		Clinical Features	Time to Death		AGE		GENDER		KARNOFSKY.PERFORMANCE.SCORE		HISTOLOGICAL.TYPE		RADIATIONS.RADIATION.REGIMENINDICATION		NUMBERPACKYEARSSMOKED		YEAROFTOBACCOSMOKINGONSET		DISTANT.METASTASIS		LYMPH.NODE.METASTASIS		COMPLETENESS.OF.RESECTION		TUMOR.STAGECODE		NEOPLASM.DISEASESTAGE	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	Chi-square test_P	Chi-square test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	Chi-square test_P	Chi-square test_Q
1p gain	0 (0%)	340	0.86051	1	0.00092766	0.84	1	1	0.47533	1	0.92642	1	0.71261	1	0.91797	1	0.82421	1	0.84515	1	0.019609	1	0.35965	1	NA	NA	0.069412	1
1q gain	0 (0%)	237	0.62776	1	0.2612	1	0.53157	1	0.55691	1	0.39888	1	0.45888	1	0.5207	1	0.64802	1	0.39224	1	0.055184	1	0.15717	1	NA	NA	0.1506	1
2p gain	0 (0%)	344	0.18069	1	0.040835	1	0.11094	1	0.55773	1	0.77679	1	0.45011	1	0.64563	1	0.75491	1	0.19412	1	0.86988	1	0.37804	1	NA	NA	0.057095	1
2q gain	0 (0%)	351	0.35514	1	0.14451	1	0.39531	1	NA	NA	0.83562	1	0.69193	1	0.70667	1	0.96108	1	0.16047	1	0.90706	1	1	1	NA	NA	0.089269	1
3p gain	0 (0%)	379	0.085808	1	0.62108	1	1	1	NA	NA	0.9664	1	0.3809	1	0.86545	1	0.25231	1	0.90966	1	0.51649	1	0.37266	1	NA	NA	0.53226	1
3q gain	0 (0%)	366	0.32117	1	0.94254	1	0.52748	1	NA	NA	0.99867	1	0.28848	1	0.6015	1	0.36548	1	0.96454	1	0.62867	1	0.65108	1	NA	NA	0.17461	1
4p gain	0 (0%)	363	0.34162	1	0.014907	1	0.4207	1	NA	NA	0.69144	1	0.34212	1	0.067096	1	0.96804	1	0.054183	1	0.93827	1	0.64173	1	NA	NA	0.00033788	0.307
4q gain	0 (0%)	382	0.67322	1	0.85845	1	0.25415	1	NA	NA	0.99655	1	0.28415	1	0.057128	1	0.023459	1	0.4249	1	0.65723	1	1	1	NA	NA	0.0039911	1
5p gain	0 (0%)	242	0.5579	1	0.063172	1	0.60036	1	0.82987	1	0.14348	1	0.32205	1	0.012918	1	0.66389	1	0.52982	1	0.42284	1	0.25837	1	NA	NA	0.55157	1
5q gain	0 (0%)	343	0.9795	1	0.84382	1	0.53347	1	NA	NA	0.79366	1	0.24938	1	0.56392	1	0.75207	1	0.56848	1	0.62342	1	0.4729	1	NA	NA	0.83161	1
6p gain	0 (0%)	330	0.50806	1	0.9711	1	0.77873	1	0.73778	1	0.2518	1	1	1	0.6974	1	0.30616	1	0.17023	1	0.45	1	0.93648	1	NA	NA	0.56784	1
6q gain	0 (0%)	374	0.99195	1	0.26152	1	0.014661	1	NA	NA	0.975	1	0.51524	1	0.56577	1	0.41279	1	0.093985	1	0.93399	1	0.61841	1	NA	NA	0.071593	1
7p gain	0 (0%)	256	0.15992	1	0.03903	1	0.74779	1	0.22958	1	0.44794	1	0.62173	1	0.4012	1	0.72065	1	0.28173	1	0.028106	1	0.54708	1	NA	NA	0.10725	1
