C MUTATED     1  17
  KDM5C WILD-TYPE 101 174
[1] "tbl2"
                 cls
clus              [,1] [,2]
  KDM5C MUTATED      1   17
  KDM5C WILD-TYPE  101  174
        clus
vv       KDM5C MUTATED KDM5C WILD-TYPE
  FEMALE             1             101
  MALE              17             174
D6V4, continuous
[1] "Remove cluster labels:" "KDM5C MUTATED"         
clus
  KDM5C MUTATED KDM5C WILD-TYPE 
              1              10 
     TCGA-B4-5377      TCGA-CZ-4856      TCGA-CZ-5456      TCGA-CZ-5457 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-CZ-5465      TCGA-CZ-5469      TCGA-CZ-5982      TCGA-EU-5904 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
     TCGA-EU-5905      TCGA-EU-5907 
"KDM5C WILD-TYPE" "KDM5C WILD-TYPE" 
D6V5, binary
                 cls
clus                0   1
  KDM5C MUTATED    16   2
  KDM5C WILD-TYPE 238  37
[1] "tbl2"
                 cls
clus              [,1] [,2]
  KDM5C MUTATED     16    2
  KDM5C WILD-TYPE  238   37
    clus
vv   KDM5C MUTATED KDM5C WILD-TYPE
  M0            16             238
  M1             2              37
                 vv
clus               N0  N1  NX
  KDM5C MUTATED     8   1   9
  KDM5C WILD-TYPE 127  10 138
D6V6, multiclass
    clus
vv   KDM5C MUTATED KDM5C WILD-TYPE
  N0             8             127
  N1             1              10
  NX             9             138
D6V7, continuous
                 vv
clus              STAGE I STAGE II STAGE III STAGE IV
  KDM5C MUTATED        11        1         4        2
  KDM5C WILD-TYPE     133       31        73       38
D6V8, multiclass
           clus
vv          KDM5C MUTATED KDM5C WILD-TYPE
  STAGE I              11             133
  STAGE II              1              31
  STAGE III             4              73
  STAGE IV              2              38

Clustering(7) Variable = TP53 MUTATION ANALYSIS
D7V1, survival
                sevent
clus2              0   1
  TP53 MUTATED     3   3
  TP53 WILD-TYPE 211  74
  TP53 MUTATED TP53 WILD-TYPE 
             6            285 
  TP53 MUTATED TP53 WILD-TYPE 
             3             74 
$`TP53 MUTATED`
TCGA-A3-3308 TCGA-B0-4710 TCGA-B0-4810 TCGA-BP-4770 TCGA-CJ-5677 TCGA-CZ-5463 
        0.53         0.16         8.75        10.82        25.71        21.76 

$`TP53 WILD-TYPE`
TCGA-A3-3311 TCGA-A3-3316 TCGA-A3-3317 TCGA-A3-3319 TCGA-A3-3320 TCGA-A3-3322 
       39.12        49.08        49.02        37.15        49.58        48.56 
TCGA-A3-3323 TCGA-A3-3324 TCGA-A3-3326 TCGA-A3-3346 TCGA-A3-3347 TCGA-A3-3349 
       36.33        38.99        37.38         4.50        36.07        45.53 
TCGA-A3-3351 TCGA-A3-3357 TCGA-A3-3358 TCGA-A3-3362 TCGA-A3-3363 TCGA-A3-3365 
       29.92        46.85        42.97        51.25        10.49        28.67 
TCGA-A3-3367 TCGA-A3-3370 TCGA-A3-3372 TCGA-A3-3373 TCGA-A3-3376 TCGA-A3-3378 
       34.65        25.51        24.16        10.98        35.18        20.71 
TCGA-A3-3380 TCGA-A3-3382 TCGA-A3-3383 TCGA-A3-3385 TCGA-A3-3387 TCGA-AK-3429 
       18.64        18.87        28.31        23.87        20.25        66.31 
TCGA-AK-3430 TCGA-AK-3436 TCGA-AK-3444 TCGA-AK-3451 TCGA-AK-3455 TCGA-AK-3456 
       15.78        67.17        48.36        48.69        22.45         1.51 
TCGA-AK-3458 TCGA-B0-4700 TCGA-B0-4706 TCGA-B0-4712 TCGA-B0-4811 TCGA-B0-4815 
       38.40        65.06         0.85        43.96        39.32        49.02 
TCGA-B0-4816 TCGA-B0-4818 TCGA-B0-4823 TCGA-B0-4827 TCGA-B0-4842 TCGA-B0-4852 
       35.54        14.01        14.93        29.06        53.79        35.47 
TCGA-B0-4945 TCGA-B0-5075 TCGA-B0-5077 TCGA-B0-5080 TCGA-B0-5081 TCGA-B0-5085 
       70.52        19.99        42.44         7.30         7.66        25.28 
TCGA-B0-5088 TCGA-B0-5092 TCGA-B0-5094 TCGA-B0-5095 TCGA-B0-5096 TCGA-B0-5097 
       14.24        15.09        10.95         8.05         2.20         4.96 
TCGA-B0-5099 TCGA-B0-5100 TCGA-B0-5102 TCGA-B0-5104 TCGA-B0-5106 TCGA-B0-5107 
       15.95        62.89        90.84        90.44        52.50        30.48 
TCGA-B0-5108 TCGA-B0-5109 TCGA-B0-5110 TCGA-B0-5113 TCGA-B0-5115 TCGA-B0-5116 
        5.33        19.27        18.41         0.72         2.96         3.39 
TCGA-B0-5119 TCGA-B0-5120 TCGA-B0-5121 TCGA-B0-5399 TCGA-B0-5400 TCGA-B0-5402 
        1.58         1.81         6.12         6.25        22.26         0.33 
TCGA-B0-5691 TCGA-B0-5692 TCGA-B0-5693 TCGA-B0-5694 TCGA-B0-5695 TCGA-B0-5696 
       91.43        48.89        60.89        15.42        34.26        31.04 
TCGA-B0-5697 TCGA-B0-5698 TCGA-B0-5699 TCGA-B0-5701 TCGA-B0-5702 TCGA-B0-5703 
       37.32        71.70        79.73        41.95        38.07         8.61 
TCGA-B0-5705 TCGA-B0-5706 TCGA-B0-5707 TCGA-B0-5709 TCGA-B0-5710 TCGA-B0-5711 
      109.64        79.36        85.22        77.49        31.46        83.93 
TCGA-B0-5713 TCGA-B0-5812 TCGA-B2-3924 TCGA-B2-4098 TCGA-B2-4099 TCGA-B2-4101 
       61.28        76.41         6.38         1.64         3.62         2.96 
TCGA-B2-4102 TCGA-B2-5633 TCGA-B2-5635 TCGA-B2-5641 TCGA-B4-5377 TCGA-B8-4143 
        0.49         7.04        10.36         5.52         9.57        23.31 
TCGA-B8-4146 TCGA-B8-4148 TCGA-B8-4151 TCGA-B8-4153 TCGA-B8-4154 TCGA-B8-4620 
       16.80        12.46         9.17        13.28         8.38         7.43 
TCGA-B8-4621 TCGA-B8-4622 TCGA-B8-5158 TCGA-B8-5159 TCGA-B8-5163 TCGA-B8-5164 
        7.07         5.95         2.96         4.37         0.13         0.76 
TCGA-B8-5165 TCGA-B8-5545 TCGA-B8-5546 TCGA-B8-5549 TCGA-B8-5551 TCGA-B8-5552 
        0.26         8.15         0.46         6.38         0.49         7.20 
TCGA-BP-4161 TCGA-BP-4162 TCGA-BP-4163 TCGA-BP-4164 TCGA-BP-4167 TCGA-BP-4782 
       90.28       101.06        93.34        32.61        89.36        11.64 
TCGA-BP-4801 TCGA-BP-4960 TCGA-BP-4961 TCGA-BP-4962 TCGA-BP-4963 TCGA-BP-4964 
       36.95        71.41        63.62        58.68        60.30        61.22 
TCGA-BP-4967 TCGA-BP-4968 TCGA-BP-4970 TCGA-BP-4971 TCGA-BP-4972 TCGA-BP-4973 
        6.71        57.37        14.20        48.89        49.35        45.50 
TCGA-BP-4974 TCGA-BP-4975 TCGA-BP-4976 TCGA-BP-4977 TCGA-BP-4981 TCGA-BP-4982 
        7.23        47.11        53.65        14.93        36.07        33.30 
TCGA-BP-4983 TCGA-BP-4985 TCGA-BP-4986 TCGA-BP-4987 TCGA-BP-4988 TCGA-BP-4989 
       46.42        31.27        25.81        36.95        27.19         3.85 
TCGA-BP-4991 TCGA-BP-4992 TCGA-BP-4993 TCGA-BP-4995 TCGA-BP-4998 TCGA-BP-4999 
       34.32        16.44         5.79        45.07        30.61        41.62 
TCGA-BP-5000 TCGA-BP-5001 TCGA-BP-5004 TCGA-BP-5006 TCGA-BP-5007 TCGA-BP-5008 
       18.51        38.70        37.02        27.62        37.48        35.21 
TCGA-BP-5009 TCGA-BP-5010 TCGA-BP-5168 TCGA-BP-5169 TCGA-BP-5170 TCGA-BP-5173 
       35.90        28.83        48.10         6.31        79.27         1.78 
TCGA-BP-5174 TCGA-BP-5175 TCGA-BP-5176 TCGA-BP-5177 TCGA-BP-5178 TCGA-BP-5180 
       74.20        30.64        52.27         9.63        62.86        62.20 
TCGA-BP-5182 TCGA-BP-5183 TCGA-BP-5184 TCGA-BP-5185 TCGA-BP-5186 TCGA-BP-5187 
       38.30        36.23        37.25        37.22        22.78        13.35 
TCGA-BP-5189 TCGA-BP-5190 TCGA-BP-5191 TCGA-BP-5192 TCGA-BP-5194 TCGA-BP-5195 
       27.02        33.21        31.76        23.47        13.41        24.59 
TCGA-BP-5196 TCGA-BP-5198 TCGA-BP-5199 TCGA-BP-5200 TCGA-BP-5201 TCGA-BP-5202 
       33.47        19.82        44.52        28.96        31.27         0.95 
TCGA-CJ-4634 TCGA-CJ-4636 TCGA-CJ-4637 TCGA-CJ-4638 TCGA-CJ-4639 TCGA-CJ-4640 
       59.84        63.25        73.22        14.17        75.88        65.69 
TCGA-CJ-4641 TCGA-CJ-4643 TCGA-CJ-4644 TCGA-CJ-4882 TCGA-CJ-4897 TCGA-CJ-4899 
       54.61        58.92        11.05        61.91        59.44        50.20 
TCGA-CJ-4901 TCGA-CJ-4902 TCGA-CJ-4903 TCGA-CJ-4904 TCGA-CJ-4905 TCGA-CJ-4907 
       47.67        49.94        51.25        58.92        49.15        49.25 
TCGA-CJ-4908 TCGA-CJ-4912 TCGA-CJ-4913 TCGA-CJ-4916 TCGA-CJ-4918 TCGA-CJ-4920 
       50.30        54.44        38.56        45.11         3.02         4.57 
TCGA-CJ-4923 TCGA-CJ-5671 TCGA-CJ-5672 TCGA-CJ-5675 TCGA-CJ-5676 TCGA-CJ-5678 
       18.81        63.85        72.00        79.86        84.66        18.84 
TCGA-CJ-5679 TCGA-CJ-5680 TCGA-CJ-5681 TCGA-CJ-5682 TCGA-CJ-5683 TCGA-CJ-5684 
       22.29        25.25        18.12        61.91        62.10        73.32 
TCGA-CJ-5686 TCGA-CJ-6027 TCGA-CJ-6028 TCGA-CJ-6030 TCGA-CJ-6031 TCGA-CJ-6032 
       67.00        60.99        53.42        75.55        62.63        83.77 
TCGA-CJ-6033 TCGA-CW-5580 TCGA-CW-5581 TCGA-CW-5583 TCGA-CW-5584 TCGA-CW-5585 
        7.36        64.57        92.02        81.83         5.39        85.78 
TCGA-CW-5588 TCGA-CW-5589 TCGA-CW-5591 TCGA-CW-6087 TCGA-CW-6090 TCGA-CW-6093 
       66.28        78.15        74.63         1.35        75.88        79.89 
TCGA-CZ-4853 TCGA-CZ-4856 TCGA-CZ-4859 TCGA-CZ-4863 TCGA-CZ-4866 TCGA-CZ-5451 
       25.45         0.59        58.75        55.56        58.13        54.84 
TCGA-CZ-5452 TCGA-CZ-5453 TCGA-CZ-5454 TCGA-CZ-5456 TCGA-CZ-5457 TCGA-CZ-5458 
       51.16         0.82        23.74        51.22        50.86        51.22 
TCGA-CZ-5459 TCGA-CZ-5460 TCGA-CZ-5461 TCGA-CZ-5462 TCGA-CZ-5464 TCGA-CZ-5465 
       49.81        47.01        10.85        10.22        49.05        45.27 
TCGA-CZ-5466 TCGA-CZ-5467 TCGA-CZ-5468 TCGA-CZ-5469 TCGA-CZ-5982 TCGA-CZ-5984 
       22.52         2.40         1.94        31.07        67.13        49.02 
TCGA-CZ-5985 TCGA-CZ-5986 TCGA-CZ-5987 TCGA-CZ-5988 TCGA-CZ-5989 TCGA-EU-5904 
       53.56        12.26        14.30        22.78        52.57        18.08 
TCGA-EU-5905 TCGA-EU-5906 TCGA-EU-5907 
        3.88         6.77         4.14 

  TP53 MUTATED TP53 WILD-TYPE 
          0.16           0.13 
  TP53 MUTATED TP53 WILD-TYPE 
         25.71         109.64 
  TP53 MUTATED TP53 WILD-TYPE 
         9.785         35.180 
[1] "0.2 - 25.7 (9.8)"   "0.1 - 109.6 (35.2)"
    TCGA-A3-3308     TCGA-A3-3311     TCGA-A3-3316     TCGA-A3-3317 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3319     TCGA-A3-3320     TCGA-A3-3322     TCGA-A3-3323 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3324     TCGA-A3-3326     TCGA-A3-3346     TCGA-A3-3347 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3349     TCGA-A3-3351     TCGA-A3-3357     TCGA-A3-3358 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3362     TCGA-A3-3363     TCGA-A3-3365     TCGA-A3-3367 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3370     TCGA-A3-3372     TCGA-A3-3373     TCGA-A3-3376 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3378     TCGA-A3-3380     TCGA-A3-3382     TCGA-A3-3383 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3385     TCGA-A3-3387     TCGA-AK-3429     TCGA-AK-3430 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AK-3436     TCGA-AK-3444     TCGA-AK-3451     TCGA-AK-3455 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AK-3456     TCGA-AK-3458     TCGA-B0-4700     TCGA-B0-4706 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-4710     TCGA-B0-4712     TCGA-B0-4810     TCGA-B0-4811 
  "TP53 MUTATED" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-B0-4815     TCGA-B0-4816     TCGA-B0-4818     TCGA-B0-4823 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-4827     TCGA-B0-4842     TCGA-B0-4852     TCGA-B0-4945 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5075     TCGA-B0-5077     TCGA-B0-5080     TCGA-B0-5081 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5085     TCGA-B0-5088     TCGA-B0-5092     TCGA-B0-5094 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5095     TCGA-B0-5096     TCGA-B0-5097     TCGA-B0-5099 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5100     TCGA-B0-5102     TCGA-B0-5104     TCGA-B0-5106 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5107     TCGA-B0-5108     TCGA-B0-5109     TCGA-B0-5110 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5113     TCGA-B0-5115     TCGA-B0-5116     TCGA-B0-5119 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5120     TCGA-B0-5121     TCGA-B0-5399     TCGA-B0-5400 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5402     TCGA-B0-5691     TCGA-B0-5692     TCGA-B0-5693 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5694     TCGA-B0-5695     TCGA-B0-5696     TCGA-B0-5697 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5698     TCGA-B0-5699     TCGA-B0-5701     TCGA-B0-5702 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5703     TCGA-B0-5705     TCGA-B0-5706     TCGA-B0-5707 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5709     TCGA-B0-5710     TCGA-B0-5711     TCGA-B0-5713 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5812     TCGA-B2-3924     TCGA-B2-4098     TCGA-B2-4099 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B2-4101     TCGA-B2-4102     TCGA-B2-5633     TCGA-B2-5635 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B2-5641     TCGA-B4-5377     TCGA-B8-4143     TCGA-B8-4146 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B8-4148     TCGA-B8-4151     TCGA-B8-4153     TCGA-B8-4154 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B8-4620     TCGA-B8-4621     TCGA-B8-4622     TCGA-B8-5158 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B8-5159     TCGA-B8-5163     TCGA-B8-5164     TCGA-B8-5165 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B8-5545     TCGA-B8-5546     TCGA-B8-5549     TCGA-B8-5551 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B8-5552     TCGA-BP-4161     TCGA-BP-4162     TCGA-BP-4163 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4164     TCGA-BP-4167     TCGA-BP-4770     TCGA-BP-4782 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-BP-4801     TCGA-BP-4960     TCGA-BP-4961     TCGA-BP-4962 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4963     TCGA-BP-4964     TCGA-BP-4967     TCGA-BP-4968 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4970     TCGA-BP-4971     TCGA-BP-4972     TCGA-BP-4973 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4974     TCGA-BP-4975     TCGA-BP-4976     TCGA-BP-4977 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4981     TCGA-BP-4982     TCGA-BP-4983     TCGA-BP-4985 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4986     TCGA-BP-4987     TCGA-BP-4988     TCGA-BP-4989 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4991     TCGA-BP-4992     TCGA-BP-4993     TCGA-BP-4995 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4998     TCGA-BP-4999     TCGA-BP-5000     TCGA-BP-5001 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5004     TCGA-BP-5006     TCGA-BP-5007     TCGA-BP-5008 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5009     TCGA-BP-5010     TCGA-BP-5168     TCGA-BP-5169 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5170     TCGA-BP-5173     TCGA-BP-5174     TCGA-BP-5175 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5176     TCGA-BP-5177     TCGA-BP-5178     TCGA-BP-5180 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5182     TCGA-BP-5183     TCGA-BP-5184     TCGA-BP-5185 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5186     TCGA-BP-5187     TCGA-BP-5189     TCGA-BP-5190 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5191     TCGA-BP-5192     TCGA-BP-5194     TCGA-BP-5195 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5196     TCGA-BP-5198     TCGA-BP-5199     TCGA-BP-5200 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5201     TCGA-BP-5202     TCGA-CJ-4634     TCGA-CJ-4636 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-4637     TCGA-CJ-4638     TCGA-CJ-4639     TCGA-CJ-4640 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-4641     TCGA-CJ-4643     TCGA-CJ-4644     TCGA-CJ-4882 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-4897     TCGA-CJ-4899     TCGA-CJ-4901     TCGA-CJ-4902 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-4903     TCGA-CJ-4904     TCGA-CJ-4905     TCGA-CJ-4907 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-4908     TCGA-CJ-4912     TCGA-CJ-4913     TCGA-CJ-4916 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-4918     TCGA-CJ-4920     TCGA-CJ-4923     TCGA-CJ-5671 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-5672     TCGA-CJ-5675     TCGA-CJ-5676     TCGA-CJ-5677 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-CJ-5678     TCGA-CJ-5679     TCGA-CJ-5680     TCGA-CJ-5681 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-5682     TCGA-CJ-5683     TCGA-CJ-5684     TCGA-CJ-5686 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-6027     TCGA-CJ-6028     TCGA-CJ-6030     TCGA-CJ-6031 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-6032     TCGA-CJ-6033     TCGA-CW-5580     TCGA-CW-5581 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CW-5583     TCGA-CW-5584     TCGA-CW-5585     TCGA-CW-5588 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CW-5589     TCGA-CW-5591     TCGA-CW-6087     TCGA-CW-6090 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CW-6093     TCGA-CZ-4853     TCGA-CZ-4856     TCGA-CZ-4859 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CZ-4863     TCGA-CZ-4866     TCGA-CZ-5451     TCGA-CZ-5452 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CZ-5453     TCGA-CZ-5454     TCGA-CZ-5456     TCGA-CZ-5457 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CZ-5458     TCGA-CZ-5459     TCGA-CZ-5460     TCGA-CZ-5461 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CZ-5462     TCGA-CZ-5463     TCGA-CZ-5464     TCGA-CZ-5465 
"TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CZ-5466     TCGA-CZ-5467     TCGA-CZ-5468     TCGA-CZ-5469 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CZ-5982     TCGA-CZ-5984     TCGA-CZ-5985     TCGA-CZ-5986 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CZ-5987     TCGA-CZ-5988     TCGA-CZ-5989     TCGA-EU-5904 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EU-5905     TCGA-EU-5906     TCGA-EU-5907 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3308     TCGA-A3-3311     TCGA-A3-3316     TCGA-A3-3317 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3319     TCGA-A3-3320     TCGA-A3-3322     TCGA-A3-3323 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3324     TCGA-A3-3326     TCGA-A3-3346     TCGA-A3-3347 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3349     TCGA-A3-3351     TCGA-A3-3357     TCGA-A3-3358 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3362     TCGA-A3-3363     TCGA-A3-3365     TCGA-A3-3367 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3370     TCGA-A3-3372     TCGA-A3-3373     TCGA-A3-3376 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3378     TCGA-A3-3380     TCGA-A3-3382     TCGA-A3-3383 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3385     TCGA-A3-3387     TCGA-AK-3429     TCGA-AK-3430 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AK-3436     TCGA-AK-3444     TCGA-AK-3451     TCGA-AK-3455 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AK-3456     TCGA-AK-3458     TCGA-B0-4700     TCGA-B0-4706 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-4710     TCGA-B0-4712     TCGA-B0-4810     TCGA-B0-4811 
  "TP53 MUTATED" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-B0-4815     TCGA-B0-4816     TCGA-B0-4818     TCGA-B0-4823 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-4827     TCGA-B0-4842     TCGA-B0-4852     TCGA-B0-4945 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5075     TCGA-B0-5077     TCGA-B0-5080     TCGA-B0-5081 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5085     TCGA-B0-5088     TCGA-B0-5092     TCGA-B0-5094 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5095     TCGA-B0-5096     TCGA-B0-5097     TCGA-B0-5099 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5100     TCGA-B0-5102     TCGA-B0-5104     TCGA-B0-5106 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5107     TCGA-B0-5108     TCGA-B0-5109     TCGA-B0-5110 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5113     TCGA-B0-5115     TCGA-B0-5116     TCGA-B0-5119 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5120     TCGA-B0-5121     TCGA-B0-5399     TCGA-B0-5400 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5402     TCGA-B0-5691     TCGA-B0-5692     TCGA-B0-5693 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5694     TCGA-B0-5695     TCGA-B0-5696     TCGA-B0-5697 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5698     TCGA-B0-5699     TCGA-B0-5701     TCGA-B0-5702 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5703     TCGA-B0-5705     TCGA-B0-5706     TCGA-B0-5707 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5709     TCGA-B0-5710     TCGA-B0-5711     TCGA-B0-5713 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5812     TCGA-B2-3924     TCGA-B2-4098     TCGA-B2-4099 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B2-4101     TCGA-B2-4102     TCGA-B2-5633     TCGA-B2-5635 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B2-5641     TCGA-B4-5377     TCGA-B8-4143     TCGA-B8-4146 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B8-4148     TCGA-B8-4151     TCGA-B8-4153     TCGA-B8-4154 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B8-4620     TCGA-B8-4621     TCGA-B8-4622     TCGA-B8-5158 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B8-5159     TCGA-B8-5163     TCGA-B8-5164     TCGA-B8-5165 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B8-5545     TCGA-B8-5546     TCGA-B8-5549     TCGA-B8-5551 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B8-5552     TCGA-BP-4161     TCGA-BP-4162     TCGA-BP-4163 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4164     TCGA-BP-4167     TCGA-BP-4770     TCGA-BP-4782 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-BP-4801     TCGA-BP-4960     TCGA-BP-4961     TCGA-BP-4962 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4963     TCGA-BP-4964     TCGA-BP-4967     TCGA-BP-4968 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4970     TCGA-BP-4971     TCGA-BP-4972     TCGA-BP-4973 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4974     TCGA-BP-4975     TCGA-BP-4976     TCGA-BP-4977 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4981     TCGA-BP-4982     TCGA-BP-4983     TCGA-BP-4985 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4986     TCGA-BP-4987     TCGA-BP-4988     TCGA-BP-4989 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4991     TCGA-BP-4992     TCGA-BP-4993     TCGA-BP-4995 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4998     TCGA-BP-4999     TCGA-BP-5000     TCGA-BP-5001 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5004     TCGA-BP-5006     TCGA-BP-5007     TCGA-BP-5008 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5009     TCGA-BP-5010     TCGA-BP-5168     TCGA-BP-5169 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5170     TCGA-BP-5173     TCGA-BP-5174     TCGA-BP-5175 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5176     TCGA-BP-5177     TCGA-BP-5178     TCGA-BP-5180 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5182     TCGA-BP-5183     TCGA-BP-5184     TCGA-BP-5185 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5186     TCGA-BP-5187     TCGA-BP-5189     TCGA-BP-5190 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5191     TCGA-BP-5192     TCGA-BP-5194     TCGA-BP-5195 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5196     TCGA-BP-5198     TCGA-BP-5199     TCGA-BP-5200 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5201     TCGA-BP-5202     TCGA-CJ-4634     TCGA-CJ-4636 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-4637     TCGA-CJ-4638     TCGA-CJ-4639     TCGA-CJ-4640 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-4641     TCGA-CJ-4643     TCGA-CJ-4644     TCGA-CJ-4882 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-4897     TCGA-CJ-4899     TCGA-CJ-4901     TCGA-CJ-4902 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-4903     TCGA-CJ-4904     TCGA-CJ-4905     TCGA-CJ-4907 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-4908     TCGA-CJ-4912     TCGA-CJ-4913     TCGA-CJ-4916 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-4918     TCGA-CJ-4920     TCGA-CJ-4923     TCGA-CJ-5671 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-5672     TCGA-CJ-5675     TCGA-CJ-5676     TCGA-CJ-5677 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-CJ-5678     TCGA-CJ-5679     TCGA-CJ-5680     TCGA-CJ-5681 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-5682     TCGA-CJ-5683     TCGA-CJ-5684     TCGA-CJ-5686 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-6027     TCGA-CJ-6028     TCGA-CJ-6030     TCGA-CJ-6031 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-6032     TCGA-CJ-6033     TCGA-CW-5580     TCGA-CW-5581 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CW-5583     TCGA-CW-5584     TCGA-CW-5585     TCGA-CW-5588 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CW-5589     TCGA-CW-5591     TCGA-CW-6087     TCGA-CW-6090 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CW-6093     TCGA-CZ-4853     TCGA-CZ-4856     TCGA-CZ-4859 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CZ-4863     TCGA-CZ-4866     TCGA-CZ-5451     TCGA-CZ-5452 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CZ-5453     TCGA-CZ-5454     TCGA-CZ-5456     TCGA-CZ-5457 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CZ-5458     TCGA-CZ-5459     TCGA-CZ-5460     TCGA-CZ-5461 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CZ-5462     TCGA-CZ-5463     TCGA-CZ-5464     TCGA-CZ-5465 
"TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CZ-5466     TCGA-CZ-5467     TCGA-CZ-5468     TCGA-CZ-5469 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CZ-5982     TCGA-CZ-5984     TCGA-CZ-5985     TCGA-CZ-5986 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CZ-5987     TCGA-CZ-5988     TCGA-CZ-5989     TCGA-EU-5904 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EU-5905     TCGA-EU-5906     TCGA-EU-5907 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3308     TCGA-A3-3311     TCGA-A3-3316     TCGA-A3-3317 
  "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3319     TCGA-A3-3320     TCGA-A3-3322     TCGA-A3-3323 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3324     TCGA-A3-3326     TCGA-A3-3346     TCGA-A3-3347 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3349     TCGA-A3-3351     TCGA-A3-3357     TCGA-A3-3358 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3362     TCGA-A3-3363     TCGA-A3-3365     TCGA-A3-3367 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3370     TCGA-A3-3372     TCGA-A3-3373     TCGA-A3-3376 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3378     TCGA-A3-3380     TCGA-A3-3382     TCGA-A3-3383 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-A3-3385     TCGA-A3-3387     TCGA-AK-3429     TCGA-AK-3430 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AK-3436     TCGA-AK-3444     TCGA-AK-3451     TCGA-AK-3455 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-AK-3456     TCGA-AK-3458     TCGA-B0-4700     TCGA-B0-4706 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-4710     TCGA-B0-4712     TCGA-B0-4810     TCGA-B0-4811 
  "TP53 MUTATED" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-B0-4815     TCGA-B0-4816     TCGA-B0-4818     TCGA-B0-4823 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-4827     TCGA-B0-4842     TCGA-B0-4852     TCGA-B0-4945 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5075     TCGA-B0-5077     TCGA-B0-5080     TCGA-B0-5081 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5085     TCGA-B0-5088     TCGA-B0-5092     TCGA-B0-5094 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5095     TCGA-B0-5096     TCGA-B0-5097     TCGA-B0-5099 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5100     TCGA-B0-5102     TCGA-B0-5104     TCGA-B0-5106 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5107     TCGA-B0-5108     TCGA-B0-5109     TCGA-B0-5110 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5113     TCGA-B0-5115     TCGA-B0-5116     TCGA-B0-5119 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5120     TCGA-B0-5121     TCGA-B0-5399     TCGA-B0-5400 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5402     TCGA-B0-5691     TCGA-B0-5692     TCGA-B0-5693 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5694     TCGA-B0-5695     TCGA-B0-5696     TCGA-B0-5697 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5698     TCGA-B0-5699     TCGA-B0-5701     TCGA-B0-5702 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5703     TCGA-B0-5705     TCGA-B0-5706     TCGA-B0-5707 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5709     TCGA-B0-5710     TCGA-B0-5711     TCGA-B0-5713 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B0-5812     TCGA-B2-3924     TCGA-B2-4098     TCGA-B2-4099 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B2-4101     TCGA-B2-4102     TCGA-B2-5633     TCGA-B2-5635 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B2-5641     TCGA-B4-5377     TCGA-B8-4143     TCGA-B8-4146 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B8-4148     TCGA-B8-4151     TCGA-B8-4153     TCGA-B8-4154 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B8-4620     TCGA-B8-4621     TCGA-B8-4622     TCGA-B8-5158 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B8-5159     TCGA-B8-5163     TCGA-B8-5164     TCGA-B8-5165 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B8-5545     TCGA-B8-5546     TCGA-B8-5549     TCGA-B8-5551 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-B8-5552     TCGA-BP-4161     TCGA-BP-4162     TCGA-BP-4163 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4164     TCGA-BP-4167     TCGA-BP-4770     TCGA-BP-4782 
"TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" 
    TCGA-BP-4801     TCGA-BP-4960     TCGA-BP-4961     TCGA-BP-4962 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4963     TCGA-BP-4964     TCGA-BP-4967     TCGA-BP-4968 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4970     TCGA-BP-4971     TCGA-BP-4972     TCGA-BP-4973 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4974     TCGA-BP-4975     TCGA-BP-4976     TCGA-BP-4977 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4981     TCGA-BP-4982     TCGA-BP-4983     TCGA-BP-4985 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4986     TCGA-BP-4987     TCGA-BP-4988     TCGA-BP-4989 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4991     TCGA-BP-4992     TCGA-BP-4993     TCGA-BP-4995 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-4998     TCGA-BP-4999     TCGA-BP-5000     TCGA-BP-5001 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5004     TCGA-BP-5006     TCGA-BP-5007     TCGA-BP-5008 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5009     TCGA-BP-5010     TCGA-BP-5168     TCGA-BP-5169 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5170     TCGA-BP-5173     TCGA-BP-5174     TCGA-BP-5175 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5176     TCGA-BP-5177     TCGA-BP-5178     TCGA-BP-5180 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5182     TCGA-BP-5183     TCGA-BP-5184     TCGA-BP-5185 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5186     TCGA-BP-5187     TCGA-BP-5189     TCGA-BP-5190 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5191     TCGA-BP-5192     TCGA-BP-5194     TCGA-BP-5195 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5196     TCGA-BP-5198     TCGA-BP-5199     TCGA-BP-5200 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-BP-5201     TCGA-BP-5202     TCGA-CJ-4634     TCGA-CJ-4636 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-4637     TCGA-CJ-4638     TCGA-CJ-4639     TCGA-CJ-4640 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-4641     TCGA-CJ-4643     TCGA-CJ-4644     TCGA-CJ-4882 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-4897     TCGA-CJ-4899     TCGA-CJ-4901     TCGA-CJ-4902 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-4903     TCGA-CJ-4904     TCGA-CJ-4905     TCGA-CJ-4907 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-4908     TCGA-CJ-4912     TCGA-CJ-4913     TCGA-CJ-4916 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-4918     TCGA-CJ-4920     TCGA-CJ-4923     TCGA-CJ-5671 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-5672     TCGA-CJ-5675     TCGA-CJ-5676     TCGA-CJ-5677 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE"   "TP53 MUTATED" 
    TCGA-CJ-5678     TCGA-CJ-5679     TCGA-CJ-5680     TCGA-CJ-5681 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-5682     TCGA-CJ-5683     TCGA-CJ-5684     TCGA-CJ-5686 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-6027     TCGA-CJ-6028     TCGA-CJ-6030     TCGA-CJ-6031 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CJ-6032     TCGA-CJ-6033     TCGA-CW-5580     TCGA-CW-5581 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CW-5583     TCGA-CW-5584     TCGA-CW-5585     TCGA-CW-5588 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CW-5589     TCGA-CW-5591     TCGA-CW-6087     TCGA-CW-6090 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CW-6093     TCGA-CZ-4853     TCGA-CZ-4856     TCGA-CZ-4859 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CZ-4863     TCGA-CZ-4866     TCGA-CZ-5451     TCGA-CZ-5452 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CZ-5453     TCGA-CZ-5454     TCGA-CZ-5456     TCGA-CZ-5457 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CZ-5458     TCGA-CZ-5459     TCGA-CZ-5460     TCGA-CZ-5461 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CZ-5462     TCGA-CZ-5463     TCGA-CZ-5464     TCGA-CZ-5465 
"TP53 WILD-TYPE"   "TP53 MUTATED" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CZ-5466     TCGA-CZ-5467     TCGA-CZ-5468     TCGA-CZ-5469 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CZ-5982     TCGA-CZ-5984     TCGA-CZ-5985     TCGA-CZ-5986 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-CZ-5987     TCGA-CZ-5988     TCGA-CZ-5989     TCGA-EU-5904 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
    TCGA-EU-5905     TCGA-EU-5906     TCGA-EU-5907 
"TP53 WILD-TYPE" "TP53 WILD-TYPE" "TP53 WILD-TYPE" 
[1] "hr=" "6.5"
D7V2, continuous
D7V3, binary
                cls
clus               0   1
  TP53 MUTATED     4   2
  TP53 WILD-TYPE  98 189
[1] "tbl2"
                cls
clus             [,1] [,2]
  TP53 MUTATED      4    2
  TP53 WILD-TYPE   98  189
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  FEMALE            4             98
  MALE              2            189
D7V4, continuous
D7V5, binary
                cls
clus               0   1
  TP53 MUTATED     5   1
  TP53 WILD-TYPE 249  38
[1] "tbl2"
                cls
clus             [,1] [,2]
  TP53 MUTATED      5    1
  TP53 WILD-TYPE  249   38
    clus
vv   TP53 MUTATED TP53 WILD-TYPE
  M0            5            249
  M1            1             38
