
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_cnvs_onlysig.4.4139/CNV2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_cnvs_onlysig.4.4139/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/421235/all_lesions.conf_99.cnv.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering_new/PRAD-TP/3536845/PRAD-TP.transferedmergedcluster.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=PRAD-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=PRAD-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=198, in cluster file=187, common to both=187
[1]  47 187
[1] "Amp Peak  1(1q21.3)"
[1] 3
      AMP PEAK  1(1Q21.3) CNV AMP PEAK  1(1Q21.3) WILD-TYPE 
                           12                           175 
      AMP PEAK  1(1Q21.3) CNV AMP PEAK  1(1Q21.3) WILD-TYPE 
                           12                           175 
[1] "Amp Peak  2(3q26.2)"
[1] 3
      AMP PEAK  2(3Q26.2) CNV AMP PEAK  2(3Q26.2) WILD-TYPE 
                           27                           160 
      AMP PEAK  2(3Q26.2) CNV AMP PEAK  2(3Q26.2) WILD-TYPE 
                           27                           160 
[1] "Amp Peak  3(7p15.3)"
[1] 3
      AMP PEAK  3(7P15.3) CNV AMP PEAK  3(7P15.3) WILD-TYPE 
                           35                           152 
      AMP PEAK  3(7P15.3) CNV AMP PEAK  3(7P15.3) WILD-TYPE 
                           35                           152 
[1] "Amp Peak  4(7q34)"
[1] 3
      AMP PEAK  4(7Q34) CNV AMP PEAK  4(7Q34) WILD-TYPE 
                         32                         155 
      AMP PEAK  4(7Q34) CNV AMP PEAK  4(7Q34) WILD-TYPE 
                         32                         155 
[1] "Amp Peak  5(8p11.22)"
[1] 3
      AMP PEAK  5(8P11.22) CNV AMP PEAK  5(8P11.22) WILD-TYPE 
                            17                            170 
      AMP PEAK  5(8P11.22) CNV AMP PEAK  5(8P11.22) WILD-TYPE 
                            17                            170 
[1] "Amp Peak  6(8q21.13)"
[1] 3
      AMP PEAK  6(8Q21.13) CNV AMP PEAK  6(8Q21.13) WILD-TYPE 
                            46                            141 
      AMP PEAK  6(8Q21.13) CNV AMP PEAK  6(8Q21.13) WILD-TYPE 
                            46                            141 
[1] "Amp Peak  7(11q13.2)"
[1] 3
      AMP PEAK  7(11Q13.2) CNV AMP PEAK  7(11Q13.2) WILD-TYPE 
                            11                            176 
      AMP PEAK  7(11Q13.2) CNV AMP PEAK  7(11Q13.2) WILD-TYPE 
                            11                            176 
[1] "Amp Peak  8(12q24.32)"
[1] 3
      AMP PEAK  8(12Q24.32) CNV AMP PEAK  8(12Q24.32) WILD-TYPE 
                              7                             180 
      AMP PEAK  8(12Q24.32) CNV AMP PEAK  8(12Q24.32) WILD-TYPE 
                              7                             180 
[1] "Amp Peak  9(14q21.1)"
[1] 3
      AMP PEAK  9(14Q21.1) CNV AMP PEAK  9(14Q21.1) WILD-TYPE 
                            10                            177 
      AMP PEAK  9(14Q21.1) CNV AMP PEAK  9(14Q21.1) WILD-TYPE 
                            10                            177 
[1] "Amp Peak 10(20q13.33)"
[1] 3
      AMP PEAK 10(20Q13.33) CNV AMP PEAK 10(20Q13.33) WILD-TYPE 
                             12                             175 
      AMP PEAK 10(20Q13.33) CNV AMP PEAK 10(20Q13.33) WILD-TYPE 
                             12                             175 
[1] "Amp Peak 11(21q21.3)"
[1] 3
      AMP PEAK 11(21Q21.3) CNV AMP PEAK 11(21Q21.3) WILD-TYPE 
                             7                            180 
      AMP PEAK 11(21Q21.3) CNV AMP PEAK 11(21Q21.3) WILD-TYPE 
                             7                            180 
[1] "Amp Peak 12(Xp22.11)"
[1] 3
      AMP PEAK 12(XP22.11) CNV AMP PEAK 12(XP22.11) WILD-TYPE 
                             5                            182 
      AMP PEAK 12(XP22.11) CNV AMP PEAK 12(XP22.11) WILD-TYPE 
                             5                            182 
[1] "Amp Peak 13(Xp22.11)"
[1] 3
      AMP PEAK 13(XP22.11) CNV AMP PEAK 13(XP22.11) WILD-TYPE 
                             5                            182 
      AMP PEAK 13(XP22.11) CNV AMP PEAK 13(XP22.11) WILD-TYPE 
                             5                            182 
[1] "Amp Peak 14(Xp21.1)"
[1] 3
      AMP PEAK 14(XP21.1) CNV AMP PEAK 14(XP21.1) WILD-TYPE 
                            4                           183 
      AMP PEAK 14(XP21.1) CNV AMP PEAK 14(XP21.1) WILD-TYPE 
                            4                           183 
[1] "Amp Peak 15(Xq12)"
[1] 3
      AMP PEAK 15(XQ12) CNV AMP PEAK 15(XQ12) WILD-TYPE 
                          4                         183 
      AMP PEAK 15(XQ12) CNV AMP PEAK 15(XQ12) WILD-TYPE 
                          4                         183 
[1] "Amp Peak 16(Xq21.1)"
[1] 3
      AMP PEAK 16(XQ21.1) CNV AMP PEAK 16(XQ21.1) WILD-TYPE 
                            7                           180 
      AMP PEAK 16(XQ21.1) CNV AMP PEAK 16(XQ21.1) WILD-TYPE 
                            7                           180 
[1] "Amp Peak 17(Xq21.1)"
[1] 3
      AMP PEAK 17(XQ21.1) CNV AMP PEAK 17(XQ21.1) WILD-TYPE 
                            5                           182 
      AMP PEAK 17(XQ21.1) CNV AMP PEAK 17(XQ21.1) WILD-TYPE 
                            5                           182 
[1] "Amp Peak 18(Xq21.31)"
[1] 3
      AMP PEAK 18(XQ21.31) CNV AMP PEAK 18(XQ21.31) WILD-TYPE 
                             5                            182 
      AMP PEAK 18(XQ21.31) CNV AMP PEAK 18(XQ21.31) WILD-TYPE 
                             5                            182 
[1] "Amp Peak 19(Xq25)"
[1] 3
      AMP PEAK 19(XQ25) CNV AMP PEAK 19(XQ25) WILD-TYPE 
                          4                         183 
      AMP PEAK 19(XQ25) CNV AMP PEAK 19(XQ25) WILD-TYPE 
                          4                         183 
[1] "Amp Peak 20(Xq25)"
[1] 3
      AMP PEAK 20(XQ25) CNV AMP PEAK 20(XQ25) WILD-TYPE 
                          6                         181 
      AMP PEAK 20(XQ25) CNV AMP PEAK 20(XQ25) WILD-TYPE 
                          6                         181 
[1] "Amp Peak 21(Xq27.1)"
[1] 3
      AMP PEAK 21(XQ27.1) CNV AMP PEAK 21(XQ27.1) WILD-TYPE 
                            9                           178 
      AMP PEAK 21(XQ27.1) CNV AMP PEAK 21(XQ27.1) WILD-TYPE 
                            9                           178 
[1] "Del Peak  1(1p31.3)"
[1] 3
      DEL PEAK  1(1P31.3) CNV DEL PEAK  1(1P31.3) WILD-TYPE 
                           22                           165 
      DEL PEAK  1(1P31.3) CNV DEL PEAK  1(1P31.3) WILD-TYPE 
                           22                           165 
[1] "Del Peak  2(1p21.3)"
[1] 3
      DEL PEAK  2(1P21.3) CNV DEL PEAK  2(1P21.3) WILD-TYPE 
                           16                           171 
      DEL PEAK  2(1P21.3) CNV DEL PEAK  2(1P21.3) WILD-TYPE 
                           16                           171 
[1] "Del Peak  3(1q23.1)"
[1] 3
      DEL PEAK  3(1Q23.1) CNV DEL PEAK  3(1Q23.1) WILD-TYPE 
                            8                           179 
      DEL PEAK  3(1Q23.1) CNV DEL PEAK  3(1Q23.1) WILD-TYPE 
                            8                           179 
[1] "Del Peak  4(1q42.13)"
[1] 3
      DEL PEAK  4(1Q42.13) CNV DEL PEAK  4(1Q42.13) WILD-TYPE 
                            18                            169 
      DEL PEAK  4(1Q42.13) CNV DEL PEAK  4(1Q42.13) WILD-TYPE 
                            18                            169 
[1] "Del Peak  5(2q22.1)"
[1] 3
      DEL PEAK  5(2Q22.1) CNV DEL PEAK  5(2Q22.1) WILD-TYPE 
                           22                           165 
      DEL PEAK  5(2Q22.1) CNV DEL PEAK  5(2Q22.1) WILD-TYPE 
                           22                           165 
[1] "Del Peak  6(3p13)"
[1] 3
      DEL PEAK  6(3P13) CNV DEL PEAK  6(3P13) WILD-TYPE 
                         28                         159 
      DEL PEAK  6(3P13) CNV DEL PEAK  6(3P13) WILD-TYPE 
                         28                         159 
[1] "Del Peak  7(3q29)"
[1] 3
      DEL PEAK  7(3Q29) CNV DEL PEAK  7(3Q29) WILD-TYPE 
                         12                         175 
      DEL PEAK  7(3Q29) CNV DEL PEAK  7(3Q29) WILD-TYPE 
                         12                         175 
[1] "Del Peak  8(4q28.2)"
[1] 3
      DEL PEAK  8(4Q28.2) CNV DEL PEAK  8(4Q28.2) WILD-TYPE 
                           17                           170 
      DEL PEAK  8(4Q28.2) CNV DEL PEAK  8(4Q28.2) WILD-TYPE 
                           17                           170 
[1] "Del Peak  9(5q11.2)"
[1] 3
      DEL PEAK  9(5Q11.2) CNV DEL PEAK  9(5Q11.2) WILD-TYPE 
                           30                           157 
      DEL PEAK  9(5Q11.2) CNV DEL PEAK  9(5Q11.2) WILD-TYPE 
                           30                           157 
[1] "Del Peak 10(5q21.1)"
[1] 3
      DEL PEAK 10(5Q21.1) CNV DEL PEAK 10(5Q21.1) WILD-TYPE 
                           33                           154 
      DEL PEAK 10(5Q21.1) CNV DEL PEAK 10(5Q21.1) WILD-TYPE 
                           33                           154 
[1] "Del Peak 11(6q15)"
[1] 3
      DEL PEAK 11(6Q15) CNV DEL PEAK 11(6Q15) WILD-TYPE 
                         59                         128 
      DEL PEAK 11(6Q15) CNV DEL PEAK 11(6Q15) WILD-TYPE 
                         59                         128 
[1] "Del Peak 12(7q36.1)"
[1] 3
      DEL PEAK 12(7Q36.1) CNV DEL PEAK 12(7Q36.1) WILD-TYPE 
                            9                           178 
      DEL PEAK 12(7Q36.1) CNV DEL PEAK 12(7Q36.1) WILD-TYPE 
                            9                           178 
[1] "Del Peak 13(8p21.3)"
[1] 3
      DEL PEAK 13(8P21.3) CNV DEL PEAK 13(8P21.3) WILD-TYPE 
                          108                            79 
      DEL PEAK 13(8P21.3) CNV DEL PEAK 13(8P21.3) WILD-TYPE 
                          108                            79 
[1] "Del Peak 14(8p11.21)"
[1] 3
      DEL PEAK 14(8P11.21) CNV DEL PEAK 14(8P11.21) WILD-TYPE 
                            59                            128 
      DEL PEAK 14(8P11.21) CNV DEL PEAK 14(8P11.21) WILD-TYPE 
                            59                            128 
[1] "Del Peak 15(9p22.3)"
[1] 3
      DEL PEAK 15(9P22.3) CNV DEL PEAK 15(9P22.3) WILD-TYPE 
                           15                           172 
      DEL PEAK 15(9P22.3) CNV DEL PEAK 15(9P22.3) WILD-TYPE 
                           15                           172 
[1] "Del Peak 16(10q23.31)"
[1] 3
      DEL PEAK 16(10Q23.31) CNV DEL PEAK 16(10Q23.31) WILD-TYPE 
                             65                             122 
      DEL PEAK 16(10Q23.31) CNV DEL PEAK 16(10Q23.31) WILD-TYPE 
                             65                             122 
[1] "Del Peak 17(11q23.2)"
[1] 3
      DEL PEAK 17(11Q23.2) CNV DEL PEAK 17(11Q23.2) WILD-TYPE 
                            23                            164 
      DEL PEAK 17(11Q23.2) CNV DEL PEAK 17(11Q23.2) WILD-TYPE 
                            23                            164 
[1] "Del Peak 18(12p13.2)"
[1] 3
      DEL PEAK 18(12P13.2) CNV DEL PEAK 18(12P13.2) WILD-TYPE 
                            39                            148 
      DEL PEAK 18(12P13.2) CNV DEL PEAK 18(12P13.2) WILD-TYPE 
                            39                            148 
[1] "Del Peak 19(13q14.13)"
[1] 3
      DEL PEAK 19(13Q14.13) CNV DEL PEAK 19(13Q14.13) WILD-TYPE 
                             83                             104 
      DEL PEAK 19(13Q14.13) CNV DEL PEAK 19(13Q14.13) WILD-TYPE 
                             83                             104 
[1] "Del Peak 20(16q24.1)"
[1] 3
      DEL PEAK 20(16Q24.1) CNV DEL PEAK 20(16Q24.1) WILD-TYPE 
                            74                            113 
      DEL PEAK 20(16Q24.1) CNV DEL PEAK 20(16Q24.1) WILD-TYPE 
                            74                            113 
[1] "Del Peak 21(17p13.1)"
[1] 3
      DEL PEAK 21(17P13.1) CNV DEL PEAK 21(17P13.1) WILD-TYPE 
                            46                            141 
      DEL PEAK 21(17P13.1) CNV DEL PEAK 21(17P13.1) WILD-TYPE 
                            46                            141 
[1] "Del Peak 22(17q21.31)"
[1] 3
      DEL PEAK 22(17Q21.31) CNV DEL PEAK 22(17Q21.31) WILD-TYPE 
                             36                             151 
      DEL PEAK 22(17Q21.31) CNV DEL PEAK 22(17Q21.31) WILD-TYPE 
                             36                             151 
[1] "Del Peak 23(18q22.1)"
[1] 3
      DEL PEAK 23(18Q22.1) CNV DEL PEAK 23(18Q22.1) WILD-TYPE 
                            46                            141 
      DEL PEAK 23(18Q22.1) CNV DEL PEAK 23(18Q22.1) WILD-TYPE 
                            46                            141 
[1] "Del Peak 24(18q23)"
[1] 3
      DEL PEAK 24(18Q23) CNV DEL PEAK 24(18Q23) WILD-TYPE 
                          52                          135 
      DEL PEAK 24(18Q23) CNV DEL PEAK 24(18Q23) WILD-TYPE 
                          52                          135 
[1] "Del Peak 25(21q22.2)"
[1] 3
      DEL PEAK 25(21Q22.2) CNV DEL PEAK 25(21Q22.2) WILD-TYPE 
                            61                            126 
      DEL PEAK 25(21Q22.2) CNV DEL PEAK 25(21Q22.2) WILD-TYPE 
                            61                            126 
[1] "Del Peak 26(21q22.3)"
[1] 3
      DEL PEAK 26(21Q22.3) CNV DEL PEAK 26(21Q22.3) WILD-TYPE 
                            60                            127 
      DEL PEAK 26(21Q22.3) CNV DEL PEAK 26(21Q22.3) WILD-TYPE 
                            60                            127 
[1] "data2feature, selection=ALL"
[1] "CN_CNMF"                     "METHLYATION_CNMF"           
[3] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
[5] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[7] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 8 rows and 187 columns.