7q gain	0 (0%)	295	0.72786	1	0.014342	1	0.47886	1	0.91496	1	0.26153	1	0.39737	1	0.74397	1	0.73838	1	0.066295	1	0.41464	1	0.37283	1	NA	NA	0.069866	1
8p gain	0 (0%)	341	0.4989	1	0.0051844	1	0.12486	1	NA	NA	0.46817	1	0.47548	1	0.16053	1	0.01742	1	0.88745	1	0.32913	1	1	1	NA	NA	0.67658	1
8q gain	0 (0%)	266	0.94509	1	0.0037694	1	0.22945	1	0.30882	1	0.1925	1	0.80143	1	0.68589	1	0.017552	1	0.61455	1	0.151	1	0.76666	1	NA	NA	0.80466	1
9p gain	0 (0%)	377	0.23059	1	0.21727	1	0.77739	1	NA	NA	0.79827	1	1	1	0.30751	1	0.68775	1	0.023201	1	0.57722	1	0.61841	1	NA	NA	0.96496	1
9q gain	0 (0%)	384	0.072537	1	0.16045	1	0.66387	1	NA	NA	0.9974	1	1	1	0.31222	1	0.7797	1	6.6917e-05	0.0611	0.71067	1	1	1	NA	NA	0.81007	1
10p gain	0 (0%)	345	0.90877	1	0.44549	1	0.03599	1	0.84243	1	0.8231	1	0.24295	1	0.044357	1	0.8734	1	0.8097	1	0.3624	1	0.24206	1	NA	NA	0.36563	1
10q gain	0 (0%)	366	0.99937	1	0.78224	1	0.028943	1	NA	NA	0.38268	1	0.61393	1	0.17088	1	0.87874	1	0.61161	1	0.36036	1	0.11792	1	NA	NA	0.49028	1
11p gain	0 (0%)	358	0.44522	1	0.058916	1	0.5742	1	0.50268	1	0.72474	1	0.64567	1	0.42723	1	0.87173	1	0.53271	1	0.51767	1	0.50161	1	NA	NA	0.79307	1
11q gain	0 (0%)	346	0.37074	1	0.00016865	0.154	0.19434	1	0.58588	1	0.76699	1	0.1251	1	0.25455	1	0.061705	1	0.63239	1	0.44454	1	0.82975	1	NA	NA	0.27114	1
12p gain	0 (0%)	340	0.77133	1	0.0084197	1	1	1	NA	NA	0.5452	1	0.48439	1	0.59937	1	0.11086	1	0.8447	1	0.24067	1	0.77627	1	NA	NA	0.0058015	1
12q gain	0 (0%)	349	0.92514	1	0.058194	1	1	1	NA	NA	0.45973	1	0.41415	1	0.028855	1	0.04637	1	0.8545	1	0.32595	1	0.57834	1	NA	NA	0.16141	1
13q gain	0 (0%)	374	0.88296	1	0.57548	1	1	1	NA	NA	0.96962	1	0.14861	1	0.93628	1	0.80551	1	0.22967	1	0.73055	1	1	1	NA	NA	0.29662	1
14q gain	0 (0%)	348	0.40378	1	0.42375	1	0.40939	1	0.63743	1	0.42605	1	0.23744	1	0.57928	1	0.50647	1	0.72802	1	0.17192	1	0.72943	1	NA	NA	0.51978	1
15q gain	0 (0%)	379	0.26742	1	0.4107	1	0.75971	1	NA	NA	0.12737	1	0.3809	1	0.878	1	0.86935	1	0.73898	1	0.64104	1	0.57456	1	NA	NA	0.67511	1
16p gain	0 (0%)	337	0.55228	1	0.12648	1	1	1	0.35595	1	0.59923	1	1	1	0.63896	1	0.81401	1	0.71058	1	0.87165	1	0.25829	1	NA	NA	0.53352	1
16q gain	0 (0%)	355	0.79795	1	0.040499	1	0.47158	1	0.31941	1	0.23069	1	0.38652	1	0.096561	1	0.64353	1	0.30386	1	0.42526	1	1	1	NA	NA	0.026939	1
17p gain	0 (0%)	365	0.47583	1	0.56037	1	0.21233	1	0.28361	1	0.075903	1	0.019088	1	0.054198	1	0.89223	1	0.30166	1	0.94865	1	0.4965	1	NA	NA	0.039054	1