                vv
clus              N0  N1  NX
  TP53 MUTATED     3   1   2
  TP53 WILD-TYPE 132  10 145
D7V6, multiclass
    clus
vv   TP53 MUTATED TP53 WILD-TYPE
  N0            3            132
  N1            1             10
  NX            2            145
D7V7, continuous
                vv
clus             STAGE I STAGE II STAGE III STAGE IV
  TP53 MUTATED         0        1         3        2
  TP53 WILD-TYPE     144       31        74       38
D7V8, multiclass
           clus
vv          TP53 MUTATED TP53 WILD-TYPE
  STAGE I              0            144
  STAGE II             1             31
  STAGE III            3             74
  STAGE IV             2             38

Clustering(8) Variable = PTEN MUTATION ANALYSIS
D8V1, survival
                sevent
clus2              0   1
  PTEN MUTATED     7   2
  PTEN WILD-TYPE 207  75
  PTEN MUTATED PTEN WILD-TYPE 
             9            282 
  PTEN MUTATED PTEN WILD-TYPE 
             2             75 
$`PTEN MUTATED`
TCGA-A3-3308 TCGA-A3-3316 TCGA-B0-4810 TCGA-B8-5158 TCGA-BP-4161 TCGA-BP-5195 
        0.53        49.08         8.75         2.96        90.28        24.59 
TCGA-BP-5199 TCGA-CJ-4920 TCGA-EU-5907 
       44.52         4.57         4.14 

$`PTEN WILD-TYPE`
TCGA-A3-3311 TCGA-A3-3317 TCGA-A3-3319 TCGA-A3-3320 TCGA-A3-3322 TCGA-A3-3323 
       39.12        49.02        37.15        49.58        48.56        36.33 
TCGA-A3-3324 TCGA-A3-3326 TCGA-A3-3346 TCGA-A3-3347 TCGA-A3-3349 TCGA-A3-3351 
       38.99        37.38         4.50        36.07        45.53        29.92 
TCGA-A3-3357 TCGA-A3-3358 TCGA-A3-3362 TCGA-A3-3363 TCGA-A3-3365 TCGA-A3-3367 
       46.85        42.97        51.25        10.49        28.67        34.65 
TCGA-A3-3370 TCGA-A3-3372 TCGA-A3-3373 TCGA-A3-3376 TCGA-A3-3378 TCGA-A3-3380 
       25.51        24.16        10.98        35.18        20.71        18.64 
TCGA-A3-3382 TCGA-A3-3383 TCGA-A3-3385 TCGA-A3-3387 TCGA-AK-3429 TCGA-AK-3430 
       18.87        28.31        23.87        20.25        66.31        15.78 
TCGA-AK-3436 TCGA-AK-3444 TCGA-AK-3451 TCGA-AK-3455 TCGA-AK-3456 TCGA-AK-3458 
       67.17        48.36        48.69        22.45         1.51        38.40 
TCGA-B0-4700 TCGA-B0-4706 TCGA-B0-4710 TCGA-B0-4712 TCGA-B0-4811 TCGA-B0-4815 
       65.06         0.85         0.16        43.96        39.32        49.02 
TCGA-B0-4816 TCGA-B0-4818 TCGA-B0-4823 TCGA-B0-4827 TCGA-B0-4842 TCGA-B0-4852 
       35.54        14.01        14.93        29.06        53.79        35.47 
TCGA-B0-4945 TCGA-B0-5075 TCGA-B0-5077 TCGA-B0-5080 TCGA-B0-5081 TCGA-B0-5085 
       70.52        19.99        42.44         7.30         7.66        25.28 
TCGA-B0-5088 TCGA-B0-5092 TCGA-B0-5094 TCGA-B0-5095 TCGA-B0-5096 TCGA-B0-5097 
       14.24        15.09        10.95         8.05         2.20         4.96 
TCGA-B0-5099 TCGA-B0-5100 TCGA-B0-5102 TCGA-B0-5104 TCGA-B0-5106 TCGA-B0-5107 
       15.95        62.89        90.84        90.44        52.50        30.48 
TCGA-B0-5108 TCGA-B0-5109 TCGA-B0-5110 TCGA-B0-5113 TCGA-B0-5115 TCGA-B0-5116 
        5.33        19.27        18.41         0.72         2.96         3.39 
TCGA-B0-5119 TCGA-B0-5120 TCGA-B0-5121 TCGA-B0-5399 TCGA-B0-5400 TCGA-B0-5402 
        1.58         1.81         6.12         6.25        22.26         0.33 
TCGA-B0-5691 TCGA-B0-5692 TCGA-B0-5693 TCGA-B0-5694 TCGA-B0-5695 TCGA-B0-5696 
       91.43        48.89        60.89        15.42        34.26        31.04 
TCGA-B0-5697 TCGA-B0-5698 TCGA-B0-5699 TCGA-B0-5701 TCGA-B0-5702 TCGA-B0-5703 
       37.32        71.70        79.73        41.95        38.07         8.61 
TCGA-B0-5705 TCGA-B0-5706 TCGA-B0-5707 TCGA-B0-5709 TCGA-B0-5710 TCGA-B0-5711 
      109.64        79.36        85.22        77.49        31.46        83.93 
TCGA-B0-5713 TCGA-B0-5812 TCGA-B2-3924 TCGA-B2-4098 TCGA-B2-4099 TCGA-B2-4101 
       61.28        76.41         6.38         1.64         3.62         2.96 
TCGA-B2-4102 TCGA-B2-5633 TCGA-B2-5635 TCGA-B2-5641 TCGA-B4-5377 TCGA-B8-4143 
        0.49         7.04        10.36         5.52         9.57        23.31 
TCGA-B8-4146 TCGA-B8-4148 TCGA-B8-4151 TCGA-B8-4153 TCGA-B8-4154 TCGA-B8-4620 
       16.80        12.46         9.17        13.28         8.38         7.43 
TCGA-B8-4621 TCGA-B8-4622 TCGA-B8-5159 TCGA-B8-5163 TCGA-B8-5164 TCGA-B8-5165 
        7.07         5.95         4.37         0.13         0.76         0.26 
TCGA-B8-5545 TCGA-B8-5546 TCGA-B8-5549 TCGA-B8-5551 TCGA-B8-5552 TCGA-BP-4162 
        8.15         0.46         6.38         0.49         7.20       101.06 
TCGA-BP-4163 TCGA-BP-4164 TCGA-BP-4167 TCGA-BP-4770 TCGA-BP-4782 TCGA-BP-4801 
       93.34        32.61        89.36        10.82        11.64        36.95 
TCGA-BP-4960 TCGA-BP-4961 TCGA-BP-4962 TCGA-BP-4963 TCGA-BP-4964 TCGA-BP-4967 
       71.41        63.62        58.68        60.30        61.22         6.71 
TCGA-BP-4968 TCGA-BP-4970 TCGA-BP-4971 TCGA-BP-4972 TCGA-BP-4973 TCGA-BP-4974 
       57.37        14.20        48.89        49.35        45.50         7.23 
TCGA-BP-4975 TCGA-BP-4976 TCGA-BP-4977 TCGA-BP-4981 TCGA-BP-4982 TCGA-BP-4983 
       47.11        53.65        14.93        36.07        33.30        46.42 
TCGA-BP-4985 TCGA-BP-4986 TCGA-BP-4987 TCGA-BP-4988 TCGA-BP-4989 TCGA-BP-4991 
       31.27        25.81        36.95        27.19         3.85        34.32 
TCGA-BP-4992 TCGA-BP-4993 TCGA-BP-4995 TCGA-BP-4998 TCGA-BP-4999 TCGA-BP-5000 
       16.44         5.79        45.07        30.61        41.62        18.51 
TCGA-BP-5001 TCGA-BP-5004 TCGA-BP-5006 TCGA-BP-5007 TCGA-BP-5008 TCGA-BP-5009 
       38.70        37.02        27.62        37.48        35.21        35.90 
TCGA-BP-5010 TCGA-BP-5168 TCGA-BP-5169 TCGA-BP-5170 TCGA-BP-5173 TCGA-BP-5174 
       28.83        48.10         6.31        79.27         1.78        74.20 
TCGA-BP-5175 TCGA-BP-5176 TCGA-BP-5177 TCGA-BP-5178 TCGA-BP-5180 TCGA-BP-5182 
       30.64        52.27         9.63        62.86        62.20        38.30 
TCGA-BP-5183 TCGA-BP-5184 TCGA-BP-5185 TCGA-BP-5186 TCGA-BP-5187 TCGA-BP-5189 
       36.23        37.25        37.22        22.78        13.35        27.02 
TCGA-BP-5190 TCGA-BP-5191 TCGA-BP-5192 TCGA-BP-5194 TCGA-BP-5196 TCGA-BP-5198 
       33.21        31.76        23.47        13.41        33.47        19.82 
TCGA-BP-5200 TCGA-BP-5201 TCGA-BP-5202 TCGA-CJ-4634 TCGA-CJ-4636 TCGA-CJ-4637 
       28.96        31.27         0.95        59.84        63.25        73.22 
TCGA-CJ-4638 TCGA-CJ-4639 TCGA-CJ-4640 TCGA-CJ-4641 TCGA-CJ-4643 TCGA-CJ-4644 
       14.17        75.88        65.69        54.61        58.92        11.05 
TCGA-CJ-4882 TCGA-CJ-4897 TCGA-CJ-4899 TCGA-CJ-4901 TCGA-CJ-4902 TCGA-CJ-4903 
       61.91        59.44        50.20        47.67        49.94        51.25 
TCGA-CJ-4904 TCGA-CJ-4905 TCGA-CJ-4907 TCGA-CJ-4908 TCGA-CJ-4912 TCGA-CJ-4913 
       58.92        49.15        49.25        50.30        54.44        38.56 
TCGA-CJ-4916 TCGA-CJ-4918 TCGA-CJ-4923 TCGA-CJ-5671 TCGA-CJ-5672 TCGA-CJ-5675 
       45.11         3.02        18.81        63.85        72.00        79.86 
TCGA-CJ-5676 TCGA-CJ-5677 TCGA-CJ-5678 TCGA-CJ-5679 TCGA-CJ-5680 TCGA-CJ-5681 
       84.66        25.71        18.84        22.29        25.25        18.12 
TCGA-CJ-5682 TCGA-CJ-5683 TCGA-CJ-5684 TCGA-CJ-5686 TCGA-CJ-6027 TCGA-CJ-6028 
       61.91        62.10        73.32        67.00        60.99        53.42 
TCGA-CJ-6030 TCGA-CJ-6031 TCGA-CJ-6032 TCGA-CJ-6033 TCGA-CW-5580 TCGA-CW-5581 
       75.55        62.63        83.77         7.36        64.57        92.02 
TCGA-CW-5583 TCGA-CW-5584 TCGA-CW-5585 TCGA-CW-5588 TCGA-CW-5589 TCGA-CW-5591 
       81.83         5.39        85.78        66.28        78.15        74.63 
TCGA-CW-6087 TCGA-CW-6090 TCGA-CW-6093 TCGA-CZ-4853 TCGA-CZ-4856 TCGA-CZ-4859 
        1.35        75.88        79.89        25.45         0.59        58.75 
TCGA-CZ-4863 TCGA-CZ-4866 TCGA-CZ-5451 TCGA-CZ-5452 TCGA-CZ-5453 TCGA-CZ-5454 
       55.56        58.13        54.84        51.16         0.82        23.74 
TCGA-CZ-5456 TCGA-CZ-5457 TCGA-CZ-5458 TCGA-CZ-5459 TCGA-CZ-5460 TCGA-CZ-5461 
       51.22        50.86        51.22        49.81        47.01        10.85 
TCGA-CZ-5462 TCGA-CZ-5463 TCGA-CZ-5464 TCGA-CZ-5465 TCGA-CZ-5466 TCGA-CZ-5467 
       10.22        21.76        49.05        45.27        22.52         2.40 
TCGA-CZ-5468 TCGA-CZ-5469 TCGA-CZ-5982 TCGA-CZ-5984 TCGA-CZ-5985 TCGA-CZ-5986 
        1.94        31.07        67.13        49.02        53.56        12.26 
TCGA-CZ-5987 TCGA-CZ-5988 TCGA-CZ-5989 TCGA-EU-5904 TCGA-EU-5905 TCGA-EU-5906 
       14.30        22.78        52.57        18.08         3.88         6.77 

  PTEN MUTATED PTEN WILD-TYPE 
          0.53           0.13 
  PTEN MUTATED PTEN WILD-TYPE 
         90.28         109.64 
  PTEN MUTATED PTEN WILD-TYPE 
         8.750         34.485 
[1] "0.5 - 90.3 (8.8)"   "0.1 - 109.6 (34.5)"
    TCGA-A3-3308     TCGA-A3-3311     TCGA-A3-3316     TCGA-A3-3317 
  "PTEN MUTATED" "PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" 
    TCGA-A3-3319     TCGA-A3-3320     TCGA-A3-3322     TCGA-A3-3323 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-A3-3324     TCGA-A3-3326     TCGA-A3-3346     TCGA-A3-3347 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-A3-3349     TCGA-A3-3351     TCGA-A3-3357     TCGA-A3-3358 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-A3-3362     TCGA-A3-3363     TCGA-A3-3365     TCGA-A3-3367 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-A3-3370     TCGA-A3-3372     TCGA-A3-3373     TCGA-A3-3376 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-A3-3378     TCGA-A3-3380     TCGA-A3-3382     TCGA-A3-3383 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-A3-3385     TCGA-A3-3387     TCGA-AK-3429     TCGA-AK-3430 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-AK-3436     TCGA-AK-3444     TCGA-AK-3451     TCGA-AK-3455 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-AK-3456     TCGA-AK-3458     TCGA-B0-4700     TCGA-B0-4706 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-4710     TCGA-B0-4712     TCGA-B0-4810     TCGA-B0-4811 
"PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" 
    TCGA-B0-4815     TCGA-B0-4816     TCGA-B0-4818     TCGA-B0-4823 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-4827     TCGA-B0-4842     TCGA-B0-4852     TCGA-B0-4945 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5075     TCGA-B0-5077     TCGA-B0-5080     TCGA-B0-5081 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5085     TCGA-B0-5088     TCGA-B0-5092     TCGA-B0-5094 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5095     TCGA-B0-5096     TCGA-B0-5097     TCGA-B0-5099 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5100     TCGA-B0-5102     TCGA-B0-5104     TCGA-B0-5106 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5107     TCGA-B0-5108     TCGA-B0-5109     TCGA-B0-5110 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5113     TCGA-B0-5115     TCGA-B0-5116     TCGA-B0-5119 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5120     TCGA-B0-5121     TCGA-B0-5399     TCGA-B0-5400 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5402     TCGA-B0-5691     TCGA-B0-5692     TCGA-B0-5693 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5694     TCGA-B0-5695     TCGA-B0-5696     TCGA-B0-5697 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5698     TCGA-B0-5699     TCGA-B0-5701     TCGA-B0-5702 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5703     TCGA-B0-5705     TCGA-B0-5706     TCGA-B0-5707 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5709     TCGA-B0-5710     TCGA-B0-5711     TCGA-B0-5713 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5812     TCGA-B2-3924     TCGA-B2-4098     TCGA-B2-4099 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B2-4101     TCGA-B2-4102     TCGA-B2-5633     TCGA-B2-5635 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B2-5641     TCGA-B4-5377     TCGA-B8-4143     TCGA-B8-4146 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B8-4148     TCGA-B8-4151     TCGA-B8-4153     TCGA-B8-4154 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B8-4620     TCGA-B8-4621     TCGA-B8-4622     TCGA-B8-5158 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" 
    TCGA-B8-5159     TCGA-B8-5163     TCGA-B8-5164     TCGA-B8-5165 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B8-5545     TCGA-B8-5546     TCGA-B8-5549     TCGA-B8-5551 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B8-5552     TCGA-BP-4161     TCGA-BP-4162     TCGA-BP-4163 
"PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4164     TCGA-BP-4167     TCGA-BP-4770     TCGA-BP-4782 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4801     TCGA-BP-4960     TCGA-BP-4961     TCGA-BP-4962 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4963     TCGA-BP-4964     TCGA-BP-4967     TCGA-BP-4968 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4970     TCGA-BP-4971     TCGA-BP-4972     TCGA-BP-4973 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4974     TCGA-BP-4975     TCGA-BP-4976     TCGA-BP-4977 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4981     TCGA-BP-4982     TCGA-BP-4983     TCGA-BP-4985 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4986     TCGA-BP-4987     TCGA-BP-4988     TCGA-BP-4989 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4991     TCGA-BP-4992     TCGA-BP-4993     TCGA-BP-4995 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4998     TCGA-BP-4999     TCGA-BP-5000     TCGA-BP-5001 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-5004     TCGA-BP-5006     TCGA-BP-5007     TCGA-BP-5008 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-5009     TCGA-BP-5010     TCGA-BP-5168     TCGA-BP-5169 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-5170     TCGA-BP-5173     TCGA-BP-5174     TCGA-BP-5175 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-5176     TCGA-BP-5177     TCGA-BP-5178     TCGA-BP-5180 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-5182     TCGA-BP-5183     TCGA-BP-5184     TCGA-BP-5185 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-5186     TCGA-BP-5187     TCGA-BP-5189     TCGA-BP-5190 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-5191     TCGA-BP-5192     TCGA-BP-5194     TCGA-BP-5195 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" 
    TCGA-BP-5196     TCGA-BP-5198     TCGA-BP-5199     TCGA-BP-5200 
"PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" 
    TCGA-BP-5201     TCGA-BP-5202     TCGA-CJ-4634     TCGA-CJ-4636 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-4637     TCGA-CJ-4638     TCGA-CJ-4639     TCGA-CJ-4640 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-4641     TCGA-CJ-4643     TCGA-CJ-4644     TCGA-CJ-4882 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-4897     TCGA-CJ-4899     TCGA-CJ-4901     TCGA-CJ-4902 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-4903     TCGA-CJ-4904     TCGA-CJ-4905     TCGA-CJ-4907 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-4908     TCGA-CJ-4912     TCGA-CJ-4913     TCGA-CJ-4916 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-4918     TCGA-CJ-4920     TCGA-CJ-4923     TCGA-CJ-5671 
"PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-5672     TCGA-CJ-5675     TCGA-CJ-5676     TCGA-CJ-5677 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-5678     TCGA-CJ-5679     TCGA-CJ-5680     TCGA-CJ-5681 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-5682     TCGA-CJ-5683     TCGA-CJ-5684     TCGA-CJ-5686 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-6027     TCGA-CJ-6028     TCGA-CJ-6030     TCGA-CJ-6031 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-6032     TCGA-CJ-6033     TCGA-CW-5580     TCGA-CW-5581 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CW-5583     TCGA-CW-5584     TCGA-CW-5585     TCGA-CW-5588 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CW-5589     TCGA-CW-5591     TCGA-CW-6087     TCGA-CW-6090 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CW-6093     TCGA-CZ-4853     TCGA-CZ-4856     TCGA-CZ-4859 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CZ-4863     TCGA-CZ-4866     TCGA-CZ-5451     TCGA-CZ-5452 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CZ-5453     TCGA-CZ-5454     TCGA-CZ-5456     TCGA-CZ-5457 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CZ-5458     TCGA-CZ-5459     TCGA-CZ-5460     TCGA-CZ-5461 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CZ-5462     TCGA-CZ-5463     TCGA-CZ-5464     TCGA-CZ-5465 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CZ-5466     TCGA-CZ-5467     TCGA-CZ-5468     TCGA-CZ-5469 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CZ-5982     TCGA-CZ-5984     TCGA-CZ-5985     TCGA-CZ-5986 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CZ-5987     TCGA-CZ-5988     TCGA-CZ-5989     TCGA-EU-5904 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EU-5905     TCGA-EU-5906     TCGA-EU-5907 
"PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" 
    TCGA-A3-3308     TCGA-A3-3311     TCGA-A3-3316     TCGA-A3-3317 
  "PTEN MUTATED" "PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" 