Variable 1:'CN_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'MRNASEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MIRSEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MIRSEQ_MATURE_CNMF':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
[1] "CN_CNMF"                     "METHLYATION_CNMF"           
[3] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
[5] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[7] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 187 columns, 0 survival variables, and 8 non-survival variables.
CN_CNMF, nv=4, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=5, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = Amp Peak  1(1q21.3)
D1V1, multiclass
        clus
vv       AMP PEAK  1(1Q21.3) CNV AMP PEAK  1(1Q21.3) WILD-TYPE
  CLUS_1                       1                            33
  CLUS_2                       2                            90
  CLUS_3                       9                            50
  CLUS_4                       0                             2
D1V2, multiclass
        clus
vv       AMP PEAK  1(1Q21.3) CNV AMP PEAK  1(1Q21.3) WILD-TYPE
  CLUS_1                       4                            53
  CLUS_2                       6                            51
  CLUS_3                       1                            54
  CLUS_4                       1                            17
D1V3, multiclass
        clus
vv       AMP PEAK  1(1Q21.3) CNV AMP PEAK  1(1Q21.3) WILD-TYPE
  CLUS_1                       3                            56
  CLUS_2                       1                            52
  CLUS_3                       7                            56
D1V4, multiclass
        clus
vv       AMP PEAK  1(1Q21.3) CNV AMP PEAK  1(1Q21.3) WILD-TYPE
  CLUS_1                       2                            47
  CLUS_2                       8                            67
  CLUS_3                       1                            50
D1V5, multiclass
        clus
vv       AMP PEAK  1(1Q21.3) CNV AMP PEAK  1(1Q21.3) WILD-TYPE
  CLUS_1                       6                            46
  CLUS_2                       1                            50
  CLUS_3                       1                            27
  CLUS_4                       4                            51
D1V6, multiclass
        clus
vv       AMP PEAK  1(1Q21.3) CNV AMP PEAK  1(1Q21.3) WILD-TYPE
  CLUS_1                       1                            31
  CLUS_2                       3                            61
  CLUS_3                       8                            82
D1V7, multiclass
D1V8, multiclass
        clus
vv       AMP PEAK  1(1Q21.3) CNV AMP PEAK  1(1Q21.3) WILD-TYPE
  CLUS_1                       0                             4
  CLUS_2                       6                            79
  CLUS_3                       6                            91