17q gain	0 (0%)	322	0.27348	1	0.57916	1	1	1	0.34446	1	0.26076	1	0.10044	1	0.081242	1	0.71344	1	0.098686	1	0.86964	1	0.0087846	1	NA	NA	0.22869	1
18p gain	0 (0%)	349	0.80998	1	0.068875	1	0.24274	1	0.61317	1	0.072194	1	0.70641	1	0.10304	1	0.62719	1	0.71174	1	0.73091	1	0.74113	1	NA	NA	0.058315	1
18q gain	0 (0%)	365	0.23832	1	0.044128	1	0.40653	1	0.61317	1	0.24258	1	0.30641	1	0.35661	1	0.070932	1	0.94365	1	0.58986	1	0.37688	1	NA	NA	0.21546	1
19p gain	0 (0%)	383	0.92561	1	0.049842	1	1	1	NA	NA	0.99889	1	1	1	0.45018	1	0.41382	1	0.0001711	0.156	0.049312	1	0.41196	1	NA	NA	0.070697	1
19q gain	0 (0%)	369	0.29487	1	0.77676	1	0.49097	1	NA	NA	0.4683	1	0.61311	1	0.44513	1	0.21931	1	0.11818	1	0.27822	1	0.72537	1	NA	NA	0.12729	1
20p gain	0 (0%)	337	0.93447	1	0.66314	1	0.88157	1	0.54787	1	0.73403	1	0.71971	1	0.88616	1	0.59473	1	0.45901	1	0.59702	1	0.51595	1	NA	NA	0.33827	1
20q gain	0 (0%)	323	0.79994	1	0.20039	1	0.34324	1	0.13758	1	0.61689	1	0.74918	1	0.033202	1	0.80573	1	0.64995	1	0.80324	1	0.89826	1	NA	NA	0.25145	1
21q gain	0 (0%)	355	0.80222	1	0.84414	1	0.2129	1	NA	NA	0.71967	1	1	1	0.93903	1	0.55399	1	0.87367	1	0.19291	1	1	1	NA	NA	0.97794	1
22q gain	0 (0%)	374	0.65904	1	0.35364	1	0.79345	1	NA	NA	0.25358	1	0.51524	1	0.24814	1	0.48137	1	0.92233	1	0.29044	1	0.75411	1	NA	NA	0.26357	1
Xq gain	0 (0%)	373	0.17783	1	0.16659	1	0.44798	1	NA	NA	0.67492	1	1	1	0.40557	1	0.16293	1	0.15426	1	0.93432	1	0.65788	1	NA	NA	0.012699	1
1p loss	0 (0%)	363	0.20738	1	0.70734	1	0.22636	1	NA	NA	0.51354	1	1	1	0.22435	1	0.9585	1	0.41367	1	0.90718	1	0.31495	1	NA	NA	0.19611	1
1q loss	0 (0%)	380	0.00037407	0.339	0.74275	1	0.73762	1	NA	NA	0.0075364	1	0.35011	1	0.37235	1	0.70571	1	0.95204	1	0.17239	1	1	1	NA	NA	0.0043061	1
2p loss	0 (0%)	384	0.21902	1	0.14614	1	1	1	NA	NA	0.92183	1	1	1	0.52059	1	NA	NA	0.97698	1	0.89703	1	1	1	NA	NA	1.5258e-19	1.4e-16
2q loss	0 (0%)	386	NA	NA	NA	NA	1	1	NA	NA	0.35696	1	1	1	NA	NA	NA	NA	0.84081	1	0.7917	1	NA	NA	NA	NA	2.2186e-07	0.000203
3p loss	0 (0%)	314	0.15895	1	0.73204	1	0.79685	1	0.014059	1	0.75537	1	1	1	0.1603	1	0.11639	1	0.36915	1	0.53168	1	0.89894	1	NA	NA	0.3466	1
3q loss	0 (0%)	344	0.346	1	0.80071	1	1	1	0.017133	1	0.50659	1	0.70704	1	0.036242	1	0.59272	1	0.64214	1	0.47771	1	0.91006	1	NA	NA	0.63447	1
4p loss	0 (0%)	354	0.56421	1	0.012005	1	0.48381	1	0.62545	1	0.55952	1	0.21363	1	0.79997	1	0.22708	1	0.94782	1	0.11444	1	0.78128	1	NA	NA	0.31692	1