    TCGA-A3-3319     TCGA-A3-3320     TCGA-A3-3322     TCGA-A3-3323 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-A3-3324     TCGA-A3-3326     TCGA-A3-3346     TCGA-A3-3347 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-A3-3349     TCGA-A3-3351     TCGA-A3-3357     TCGA-A3-3358 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-A3-3362     TCGA-A3-3363     TCGA-A3-3365     TCGA-A3-3367 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-A3-3370     TCGA-A3-3372     TCGA-A3-3373     TCGA-A3-3376 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-A3-3378     TCGA-A3-3380     TCGA-A3-3382     TCGA-A3-3383 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-A3-3385     TCGA-A3-3387     TCGA-AK-3429     TCGA-AK-3430 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-AK-3436     TCGA-AK-3444     TCGA-AK-3451     TCGA-AK-3455 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-AK-3456     TCGA-AK-3458     TCGA-B0-4700     TCGA-B0-4706 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-4710     TCGA-B0-4712     TCGA-B0-4810     TCGA-B0-4811 
"PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" 
    TCGA-B0-4815     TCGA-B0-4816     TCGA-B0-4818     TCGA-B0-4823 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-4827     TCGA-B0-4842     TCGA-B0-4852     TCGA-B0-4945 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5075     TCGA-B0-5077     TCGA-B0-5080     TCGA-B0-5081 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5085     TCGA-B0-5088     TCGA-B0-5092     TCGA-B0-5094 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5095     TCGA-B0-5096     TCGA-B0-5097     TCGA-B0-5099 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5100     TCGA-B0-5102     TCGA-B0-5104     TCGA-B0-5106 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5107     TCGA-B0-5108     TCGA-B0-5109     TCGA-B0-5110 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5113     TCGA-B0-5115     TCGA-B0-5116     TCGA-B0-5119 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5120     TCGA-B0-5121     TCGA-B0-5399     TCGA-B0-5400 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5402     TCGA-B0-5691     TCGA-B0-5692     TCGA-B0-5693 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5694     TCGA-B0-5695     TCGA-B0-5696     TCGA-B0-5697 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5698     TCGA-B0-5699     TCGA-B0-5701     TCGA-B0-5702 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5703     TCGA-B0-5705     TCGA-B0-5706     TCGA-B0-5707 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5709     TCGA-B0-5710     TCGA-B0-5711     TCGA-B0-5713 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5812     TCGA-B2-3924     TCGA-B2-4098     TCGA-B2-4099 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B2-4101     TCGA-B2-4102     TCGA-B2-5633     TCGA-B2-5635 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B2-5641     TCGA-B4-5377     TCGA-B8-4143     TCGA-B8-4146 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B8-4148     TCGA-B8-4151     TCGA-B8-4153     TCGA-B8-4154 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B8-4620     TCGA-B8-4621     TCGA-B8-4622     TCGA-B8-5158 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" 
    TCGA-B8-5159     TCGA-B8-5163     TCGA-B8-5164     TCGA-B8-5165 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B8-5545     TCGA-B8-5546     TCGA-B8-5549     TCGA-B8-5551 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B8-5552     TCGA-BP-4161     TCGA-BP-4162     TCGA-BP-4163 
"PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4164     TCGA-BP-4167     TCGA-BP-4770     TCGA-BP-4782 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4801     TCGA-BP-4960     TCGA-BP-4961     TCGA-BP-4962 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4963     TCGA-BP-4964     TCGA-BP-4967     TCGA-BP-4968 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4970     TCGA-BP-4971     TCGA-BP-4972     TCGA-BP-4973 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4974     TCGA-BP-4975     TCGA-BP-4976     TCGA-BP-4977 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4981     TCGA-BP-4982     TCGA-BP-4983     TCGA-BP-4985 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4986     TCGA-BP-4987     TCGA-BP-4988     TCGA-BP-4989 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4991     TCGA-BP-4992     TCGA-BP-4993     TCGA-BP-4995 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4998     TCGA-BP-4999     TCGA-BP-5000     TCGA-BP-5001 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-5004     TCGA-BP-5006     TCGA-BP-5007     TCGA-BP-5008 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-5009     TCGA-BP-5010     TCGA-BP-5168     TCGA-BP-5169 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-5170     TCGA-BP-5173     TCGA-BP-5174     TCGA-BP-5175 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-5176     TCGA-BP-5177     TCGA-BP-5178     TCGA-BP-5180 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-5182     TCGA-BP-5183     TCGA-BP-5184     TCGA-BP-5185 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-5186     TCGA-BP-5187     TCGA-BP-5189     TCGA-BP-5190 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-5191     TCGA-BP-5192     TCGA-BP-5194     TCGA-BP-5195 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" 
    TCGA-BP-5196     TCGA-BP-5198     TCGA-BP-5199     TCGA-BP-5200 
"PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" 
    TCGA-BP-5201     TCGA-BP-5202     TCGA-CJ-4634     TCGA-CJ-4636 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-4637     TCGA-CJ-4638     TCGA-CJ-4639     TCGA-CJ-4640 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-4641     TCGA-CJ-4643     TCGA-CJ-4644     TCGA-CJ-4882 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-4897     TCGA-CJ-4899     TCGA-CJ-4901     TCGA-CJ-4902 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-4903     TCGA-CJ-4904     TCGA-CJ-4905     TCGA-CJ-4907 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-4908     TCGA-CJ-4912     TCGA-CJ-4913     TCGA-CJ-4916 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-4918     TCGA-CJ-4920     TCGA-CJ-4923     TCGA-CJ-5671 
"PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-5672     TCGA-CJ-5675     TCGA-CJ-5676     TCGA-CJ-5677 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-5678     TCGA-CJ-5679     TCGA-CJ-5680     TCGA-CJ-5681 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-5682     TCGA-CJ-5683     TCGA-CJ-5684     TCGA-CJ-5686 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-6027     TCGA-CJ-6028     TCGA-CJ-6030     TCGA-CJ-6031 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-6032     TCGA-CJ-6033     TCGA-CW-5580     TCGA-CW-5581 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CW-5583     TCGA-CW-5584     TCGA-CW-5585     TCGA-CW-5588 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CW-5589     TCGA-CW-5591     TCGA-CW-6087     TCGA-CW-6090 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CW-6093     TCGA-CZ-4853     TCGA-CZ-4856     TCGA-CZ-4859 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CZ-4863     TCGA-CZ-4866     TCGA-CZ-5451     TCGA-CZ-5452 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CZ-5453     TCGA-CZ-5454     TCGA-CZ-5456     TCGA-CZ-5457 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CZ-5458     TCGA-CZ-5459     TCGA-CZ-5460     TCGA-CZ-5461 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CZ-5462     TCGA-CZ-5463     TCGA-CZ-5464     TCGA-CZ-5465 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CZ-5466     TCGA-CZ-5467     TCGA-CZ-5468     TCGA-CZ-5469 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CZ-5982     TCGA-CZ-5984     TCGA-CZ-5985     TCGA-CZ-5986 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CZ-5987     TCGA-CZ-5988     TCGA-CZ-5989     TCGA-EU-5904 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EU-5905     TCGA-EU-5906     TCGA-EU-5907 
"PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" 
    TCGA-A3-3308     TCGA-A3-3311     TCGA-A3-3316     TCGA-A3-3317 
  "PTEN MUTATED" "PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" 
    TCGA-A3-3319     TCGA-A3-3320     TCGA-A3-3322     TCGA-A3-3323 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-A3-3324     TCGA-A3-3326     TCGA-A3-3346     TCGA-A3-3347 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-A3-3349     TCGA-A3-3351     TCGA-A3-3357     TCGA-A3-3358 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-A3-3362     TCGA-A3-3363     TCGA-A3-3365     TCGA-A3-3367 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-A3-3370     TCGA-A3-3372     TCGA-A3-3373     TCGA-A3-3376 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-A3-3378     TCGA-A3-3380     TCGA-A3-3382     TCGA-A3-3383 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-A3-3385     TCGA-A3-3387     TCGA-AK-3429     TCGA-AK-3430 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-AK-3436     TCGA-AK-3444     TCGA-AK-3451     TCGA-AK-3455 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-AK-3456     TCGA-AK-3458     TCGA-B0-4700     TCGA-B0-4706 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-4710     TCGA-B0-4712     TCGA-B0-4810     TCGA-B0-4811 
"PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" 
    TCGA-B0-4815     TCGA-B0-4816     TCGA-B0-4818     TCGA-B0-4823 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-4827     TCGA-B0-4842     TCGA-B0-4852     TCGA-B0-4945 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5075     TCGA-B0-5077     TCGA-B0-5080     TCGA-B0-5081 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5085     TCGA-B0-5088     TCGA-B0-5092     TCGA-B0-5094 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5095     TCGA-B0-5096     TCGA-B0-5097     TCGA-B0-5099 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5100     TCGA-B0-5102     TCGA-B0-5104     TCGA-B0-5106 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5107     TCGA-B0-5108     TCGA-B0-5109     TCGA-B0-5110 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5113     TCGA-B0-5115     TCGA-B0-5116     TCGA-B0-5119 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5120     TCGA-B0-5121     TCGA-B0-5399     TCGA-B0-5400 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5402     TCGA-B0-5691     TCGA-B0-5692     TCGA-B0-5693 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5694     TCGA-B0-5695     TCGA-B0-5696     TCGA-B0-5697 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5698     TCGA-B0-5699     TCGA-B0-5701     TCGA-B0-5702 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5703     TCGA-B0-5705     TCGA-B0-5706     TCGA-B0-5707 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5709     TCGA-B0-5710     TCGA-B0-5711     TCGA-B0-5713 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B0-5812     TCGA-B2-3924     TCGA-B2-4098     TCGA-B2-4099 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B2-4101     TCGA-B2-4102     TCGA-B2-5633     TCGA-B2-5635 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B2-5641     TCGA-B4-5377     TCGA-B8-4143     TCGA-B8-4146 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B8-4148     TCGA-B8-4151     TCGA-B8-4153     TCGA-B8-4154 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B8-4620     TCGA-B8-4621     TCGA-B8-4622     TCGA-B8-5158 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" 
    TCGA-B8-5159     TCGA-B8-5163     TCGA-B8-5164     TCGA-B8-5165 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B8-5545     TCGA-B8-5546     TCGA-B8-5549     TCGA-B8-5551 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-B8-5552     TCGA-BP-4161     TCGA-BP-4162     TCGA-BP-4163 
"PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4164     TCGA-BP-4167     TCGA-BP-4770     TCGA-BP-4782 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4801     TCGA-BP-4960     TCGA-BP-4961     TCGA-BP-4962 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4963     TCGA-BP-4964     TCGA-BP-4967     TCGA-BP-4968 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4970     TCGA-BP-4971     TCGA-BP-4972     TCGA-BP-4973 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4974     TCGA-BP-4975     TCGA-BP-4976     TCGA-BP-4977 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4981     TCGA-BP-4982     TCGA-BP-4983     TCGA-BP-4985 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4986     TCGA-BP-4987     TCGA-BP-4988     TCGA-BP-4989 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4991     TCGA-BP-4992     TCGA-BP-4993     TCGA-BP-4995 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-4998     TCGA-BP-4999     TCGA-BP-5000     TCGA-BP-5001 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-5004     TCGA-BP-5006     TCGA-BP-5007     TCGA-BP-5008 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-5009     TCGA-BP-5010     TCGA-BP-5168     TCGA-BP-5169 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-5170     TCGA-BP-5173     TCGA-BP-5174     TCGA-BP-5175 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-5176     TCGA-BP-5177     TCGA-BP-5178     TCGA-BP-5180 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-5182     TCGA-BP-5183     TCGA-BP-5184     TCGA-BP-5185 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-5186     TCGA-BP-5187     TCGA-BP-5189     TCGA-BP-5190 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-BP-5191     TCGA-BP-5192     TCGA-BP-5194     TCGA-BP-5195 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" 
    TCGA-BP-5196     TCGA-BP-5198     TCGA-BP-5199     TCGA-BP-5200 
"PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" 
    TCGA-BP-5201     TCGA-BP-5202     TCGA-CJ-4634     TCGA-CJ-4636 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-4637     TCGA-CJ-4638     TCGA-CJ-4639     TCGA-CJ-4640 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-4641     TCGA-CJ-4643     TCGA-CJ-4644     TCGA-CJ-4882 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-4897     TCGA-CJ-4899     TCGA-CJ-4901     TCGA-CJ-4902 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-4903     TCGA-CJ-4904     TCGA-CJ-4905     TCGA-CJ-4907 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-4908     TCGA-CJ-4912     TCGA-CJ-4913     TCGA-CJ-4916 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-4918     TCGA-CJ-4920     TCGA-CJ-4923     TCGA-CJ-5671 
"PTEN WILD-TYPE"   "PTEN MUTATED" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-5672     TCGA-CJ-5675     TCGA-CJ-5676     TCGA-CJ-5677 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-5678     TCGA-CJ-5679     TCGA-CJ-5680     TCGA-CJ-5681 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-5682     TCGA-CJ-5683     TCGA-CJ-5684     TCGA-CJ-5686 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-6027     TCGA-CJ-6028     TCGA-CJ-6030     TCGA-CJ-6031 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CJ-6032     TCGA-CJ-6033     TCGA-CW-5580     TCGA-CW-5581 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CW-5583     TCGA-CW-5584     TCGA-CW-5585     TCGA-CW-5588 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CW-5589     TCGA-CW-5591     TCGA-CW-6087     TCGA-CW-6090 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CW-6093     TCGA-CZ-4853     TCGA-CZ-4856     TCGA-CZ-4859 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CZ-4863     TCGA-CZ-4866     TCGA-CZ-5451     TCGA-CZ-5452 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CZ-5453     TCGA-CZ-5454     TCGA-CZ-5456     TCGA-CZ-5457 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CZ-5458     TCGA-CZ-5459     TCGA-CZ-5460     TCGA-CZ-5461 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CZ-5462     TCGA-CZ-5463     TCGA-CZ-5464     TCGA-CZ-5465 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CZ-5466     TCGA-CZ-5467     TCGA-CZ-5468     TCGA-CZ-5469 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CZ-5982     TCGA-CZ-5984     TCGA-CZ-5985     TCGA-CZ-5986 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CZ-5987     TCGA-CZ-5988     TCGA-CZ-5989     TCGA-EU-5904 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EU-5905     TCGA-EU-5906     TCGA-EU-5907 
"PTEN WILD-TYPE" "PTEN WILD-TYPE"   "PTEN MUTATED" 
[1] "hr=" "1.2"
D8V2, continuous
D8V3, binary
                cls
clus               0   1
  PTEN MUTATED     2   7
  PTEN WILD-TYPE 100 184
[1] "tbl2"
                cls
clus             [,1] [,2]
  PTEN MUTATED      2    7
  PTEN WILD-TYPE  100  184
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  FEMALE            2            100
  MALE              7            184
D8V4, continuous
[1] "Remove cluster labels:" "PTEN MUTATED"          
clus
  PTEN MUTATED PTEN WILD-TYPE 
             1             10 
    TCGA-AK-3430     TCGA-B4-5377     TCGA-CZ-4856     TCGA-CZ-5456 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-CZ-5457     TCGA-CZ-5465     TCGA-CZ-5469     TCGA-CZ-5982 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" "PTEN WILD-TYPE" 
    TCGA-EU-5904     TCGA-EU-5905 
"PTEN WILD-TYPE" "PTEN WILD-TYPE" 
D8V5, binary
                cls
clus               0   1
  PTEN MUTATED     9   0
  PTEN WILD-TYPE 245  39
[1] "tbl2"
                cls
clus             [,1] [,2]
  PTEN MUTATED      9    0
  PTEN WILD-TYPE  245   39
    clus
vv   PTEN MUTATED PTEN WILD-TYPE
  M0            9            245
  M1            0             39
                vv
clus              N0  N1  NX
  PTEN MUTATED     2   2   5
  PTEN WILD-TYPE 133   9 142
D8V6, multiclass
    clus
vv   PTEN MUTATED PTEN WILD-TYPE
  N0            2            133
  N1            2              9
  NX            5            142
D8V7, continuous
                vv
clus             STAGE I STAGE II STAGE III STAGE IV