Clustering(2) Variable = Amp Peak  2(3q26.2)
D2V1, multiclass
        clus
vv       AMP PEAK  2(3Q26.2) CNV AMP PEAK  2(3Q26.2) WILD-TYPE
  CLUS_1                       7                            27
  CLUS_2                       4                            88
  CLUS_3                      16                            43
  CLUS_4                       0                             2
D2V2, multiclass
        clus
vv       AMP PEAK  2(3Q26.2) CNV AMP PEAK  2(3Q26.2) WILD-TYPE
  CLUS_1                      12                            45
  CLUS_2                       7                            50
  CLUS_3                       6                            49
  CLUS_4                       2                            16
D2V3, multiclass
        clus
vv       AMP PEAK  2(3Q26.2) CNV AMP PEAK  2(3Q26.2) WILD-TYPE
  CLUS_1                      12                            47
  CLUS_2                       6                            47
  CLUS_3                       7                            56
D2V4, multiclass
        clus
vv       AMP PEAK  2(3Q26.2) CNV AMP PEAK  2(3Q26.2) WILD-TYPE
  CLUS_1                       9                            40
  CLUS_2                      11                            64
  CLUS_3                       5                            46
D2V5, multiclass
        clus
vv       AMP PEAK  2(3Q26.2) CNV AMP PEAK  2(3Q26.2) WILD-TYPE
  CLUS_1                       8                            44
  CLUS_2                       7                            44
  CLUS_3                       6                            22
  CLUS_4                       5                            50
D2V6, multiclass
        clus
vv       AMP PEAK  2(3Q26.2) CNV AMP PEAK  2(3Q26.2) WILD-TYPE
  CLUS_1                       7                            25
  CLUS_2                      10                            54
  CLUS_3                       9                            81
D2V7, multiclass
D2V8, multiclass
        clus
vv       AMP PEAK  2(3Q26.2) CNV AMP PEAK  2(3Q26.2) WILD-TYPE
  CLUS_1                       0                             4
  CLUS_2                      16                            69
  CLUS_3                      10                            87

Clustering(3) Variable = Amp Peak  3(7p15.3)
D3V1, multiclass
        clus
vv       AMP PEAK  3(7P15.3) CNV AMP PEAK  3(7P15.3) WILD-TYPE
  CLUS_1                       5                            29
  CLUS_2                       6                            86
  CLUS_3                      23                            36
  CLUS_4                       1                             1
D3V2, multiclass
        clus
vv       AMP PEAK  3(7P15.3) CNV AMP PEAK  3(7P15.3) WILD-TYPE
  CLUS_1                      17                            40
  CLUS_2                      10                            47
  CLUS_3                       5                            50
  CLUS_4                       3                            15
D3V3, multiclass
        clus
vv       AMP PEAK  3(7P15.3) CNV AMP PEAK  3(7P15.3) WILD-TYPE
  CLUS_1                      18                            41
  CLUS_2                       4                            49
  CLUS_3                      11                            52
D3V4, multiclass
        clus
vv       AMP PEAK  3(7P15.3) CNV AMP PEAK  3(7P15.3) WILD-TYPE
  CLUS_1                      16                            33
  CLUS_2                      12                            63
  CLUS_3                       5                            46
D3V5, multiclass
        clus
vv       AMP PEAK  3(7P15.3) CNV AMP PEAK  3(7P15.3) WILD-TYPE
  CLUS_1                      12                            40
  CLUS_2                       6                            45
  CLUS_3                       4                            24
  CLUS_4                      12                            43
D3V6, multiclass
        clus
vv       AMP PEAK  3(7P15.3) CNV AMP PEAK  3(7P15.3) WILD-TYPE
  CLUS_1                       5                            27
  CLUS_2                      11                            53
  CLUS_3                      18                            72
D3V7, multiclass
D3V8, multiclass
        clus
vv       AMP PEAK  3(7P15.3) CNV AMP PEAK  3(7P15.3) WILD-TYPE
  CLUS_1                       2                             2
  CLUS_2                      14                            71
  CLUS_3                      18                            79

Clustering(4) Variable = Amp Peak  4(7q34)
D4V1, multiclass
        clus
vv       AMP PEAK  4(7Q34) CNV AMP PEAK  4(7Q34) WILD-TYPE
  CLUS_1                     6                          28
  CLUS_2                     6                          86
  CLUS_3                    19                          40
  CLUS_4                     1                           1
D4V2, multiclass
        clus
vv       AMP PEAK  4(7Q34) CNV AMP PEAK  4(7Q34) WILD-TYPE
  CLUS_1                    17                          40
  CLUS_2                     8                          49
  CLUS_3                     4                          51
  CLUS_4                     3                          15
D4V3, multiclass
        clus
vv       AMP PEAK  4(7Q34) CNV AMP PEAK  4(7Q34) WILD-TYPE
  CLUS_1                    18                          41
  CLUS_2                     3                          50
  CLUS_3                     9                          54
D4V4, multiclass
        clus
vv       AMP PEAK  4(7Q34) CNV AMP PEAK  4(7Q34) WILD-TYPE
  CLUS_1                    17                          32
  CLUS_2                     9                          66
  CLUS_3                     4                          47
D4V5, multiclass
        clus
vv       AMP PEAK  4(7Q34) CNV AMP PEAK  4(7Q34) WILD-TYPE
  CLUS_1                    13                          39
  CLUS_2                     5                          46
  CLUS_3                     4                          24
  CLUS_4                     9                          46
D4V6, multiclass
        clus
vv       AMP PEAK  4(7Q34) CNV AMP PEAK  4(7Q34) WILD-TYPE
  CLUS_1                     5                          27
  CLUS_2                     9                          55
  CLUS_3                    17                          73
D4V7, multiclass
D4V8, multiclass
        clus
vv       AMP PEAK  4(7Q34) CNV AMP PEAK  4(7Q34) WILD-TYPE
  CLUS_1                     2                           2
  CLUS_2                    14                          71
  CLUS_3                    15                          82

Clustering(5) Variable = Amp Peak  5(8p11.22)
D5V1, multiclass
        clus
vv       AMP PEAK  5(8P11.22) CNV AMP PEAK  5(8P11.22) WILD-TYPE
  CLUS_1                        2                             32
  CLUS_2                        1                             91
  CLUS_3                       13                             46
  CLUS_4                        1                              1
D5V2, multiclass
        clus
vv       AMP PEAK  5(8P11.22) CNV AMP PEAK  5(8P11.22) WILD-TYPE
  CLUS_1                        9                             48
  CLUS_2                        5                             52
  CLUS_3                        2                             53
  CLUS_4                        1                             17
D5V3, multiclass
        clus
vv       AMP PEAK  5(8P11.22) CNV AMP PEAK  5(8P11.22) WILD-TYPE
  CLUS_1                       10                             49
  CLUS_2                        3                             50
  CLUS_3                        3                             60
D5V4, multiclass
        clus
vv       AMP PEAK  5(8P11.22) CNV AMP PEAK  5(8P11.22) WILD-TYPE
  CLUS_1                        6                             43
  CLUS_2                        8                             67
  CLUS_3                        2                             49
D5V5, multiclass
        clus
vv       AMP PEAK  5(8P11.22) CNV AMP PEAK  5(8P11.22) WILD-TYPE
  CLUS_1                        7                             45
  CLUS_2                        2                             49
  CLUS_3                        1                             27
  CLUS_4                        6                             49
D5V6, multiclass
        clus
vv       AMP PEAK  5(8P11.22) CNV AMP PEAK  5(8P11.22) WILD-TYPE
  CLUS_1                        3                             29
  CLUS_2                        3                             61
  CLUS_3                       10                             80
D5V7, multiclass
D5V8, multiclass
        clus
vv       AMP PEAK  5(8P11.22) CNV AMP PEAK  5(8P11.22) WILD-TYPE
  CLUS_1                        0                              4
  CLUS_2                        8                             77
  CLUS_3                        8                             89