4q loss	0 (0%)	347	0.61614	1	0.047266	1	0.14021	1	0.85128	1	0.91654	1	0.4274	1	0.41429	1	0.98228	1	0.59818	1	0.01292	1	0.62812	1	NA	NA	0.020671	1
5p loss	0 (0%)	380	0.6891	1	0.55542	1	0.73762	1	NA	NA	0.03996	1	0.35011	1	0.36154	1	0.75018	1	0.89468	1	0.82919	1	0.23974	1	NA	NA	0.67414	1
5q loss	0 (0%)	340	0.69413	1	0.022855	1	0.047253	1	0.70535	1	0.032434	1	1	1	0.26378	1	0.42064	1	0.38674	1	0.18233	1	0.1853	1	NA	NA	0.629	1
6p loss	0 (0%)	357	0.82904	1	0.047368	1	0.13788	1	0.12001	1	0.75481	1	0.65161	1	0.13934	1	0.26625	1	0.39244	1	0.72902	1	0.35685	1	NA	NA	0.6678	1
6q loss	0 (0%)	304	0.88621	1	0.05796	1	0.46204	1	0.028529	1	0.57562	1	0.56005	1	0.062734	1	0.23824	1	0.2857	1	0.73982	1	0.77852	1	NA	NA	0.86385	1
7p loss	0 (0%)	378	0.83459	1	0.24915	1	1	1	NA	NA	0.46132	1	0.4103	1	0.62529	1	0.39651	1	0.68297	1	0.90625	1	0.32984	1	NA	NA	0.95327	1
7q loss	0 (0%)	377	0.77602	1	0.20373	1	0.55822	1	NA	NA	0.00017601	0.16	0.43838	1	0.28835	1	0.57649	1	0.81738	1	0.98642	1	0.28548	1	NA	NA	0.91411	1
8p loss	0 (0%)	291	0.63264	1	0.91946	1	0.72545	1	0.25384	1	0.15921	1	0.57936	1	0.6037	1	0.89032	1	0.22195	1	0.53013	1	0.66297	1	NA	NA	0.88522	1
8q loss	0 (0%)	375	0.60594	1	0.39246	1	0.78985	1	NA	NA	0.066747	1	1	1	0.17273	1	NA	NA	1.7217e-05	0.0158	0.62009	1	1	1	NA	NA	0.85127	1
9p loss	0 (0%)	274	0.0079724	1	0.39466	1	0.074254	1	0.86995	1	0.69807	1	1	1	0.41639	1	0.76392	1	0.50259	1	0.034204	1	0.68846	1	NA	NA	0.26179	1
9q loss	0 (0%)	293	0.52011	1	0.6377	1	1	1	0.98976	1	0.64633	1	0.57916	1	0.28392	1	0.89128	1	0.41626	1	0.31751	1	0.2955	1	NA	NA	0.61633	1
10p loss	0 (0%)	362	0.25991	1	0.71552	1	0.10835	1	NA	NA	0.16725	1	1	1	0.60549	1	0.70781	1	0.88167	1	0.61727	1	0.66267	1	NA	NA	0.95553	1
10q loss	0 (0%)	356	0.30235	1	0.20088	1	0.71878	1	NA	NA	0.0004047	0.367	1	1	0.060675	1	0.97465	1	0.96798	1	0.25625	1	0.81049	1	NA	NA	0.37149	1
11p loss	0 (0%)	360	0.29118	1	0.0072468	1	0.56341	1	NA	NA	0.58397	1	1	1	0.062351	1	0.017327	1	0.10785	1	0.41568	1	0.89206	1	NA	NA	0.12911	1
11q loss	0 (0%)	364	0.16301	1	0.8835	1	0.30653	1	0.70535	1	0.2419	1	1	1	0.032821	1	0.35383	1	0.035541	1	0.71402	1	0.74809	1	NA	NA	0.49979	1
12p loss	0 (0%)	355	0.3845	1	0.55435	1	1	1	0.53292	1	0.72265	1	1	1	0.70514	1	0.067217	1	0.52723	1	0.86512	1	0.77177	1	NA	NA	0.54695	1
12q loss	0 (0%)	368	0.056535	1	0.947	1	0.65361	1	NA	NA	0.78215	1	0.61248	1	0.97752	1	0.25983	1	0.65121	1	0.70624	1	1	1	NA	NA	0.26862	1