  PTEN MUTATED         3        2         4        0
  PTEN WILD-TYPE     141       30        73       40
D8V8, multiclass
           clus
vv          PTEN MUTATED PTEN WILD-TYPE
  STAGE I              3            141
  STAGE II             2             30
  STAGE III            4             73
  STAGE IV             0             40

Clustering(9) Variable = EBPL MUTATION ANALYSIS
D9V1, survival
                sevent
clus2              0   1
  EBPL MUTATED     4   2
  EBPL WILD-TYPE 210  75
  EBPL MUTATED EBPL WILD-TYPE 
             6            285 
  EBPL MUTATED EBPL WILD-TYPE 
             2             75 
$`EBPL MUTATED`
TCGA-B0-4710 TCGA-B0-5075 TCGA-B8-5546 TCGA-CJ-4639 TCGA-CJ-4643 TCGA-CZ-5467 
        0.16        19.99         0.46        75.88        58.92         2.40 

$`EBPL WILD-TYPE`
TCGA-A3-3308 TCGA-A3-3311 TCGA-A3-3316 TCGA-A3-3317 TCGA-A3-3319 TCGA-A3-3320 
        0.53        39.12        49.08        49.02        37.15        49.58 
TCGA-A3-3322 TCGA-A3-3323 TCGA-A3-3324 TCGA-A3-3326 TCGA-A3-3346 TCGA-A3-3347 
       48.56        36.33        38.99        37.38         4.50        36.07 
TCGA-A3-3349 TCGA-A3-3351 TCGA-A3-3357 TCGA-A3-3358 TCGA-A3-3362 TCGA-A3-3363 
       45.53        29.92        46.85        42.97        51.25        10.49 
TCGA-A3-3365 TCGA-A3-3367 TCGA-A3-3370 TCGA-A3-3372 TCGA-A3-3373 TCGA-A3-3376 
       28.67        34.65        25.51        24.16        10.98        35.18 
TCGA-A3-3378 TCGA-A3-3380 TCGA-A3-3382 TCGA-A3-3383 TCGA-A3-3385 TCGA-A3-3387 
       20.71        18.64        18.87        28.31        23.87        20.25 
TCGA-AK-3429 TCGA-AK-3430 TCGA-AK-3436 TCGA-AK-3444 TCGA-AK-3451 TCGA-AK-3455 
       66.31        15.78        67.17        48.36        48.69        22.45 
TCGA-AK-3456 TCGA-AK-3458 TCGA-B0-4700 TCGA-B0-4706 TCGA-B0-4712 TCGA-B0-4810 
        1.51        38.40        65.06         0.85        43.96         8.75 
TCGA-B0-4811 TCGA-B0-4815 TCGA-B0-4816 TCGA-B0-4818 TCGA-B0-4823 TCGA-B0-4827 
       39.32        49.02        35.54        14.01        14.93        29.06 
TCGA-B0-4842 TCGA-B0-4852 TCGA-B0-4945 TCGA-B0-5077 TCGA-B0-5080 TCGA-B0-5081 
       53.79        35.47        70.52        42.44         7.30         7.66 
TCGA-B0-5085 TCGA-B0-5088 TCGA-B0-5092 TCGA-B0-5094 TCGA-B0-5095 TCGA-B0-5096 
       25.28        14.24        15.09        10.95         8.05         2.20 
TCGA-B0-5097 TCGA-B0-5099 TCGA-B0-5100 TCGA-B0-5102 TCGA-B0-5104 TCGA-B0-5106 
        4.96        15.95        62.89        90.84        90.44        52.50 
TCGA-B0-5107 TCGA-B0-5108 TCGA-B0-5109 TCGA-B0-5110 TCGA-B0-5113 TCGA-B0-5115 
       30.48         5.33        19.27        18.41         0.72         2.96 
TCGA-B0-5116 TCGA-B0-5119 TCGA-B0-5120 TCGA-B0-5121 TCGA-B0-5399 TCGA-B0-5400 
        3.39         1.58         1.81         6.12         6.25        22.26 
TCGA-B0-5402 TCGA-B0-5691 TCGA-B0-5692 TCGA-B0-5693 TCGA-B0-5694 TCGA-B0-5695 
        0.33        91.43        48.89        60.89        15.42        34.26 
TCGA-B0-5696 TCGA-B0-5697 TCGA-B0-5698 TCGA-B0-5699 TCGA-B0-5701 TCGA-B0-5702 
       31.04        37.32        71.70        79.73        41.95        38.07 
TCGA-B0-5703 TCGA-B0-5705 TCGA-B0-5706 TCGA-B0-5707 TCGA-B0-5709 TCGA-B0-5710 
        8.61       109.64        79.36        85.22        77.49        31.46 
TCGA-B0-5711 TCGA-B0-5713 TCGA-B0-5812 TCGA-B2-3924 TCGA-B2-4098 TCGA-B2-4099 
       83.93        61.28        76.41         6.38         1.64         3.62 
TCGA-B2-4101 TCGA-B2-4102 TCGA-B2-5633 TCGA-B2-5635 TCGA-B2-5641 TCGA-B4-5377 
        2.96         0.49         7.04        10.36         5.52         9.57 
TCGA-B8-4143 TCGA-B8-4146 TCGA-B8-4148 TCGA-B8-4151 TCGA-B8-4153 TCGA-B8-4154 
       23.31        16.80        12.46         9.17        13.28         8.38 
TCGA-B8-4620 TCGA-B8-4621 TCGA-B8-4622 TCGA-B8-5158 TCGA-B8-5159 TCGA-B8-5163 
        7.43         7.07         5.95         2.96         4.37         0.13 
TCGA-B8-5164 TCGA-B8-5165 TCGA-B8-5545 TCGA-B8-5549 TCGA-B8-5551 TCGA-B8-5552 
        0.76         0.26         8.15         6.38         0.49         7.20 
TCGA-BP-4161 TCGA-BP-4162 TCGA-BP-4163 TCGA-BP-4164 TCGA-BP-4167 TCGA-BP-4770 
       90.28       101.06        93.34        32.61        89.36        10.82 
TCGA-BP-4782 TCGA-BP-4801 TCGA-BP-4960 TCGA-BP-4961 TCGA-BP-4962 TCGA-BP-4963 
       11.64        36.95        71.41        63.62        58.68        60.30 
TCGA-BP-4964 TCGA-BP-4967 TCGA-BP-4968 TCGA-BP-4970 TCGA-BP-4971 TCGA-BP-4972 
       61.22         6.71        57.37        14.20        48.89        49.35 
TCGA-BP-4973 TCGA-BP-4974 TCGA-BP-4975 TCGA-BP-4976 TCGA-BP-4977 TCGA-BP-4981 
       45.50         7.23        47.11        53.65        14.93        36.07 
TCGA-BP-4982 TCGA-BP-4983 TCGA-BP-4985 TCGA-BP-4986 TCGA-BP-4987 TCGA-BP-4988 
       33.30        46.42        31.27        25.81        36.95        27.19 
TCGA-BP-4989 TCGA-BP-4991 TCGA-BP-4992 TCGA-BP-4993 TCGA-BP-4995 TCGA-BP-4998 
        3.85        34.32        16.44         5.79        45.07        30.61 
TCGA-BP-4999 TCGA-BP-5000 TCGA-BP-5001 TCGA-BP-5004 TCGA-BP-5006 TCGA-BP-5007 
       41.62        18.51        38.70        37.02        27.62        37.48 
TCGA-BP-5008 TCGA-BP-5009 TCGA-BP-5010 TCGA-BP-5168 TCGA-BP-5169 TCGA-BP-5170 
       35.21        35.90        28.83        48.10         6.31        79.27 
TCGA-BP-5173 TCGA-BP-5174 TCGA-BP-5175 TCGA-BP-5176 TCGA-BP-5177 TCGA-BP-5178 
        1.78        74.20        30.64        52.27         9.63        62.86 
TCGA-BP-5180 TCGA-BP-5182 TCGA-BP-5183 TCGA-BP-5184 TCGA-BP-5185 TCGA-BP-5186 
       62.20        38.30        36.23        37.25        37.22        22.78 
TCGA-BP-5187 TCGA-BP-5189 TCGA-BP-5190 TCGA-BP-5191 TCGA-BP-5192 TCGA-BP-5194 
       13.35        27.02        33.21        31.76        23.47        13.41 
TCGA-BP-5195 TCGA-BP-5196 TCGA-BP-5198 TCGA-BP-5199 TCGA-BP-5200 TCGA-BP-5201 
       24.59        33.47        19.82        44.52        28.96        31.27 
TCGA-BP-5202 TCGA-CJ-4634 TCGA-CJ-4636 TCGA-CJ-4637 TCGA-CJ-4638 TCGA-CJ-4640 
        0.95        59.84        63.25        73.22        14.17        65.69 
TCGA-CJ-4641 TCGA-CJ-4644 TCGA-CJ-4882 TCGA-CJ-4897 TCGA-CJ-4899 TCGA-CJ-4901 
       54.61        11.05        61.91        59.44        50.20        47.67 
TCGA-CJ-4902 TCGA-CJ-4903 TCGA-CJ-4904 TCGA-CJ-4905 TCGA-CJ-4907 TCGA-CJ-4908 
       49.94        51.25        58.92        49.15        49.25        50.30 
TCGA-CJ-4912 TCGA-CJ-4913 TCGA-CJ-4916 TCGA-CJ-4918 TCGA-CJ-4920 TCGA-CJ-4923 
       54.44        38.56        45.11         3.02         4.57        18.81 
TCGA-CJ-5671 TCGA-CJ-5672 TCGA-CJ-5675 TCGA-CJ-5676 TCGA-CJ-5677 TCGA-CJ-5678 
       63.85        72.00        79.86        84.66        25.71        18.84 
TCGA-CJ-5679 TCGA-CJ-5680 TCGA-CJ-5681 TCGA-CJ-5682 TCGA-CJ-5683 TCGA-CJ-5684 
       22.29        25.25        18.12        61.91        62.10        73.32 
TCGA-CJ-5686 TCGA-CJ-6027 TCGA-CJ-6028 TCGA-CJ-6030 TCGA-CJ-6031 TCGA-CJ-6032 
       67.00        60.99        53.42        75.55        62.63        83.77 
TCGA-CJ-6033 TCGA-CW-5580 TCGA-CW-5581 TCGA-CW-5583 TCGA-CW-5584 TCGA-CW-5585 
        7.36        64.57        92.02        81.83         5.39        85.78 
TCGA-CW-5588 TCGA-CW-5589 TCGA-CW-5591 TCGA-CW-6087 TCGA-CW-6090 TCGA-CW-6093 
       66.28        78.15        74.63         1.35        75.88        79.89 
TCGA-CZ-4853 TCGA-CZ-4856 TCGA-CZ-4859 TCGA-CZ-4863 TCGA-CZ-4866 TCGA-CZ-5451 
       25.45         0.59        58.75        55.56        58.13        54.84 
TCGA-CZ-5452 TCGA-CZ-5453 TCGA-CZ-5454 TCGA-CZ-5456 TCGA-CZ-5457 TCGA-CZ-5458 
       51.16         0.82        23.74        51.22        50.86        51.22 
TCGA-CZ-5459 TCGA-CZ-5460 TCGA-CZ-5461 TCGA-CZ-5462 TCGA-CZ-5463 TCGA-CZ-5464 
       49.81        47.01        10.85        10.22        21.76        49.05 
TCGA-CZ-5465 TCGA-CZ-5466 TCGA-CZ-5468 TCGA-CZ-5469 TCGA-CZ-5982 TCGA-CZ-5984 
       45.27        22.52         1.94        31.07        67.13        49.02 
TCGA-CZ-5985 TCGA-CZ-5986 TCGA-CZ-5987 TCGA-CZ-5988 TCGA-CZ-5989 TCGA-EU-5904 
       53.56        12.26        14.30        22.78        52.57        18.08 
TCGA-EU-5905 TCGA-EU-5906 TCGA-EU-5907 
        3.88         6.77         4.14 

  EBPL MUTATED EBPL WILD-TYPE 
          0.16           0.13 
  EBPL MUTATED EBPL WILD-TYPE 
         75.88         109.64 
  EBPL MUTATED EBPL WILD-TYPE 
        11.195         34.320 
[1] "0.2 - 75.9 (11.2)"  "0.1 - 109.6 (34.3)"
    TCGA-A3-3308     TCGA-A3-3311     TCGA-A3-3316     TCGA-A3-3317 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3319     TCGA-A3-3320     TCGA-A3-3322     TCGA-A3-3323 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3324     TCGA-A3-3326     TCGA-A3-3346     TCGA-A3-3347 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3349     TCGA-A3-3351     TCGA-A3-3357     TCGA-A3-3358 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3362     TCGA-A3-3363     TCGA-A3-3365     TCGA-A3-3367 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3370     TCGA-A3-3372     TCGA-A3-3373     TCGA-A3-3376 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3378     TCGA-A3-3380     TCGA-A3-3382     TCGA-A3-3383 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3385     TCGA-A3-3387     TCGA-AK-3429     TCGA-AK-3430 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-AK-3436     TCGA-AK-3444     TCGA-AK-3451     TCGA-AK-3455 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-AK-3456     TCGA-AK-3458     TCGA-B0-4700     TCGA-B0-4706 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-4710     TCGA-B0-4712     TCGA-B0-4810     TCGA-B0-4811 
  "EBPL MUTATED" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-4815     TCGA-B0-4816     TCGA-B0-4818     TCGA-B0-4823 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-4827     TCGA-B0-4842     TCGA-B0-4852     TCGA-B0-4945 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5075     TCGA-B0-5077     TCGA-B0-5080     TCGA-B0-5081 
  "EBPL MUTATED" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5085     TCGA-B0-5088     TCGA-B0-5092     TCGA-B0-5094 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5095     TCGA-B0-5096     TCGA-B0-5097     TCGA-B0-5099 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5100     TCGA-B0-5102     TCGA-B0-5104     TCGA-B0-5106 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5107     TCGA-B0-5108     TCGA-B0-5109     TCGA-B0-5110 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5113     TCGA-B0-5115     TCGA-B0-5116     TCGA-B0-5119 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5120     TCGA-B0-5121     TCGA-B0-5399     TCGA-B0-5400 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5402     TCGA-B0-5691     TCGA-B0-5692     TCGA-B0-5693 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5694     TCGA-B0-5695     TCGA-B0-5696     TCGA-B0-5697 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5698     TCGA-B0-5699     TCGA-B0-5701     TCGA-B0-5702 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5703     TCGA-B0-5705     TCGA-B0-5706     TCGA-B0-5707 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5709     TCGA-B0-5710     TCGA-B0-5711     TCGA-B0-5713 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5812     TCGA-B2-3924     TCGA-B2-4098     TCGA-B2-4099 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B2-4101     TCGA-B2-4102     TCGA-B2-5633     TCGA-B2-5635 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B2-5641     TCGA-B4-5377     TCGA-B8-4143     TCGA-B8-4146 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B8-4148     TCGA-B8-4151     TCGA-B8-4153     TCGA-B8-4154 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B8-4620     TCGA-B8-4621     TCGA-B8-4622     TCGA-B8-5158 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B8-5159     TCGA-B8-5163     TCGA-B8-5164     TCGA-B8-5165 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B8-5545     TCGA-B8-5546     TCGA-B8-5549     TCGA-B8-5551 
"EBPL WILD-TYPE"   "EBPL MUTATED" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B8-5552     TCGA-BP-4161     TCGA-BP-4162     TCGA-BP-4163 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4164     TCGA-BP-4167     TCGA-BP-4770     TCGA-BP-4782 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4801     TCGA-BP-4960     TCGA-BP-4961     TCGA-BP-4962 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4963     TCGA-BP-4964     TCGA-BP-4967     TCGA-BP-4968 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4970     TCGA-BP-4971     TCGA-BP-4972     TCGA-BP-4973 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4974     TCGA-BP-4975     TCGA-BP-4976     TCGA-BP-4977 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4981     TCGA-BP-4982     TCGA-BP-4983     TCGA-BP-4985 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4986     TCGA-BP-4987     TCGA-BP-4988     TCGA-BP-4989 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4991     TCGA-BP-4992     TCGA-BP-4993     TCGA-BP-4995 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4998     TCGA-BP-4999     TCGA-BP-5000     TCGA-BP-5001 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5004     TCGA-BP-5006     TCGA-BP-5007     TCGA-BP-5008 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5009     TCGA-BP-5010     TCGA-BP-5168     TCGA-BP-5169 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5170     TCGA-BP-5173     TCGA-BP-5174     TCGA-BP-5175 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5176     TCGA-BP-5177     TCGA-BP-5178     TCGA-BP-5180 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5182     TCGA-BP-5183     TCGA-BP-5184     TCGA-BP-5185 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5186     TCGA-BP-5187     TCGA-BP-5189     TCGA-BP-5190 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5191     TCGA-BP-5192     TCGA-BP-5194     TCGA-BP-5195 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5196     TCGA-BP-5198     TCGA-BP-5199     TCGA-BP-5200 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5201     TCGA-BP-5202     TCGA-CJ-4634     TCGA-CJ-4636 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-4637     TCGA-CJ-4638     TCGA-CJ-4639     TCGA-CJ-4640 
"EBPL WILD-TYPE" "EBPL WILD-TYPE"   "EBPL MUTATED" "EBPL WILD-TYPE" 
    TCGA-CJ-4641     TCGA-CJ-4643     TCGA-CJ-4644     TCGA-CJ-4882 
"EBPL WILD-TYPE"   "EBPL MUTATED" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-4897     TCGA-CJ-4899     TCGA-CJ-4901     TCGA-CJ-4902 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-4903     TCGA-CJ-4904     TCGA-CJ-4905     TCGA-CJ-4907 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-4908     TCGA-CJ-4912     TCGA-CJ-4913     TCGA-CJ-4916 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-4918     TCGA-CJ-4920     TCGA-CJ-4923     TCGA-CJ-5671 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-5672     TCGA-CJ-5675     TCGA-CJ-5676     TCGA-CJ-5677 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-5678     TCGA-CJ-5679     TCGA-CJ-5680     TCGA-CJ-5681 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-5682     TCGA-CJ-5683     TCGA-CJ-5684     TCGA-CJ-5686 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-6027     TCGA-CJ-6028     TCGA-CJ-6030     TCGA-CJ-6031 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-6032     TCGA-CJ-6033     TCGA-CW-5580     TCGA-CW-5581 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CW-5583     TCGA-CW-5584     TCGA-CW-5585     TCGA-CW-5588 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CW-5589     TCGA-CW-5591     TCGA-CW-6087     TCGA-CW-6090 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CW-6093     TCGA-CZ-4853     TCGA-CZ-4856     TCGA-CZ-4859 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CZ-4863     TCGA-CZ-4866     TCGA-CZ-5451     TCGA-CZ-5452 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CZ-5453     TCGA-CZ-5454     TCGA-CZ-5456     TCGA-CZ-5457 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CZ-5458     TCGA-CZ-5459     TCGA-CZ-5460     TCGA-CZ-5461 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CZ-5462     TCGA-CZ-5463     TCGA-CZ-5464     TCGA-CZ-5465 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CZ-5466     TCGA-CZ-5467     TCGA-CZ-5468     TCGA-CZ-5469 
"EBPL WILD-TYPE"   "EBPL MUTATED" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CZ-5982     TCGA-CZ-5984     TCGA-CZ-5985     TCGA-CZ-5986 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CZ-5987     TCGA-CZ-5988     TCGA-CZ-5989     TCGA-EU-5904 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-EU-5905     TCGA-EU-5906     TCGA-EU-5907 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3308     TCGA-A3-3311     TCGA-A3-3316     TCGA-A3-3317 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3319     TCGA-A3-3320     TCGA-A3-3322     TCGA-A3-3323 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3324     TCGA-A3-3326     TCGA-A3-3346     TCGA-A3-3347 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3349     TCGA-A3-3351     TCGA-A3-3357     TCGA-A3-3358 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3362     TCGA-A3-3363     TCGA-A3-3365     TCGA-A3-3367 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3370     TCGA-A3-3372     TCGA-A3-3373     TCGA-A3-3376 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3378     TCGA-A3-3380     TCGA-A3-3382     TCGA-A3-3383 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3385     TCGA-A3-3387     TCGA-AK-3429     TCGA-AK-3430 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-AK-3436     TCGA-AK-3444     TCGA-AK-3451     TCGA-AK-3455 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-AK-3456     TCGA-AK-3458     TCGA-B0-4700     TCGA-B0-4706 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-4710     TCGA-B0-4712     TCGA-B0-4810     TCGA-B0-4811 