Clustering(6) Variable = Amp Peak  6(8q21.13)
D6V1, multiclass
        clus
vv       AMP PEAK  6(8Q21.13) CNV AMP PEAK  6(8Q21.13) WILD-TYPE
  CLUS_1                        6                             28
  CLUS_2                        7                             85
  CLUS_3                       32                             27
  CLUS_4                        1                              1
D6V2, multiclass
        clus
vv       AMP PEAK  6(8Q21.13) CNV AMP PEAK  6(8Q21.13) WILD-TYPE
  CLUS_1                       24                             33
  CLUS_2                       13                             44
  CLUS_3                        5                             50
  CLUS_4                        4                             14
D6V3, multiclass
        clus
vv       AMP PEAK  6(8Q21.13) CNV AMP PEAK  6(8Q21.13) WILD-TYPE
  CLUS_1                       24                             35
  CLUS_2                        6                             47
  CLUS_3                       14                             49
D6V4, multiclass
        clus
vv       AMP PEAK  6(8Q21.13) CNV AMP PEAK  6(8Q21.13) WILD-TYPE
  CLUS_1                       19                             30
  CLUS_2                       19                             56
  CLUS_3                        6                             45
D6V5, multiclass
        clus
vv       AMP PEAK  6(8Q21.13) CNV AMP PEAK  6(8Q21.13) WILD-TYPE
  CLUS_1                       18                             34
  CLUS_2                        7                             44
  CLUS_3                        5                             23
  CLUS_4                       15                             40
D6V6, multiclass
        clus
vv       AMP PEAK  6(8Q21.13) CNV AMP PEAK  6(8Q21.13) WILD-TYPE
  CLUS_1                        8                             24
  CLUS_2                        9                             55
  CLUS_3                       28                             62
D6V7, multiclass
D6V8, multiclass
        clus
vv       AMP PEAK  6(8Q21.13) CNV AMP PEAK  6(8Q21.13) WILD-TYPE
  CLUS_1                        0                              4
  CLUS_2                       22                             63
  CLUS_3                       23                             74

Clustering(7) Variable = Amp Peak  7(11q13.2)
D7V1, multiclass
        clus
vv       AMP PEAK  7(11Q13.2) CNV AMP PEAK  7(11Q13.2) WILD-TYPE
  CLUS_1                        0                             34
  CLUS_2                        1                             91
  CLUS_3                       10                             49
  CLUS_4                        0                              2
D7V2, multiclass
        clus
vv       AMP PEAK  7(11Q13.2) CNV AMP PEAK  7(11Q13.2) WILD-TYPE
  CLUS_1                        5                             52
  CLUS_2                        4                             53
  CLUS_3                        1                             54
  CLUS_4                        1                             17
D7V3, multiclass
        clus
vv       AMP PEAK  7(11Q13.2) CNV AMP PEAK  7(11Q13.2) WILD-TYPE
  CLUS_1                        6                             53
  CLUS_2                        1                             52
  CLUS_3                        3                             60
D7V4, multiclass
        clus
vv       AMP PEAK  7(11Q13.2) CNV AMP PEAK  7(11Q13.2) WILD-TYPE
  CLUS_1                        4                             45
  CLUS_2                        5                             70
  CLUS_3                        1                             50
D7V5, multiclass
        clus
vv       AMP PEAK  7(11Q13.2) CNV AMP PEAK  7(11Q13.2) WILD-TYPE
  CLUS_1                        4                             48
  CLUS_2                        2                             49
  CLUS_3                        1                             27
  CLUS_4                        3                             52
D7V6, multiclass
        clus
vv       AMP PEAK  7(11Q13.2) CNV AMP PEAK  7(11Q13.2) WILD-TYPE
  CLUS_1                        2                             30
  CLUS_2                        2                             62
  CLUS_3                        6                             84
D7V7, multiclass
D7V8, multiclass
        clus
vv       AMP PEAK  7(11Q13.2) CNV AMP PEAK  7(11Q13.2) WILD-TYPE
  CLUS_1                        0                              4
  CLUS_2                        4                             81
  CLUS_3                        6                             91

Clustering(8) Variable = Amp Peak  8(12q24.32)
D8V1, multiclass
        clus
vv       AMP PEAK  8(12Q24.32) CNV AMP PEAK  8(12Q24.32) WILD-TYPE
  CLUS_1                         0                              34
  CLUS_2                         0                              92
  CLUS_3                         7                              52
  CLUS_4                         0                               2
D8V2, multiclass
        clus
vv       AMP PEAK  8(12Q24.32) CNV AMP PEAK  8(12Q24.32) WILD-TYPE
  CLUS_1                         4                              53
  CLUS_2                         1                              56
  CLUS_3                         2                              53
  CLUS_4                         0                              18
D8V3, multiclass
        clus
vv       AMP PEAK  8(12Q24.32) CNV AMP PEAK  8(12Q24.32) WILD-TYPE
  CLUS_1                         3                              56
  CLUS_2                         2                              51
  CLUS_3                         2                              61
D8V4, multiclass
        clus
vv       AMP PEAK  8(12Q24.32) CNV AMP PEAK  8(12Q24.32) WILD-TYPE
  CLUS_1                         0                              49
  CLUS_2                         5                              70
  CLUS_3                         2                              49
D8V5, multiclass
        clus
vv       AMP PEAK  8(12Q24.32) CNV AMP PEAK  8(12Q24.32) WILD-TYPE
  CLUS_1                         2                              50
  CLUS_2                         2                              49
  CLUS_3                         1                              27
  CLUS_4                         1                              54
D8V6, multiclass
        clus
vv       AMP PEAK  8(12Q24.32) CNV AMP PEAK  8(12Q24.32) WILD-TYPE
  CLUS_1                         1                              31
  CLUS_2                         3                              61
  CLUS_3                         2                              88
D8V7, multiclass
D8V8, multiclass
        clus
vv       AMP PEAK  8(12Q24.32) CNV AMP PEAK  8(12Q24.32) WILD-TYPE
  CLUS_1                         0                               4
  CLUS_2                         5                              80
  CLUS_3                         1                              96

Clustering(9) Variable = Amp Peak  9(14q21.1)
D9V1, multiclass
        clus
vv       AMP PEAK  9(14Q21.1) CNV AMP PEAK  9(14Q21.1) WILD-TYPE
  CLUS_1                        3                             31
  CLUS_2                        1                             91
  CLUS_3                        6                             53
  CLUS_4                        0                              2
D9V2, multiclass
        clus
vv       AMP PEAK  9(14Q21.1) CNV AMP PEAK  9(14Q21.1) WILD-TYPE
  CLUS_1                        7                             50
  CLUS_2                        0                             57
  CLUS_3                        1                             54
  CLUS_4                        2                             16
D9V3, multiclass
        clus
vv       AMP PEAK  9(14Q21.1) CNV AMP PEAK  9(14Q21.1) WILD-TYPE
  CLUS_1                        7                             52
  CLUS_2                        0                             53
  CLUS_3                        2                             61
D9V4, multiclass
        clus
vv       AMP PEAK  9(14Q21.1) CNV AMP PEAK  9(14Q21.1) WILD-TYPE
  CLUS_1                        3                             46
  CLUS_2                        5                             70
  CLUS_3                        1                             50
D9V5, multiclass
        clus
vv       AMP PEAK  9(14Q21.1) CNV AMP PEAK  9(14Q21.1) WILD-TYPE
  CLUS_1                        4                             48
  CLUS_2                        2                             49
  CLUS_3                        3                             25
  CLUS_4                        1                             54
D9V6, multiclass
        clus
vv       AMP PEAK  9(14Q21.1) CNV AMP PEAK  9(14Q21.1) WILD-TYPE
  CLUS_1                        3                             29
  CLUS_2                        1                             63
  CLUS_3                        6                             84
D9V7, multiclass
D9V8, multiclass
        clus
vv       AMP PEAK  9(14Q21.1) CNV AMP PEAK  9(14Q21.1) WILD-TYPE
  CLUS_1                        1                              3
  CLUS_2                        6                             79
  CLUS_3                        3                             94

Clustering(10) Variable = Amp Peak 10(20q13.33)
D10V1, multiclass
        clus
vv       AMP PEAK 10(20Q13.33) CNV AMP PEAK 10(20Q13.33) WILD-TYPE
  CLUS_1                         2                              32
  CLUS_2                         1                              91
  CLUS_3                         9                              50
  CLUS_4                         0                               2
D10V2, multiclass
        clus
vv       AMP PEAK 10(20Q13.33) CNV AMP PEAK 10(20Q13.33) WILD-TYPE
  CLUS_1                         9                              48
  CLUS_2                         0                              57
  CLUS_3                         1                              54
  CLUS_4                         2                              16
D10V3, multiclass
        clus
vv       AMP PEAK 10(20Q13.33) CNV AMP PEAK 10(20Q13.33) WILD-TYPE
  CLUS_1                         9                              50
  CLUS_2                         1                              52
  CLUS_3                         2                              61
D10V4, multiclass
        clus
vv       AMP PEAK 10(20Q13.33) CNV AMP PEAK 10(20Q13.33) WILD-TYPE
  CLUS_1                         8                              41
  CLUS_2                         3                              72
  CLUS_3                         1                              50
D10V5, multiclass
        clus
vv       AMP PEAK 10(20Q13.33) CNV AMP PEAK 10(20Q13.33) WILD-TYPE
  CLUS_1                         3                              49
  CLUS_2                         2                              49
  CLUS_3                         3                              25
  CLUS_4                         4                              51
D10V6, multiclass
        clus
vv       AMP PEAK 10(20Q13.33) CNV AMP PEAK 10(20Q13.33) WILD-TYPE
  CLUS_1                         4                              28
  CLUS_2                         1                              63
  CLUS_3                         7                              83
D10V7, multiclass
D10V8, multiclass
        clus
vv       AMP PEAK 10(20Q13.33) CNV AMP PEAK 10(20Q13.33) WILD-TYPE
  CLUS_1                         0                               4
  CLUS_2                         6                              79
  CLUS_3                         6                              91