13q loss	0 (0%)	302	0.32886	1	0.14872	1	0.54216	1	0.56157	1	0.14712	1	0.77353	1	0.70716	1	0.15477	1	0.62814	1	0.073876	1	0.47098	1	NA	NA	0.26085	1
14q loss	0 (0%)	348	0.48419	1	0.47044	1	1	1	0.79797	1	0.41166	1	0.42056	1	0.23266	1	0.32216	1	0.30052	1	0.83509	1	0.48701	1	NA	NA	0.61565	1
15q loss	0 (0%)	308	0.73156	1	0.05628	1	0.31917	1	0.77317	1	0.14895	1	1	1	0.16298	1	0.83058	1	0.94885	1	0.84139	1	0.31177	1	NA	NA	0.48428	1
16p loss	0 (0%)	358	0.32198	1	0.2187	1	0.18858	1	NA	NA	0.36449	1	0.64567	1	0.96101	1	0.65902	1	3.7606e-05	0.0344	0.95261	1	0.34878	1	NA	NA	0.0079208	1
16q loss	0 (0%)	337	0.32495	1	0.29924	1	0.55133	1	0.72439	1	0.019453	1	1	1	0.94455	1	0.51933	1	0.013036	1	0.91111	1	0.51524	1	NA	NA	0.41613	1
17p loss	0 (0%)	293	0.78075	1	0.24523	1	0.72347	1	0.10668	1	0.65072	1	0.57916	1	0.44857	1	0.058786	1	0.83064	1	0.54034	1	0.18251	1	NA	NA	0.72201	1
17q loss	0 (0%)	375	0.025121	1	0.20468	1	0.27517	1	NA	NA	0.39526	1	1	1	0.51726	1	0.053937	1	0.97822	1	0.74219	1	0.69341	1	NA	NA	0.12451	1
18p loss	0 (0%)	321	0.3711	1	0.087874	1	0.18247	1	0.005334	1	0.25357	1	0.33487	1	0.00013619	0.124	0.028926	1	0.10926	1	0.47078	1	0.22505	1	NA	NA	0.25746	1
18q loss	0 (0%)	294	0.016236	1	0.4762	1	0.63583	1	0.48644	1	0.23681	1	0.26216	1	0.21471	1	0.38316	1	0.52123	1	0.5861	1	0.019154	1	NA	NA	0.099109	1
19p loss	0 (0%)	288	0.056184	1	0.27979	1	0.081785	1	0.56157	1	0.82916	1	1	1	0.71469	1	0.44366	1	0.032622	1	0.28289	1	0.1353	1	NA	NA	0.017171	1
19q loss	0 (0%)	330	0.066864	1	0.49477	1	0.77873	1	0.0055871	1	0.4633	1	0.7435	1	0.45729	1	0.61189	1	0.01662	1	0.86832	1	0.040055	1	NA	NA	0.09181	1
20p loss	0 (0%)	336	0.065677	1	0.8955	1	0.88247	1	0.015092	1	0.68395	1	0.48744	1	0.63581	1	0.068597	1	0.37067	1	0.26667	1	1	1	NA	NA	0.523	1
20q loss	0 (0%)	368	0.18285	1	0.3455	1	0.8256	1	NA	NA	0.42546	1	0.61248	1	0.87097	1	0.25724	1	0.73035	1	0.90882	1	0.52457	1	NA	NA	0.57577	1
21q loss	0 (0%)	335	0.99957	1	0.28463	1	0.01819	1	0.12428	1	0.43936	1	1	1	0.29876	1	0.79996	1	0.85823	1	0.71487	1	0.63438	1	NA	NA	0.14574	1
22q loss	0 (0%)	310	0.54427	1	0.026283	1	0.057524	1	0.65676	1	0.78141	1	0.3812	1	0.18374	1	0.036238	1	0.039539	1	0.87872	1	0.21001	1	NA	NA	0.64646	1
Xq loss	0 (0%)	379	0.2751	1	0.065225	1	0.048551	1	NA	NA	0.015699	1	0.073053	1	0.30393	1	0.90913	1	0.91893	1	0.39679	1	1	1	NA	NA	0.0011424	1