  "EBPL MUTATED" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-4815     TCGA-B0-4816     TCGA-B0-4818     TCGA-B0-4823 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-4827     TCGA-B0-4842     TCGA-B0-4852     TCGA-B0-4945 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5075     TCGA-B0-5077     TCGA-B0-5080     TCGA-B0-5081 
  "EBPL MUTATED" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5085     TCGA-B0-5088     TCGA-B0-5092     TCGA-B0-5094 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5095     TCGA-B0-5096     TCGA-B0-5097     TCGA-B0-5099 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5100     TCGA-B0-5102     TCGA-B0-5104     TCGA-B0-5106 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5107     TCGA-B0-5108     TCGA-B0-5109     TCGA-B0-5110 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5113     TCGA-B0-5115     TCGA-B0-5116     TCGA-B0-5119 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5120     TCGA-B0-5121     TCGA-B0-5399     TCGA-B0-5400 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5402     TCGA-B0-5691     TCGA-B0-5692     TCGA-B0-5693 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5694     TCGA-B0-5695     TCGA-B0-5696     TCGA-B0-5697 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5698     TCGA-B0-5699     TCGA-B0-5701     TCGA-B0-5702 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5703     TCGA-B0-5705     TCGA-B0-5706     TCGA-B0-5707 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5709     TCGA-B0-5710     TCGA-B0-5711     TCGA-B0-5713 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5812     TCGA-B2-3924     TCGA-B2-4098     TCGA-B2-4099 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B2-4101     TCGA-B2-4102     TCGA-B2-5633     TCGA-B2-5635 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B2-5641     TCGA-B4-5377     TCGA-B8-4143     TCGA-B8-4146 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B8-4148     TCGA-B8-4151     TCGA-B8-4153     TCGA-B8-4154 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B8-4620     TCGA-B8-4621     TCGA-B8-4622     TCGA-B8-5158 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B8-5159     TCGA-B8-5163     TCGA-B8-5164     TCGA-B8-5165 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B8-5545     TCGA-B8-5546     TCGA-B8-5549     TCGA-B8-5551 
"EBPL WILD-TYPE"   "EBPL MUTATED" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B8-5552     TCGA-BP-4161     TCGA-BP-4162     TCGA-BP-4163 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4164     TCGA-BP-4167     TCGA-BP-4770     TCGA-BP-4782 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4801     TCGA-BP-4960     TCGA-BP-4961     TCGA-BP-4962 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4963     TCGA-BP-4964     TCGA-BP-4967     TCGA-BP-4968 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4970     TCGA-BP-4971     TCGA-BP-4972     TCGA-BP-4973 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4974     TCGA-BP-4975     TCGA-BP-4976     TCGA-BP-4977 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4981     TCGA-BP-4982     TCGA-BP-4983     TCGA-BP-4985 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4986     TCGA-BP-4987     TCGA-BP-4988     TCGA-BP-4989 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4991     TCGA-BP-4992     TCGA-BP-4993     TCGA-BP-4995 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4998     TCGA-BP-4999     TCGA-BP-5000     TCGA-BP-5001 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5004     TCGA-BP-5006     TCGA-BP-5007     TCGA-BP-5008 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5009     TCGA-BP-5010     TCGA-BP-5168     TCGA-BP-5169 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5170     TCGA-BP-5173     TCGA-BP-5174     TCGA-BP-5175 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5176     TCGA-BP-5177     TCGA-BP-5178     TCGA-BP-5180 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5182     TCGA-BP-5183     TCGA-BP-5184     TCGA-BP-5185 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5186     TCGA-BP-5187     TCGA-BP-5189     TCGA-BP-5190 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5191     TCGA-BP-5192     TCGA-BP-5194     TCGA-BP-5195 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5196     TCGA-BP-5198     TCGA-BP-5199     TCGA-BP-5200 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5201     TCGA-BP-5202     TCGA-CJ-4634     TCGA-CJ-4636 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-4637     TCGA-CJ-4638     TCGA-CJ-4639     TCGA-CJ-4640 
"EBPL WILD-TYPE" "EBPL WILD-TYPE"   "EBPL MUTATED" "EBPL WILD-TYPE" 
    TCGA-CJ-4641     TCGA-CJ-4643     TCGA-CJ-4644     TCGA-CJ-4882 
"EBPL WILD-TYPE"   "EBPL MUTATED" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-4897     TCGA-CJ-4899     TCGA-CJ-4901     TCGA-CJ-4902 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-4903     TCGA-CJ-4904     TCGA-CJ-4905     TCGA-CJ-4907 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-4908     TCGA-CJ-4912     TCGA-CJ-4913     TCGA-CJ-4916 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-4918     TCGA-CJ-4920     TCGA-CJ-4923     TCGA-CJ-5671 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-5672     TCGA-CJ-5675     TCGA-CJ-5676     TCGA-CJ-5677 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-5678     TCGA-CJ-5679     TCGA-CJ-5680     TCGA-CJ-5681 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-5682     TCGA-CJ-5683     TCGA-CJ-5684     TCGA-CJ-5686 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-6027     TCGA-CJ-6028     TCGA-CJ-6030     TCGA-CJ-6031 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-6032     TCGA-CJ-6033     TCGA-CW-5580     TCGA-CW-5581 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CW-5583     TCGA-CW-5584     TCGA-CW-5585     TCGA-CW-5588 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CW-5589     TCGA-CW-5591     TCGA-CW-6087     TCGA-CW-6090 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CW-6093     TCGA-CZ-4853     TCGA-CZ-4856     TCGA-CZ-4859 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CZ-4863     TCGA-CZ-4866     TCGA-CZ-5451     TCGA-CZ-5452 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CZ-5453     TCGA-CZ-5454     TCGA-CZ-5456     TCGA-CZ-5457 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CZ-5458     TCGA-CZ-5459     TCGA-CZ-5460     TCGA-CZ-5461 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CZ-5462     TCGA-CZ-5463     TCGA-CZ-5464     TCGA-CZ-5465 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CZ-5466     TCGA-CZ-5467     TCGA-CZ-5468     TCGA-CZ-5469 
"EBPL WILD-TYPE"   "EBPL MUTATED" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CZ-5982     TCGA-CZ-5984     TCGA-CZ-5985     TCGA-CZ-5986 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CZ-5987     TCGA-CZ-5988     TCGA-CZ-5989     TCGA-EU-5904 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-EU-5905     TCGA-EU-5906     TCGA-EU-5907 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3308     TCGA-A3-3311     TCGA-A3-3316     TCGA-A3-3317 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3319     TCGA-A3-3320     TCGA-A3-3322     TCGA-A3-3323 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3324     TCGA-A3-3326     TCGA-A3-3346     TCGA-A3-3347 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3349     TCGA-A3-3351     TCGA-A3-3357     TCGA-A3-3358 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3362     TCGA-A3-3363     TCGA-A3-3365     TCGA-A3-3367 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3370     TCGA-A3-3372     TCGA-A3-3373     TCGA-A3-3376 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3378     TCGA-A3-3380     TCGA-A3-3382     TCGA-A3-3383 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-A3-3385     TCGA-A3-3387     TCGA-AK-3429     TCGA-AK-3430 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-AK-3436     TCGA-AK-3444     TCGA-AK-3451     TCGA-AK-3455 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-AK-3456     TCGA-AK-3458     TCGA-B0-4700     TCGA-B0-4706 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-4710     TCGA-B0-4712     TCGA-B0-4810     TCGA-B0-4811 
  "EBPL MUTATED" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-4815     TCGA-B0-4816     TCGA-B0-4818     TCGA-B0-4823 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-4827     TCGA-B0-4842     TCGA-B0-4852     TCGA-B0-4945 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5075     TCGA-B0-5077     TCGA-B0-5080     TCGA-B0-5081 
  "EBPL MUTATED" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5085     TCGA-B0-5088     TCGA-B0-5092     TCGA-B0-5094 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5095     TCGA-B0-5096     TCGA-B0-5097     TCGA-B0-5099 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5100     TCGA-B0-5102     TCGA-B0-5104     TCGA-B0-5106 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5107     TCGA-B0-5108     TCGA-B0-5109     TCGA-B0-5110 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5113     TCGA-B0-5115     TCGA-B0-5116     TCGA-B0-5119 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5120     TCGA-B0-5121     TCGA-B0-5399     TCGA-B0-5400 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5402     TCGA-B0-5691     TCGA-B0-5692     TCGA-B0-5693 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5694     TCGA-B0-5695     TCGA-B0-5696     TCGA-B0-5697 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5698     TCGA-B0-5699     TCGA-B0-5701     TCGA-B0-5702 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5703     TCGA-B0-5705     TCGA-B0-5706     TCGA-B0-5707 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5709     TCGA-B0-5710     TCGA-B0-5711     TCGA-B0-5713 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B0-5812     TCGA-B2-3924     TCGA-B2-4098     TCGA-B2-4099 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B2-4101     TCGA-B2-4102     TCGA-B2-5633     TCGA-B2-5635 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B2-5641     TCGA-B4-5377     TCGA-B8-4143     TCGA-B8-4146 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B8-4148     TCGA-B8-4151     TCGA-B8-4153     TCGA-B8-4154 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B8-4620     TCGA-B8-4621     TCGA-B8-4622     TCGA-B8-5158 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B8-5159     TCGA-B8-5163     TCGA-B8-5164     TCGA-B8-5165 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B8-5545     TCGA-B8-5546     TCGA-B8-5549     TCGA-B8-5551 
"EBPL WILD-TYPE"   "EBPL MUTATED" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-B8-5552     TCGA-BP-4161     TCGA-BP-4162     TCGA-BP-4163 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4164     TCGA-BP-4167     TCGA-BP-4770     TCGA-BP-4782 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4801     TCGA-BP-4960     TCGA-BP-4961     TCGA-BP-4962 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4963     TCGA-BP-4964     TCGA-BP-4967     TCGA-BP-4968 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4970     TCGA-BP-4971     TCGA-BP-4972     TCGA-BP-4973 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4974     TCGA-BP-4975     TCGA-BP-4976     TCGA-BP-4977 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4981     TCGA-BP-4982     TCGA-BP-4983     TCGA-BP-4985 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4986     TCGA-BP-4987     TCGA-BP-4988     TCGA-BP-4989 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4991     TCGA-BP-4992     TCGA-BP-4993     TCGA-BP-4995 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-4998     TCGA-BP-4999     TCGA-BP-5000     TCGA-BP-5001 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5004     TCGA-BP-5006     TCGA-BP-5007     TCGA-BP-5008 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5009     TCGA-BP-5010     TCGA-BP-5168     TCGA-BP-5169 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5170     TCGA-BP-5173     TCGA-BP-5174     TCGA-BP-5175 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5176     TCGA-BP-5177     TCGA-BP-5178     TCGA-BP-5180 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5182     TCGA-BP-5183     TCGA-BP-5184     TCGA-BP-5185 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5186     TCGA-BP-5187     TCGA-BP-5189     TCGA-BP-5190 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5191     TCGA-BP-5192     TCGA-BP-5194     TCGA-BP-5195 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5196     TCGA-BP-5198     TCGA-BP-5199     TCGA-BP-5200 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-BP-5201     TCGA-BP-5202     TCGA-CJ-4634     TCGA-CJ-4636 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-4637     TCGA-CJ-4638     TCGA-CJ-4639     TCGA-CJ-4640 
"EBPL WILD-TYPE" "EBPL WILD-TYPE"   "EBPL MUTATED" "EBPL WILD-TYPE" 
    TCGA-CJ-4641     TCGA-CJ-4643     TCGA-CJ-4644     TCGA-CJ-4882 
"EBPL WILD-TYPE"   "EBPL MUTATED" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-4897     TCGA-CJ-4899     TCGA-CJ-4901     TCGA-CJ-4902 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-4903     TCGA-CJ-4904     TCGA-CJ-4905     TCGA-CJ-4907 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-4908     TCGA-CJ-4912     TCGA-CJ-4913     TCGA-CJ-4916 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-4918     TCGA-CJ-4920     TCGA-CJ-4923     TCGA-CJ-5671 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-5672     TCGA-CJ-5675     TCGA-CJ-5676     TCGA-CJ-5677 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-5678     TCGA-CJ-5679     TCGA-CJ-5680     TCGA-CJ-5681 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-5682     TCGA-CJ-5683     TCGA-CJ-5684     TCGA-CJ-5686 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-6027     TCGA-CJ-6028     TCGA-CJ-6030     TCGA-CJ-6031 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CJ-6032     TCGA-CJ-6033     TCGA-CW-5580     TCGA-CW-5581 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CW-5583     TCGA-CW-5584     TCGA-CW-5585     TCGA-CW-5588 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CW-5589     TCGA-CW-5591     TCGA-CW-6087     TCGA-CW-6090 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CW-6093     TCGA-CZ-4853     TCGA-CZ-4856     TCGA-CZ-4859 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CZ-4863     TCGA-CZ-4866     TCGA-CZ-5451     TCGA-CZ-5452 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CZ-5453     TCGA-CZ-5454     TCGA-CZ-5456     TCGA-CZ-5457 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CZ-5458     TCGA-CZ-5459     TCGA-CZ-5460     TCGA-CZ-5461 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CZ-5462     TCGA-CZ-5463     TCGA-CZ-5464     TCGA-CZ-5465 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CZ-5466     TCGA-CZ-5467     TCGA-CZ-5468     TCGA-CZ-5469 
"EBPL WILD-TYPE"   "EBPL MUTATED" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CZ-5982     TCGA-CZ-5984     TCGA-CZ-5985     TCGA-CZ-5986 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-CZ-5987     TCGA-CZ-5988     TCGA-CZ-5989     TCGA-EU-5904 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
    TCGA-EU-5905     TCGA-EU-5906     TCGA-EU-5907 
"EBPL WILD-TYPE" "EBPL WILD-TYPE" "EBPL WILD-TYPE" 
[1] "hr=" "1.7"
D9V2, continuous
D9V3, binary
                cls
clus               0   1
  EBPL MUTATED     6   0
  EBPL WILD-TYPE  96 191
[1] "tbl2"
                cls
clus             [,1] [,2]
  EBPL MUTATED      6    0
  EBPL WILD-TYPE   96  191
        clus
vv       EBPL MUTATED EBPL WILD-TYPE
  FEMALE            6             96
  MALE              0            191
D9V4, continuous
D9V5, binary
                cls
clus               0   1
  EBPL MUTATED     6   0
  EBPL WILD-TYPE 248  39
[1] "tbl2"
                cls
clus             [,1] [,2]
  EBPL MUTATED      6    0
  EBPL WILD-TYPE  248   39
    clus
vv   EBPL MUTATED EBPL WILD-TYPE
  M0            6            248
  M1            0             39
                vv
clus              N0  N1  NX
  EBPL MUTATED     6   0   0
  EBPL WILD-TYPE 129  11 147
D9V6, multiclass
    clus
vv   EBPL MUTATED EBPL WILD-TYPE
  N0            6            129
  N1            0             11
  NX            0            147
D9V7, continuous
                vv
clus             STAGE I STAGE II STAGE III STAGE IV
  EBPL MUTATED         1        2         3        0
  EBPL WILD-TYPE     143       30        74       40
D9V8, multiclass
           clus
vv          EBPL MUTATED EBPL WILD-TYPE
  STAGE I              1            143
  STAGE II             2             30
  STAGE III            3             74
  STAGE IV             0             40

Clustering(10) Variable = TOR1A MUTATION ANALYSIS
D10V1, survival
                 sevent
clus2               0   1
  TOR1A MUTATED     1   2
  TOR1A WILD-TYPE 213  75
  TOR1A MUTATED TOR1A WILD-TYPE 
              3             288 
  TOR1A MUTATED TOR1A WILD-TYPE 
              2              75 
$`TOR1A MUTATED`
TCGA-A3-3365 TCGA-B0-5096 TCGA-BP-5168 
       28.67         2.20        48.10 

$`TOR1A WILD-TYPE`
TCGA-A3-3308 TCGA-A3-3311 TCGA-A3-3316 TCGA-A3-3317 TCGA-A3-3319 TCGA-A3-3320 