Clustering(11) Variable = Amp Peak 11(21q21.3)
D11V1, multiclass
        clus
vv       AMP PEAK 11(21Q21.3) CNV AMP PEAK 11(21Q21.3) WILD-TYPE
  CLUS_1                        0                             34
  CLUS_2                        1                             91
  CLUS_3                        6                             53
  CLUS_4                        0                              2
D11V2, multiclass
        clus
vv       AMP PEAK 11(21Q21.3) CNV AMP PEAK 11(21Q21.3) WILD-TYPE
  CLUS_1                        3                             54
  CLUS_2                        4                             53
  CLUS_3                        0                             55
  CLUS_4                        0                             18
D11V3, multiclass
        clus
vv       AMP PEAK 11(21Q21.3) CNV AMP PEAK 11(21Q21.3) WILD-TYPE
  CLUS_1                        2                             57
  CLUS_2                        0                             53
  CLUS_3                        4                             59
D11V4, multiclass
        clus
vv       AMP PEAK 11(21Q21.3) CNV AMP PEAK 11(21Q21.3) WILD-TYPE
  CLUS_1                        2                             47
  CLUS_2                        4                             71
  CLUS_3                        0                             51
D11V5, multiclass
        clus
vv       AMP PEAK 11(21Q21.3) CNV AMP PEAK 11(21Q21.3) WILD-TYPE
  CLUS_1                        2                             50
  CLUS_2                        1                             50
  CLUS_3                        0                             28
  CLUS_4                        4                             51
D11V6, multiclass
        clus
vv       AMP PEAK 11(21Q21.3) CNV AMP PEAK 11(21Q21.3) WILD-TYPE
  CLUS_1                        0                             32
  CLUS_2                        2                             62
  CLUS_3                        5                             85
D11V7, multiclass
D11V8, multiclass
        clus
vv       AMP PEAK 11(21Q21.3) CNV AMP PEAK 11(21Q21.3) WILD-TYPE
  CLUS_1                        0                              4
  CLUS_2                        2                             83
  CLUS_3                        5                             92

Clustering(12) Variable = Amp Peak 12(Xp22.11)
D12V1, multiclass
        clus
vv       AMP PEAK 12(XP22.11) CNV AMP PEAK 12(XP22.11) WILD-TYPE
  CLUS_1                        1                             33
  CLUS_2                        1                             91
  CLUS_3                        3                             56
  CLUS_4                        0                              2
D12V2, multiclass
        clus
vv       AMP PEAK 12(XP22.11) CNV AMP PEAK 12(XP22.11) WILD-TYPE
  CLUS_1                        2                             55
  CLUS_2                        1                             56
  CLUS_3                        1                             54
  CLUS_4                        1                             17
D12V3, multiclass
        clus
vv       AMP PEAK 12(XP22.11) CNV AMP PEAK 12(XP22.11) WILD-TYPE
  CLUS_1                        2                             57
  CLUS_2                        2                             51
  CLUS_3                        1                             62
D12V4, multiclass
        clus
vv       AMP PEAK 12(XP22.11) CNV AMP PEAK 12(XP22.11) WILD-TYPE
  CLUS_1                        2                             47
  CLUS_2                        1                             74
  CLUS_3                        2                             49
D12V5, multiclass
        clus
vv       AMP PEAK 12(XP22.11) CNV AMP PEAK 12(XP22.11) WILD-TYPE
  CLUS_1                        1                             51
  CLUS_2                        1                             50
  CLUS_3                        0                             28
  CLUS_4                        3                             52
D12V6, multiclass
        clus
vv       AMP PEAK 12(XP22.11) CNV AMP PEAK 12(XP22.11) WILD-TYPE
  CLUS_1                        0                             32
  CLUS_2                        0                             64
  CLUS_3                        5                             85
D12V7, multiclass
D12V8, multiclass
        clus
vv       AMP PEAK 12(XP22.11) CNV AMP PEAK 12(XP22.11) WILD-TYPE
  CLUS_1                        0                              4
  CLUS_2                        0                             85
  CLUS_3                        5                             92

Clustering(13) Variable = Amp Peak 13(Xp22.11)
D13V1, multiclass
        clus
vv       AMP PEAK 13(XP22.11) CNV AMP PEAK 13(XP22.11) WILD-TYPE
  CLUS_1                        0                             34
  CLUS_2                        3                             89
  CLUS_3                        2                             57
  CLUS_4                        0                              2
D13V2, multiclass
        clus
vv       AMP PEAK 13(XP22.11) CNV AMP PEAK 13(XP22.11) WILD-TYPE
  CLUS_1                        2                             55
  CLUS_2                        0                             57
  CLUS_3                        2                             53
  CLUS_4                        1                             17
D13V3, multiclass
        clus
vv       AMP PEAK 13(XP22.11) CNV AMP PEAK 13(XP22.11) WILD-TYPE
  CLUS_1                        2                             57
  CLUS_2                        1                             52
  CLUS_3                        2                             61
D13V4, multiclass
        clus
vv       AMP PEAK 13(XP22.11) CNV AMP PEAK 13(XP22.11) WILD-TYPE
  CLUS_1                        2                             47
  CLUS_2                        2                             73
  CLUS_3                        1                             50
D13V5, multiclass
        clus
vv       AMP PEAK 13(XP22.11) CNV AMP PEAK 13(XP22.11) WILD-TYPE
  CLUS_1                        1                             51
  CLUS_2                        1                             50
  CLUS_3                        2                             26
  CLUS_4                        1                             54
D13V6, multiclass
        clus
vv       AMP PEAK 13(XP22.11) CNV AMP PEAK 13(XP22.11) WILD-TYPE
  CLUS_1                        2                             30
  CLUS_2                        1                             63
  CLUS_3                        2                             88
D13V7, multiclass
D13V8, multiclass
        clus
vv       AMP PEAK 13(XP22.11) CNV AMP PEAK 13(XP22.11) WILD-TYPE
  CLUS_1                        0                              4
  CLUS_2                        3                             82
  CLUS_3                        2                             95

Clustering(14) Variable = Amp Peak 14(Xp21.1)
D14V1, multiclass
        clus
vv       AMP PEAK 14(XP21.1) CNV AMP PEAK 14(XP21.1) WILD-TYPE
  CLUS_1                       0                            34
  CLUS_2                       2                            90
  CLUS_3                       2                            57
  CLUS_4                       0                             2
D14V2, multiclass
        clus
vv       AMP PEAK 14(XP21.1) CNV AMP PEAK 14(XP21.1) WILD-TYPE
  CLUS_1                       1                            56
  CLUS_2                       1                            56
  CLUS_3                       0                            55
  CLUS_4                       2                            16
D14V3, multiclass
        clus
vv       AMP PEAK 14(XP21.1) CNV AMP PEAK 14(XP21.1) WILD-TYPE
  CLUS_1                       1                            58
  CLUS_2                       1                            52
  CLUS_3                       2                            61
D14V4, multiclass
        clus
vv       AMP PEAK 14(XP21.1) CNV AMP PEAK 14(XP21.1) WILD-TYPE
  CLUS_1                       1                            48
  CLUS_2                       2                            73
  CLUS_3                       1                            50
D14V5, multiclass
        clus
vv       AMP PEAK 14(XP21.1) CNV AMP PEAK 14(XP21.1) WILD-TYPE
  CLUS_1                       1                            51
  CLUS_2                       2                            49
  CLUS_3                       1                            27
  CLUS_4                       0                            55
D14V6, multiclass
        clus
vv       AMP PEAK 14(XP21.1) CNV AMP PEAK 14(XP21.1) WILD-TYPE
  CLUS_1                       1                            31
  CLUS_2                       2                            62
  CLUS_3                       1                            89
D14V7, multiclass
D14V8, multiclass
        clus
vv       AMP PEAK 14(XP21.1) CNV AMP PEAK 14(XP21.1) WILD-TYPE
  CLUS_1                       0                             4
  CLUS_2                       3                            82
  CLUS_3                       1                            96

Clustering(15) Variable = Amp Peak 15(Xq12)
D15V1, multiclass
        clus
vv       AMP PEAK 15(XQ12) CNV AMP PEAK 15(XQ12) WILD-TYPE
  CLUS_1                     0                          34
  CLUS_2                     1                          91
  CLUS_3                     3                          56
  CLUS_4                     0                           2
D15V2, multiclass
        clus
vv       AMP PEAK 15(XQ12) CNV AMP PEAK 15(XQ12) WILD-TYPE
  CLUS_1                     3                          54
  CLUS_2                     1                          56
  CLUS_3                     0                          55
  CLUS_4                     0                          18
D15V3, multiclass
        clus
vv       AMP PEAK 15(XQ12) CNV AMP PEAK 15(XQ12) WILD-TYPE
  CLUS_1                     3                          56
  CLUS_2                     0                          53
  CLUS_3                     0                          63
D15V4, multiclass
        clus
vv       AMP PEAK 15(XQ12) CNV AMP PEAK 15(XQ12) WILD-TYPE
  CLUS_1                     3                          46
  CLUS_2                     0                          75
  CLUS_3                     0                          51
D15V5, multiclass
        clus
vv       AMP PEAK 15(XQ12) CNV AMP PEAK 15(XQ12) WILD-TYPE
  CLUS_1                     2                          50
  CLUS_2                     0                          51
  CLUS_3                     1                          27
  CLUS_4                     1                          54
D15V6, multiclass
        clus
vv       AMP PEAK 15(XQ12) CNV AMP PEAK 15(XQ12) WILD-TYPE
  CLUS_1                     1                          31
  CLUS_2                     0                          64
  CLUS_3                     3                          87
D15V7, multiclass
D15V8, multiclass
        clus
vv       AMP PEAK 15(XQ12) CNV AMP PEAK 15(XQ12) WILD-TYPE
  CLUS_1                     0                           4
  CLUS_2                     1                          84
  CLUS_3                     3                          94

Clustering(16) Variable = Amp Peak 16(Xq21.1)
D16V1, multiclass
        clus
vv       AMP PEAK 16(XQ21.1) CNV AMP PEAK 16(XQ21.1) WILD-TYPE
  CLUS_1                       1                            33
  CLUS_2                       2                            90
  CLUS_3                       4                            55
  CLUS_4                       0                             2
D16V2, multiclass
        clus
vv       AMP PEAK 16(XQ21.1) CNV AMP PEAK 16(XQ21.1) WILD-TYPE
  CLUS_1                       3                            54
  CLUS_2                       4                            53
  CLUS_3                       0                            55
  CLUS_4                       0                            18
D16V3, multiclass
        clus
vv       AMP PEAK 16(XQ21.1) CNV AMP PEAK 16(XQ21.1) WILD-TYPE
  CLUS_1                       3                            56
  CLUS_2                       0                            53
  CLUS_3                       4                            59
D16V4, multiclass
        clus
vv       AMP PEAK 16(XQ21.1) CNV AMP PEAK 16(XQ21.1) WILD-TYPE
  CLUS_1                       3                            46
  CLUS_2                       4                            71
  CLUS_3                       0                            51
D16V5, multiclass
        clus
vv       AMP PEAK 16(XQ21.1) CNV AMP PEAK 16(XQ21.1) WILD-TYPE
  CLUS_1                       3                            49
  CLUS_2                       2                            49
  CLUS_3                       1                            27
  CLUS_4                       1                            54
D16V6, multiclass
        clus
vv       AMP PEAK 16(XQ21.1) CNV AMP PEAK 16(XQ21.1) WILD-TYPE
  CLUS_1                       1                            31
  CLUS_2                       4                            60
  CLUS_3                       2                            88
D16V7, multiclass
D16V8, multiclass
        clus
vv       AMP PEAK 16(XQ21.1) CNV AMP PEAK 16(XQ21.1) WILD-TYPE
  CLUS_1                       0                             4
  CLUS_2                       5                            80
  CLUS_3                       2                            95

Clustering(17) Variable = Amp Peak 17(Xq21.1)
D17V1, multiclass
        clus
vv       AMP PEAK 17(XQ21.1) CNV AMP PEAK 17(XQ21.1) WILD-TYPE
  CLUS_1                       1                            33
  CLUS_2                       1                            91
  CLUS_3                       3                            56
  CLUS_4                       0                             2
D17V2, multiclass
        clus
vv       AMP PEAK 17(XQ21.1) CNV AMP PEAK 17(XQ21.1) WILD-TYPE
  CLUS_1                       4                            53
  CLUS_2                       0                            57
  CLUS_3                       1                            54
  CLUS_4                       0                            18
D17V3, multiclass
        clus
vv       AMP PEAK 17(XQ21.1) CNV AMP PEAK 17(XQ21.1) WILD-TYPE
  CLUS_1                       3                            56
  CLUS_2                       1                            52
  CLUS_3                       1                            62
D17V4, multiclass
        clus
vv       AMP PEAK 17(XQ21.1) CNV AMP PEAK 17(XQ21.1) WILD-TYPE
  CLUS_1                       3                            46
  CLUS_2                       1                            74
  CLUS_3                       1                            50
D17V5, multiclass
        clus
vv       AMP PEAK 17(XQ21.1) CNV AMP PEAK 17(XQ21.1) WILD-TYPE
  CLUS_1                       2                            50
  CLUS_2                       1                            50
  CLUS_3                       0                            28
  CLUS_4                       2                            53
D17V6, multiclass
        clus
vv       AMP PEAK 17(XQ21.1) CNV AMP PEAK 17(XQ21.1) WILD-TYPE
  CLUS_1                       0                            32
  CLUS_2                       2                            62
  CLUS_3                       3                            87
D17V7, multiclass
D17V8, multiclass
        clus
vv       AMP PEAK 17(XQ21.1) CNV AMP PEAK 17(XQ21.1) WILD-TYPE
  CLUS_1                       0                             4
  CLUS_2                       2                            83
  CLUS_3                       3                            94

Clustering(18) Variable = Amp Peak 18(Xq21.31)
D18V1, multiclass
        clus
vv       AMP PEAK 18(XQ21.31) CNV AMP PEAK 18(XQ21.31) WILD-TYPE
  CLUS_1                        0                             34
  CLUS_2                        1                             91
  CLUS_3                        4                             55
  CLUS_4                        0                              2
D18V2, multiclass
        clus
vv       AMP PEAK 18(XQ21.31) CNV AMP PEAK 18(XQ21.31) WILD-TYPE
  CLUS_1                        3                             54
  CLUS_2                        2                             55
  CLUS_3                        0                             55
  CLUS_4                        0                             18
D18V3, multiclass
        clus
vv       AMP PEAK 18(XQ21.31) CNV AMP PEAK 18(XQ21.31) WILD-TYPE
  CLUS_1                        3                             56
  CLUS_2                        0                             53
  CLUS_3                        2                             61
D18V4, multiclass
        clus
vv       AMP PEAK 18(XQ21.31) CNV AMP PEAK 18(XQ21.31) WILD-TYPE
  CLUS_1                        3                             46
  CLUS_2                        2                             73
  CLUS_3                        0                             51
D18V5, multiclass
        clus
vv       AMP PEAK 18(XQ21.31) CNV AMP PEAK 18(XQ21.31) WILD-TYPE
  CLUS_1                        2                             50
  CLUS_2                        1                             50
  CLUS_3                        1                             27
  CLUS_4                        1                             54
D18V6, multiclass
        clus
vv       AMP PEAK 18(XQ21.31) CNV AMP PEAK 18(XQ21.31) WILD-TYPE
  CLUS_1                        1                             31
  CLUS_2                        1                             63
  CLUS_3                        3                             87
D18V7, multiclass
D18V8, multiclass
        clus
vv       AMP PEAK 18(XQ21.31) CNV AMP PEAK 18(XQ21.31) WILD-TYPE
  CLUS_1                        0                              4
  CLUS_2                        3                             82
  CLUS_3                        2                             95

Clustering(19) Variable = Amp Peak 19(Xq25)
D19V1, multiclass
        clus
vv       AMP PEAK 19(XQ25) CNV AMP PEAK 19(XQ25) WILD-TYPE
  CLUS_1                     0                          34
  CLUS_2                     0                          92
  CLUS_3                     4                          55
  CLUS_4                     0                           2
D19V2, multiclass
        clus
vv       AMP PEAK 19(XQ25) CNV AMP PEAK 19(XQ25) WILD-TYPE
  CLUS_1                     2                          55
  CLUS_2                     0                          57
  CLUS_3                     2                          53
  CLUS_4                     0                          18
D19V3, multiclass
        clus
vv       AMP PEAK 19(XQ25) CNV AMP PEAK 19(XQ25) WILD-TYPE
  CLUS_1                     2                          57
  CLUS_2                     2                          51
  CLUS_3                     0                          63
D19V4, multiclass
        clus
vv       AMP PEAK 19(XQ25) CNV AMP PEAK 19(XQ25) WILD-TYPE
  CLUS_1                     2                          47
  CLUS_2                     0                          75
  CLUS_3                     2                          49
D19V5, multiclass
        clus
vv       AMP PEAK 19(XQ25) CNV AMP PEAK 19(XQ25) WILD-TYPE
  CLUS_1                     1                          51
  CLUS_2                     0                          51
  CLUS_3                     0                          28
  CLUS_4                     3                          52
D19V6, multiclass
        clus
vv       AMP PEAK 19(XQ25) CNV AMP PEAK 19(XQ25) WILD-TYPE
  CLUS_1                     0                          32
  CLUS_2                     0                          64
  CLUS_3                     4                          86
D19V7, multiclass
D19V8, multiclass
        clus
vv       AMP PEAK 19(XQ25) CNV AMP PEAK 19(XQ25) WILD-TYPE
  CLUS_1                     0                           4
  CLUS_2                     0                          85
  CLUS_3                     4                          93