        0.53        39.12        49.08        49.02        37.15        49.58 
TCGA-A3-3322 TCGA-A3-3323 TCGA-A3-3324 TCGA-A3-3326 TCGA-A3-3346 TCGA-A3-3347 
       48.56        36.33        38.99        37.38         4.50        36.07 
TCGA-A3-3349 TCGA-A3-3351 TCGA-A3-3357 TCGA-A3-3358 TCGA-A3-3362 TCGA-A3-3363 
       45.53        29.92        46.85        42.97        51.25        10.49 
TCGA-A3-3367 TCGA-A3-3370 TCGA-A3-3372 TCGA-A3-3373 TCGA-A3-3376 TCGA-A3-3378 
       34.65        25.51        24.16        10.98        35.18        20.71 
TCGA-A3-3380 TCGA-A3-3382 TCGA-A3-3383 TCGA-A3-3385 TCGA-A3-3387 TCGA-AK-3429 
       18.64        18.87        28.31        23.87        20.25        66.31 
TCGA-AK-3430 TCGA-AK-3436 TCGA-AK-3444 TCGA-AK-3451 TCGA-AK-3455 TCGA-AK-3456 
       15.78        67.17        48.36        48.69        22.45         1.51 
TCGA-AK-3458 TCGA-B0-4700 TCGA-B0-4706 TCGA-B0-4710 TCGA-B0-4712 TCGA-B0-4810 
       38.40        65.06         0.85         0.16        43.96         8.75 
TCGA-B0-4811 TCGA-B0-4815 TCGA-B0-4816 TCGA-B0-4818 TCGA-B0-4823 TCGA-B0-4827 
       39.32        49.02        35.54        14.01        14.93        29.06 
TCGA-B0-4842 TCGA-B0-4852 TCGA-B0-4945 TCGA-B0-5075 TCGA-B0-5077 TCGA-B0-5080 
       53.79        35.47        70.52        19.99        42.44         7.30 
TCGA-B0-5081 TCGA-B0-5085 TCGA-B0-5088 TCGA-B0-5092 TCGA-B0-5094 TCGA-B0-5095 
        7.66        25.28        14.24        15.09        10.95         8.05 
TCGA-B0-5097 TCGA-B0-5099 TCGA-B0-5100 TCGA-B0-5102 TCGA-B0-5104 TCGA-B0-5106 
        4.96        15.95        62.89        90.84        90.44        52.50 
TCGA-B0-5107 TCGA-B0-5108 TCGA-B0-5109 TCGA-B0-5110 TCGA-B0-5113 TCGA-B0-5115 
       30.48         5.33        19.27        18.41         0.72         2.96 
TCGA-B0-5116 TCGA-B0-5119 TCGA-B0-5120 TCGA-B0-5121 TCGA-B0-5399 TCGA-B0-5400 
        3.39         1.58         1.81         6.12         6.25        22.26 
TCGA-B0-5402 TCGA-B0-5691 TCGA-B0-5692 TCGA-B0-5693 TCGA-B0-5694 TCGA-B0-5695 
        0.33        91.43        48.89        60.89        15.42        34.26 
TCGA-B0-5696 TCGA-B0-5697 TCGA-B0-5698 TCGA-B0-5699 TCGA-B0-5701 TCGA-B0-5702 
       31.04        37.32        71.70        79.73        41.95        38.07 
TCGA-B0-5703 TCGA-B0-5705 TCGA-B0-5706 TCGA-B0-5707 TCGA-B0-5709 TCGA-B0-5710 
        8.61       109.64        79.36        85.22        77.49        31.46 
TCGA-B0-5711 TCGA-B0-5713 TCGA-B0-5812 TCGA-B2-3924 TCGA-B2-4098 TCGA-B2-4099 
       83.93        61.28        76.41         6.38         1.64         3.62 
TCGA-B2-4101 TCGA-B2-4102 TCGA-B2-5633 TCGA-B2-5635 TCGA-B2-5641 TCGA-B4-5377 
        2.96         0.49         7.04        10.36         5.52         9.57 
TCGA-B8-4143 TCGA-B8-4146 TCGA-B8-4148 TCGA-B8-4151 TCGA-B8-4153 TCGA-B8-4154 
       23.31        16.80        12.46         9.17        13.28         8.38 
TCGA-B8-4620 TCGA-B8-4621 TCGA-B8-4622 TCGA-B8-5158 TCGA-B8-5159 TCGA-B8-5163 
        7.43         7.07         5.95         2.96         4.37         0.13 
TCGA-B8-5164 TCGA-B8-5165 TCGA-B8-5545 TCGA-B8-5546 TCGA-B8-5549 TCGA-B8-5551 
        0.76         0.26         8.15         0.46         6.38         0.49 
TCGA-B8-5552 TCGA-BP-4161 TCGA-BP-4162 TCGA-BP-4163 TCGA-BP-4164 TCGA-BP-4167 
        7.20        90.28       101.06        93.34        32.61        89.36 
TCGA-BP-4770 TCGA-BP-4782 TCGA-BP-4801 TCGA-BP-4960 TCGA-BP-4961 TCGA-BP-4962 
       10.82        11.64        36.95        71.41        63.62        58.68 
TCGA-BP-4963 TCGA-BP-4964 TCGA-BP-4967 TCGA-BP-4968 TCGA-BP-4970 TCGA-BP-4971 
       60.30        61.22         6.71        57.37        14.20        48.89 
TCGA-BP-4972 TCGA-BP-4973 TCGA-BP-4974 TCGA-BP-4975 TCGA-BP-4976 TCGA-BP-4977 
       49.35        45.50         7.23        47.11        53.65        14.93 
TCGA-BP-4981 TCGA-BP-4982 TCGA-BP-4983 TCGA-BP-4985 TCGA-BP-4986 TCGA-BP-4987 
       36.07        33.30        46.42        31.27        25.81        36.95 
TCGA-BP-4988 TCGA-BP-4989 TCGA-BP-4991 TCGA-BP-4992 TCGA-BP-4993 TCGA-BP-4995 
       27.19         3.85        34.32        16.44         5.79        45.07 
TCGA-BP-4998 TCGA-BP-4999 TCGA-BP-5000 TCGA-BP-5001 TCGA-BP-5004 TCGA-BP-5006 
       30.61        41.62        18.51        38.70        37.02        27.62 
TCGA-BP-5007 TCGA-BP-5008 TCGA-BP-5009 TCGA-BP-5010 TCGA-BP-5169 TCGA-BP-5170 
       37.48        35.21        35.90        28.83         6.31        79.27 
TCGA-BP-5173 TCGA-BP-5174 TCGA-BP-5175 TCGA-BP-5176 TCGA-BP-5177 TCGA-BP-5178 
        1.78        74.20        30.64        52.27         9.63        62.86 
TCGA-BP-5180 TCGA-BP-5182 TCGA-BP-5183 TCGA-BP-5184 TCGA-BP-5185 TCGA-BP-5186 
       62.20        38.30        36.23        37.25        37.22        22.78 
TCGA-BP-5187 TCGA-BP-5189 TCGA-BP-5190 TCGA-BP-5191 TCGA-BP-5192 TCGA-BP-5194 
       13.35        27.02        33.21        31.76        23.47        13.41 
TCGA-BP-5195 TCGA-BP-5196 TCGA-BP-5198 TCGA-BP-5199 TCGA-BP-5200 TCGA-BP-5201 
       24.59        33.47        19.82        44.52        28.96        31.27 
TCGA-BP-5202 TCGA-CJ-4634 TCGA-CJ-4636 TCGA-CJ-4637 TCGA-CJ-4638 TCGA-CJ-4639 
        0.95        59.84        63.25        73.22        14.17        75.88 
TCGA-CJ-4640 TCGA-CJ-4641 TCGA-CJ-4643 TCGA-CJ-4644 TCGA-CJ-4882 TCGA-CJ-4897 
       65.69        54.61        58.92        11.05        61.91        59.44 
TCGA-CJ-4899 TCGA-CJ-4901 TCGA-CJ-4902 TCGA-CJ-4903 TCGA-CJ-4904 TCGA-CJ-4905 
       50.20        47.67        49.94        51.25        58.92        49.15 
TCGA-CJ-4907 TCGA-CJ-4908 TCGA-CJ-4912 TCGA-CJ-4913 TCGA-CJ-4916 TCGA-CJ-4918 
       49.25        50.30        54.44        38.56        45.11         3.02 
TCGA-CJ-4920 TCGA-CJ-4923 TCGA-CJ-5671 TCGA-CJ-5672 TCGA-CJ-5675 TCGA-CJ-5676 
        4.57        18.81        63.85        72.00        79.86        84.66 
TCGA-CJ-5677 TCGA-CJ-5678 TCGA-CJ-5679 TCGA-CJ-5680 TCGA-CJ-5681 TCGA-CJ-5682 
       25.71        18.84        22.29        25.25        18.12        61.91 
TCGA-CJ-5683 TCGA-CJ-5684 TCGA-CJ-5686 TCGA-CJ-6027 TCGA-CJ-6028 TCGA-CJ-6030 
       62.10        73.32        67.00        60.99        53.42        75.55 
TCGA-CJ-6031 TCGA-CJ-6032 TCGA-CJ-6033 TCGA-CW-5580 TCGA-CW-5581 TCGA-CW-5583 
       62.63        83.77         7.36        64.57        92.02        81.83 
TCGA-CW-5584 TCGA-CW-5585 TCGA-CW-5588 TCGA-CW-5589 TCGA-CW-5591 TCGA-CW-6087 
        5.39        85.78        66.28        78.15        74.63         1.35 
TCGA-CW-6090 TCGA-CW-6093 TCGA-CZ-4853 TCGA-CZ-4856 TCGA-CZ-4859 TCGA-CZ-4863 
       75.88        79.89        25.45         0.59        58.75        55.56 
TCGA-CZ-4866 TCGA-CZ-5451 TCGA-CZ-5452 TCGA-CZ-5453 TCGA-CZ-5454 TCGA-CZ-5456 
       58.13        54.84        51.16         0.82        23.74        51.22 
TCGA-CZ-5457 TCGA-CZ-5458 TCGA-CZ-5459 TCGA-CZ-5460 TCGA-CZ-5461 TCGA-CZ-5462 
       50.86        51.22        49.81        47.01        10.85        10.22 
TCGA-CZ-5463 TCGA-CZ-5464 TCGA-CZ-5465 TCGA-CZ-5466 TCGA-CZ-5467 TCGA-CZ-5468 
       21.76        49.05        45.27        22.52         2.40         1.94 
TCGA-CZ-5469 TCGA-CZ-5982 TCGA-CZ-5984 TCGA-CZ-5985 TCGA-CZ-5986 TCGA-CZ-5987 
       31.07        67.13        49.02        53.56        12.26        14.30 
TCGA-CZ-5988 TCGA-CZ-5989 TCGA-EU-5904 TCGA-EU-5905 TCGA-EU-5906 TCGA-EU-5907 
       22.78        52.57        18.08         3.88         6.77         4.14 

  TOR1A MUTATED TOR1A WILD-TYPE 
           2.20            0.13 
  TOR1A MUTATED TOR1A WILD-TYPE 
          48.10          109.64 
  TOR1A MUTATED TOR1A WILD-TYPE 
          28.67           34.29 
[1] "2.2 - 48.1 (28.7)"  "0.1 - 109.6 (34.3)"
     TCGA-A3-3308      TCGA-A3-3311      TCGA-A3-3316      TCGA-A3-3317 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-A3-3319      TCGA-A3-3320      TCGA-A3-3322      TCGA-A3-3323 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-A3-3324      TCGA-A3-3326      TCGA-A3-3346      TCGA-A3-3347 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-A3-3349      TCGA-A3-3351      TCGA-A3-3357      TCGA-A3-3358 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-A3-3362      TCGA-A3-3363      TCGA-A3-3365      TCGA-A3-3367 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE"   "TOR1A MUTATED" "TOR1A WILD-TYPE" 
     TCGA-A3-3370      TCGA-A3-3372      TCGA-A3-3373      TCGA-A3-3376 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-A3-3378      TCGA-A3-3380      TCGA-A3-3382      TCGA-A3-3383 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-A3-3385      TCGA-A3-3387      TCGA-AK-3429      TCGA-AK-3430 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-AK-3436      TCGA-AK-3444      TCGA-AK-3451      TCGA-AK-3455 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-AK-3456      TCGA-AK-3458      TCGA-B0-4700      TCGA-B0-4706 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-4710      TCGA-B0-4712      TCGA-B0-4810      TCGA-B0-4811 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-4815      TCGA-B0-4816      TCGA-B0-4818      TCGA-B0-4823 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-4827      TCGA-B0-4842      TCGA-B0-4852      TCGA-B0-4945 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5075      TCGA-B0-5077      TCGA-B0-5080      TCGA-B0-5081 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5085      TCGA-B0-5088      TCGA-B0-5092      TCGA-B0-5094 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5095      TCGA-B0-5096      TCGA-B0-5097      TCGA-B0-5099 
"TOR1A WILD-TYPE"   "TOR1A MUTATED" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5100      TCGA-B0-5102      TCGA-B0-5104      TCGA-B0-5106 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5107      TCGA-B0-5108      TCGA-B0-5109      TCGA-B0-5110 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5113      TCGA-B0-5115      TCGA-B0-5116      TCGA-B0-5119 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5120      TCGA-B0-5121      TCGA-B0-5399      TCGA-B0-5400 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5402      TCGA-B0-5691      TCGA-B0-5692      TCGA-B0-5693 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5694      TCGA-B0-5695      TCGA-B0-5696      TCGA-B0-5697 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5698      TCGA-B0-5699      TCGA-B0-5701      TCGA-B0-5702 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5703      TCGA-B0-5705      TCGA-B0-5706      TCGA-B0-5707 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5709      TCGA-B0-5710      TCGA-B0-5711      TCGA-B0-5713 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5812      TCGA-B2-3924      TCGA-B2-4098      TCGA-B2-4099 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B2-4101      TCGA-B2-4102      TCGA-B2-5633      TCGA-B2-5635 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B2-5641      TCGA-B4-5377      TCGA-B8-4143      TCGA-B8-4146 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B8-4148      TCGA-B8-4151      TCGA-B8-4153      TCGA-B8-4154 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B8-4620      TCGA-B8-4621      TCGA-B8-4622      TCGA-B8-5158 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B8-5159      TCGA-B8-5163      TCGA-B8-5164      TCGA-B8-5165 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B8-5545      TCGA-B8-5546      TCGA-B8-5549      TCGA-B8-5551 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B8-5552      TCGA-BP-4161      TCGA-BP-4162      TCGA-BP-4163 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4164      TCGA-BP-4167      TCGA-BP-4770      TCGA-BP-4782 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4801      TCGA-BP-4960      TCGA-BP-4961      TCGA-BP-4962 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4963      TCGA-BP-4964      TCGA-BP-4967      TCGA-BP-4968 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4970      TCGA-BP-4971      TCGA-BP-4972      TCGA-BP-4973 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4974      TCGA-BP-4975      TCGA-BP-4976      TCGA-BP-4977 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4981      TCGA-BP-4982      TCGA-BP-4983      TCGA-BP-4985 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4986      TCGA-BP-4987      TCGA-BP-4988      TCGA-BP-4989 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4991      TCGA-BP-4992      TCGA-BP-4993      TCGA-BP-4995 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4998      TCGA-BP-4999      TCGA-BP-5000      TCGA-BP-5001 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5004      TCGA-BP-5006      TCGA-BP-5007      TCGA-BP-5008 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5009      TCGA-BP-5010      TCGA-BP-5168      TCGA-BP-5169 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE"   "TOR1A MUTATED" "TOR1A WILD-TYPE" 
     TCGA-BP-5170      TCGA-BP-5173      TCGA-BP-5174      TCGA-BP-5175 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5176      TCGA-BP-5177      TCGA-BP-5178      TCGA-BP-5180 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5182      TCGA-BP-5183      TCGA-BP-5184      TCGA-BP-5185 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5186      TCGA-BP-5187      TCGA-BP-5189      TCGA-BP-5190 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5191      TCGA-BP-5192      TCGA-BP-5194      TCGA-BP-5195 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5196      TCGA-BP-5198      TCGA-BP-5199      TCGA-BP-5200 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5201      TCGA-BP-5202      TCGA-CJ-4634      TCGA-CJ-4636 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-4637      TCGA-CJ-4638      TCGA-CJ-4639      TCGA-CJ-4640 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-4641      TCGA-CJ-4643      TCGA-CJ-4644      TCGA-CJ-4882 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-4897      TCGA-CJ-4899      TCGA-CJ-4901      TCGA-CJ-4902 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-4903      TCGA-CJ-4904      TCGA-CJ-4905      TCGA-CJ-4907 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-4908      TCGA-CJ-4912      TCGA-CJ-4913      TCGA-CJ-4916 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-4918      TCGA-CJ-4920      TCGA-CJ-4923      TCGA-CJ-5671 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-5672      TCGA-CJ-5675      TCGA-CJ-5676      TCGA-CJ-5677 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-5678      TCGA-CJ-5679      TCGA-CJ-5680      TCGA-CJ-5681 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-5682      TCGA-CJ-5683      TCGA-CJ-5684      TCGA-CJ-5686 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-6027      TCGA-CJ-6028      TCGA-CJ-6030      TCGA-CJ-6031 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-6032      TCGA-CJ-6033      TCGA-CW-5580      TCGA-CW-5581 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CW-5583      TCGA-CW-5584      TCGA-CW-5585      TCGA-CW-5588 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CW-5589      TCGA-CW-5591      TCGA-CW-6087      TCGA-CW-6090 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CW-6093      TCGA-CZ-4853      TCGA-CZ-4856      TCGA-CZ-4859 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CZ-4863      TCGA-CZ-4866      TCGA-CZ-5451      TCGA-CZ-5452 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CZ-5453      TCGA-CZ-5454      TCGA-CZ-5456      TCGA-CZ-5457 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CZ-5458      TCGA-CZ-5459      TCGA-CZ-5460      TCGA-CZ-5461 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CZ-5462      TCGA-CZ-5463      TCGA-CZ-5464      TCGA-CZ-5465 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CZ-5466      TCGA-CZ-5467      TCGA-CZ-5468      TCGA-CZ-5469 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CZ-5982      TCGA-CZ-5984      TCGA-CZ-5985      TCGA-CZ-5986 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CZ-5987      TCGA-CZ-5988      TCGA-CZ-5989      TCGA-EU-5904 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-EU-5905      TCGA-EU-5906      TCGA-EU-5907 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-A3-3308      TCGA-A3-3311      TCGA-A3-3316      TCGA-A3-3317 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-A3-3319      TCGA-A3-3320      TCGA-A3-3322      TCGA-A3-3323 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-A3-3324      TCGA-A3-3326      TCGA-A3-3346      TCGA-A3-3347 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-A3-3349      TCGA-A3-3351      TCGA-A3-3357      TCGA-A3-3358 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-A3-3362      TCGA-A3-3363      TCGA-A3-3365      TCGA-A3-3367 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE"   "TOR1A MUTATED" "TOR1A WILD-TYPE" 
     TCGA-A3-3370      TCGA-A3-3372      TCGA-A3-3373      TCGA-A3-3376 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-A3-3378      TCGA-A3-3380      TCGA-A3-3382      TCGA-A3-3383 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-A3-3385      TCGA-A3-3387      TCGA-AK-3429      TCGA-AK-3430 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-AK-3436      TCGA-AK-3444      TCGA-AK-3451      TCGA-AK-3455 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-AK-3456      TCGA-AK-3458      TCGA-B0-4700      TCGA-B0-4706 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-4710      TCGA-B0-4712      TCGA-B0-4810      TCGA-B0-4811 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-4815      TCGA-B0-4816      TCGA-B0-4818      TCGA-B0-4823 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-4827      TCGA-B0-4842      TCGA-B0-4852      TCGA-B0-4945 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5075      TCGA-B0-5077      TCGA-B0-5080      TCGA-B0-5081 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5085      TCGA-B0-5088      TCGA-B0-5092      TCGA-B0-5094 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5095      TCGA-B0-5096      TCGA-B0-5097      TCGA-B0-5099 