Clustering(20) Variable = Amp Peak 20(Xq25)
D20V1, multiclass
        clus
vv       AMP PEAK 20(XQ25) CNV AMP PEAK 20(XQ25) WILD-TYPE
  CLUS_1                     1                          33
  CLUS_2                     3                          89
  CLUS_3                     2                          57
  CLUS_4                     0                           2
D20V2, multiclass
        clus
vv       AMP PEAK 20(XQ25) CNV AMP PEAK 20(XQ25) WILD-TYPE
  CLUS_1                     3                          54
  CLUS_2                     1                          56
  CLUS_3                     0                          55
  CLUS_4                     2                          16
D20V3, multiclass
        clus
vv       AMP PEAK 20(XQ25) CNV AMP PEAK 20(XQ25) WILD-TYPE
  CLUS_1                     3                          56
  CLUS_2                     3                          50
  CLUS_3                     0                          63
D20V4, multiclass
        clus
vv       AMP PEAK 20(XQ25) CNV AMP PEAK 20(XQ25) WILD-TYPE
  CLUS_1                     3                          46
  CLUS_2                     2                          73
  CLUS_3                     1                          50
D20V5, multiclass
        clus
vv       AMP PEAK 20(XQ25) CNV AMP PEAK 20(XQ25) WILD-TYPE
  CLUS_1                     2                          50
  CLUS_2                     3                          48
  CLUS_3                     0                          28
  CLUS_4                     1                          54
D20V6, multiclass
        clus
vv       AMP PEAK 20(XQ25) CNV AMP PEAK 20(XQ25) WILD-TYPE
  CLUS_1                     0                          32
  CLUS_2                     4                          60
  CLUS_3                     2                          88
D20V7, multiclass
D20V8, multiclass
        clus
vv       AMP PEAK 20(XQ25) CNV AMP PEAK 20(XQ25) WILD-TYPE
  CLUS_1                     0                           4
  CLUS_2                     4                          81
  CLUS_3                     2                          95

Clustering(21) Variable = Amp Peak 21(Xq27.1)
D21V1, multiclass
        clus
vv       AMP PEAK 21(XQ27.1) CNV AMP PEAK 21(XQ27.1) WILD-TYPE
  CLUS_1                       4                            30
  CLUS_2                       1                            91
  CLUS_3                       3                            56
  CLUS_4                       1                             1
D21V2, multiclass
        clus
vv       AMP PEAK 21(XQ27.1) CNV AMP PEAK 21(XQ27.1) WILD-TYPE
  CLUS_1                       4                            53
  CLUS_2                       3                            54
  CLUS_3                       1                            54
  CLUS_4                       1                            17
D21V3, multiclass
        clus
vv       AMP PEAK 21(XQ27.1) CNV AMP PEAK 21(XQ27.1) WILD-TYPE
  CLUS_1                       4                            55
  CLUS_2                       2                            51
  CLUS_3                       3                            60
D21V4, multiclass
        clus
vv       AMP PEAK 21(XQ27.1) CNV AMP PEAK 21(XQ27.1) WILD-TYPE
  CLUS_1                       3                            46
  CLUS_2                       3                            72
  CLUS_3                       3                            48
D21V5, multiclass
        clus
vv       AMP PEAK 21(XQ27.1) CNV AMP PEAK 21(XQ27.1) WILD-TYPE
  CLUS_1                       1                            51
  CLUS_2                       0                            51
  CLUS_3                       3                            25
  CLUS_4                       5                            50
D21V6, multiclass
        clus
vv       AMP PEAK 21(XQ27.1) CNV AMP PEAK 21(XQ27.1) WILD-TYPE
  CLUS_1                       3                            29
  CLUS_2                       0                            64
  CLUS_3                       6                            84
D21V7, multiclass
D21V8, multiclass
        clus
vv       AMP PEAK 21(XQ27.1) CNV AMP PEAK 21(XQ27.1) WILD-TYPE
  CLUS_1                       0                             4
  CLUS_2                       0                            85
  CLUS_3                       9                            88

Clustering(22) Variable = Del Peak  1(1p31.3)
D22V1, multiclass
        clus
vv       DEL PEAK  1(1P31.3) CNV DEL PEAK  1(1P31.3) WILD-TYPE
  CLUS_1                       2                            32
  CLUS_2                       7                            85
  CLUS_3                      13                            46
  CLUS_4                       0                             2
D22V2, multiclass
        clus
vv       DEL PEAK  1(1P31.3) CNV DEL PEAK  1(1P31.3) WILD-TYPE
  CLUS_1                       4                            53
  CLUS_2                      15                            42
  CLUS_3                       1                            54
  CLUS_4                       2                            16
D22V3, multiclass
        clus
vv       DEL PEAK  1(1P31.3) CNV DEL PEAK  1(1P31.3) WILD-TYPE
  CLUS_1                       5                            54
  CLUS_2                       1                            52
  CLUS_3                      14                            49
D22V4, multiclass
        clus
vv       DEL PEAK  1(1P31.3) CNV DEL PEAK  1(1P31.3) WILD-TYPE
  CLUS_1                       4                            45
  CLUS_2                      15                            60
  CLUS_3                       1                            50
D22V5, multiclass
        clus
vv       DEL PEAK  1(1P31.3) CNV DEL PEAK  1(1P31.3) WILD-TYPE
  CLUS_1                       8                            44
  CLUS_2                       2                            49
  CLUS_3                       1                            27
  CLUS_4                      11                            44
D22V6, multiclass
        clus
vv       DEL PEAK  1(1P31.3) CNV DEL PEAK  1(1P31.3) WILD-TYPE
  CLUS_1                       2                            30
  CLUS_2                       7                            57
  CLUS_3                      13                            77
D22V7, multiclass
D22V8, multiclass
        clus
vv       DEL PEAK  1(1P31.3) CNV DEL PEAK  1(1P31.3) WILD-TYPE
  CLUS_1                       0                             4
  CLUS_2                       7                            78
  CLUS_3                      15                            82

Clustering(23) Variable = Del Peak  2(1p21.3)
D23V1, multiclass
        clus
vv       DEL PEAK  2(1P21.3) CNV DEL PEAK  2(1P21.3) WILD-TYPE
  CLUS_1                       5                            29
  CLUS_2                       2                            90
  CLUS_3                       9                            50
  CLUS_4                       0                             2
D23V2, multiclass
        clus
vv       DEL PEAK  2(1P21.3) CNV DEL PEAK  2(1P21.3) WILD-TYPE
  CLUS_1                       5                            52
  CLUS_2                       7                            50
  CLUS_3                       3                            52
  CLUS_4                       1                            17
D23V3, multiclass
        clus
vv       DEL PEAK  2(1P21.3) CNV DEL PEAK  2(1P21.3) WILD-TYPE
  CLUS_1                       5                            54
  CLUS_2                       4                            49
  CLUS_3                       6                            57
D23V4, multiclass
        clus
vv       DEL PEAK  2(1P21.3) CNV DEL PEAK  2(1P21.3) WILD-TYPE
  CLUS_1                       4                            45
  CLUS_2                       7                            68
  CLUS_3                       4                            47
D23V5, multiclass
        clus
vv       DEL PEAK  2(1P21.3) CNV DEL PEAK  2(1P21.3) WILD-TYPE
  CLUS_1                       5                            47
  CLUS_2                       2                            49
  CLUS_3                       2                            26
  CLUS_4                       7                            48
D23V6, multiclass
        clus
vv       DEL PEAK  2(1P21.3) CNV DEL PEAK  2(1P21.3) WILD-TYPE
  CLUS_1                       2                            30
  CLUS_2                       4                            60
  CLUS_3                      10                            80
D23V7, multiclass
D23V8, multiclass
        clus
vv       DEL PEAK  2(1P21.3) CNV DEL PEAK  2(1P21.3) WILD-TYPE
  CLUS_1                       0                             4
  CLUS_2                       4                            81
  CLUS_3                      12                            85