"TOR1A WILD-TYPE"   "TOR1A MUTATED" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5100      TCGA-B0-5102      TCGA-B0-5104      TCGA-B0-5106 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5107      TCGA-B0-5108      TCGA-B0-5109      TCGA-B0-5110 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5113      TCGA-B0-5115      TCGA-B0-5116      TCGA-B0-5119 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5120      TCGA-B0-5121      TCGA-B0-5399      TCGA-B0-5400 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5402      TCGA-B0-5691      TCGA-B0-5692      TCGA-B0-5693 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5694      TCGA-B0-5695      TCGA-B0-5696      TCGA-B0-5697 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5698      TCGA-B0-5699      TCGA-B0-5701      TCGA-B0-5702 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5703      TCGA-B0-5705      TCGA-B0-5706      TCGA-B0-5707 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5709      TCGA-B0-5710      TCGA-B0-5711      TCGA-B0-5713 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5812      TCGA-B2-3924      TCGA-B2-4098      TCGA-B2-4099 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B2-4101      TCGA-B2-4102      TCGA-B2-5633      TCGA-B2-5635 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B2-5641      TCGA-B4-5377      TCGA-B8-4143      TCGA-B8-4146 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B8-4148      TCGA-B8-4151      TCGA-B8-4153      TCGA-B8-4154 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B8-4620      TCGA-B8-4621      TCGA-B8-4622      TCGA-B8-5158 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B8-5159      TCGA-B8-5163      TCGA-B8-5164      TCGA-B8-5165 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B8-5545      TCGA-B8-5546      TCGA-B8-5549      TCGA-B8-5551 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B8-5552      TCGA-BP-4161      TCGA-BP-4162      TCGA-BP-4163 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4164      TCGA-BP-4167      TCGA-BP-4770      TCGA-BP-4782 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4801      TCGA-BP-4960      TCGA-BP-4961      TCGA-BP-4962 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4963      TCGA-BP-4964      TCGA-BP-4967      TCGA-BP-4968 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4970      TCGA-BP-4971      TCGA-BP-4972      TCGA-BP-4973 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4974      TCGA-BP-4975      TCGA-BP-4976      TCGA-BP-4977 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4981      TCGA-BP-4982      TCGA-BP-4983      TCGA-BP-4985 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4986      TCGA-BP-4987      TCGA-BP-4988      TCGA-BP-4989 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4991      TCGA-BP-4992      TCGA-BP-4993      TCGA-BP-4995 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4998      TCGA-BP-4999      TCGA-BP-5000      TCGA-BP-5001 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5004      TCGA-BP-5006      TCGA-BP-5007      TCGA-BP-5008 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5009      TCGA-BP-5010      TCGA-BP-5168      TCGA-BP-5169 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE"   "TOR1A MUTATED" "TOR1A WILD-TYPE" 
     TCGA-BP-5170      TCGA-BP-5173      TCGA-BP-5174      TCGA-BP-5175 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5176      TCGA-BP-5177      TCGA-BP-5178      TCGA-BP-5180 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5182      TCGA-BP-5183      TCGA-BP-5184      TCGA-BP-5185 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5186      TCGA-BP-5187      TCGA-BP-5189      TCGA-BP-5190 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5191      TCGA-BP-5192      TCGA-BP-5194      TCGA-BP-5195 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5196      TCGA-BP-5198      TCGA-BP-5199      TCGA-BP-5200 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5201      TCGA-BP-5202      TCGA-CJ-4634      TCGA-CJ-4636 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-4637      TCGA-CJ-4638      TCGA-CJ-4639      TCGA-CJ-4640 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-4641      TCGA-CJ-4643      TCGA-CJ-4644      TCGA-CJ-4882 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-4897      TCGA-CJ-4899      TCGA-CJ-4901      TCGA-CJ-4902 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-4903      TCGA-CJ-4904      TCGA-CJ-4905      TCGA-CJ-4907 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-4908      TCGA-CJ-4912      TCGA-CJ-4913      TCGA-CJ-4916 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-4918      TCGA-CJ-4920      TCGA-CJ-4923      TCGA-CJ-5671 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-5672      TCGA-CJ-5675      TCGA-CJ-5676      TCGA-CJ-5677 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-5678      TCGA-CJ-5679      TCGA-CJ-5680      TCGA-CJ-5681 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-5682      TCGA-CJ-5683      TCGA-CJ-5684      TCGA-CJ-5686 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-6027      TCGA-CJ-6028      TCGA-CJ-6030      TCGA-CJ-6031 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-6032      TCGA-CJ-6033      TCGA-CW-5580      TCGA-CW-5581 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CW-5583      TCGA-CW-5584      TCGA-CW-5585      TCGA-CW-5588 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CW-5589      TCGA-CW-5591      TCGA-CW-6087      TCGA-CW-6090 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CW-6093      TCGA-CZ-4853      TCGA-CZ-4856      TCGA-CZ-4859 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CZ-4863      TCGA-CZ-4866      TCGA-CZ-5451      TCGA-CZ-5452 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CZ-5453      TCGA-CZ-5454      TCGA-CZ-5456      TCGA-CZ-5457 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CZ-5458      TCGA-CZ-5459      TCGA-CZ-5460      TCGA-CZ-5461 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CZ-5462      TCGA-CZ-5463      TCGA-CZ-5464      TCGA-CZ-5465 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CZ-5466      TCGA-CZ-5467      TCGA-CZ-5468      TCGA-CZ-5469 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CZ-5982      TCGA-CZ-5984      TCGA-CZ-5985      TCGA-CZ-5986 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CZ-5987      TCGA-CZ-5988      TCGA-CZ-5989      TCGA-EU-5904 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-EU-5905      TCGA-EU-5906      TCGA-EU-5907 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-A3-3308      TCGA-A3-3311      TCGA-A3-3316      TCGA-A3-3317 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-A3-3319      TCGA-A3-3320      TCGA-A3-3322      TCGA-A3-3323 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-A3-3324      TCGA-A3-3326      TCGA-A3-3346      TCGA-A3-3347 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-A3-3349      TCGA-A3-3351      TCGA-A3-3357      TCGA-A3-3358 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-A3-3362      TCGA-A3-3363      TCGA-A3-3365      TCGA-A3-3367 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE"   "TOR1A MUTATED" "TOR1A WILD-TYPE" 
     TCGA-A3-3370      TCGA-A3-3372      TCGA-A3-3373      TCGA-A3-3376 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-A3-3378      TCGA-A3-3380      TCGA-A3-3382      TCGA-A3-3383 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-A3-3385      TCGA-A3-3387      TCGA-AK-3429      TCGA-AK-3430 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-AK-3436      TCGA-AK-3444      TCGA-AK-3451      TCGA-AK-3455 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-AK-3456      TCGA-AK-3458      TCGA-B0-4700      TCGA-B0-4706 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-4710      TCGA-B0-4712      TCGA-B0-4810      TCGA-B0-4811 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-4815      TCGA-B0-4816      TCGA-B0-4818      TCGA-B0-4823 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-4827      TCGA-B0-4842      TCGA-B0-4852      TCGA-B0-4945 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5075      TCGA-B0-5077      TCGA-B0-5080      TCGA-B0-5081 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5085      TCGA-B0-5088      TCGA-B0-5092      TCGA-B0-5094 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5095      TCGA-B0-5096      TCGA-B0-5097      TCGA-B0-5099 
"TOR1A WILD-TYPE"   "TOR1A MUTATED" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5100      TCGA-B0-5102      TCGA-B0-5104      TCGA-B0-5106 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5107      TCGA-B0-5108      TCGA-B0-5109      TCGA-B0-5110 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5113      TCGA-B0-5115      TCGA-B0-5116      TCGA-B0-5119 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5120      TCGA-B0-5121      TCGA-B0-5399      TCGA-B0-5400 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5402      TCGA-B0-5691      TCGA-B0-5692      TCGA-B0-5693 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5694      TCGA-B0-5695      TCGA-B0-5696      TCGA-B0-5697 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5698      TCGA-B0-5699      TCGA-B0-5701      TCGA-B0-5702 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5703      TCGA-B0-5705      TCGA-B0-5706      TCGA-B0-5707 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5709      TCGA-B0-5710      TCGA-B0-5711      TCGA-B0-5713 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B0-5812      TCGA-B2-3924      TCGA-B2-4098      TCGA-B2-4099 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B2-4101      TCGA-B2-4102      TCGA-B2-5633      TCGA-B2-5635 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B2-5641      TCGA-B4-5377      TCGA-B8-4143      TCGA-B8-4146 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B8-4148      TCGA-B8-4151      TCGA-B8-4153      TCGA-B8-4154 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B8-4620      TCGA-B8-4621      TCGA-B8-4622      TCGA-B8-5158 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B8-5159      TCGA-B8-5163      TCGA-B8-5164      TCGA-B8-5165 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B8-5545      TCGA-B8-5546      TCGA-B8-5549      TCGA-B8-5551 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-B8-5552      TCGA-BP-4161      TCGA-BP-4162      TCGA-BP-4163 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4164      TCGA-BP-4167      TCGA-BP-4770      TCGA-BP-4782 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4801      TCGA-BP-4960      TCGA-BP-4961      TCGA-BP-4962 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4963      TCGA-BP-4964      TCGA-BP-4967      TCGA-BP-4968 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4970      TCGA-BP-4971      TCGA-BP-4972      TCGA-BP-4973 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4974      TCGA-BP-4975      TCGA-BP-4976      TCGA-BP-4977 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4981      TCGA-BP-4982      TCGA-BP-4983      TCGA-BP-4985 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4986      TCGA-BP-4987      TCGA-BP-4988      TCGA-BP-4989 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4991      TCGA-BP-4992      TCGA-BP-4993      TCGA-BP-4995 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-4998      TCGA-BP-4999      TCGA-BP-5000      TCGA-BP-5001 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5004      TCGA-BP-5006      TCGA-BP-5007      TCGA-BP-5008 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5009      TCGA-BP-5010      TCGA-BP-5168      TCGA-BP-5169 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE"   "TOR1A MUTATED" "TOR1A WILD-TYPE" 
     TCGA-BP-5170      TCGA-BP-5173      TCGA-BP-5174      TCGA-BP-5175 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5176      TCGA-BP-5177      TCGA-BP-5178      TCGA-BP-5180 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5182      TCGA-BP-5183      TCGA-BP-5184      TCGA-BP-5185 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5186      TCGA-BP-5187      TCGA-BP-5189      TCGA-BP-5190 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5191      TCGA-BP-5192      TCGA-BP-5194      TCGA-BP-5195 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5196      TCGA-BP-5198      TCGA-BP-5199      TCGA-BP-5200 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-BP-5201      TCGA-BP-5202      TCGA-CJ-4634      TCGA-CJ-4636 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-4637      TCGA-CJ-4638      TCGA-CJ-4639      TCGA-CJ-4640 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-4641      TCGA-CJ-4643      TCGA-CJ-4644      TCGA-CJ-4882 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-4897      TCGA-CJ-4899      TCGA-CJ-4901      TCGA-CJ-4902 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-4903      TCGA-CJ-4904      TCGA-CJ-4905      TCGA-CJ-4907 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-4908      TCGA-CJ-4912      TCGA-CJ-4913      TCGA-CJ-4916 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-4918      TCGA-CJ-4920      TCGA-CJ-4923      TCGA-CJ-5671 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-5672      TCGA-CJ-5675      TCGA-CJ-5676      TCGA-CJ-5677 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-5678      TCGA-CJ-5679      TCGA-CJ-5680      TCGA-CJ-5681 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-5682      TCGA-CJ-5683      TCGA-CJ-5684      TCGA-CJ-5686 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-6027      TCGA-CJ-6028      TCGA-CJ-6030      TCGA-CJ-6031 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CJ-6032      TCGA-CJ-6033      TCGA-CW-5580      TCGA-CW-5581 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CW-5583      TCGA-CW-5584      TCGA-CW-5585      TCGA-CW-5588 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CW-5589      TCGA-CW-5591      TCGA-CW-6087      TCGA-CW-6090 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CW-6093      TCGA-CZ-4853      TCGA-CZ-4856      TCGA-CZ-4859 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CZ-4863      TCGA-CZ-4866      TCGA-CZ-5451      TCGA-CZ-5452 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CZ-5453      TCGA-CZ-5454      TCGA-CZ-5456      TCGA-CZ-5457 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CZ-5458      TCGA-CZ-5459      TCGA-CZ-5460      TCGA-CZ-5461 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CZ-5462      TCGA-CZ-5463      TCGA-CZ-5464      TCGA-CZ-5465 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CZ-5466      TCGA-CZ-5467      TCGA-CZ-5468      TCGA-CZ-5469 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CZ-5982      TCGA-CZ-5984      TCGA-CZ-5985      TCGA-CZ-5986 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-CZ-5987      TCGA-CZ-5988      TCGA-CZ-5989      TCGA-EU-5904 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
     TCGA-EU-5905      TCGA-EU-5906      TCGA-EU-5907 
"TOR1A WILD-TYPE" "TOR1A WILD-TYPE" "TOR1A WILD-TYPE" 
[1] "hr=" "3.7"
D10V2, continuous
D10V3, binary
                 cls
clus                0   1
  TOR1A MUTATED     1   2
  TOR1A WILD-TYPE 101 189
[1] "tbl2"
                 cls
clus              [,1] [,2]
  TOR1A MUTATED      1    2
  TOR1A WILD-TYPE  101  189
        clus
vv       TOR1A MUTATED TOR1A WILD-TYPE
  FEMALE             1             101
  MALE               2             189
D10V4, continuous
D10V5, binary
                 cls
clus                0   1
  TOR1A MUTATED     3   0
  TOR1A WILD-TYPE 251  39
[1] "tbl2"
                 cls
clus              [,1] [,2]
  TOR1A MUTATED      3    0
  TOR1A WILD-TYPE  251   39
    clus
vv   TOR1A MUTATED TOR1A WILD-TYPE
  M0             3             251
  M1             0              39
                 vv
clus               N0  N1  NX
  TOR1A MUTATED     0   1   2
  TOR1A WILD-TYPE 135  10 145
D10V6, multiclass
    clus
vv   TOR1A MUTATED TOR1A WILD-TYPE
  N0             0             135
  N1             1              10
  NX             2             145
D10V7, continuous
                 vv
clus              STAGE I STAGE II STAGE III STAGE IV
  TOR1A MUTATED         2        0         1        0
  TOR1A WILD-TYPE     142       32        76       40
D10V8, multiclass
           clus
vv          TOR1A MUTATED TOR1A WILD-TYPE
  STAGE I               2             142
  STAGE II              0              32
  STAGE III             1              76
  STAGE IV              0              40
                         V1.D                            V2 
              "Time to Death"                         "AGE" 
                           V3                            V4 
                     "GENDER" "KARNOFSKY.PERFORMANCE.SCORE" 
                           V5                            V6 
         "DISTANT.METASTASIS"       "LYMPH.NODE.METASTASIS" 
                           V7                            V8 
            "TUMOR.STAGECODE"       "NEOPLASM.DISEASESTAGE" 
> q(save="no")