Clustering(24) Variable = Del Peak  3(1q23.1)
D24V1, multiclass
        clus
vv       DEL PEAK  3(1Q23.1) CNV DEL PEAK  3(1Q23.1) WILD-TYPE
  CLUS_1                       2                            32
  CLUS_2                       3                            89
  CLUS_3                       2                            57
  CLUS_4                       1                             1
D24V2, multiclass
        clus
vv       DEL PEAK  3(1Q23.1) CNV DEL PEAK  3(1Q23.1) WILD-TYPE
  CLUS_1                       3                            54
  CLUS_2                       3                            54
  CLUS_3                       0                            55
  CLUS_4                       2                            16
D24V3, multiclass
        clus
vv       DEL PEAK  3(1Q23.1) CNV DEL PEAK  3(1Q23.1) WILD-TYPE
  CLUS_1                       4                            55
  CLUS_2                       0                            53
  CLUS_3                       4                            59
D24V4, multiclass
        clus
vv       DEL PEAK  3(1Q23.1) CNV DEL PEAK  3(1Q23.1) WILD-TYPE
  CLUS_1                       4                            45
  CLUS_2                       4                            71
  CLUS_3                       0                            51
D24V5, multiclass
        clus
vv       DEL PEAK  3(1Q23.1) CNV DEL PEAK  3(1Q23.1) WILD-TYPE
  CLUS_1                       4                            48
  CLUS_2                       0                            51
  CLUS_3                       0                            28
  CLUS_4                       4                            51
D24V6, multiclass
        clus
vv       DEL PEAK  3(1Q23.1) CNV DEL PEAK  3(1Q23.1) WILD-TYPE
  CLUS_1                       1                            31
  CLUS_2                       0                            64
  CLUS_3                       7                            83
D24V7, multiclass
D24V8, multiclass
        clus
vv       DEL PEAK  3(1Q23.1) CNV DEL PEAK  3(1Q23.1) WILD-TYPE
  CLUS_1                       0                             4
  CLUS_2                       1                            84
  CLUS_3                       7                            90

Clustering(25) Variable = Del Peak  4(1q42.13)
D25V1, multiclass
        clus
vv       DEL PEAK  4(1Q42.13) CNV DEL PEAK  4(1Q42.13) WILD-TYPE
  CLUS_1                        4                             30
  CLUS_2                        6                             86
  CLUS_3                        8                             51
  CLUS_4                        0                              2
D25V2, multiclass
        clus
vv       DEL PEAK  4(1Q42.13) CNV DEL PEAK  4(1Q42.13) WILD-TYPE
  CLUS_1                       10                             47
  CLUS_2                        5                             52
  CLUS_3                        2                             53
  CLUS_4                        1                             17
D25V3, multiclass
        clus
vv       DEL PEAK  4(1Q42.13) CNV DEL PEAK  4(1Q42.13) WILD-TYPE
  CLUS_1                        7                             52
  CLUS_2                        4                             49
  CLUS_3                        6                             57
D25V4, multiclass
        clus
vv       DEL PEAK  4(1Q42.13) CNV DEL PEAK  4(1Q42.13) WILD-TYPE
  CLUS_1                        6                             43
  CLUS_2                        7                             68
  CLUS_3                        4                             47
D25V5, multiclass
        clus
vv       DEL PEAK  4(1Q42.13) CNV DEL PEAK  4(1Q42.13) WILD-TYPE
  CLUS_1                        5                             47
  CLUS_2                        4                             47
  CLUS_3                        2                             26
  CLUS_4                        7                             48
D25V6, multiclass
        clus
vv       DEL PEAK  4(1Q42.13) CNV DEL PEAK  4(1Q42.13) WILD-TYPE
  CLUS_1                        3                             29
  CLUS_2                        4                             60
  CLUS_3                       11                             79
D25V7, multiclass
D25V8, multiclass
        clus
vv       DEL PEAK  4(1Q42.13) CNV DEL PEAK  4(1Q42.13) WILD-TYPE
  CLUS_1                        0                              4
  CLUS_2                        8                             77
  CLUS_3                       10                             87

Clustering(26) Variable = Del Peak  5(2q22.1)
D26V1, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) CNV DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                       8                            26
  CLUS_2                       2                            90
  CLUS_3                      11                            48
  CLUS_4                       1                             1
D26V2, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) CNV DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                      12                            45
  CLUS_2                       7                            50
  CLUS_3                       2                            53
  CLUS_4                       1                            17
D26V3, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) CNV DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                      11                            48
  CLUS_2                       3                            50
  CLUS_3                       7                            56
D26V4, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) CNV DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                      11                            38
  CLUS_2                       7                            68
  CLUS_3                       3                            48
D26V5, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) CNV DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                       8                            44
  CLUS_2                       2                            49
  CLUS_3                       1                            27
  CLUS_4                      11                            44
D26V6, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) CNV DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                       2                            30
  CLUS_2                       1                            63
  CLUS_3                      19                            71
D26V7, multiclass
D26V8, multiclass
        clus
vv       DEL PEAK  5(2Q22.1) CNV DEL PEAK  5(2Q22.1) WILD-TYPE
  CLUS_1                       0                             4
  CLUS_2                       4                            81
  CLUS_3                      18                            79

Clustering(27) Variable = Del Peak  6(3p13)
D27V1, multiclass
        clus
vv       DEL PEAK  6(3P13) CNV DEL PEAK  6(3P13) WILD-TYPE
  CLUS_1                     3                          31
  CLUS_2                    16                          76
  CLUS_3                     9                          50
  CLUS_4                     0                           2
D27V2, multiclass
        clus
vv       DEL PEAK  6(3P13) CNV DEL PEAK  6(3P13) WILD-TYPE
  CLUS_1                     4                          53
  CLUS_2                    15                          42
  CLUS_3                     7                          48
  CLUS_4                     2                          16
D27V3, multiclass
        clus
vv       DEL PEAK  6(3P13) CNV DEL PEAK  6(3P13) WILD-TYPE
  CLUS_1                     6                          53
  CLUS_2                     8                          45
  CLUS_3                    13                          50
D27V4, multiclass
        clus
vv       DEL PEAK  6(3P13) CNV DEL PEAK  6(3P13) WILD-TYPE
  CLUS_1                     4                          45
  CLUS_2                    18                          57
  CLUS_3                     5                          46
D27V5, multiclass
        clus
vv       DEL PEAK  6(3P13) CNV DEL PEAK  6(3P13) WILD-TYPE
  CLUS_1                    11                          41
  CLUS_2                     9                          42
  CLUS_3                     4                          24
  CLUS_4                     4                          51
D27V6, multiclass
        clus
vv       DEL PEAK  6(3P13) CNV DEL PEAK  6(3P13) WILD-TYPE
  CLUS_1                     4                          28
  CLUS_2                    11                          53
  CLUS_3                    13                          77
D27V7, multiclass
D27V8, multiclass
        clus
vv       DEL PEAK  6(3P13) CNV DEL PEAK  6(3P13) WILD-TYPE
  CLUS_1                     0                           4
  CLUS_2                    18                          67
  CLUS_3                    10                          87

Clustering(28) Variable = Del Peak  7(3q29)
D28V1, multiclass
        clus
vv       DEL PEAK  7(3Q29) CNV DEL PEAK  7(3Q29) WILD-TYPE
  CLUS_1                     1                          33
  CLUS_2                     7                          85
  CLUS_3                     4                          55
  CLUS_4                     0                           2
D28V2, multiclass
        clus
vv       DEL PEAK  7(3Q29) CNV DEL PEAK  7(3Q29) WILD-TYPE
  CLUS_1                     2                          55
  CLUS_2                     4                          53
  CLUS_3                     2                          53
  CLUS_4                     4                          14
D28V3, multiclass
        clus
vv       DEL PEAK  7(3Q29) CNV DEL PEAK  7(3Q29) WILD-TYPE
  CLUS_1                     3                          56
  CLUS_2                     1                          52
  CLUS_3                     8                          55
D28V4, multiclass
        clus
vv       DEL PEAK  7(3Q29) CNV DEL PEAK  7(3Q29) WILD-TYPE
  CLUS_1                     3                          46
  CLUS_2                     9                          66
  CLUS_3                     0                          51
D28V5, multiclass
        clus
vv       DEL PEAK  7(3Q29) CNV DEL PEAK  7(3Q29) WILD-TYPE
  CLUS_1                     4                          48
  CLUS_2                     2                          49
  CLUS_3                     2                          26
  CLUS_4                     4                          51
D28V6, multiclass
        clus
vv       DEL PEAK  7(3Q29) CNV DEL PEAK  7(3Q29) WILD-TYPE
  CLUS_1                     2                          30
  CLUS_2                     3                          61
  CLUS_3                     7                          83
D28V7, multiclass
D28V8, multiclass
        clus
vv       DEL PEAK  7(3Q29) CNV DEL PEAK  7(3Q29) WILD-TYPE
  CLUS_1                     0                           4
  CLUS_2                     4                          81
  CLUS_3                     8                          89

Clustering(29) Variable = Del Peak  8(4q28.2)
D29V1, multiclass
        clus
vv       DEL PEAK  8(4Q28.2) CNV DEL PEAK  8(4Q28.2) WILD-TYPE
  CLUS_1                       4                            30
  CLUS_2                       1                            91
  CLUS_3                      12                            47
  CLUS_4                       0                             2
D29V2, multiclass
        clus
vv       DEL PEAK  8(4Q28.2) CNV DEL PEAK  8(4Q28.2) WILD-TYPE
  CLUS_1                      11                            46
  CLUS_2                       4                            53
  CLUS_3                       1                            54
  CLUS_4                       1                            17
D29V3, multiclass
        clus
vv       DEL PEAK  8(4Q28.2) CNV DEL PEAK  8(4Q28.2) WILD-TYPE
  CLUS_1                      10                            49
  CLUS_2                       1                            52
  CLUS_3                       4                            59
D29V4, multiclass
        clus
vv       DEL PEAK  8(4Q28.2) CNV DEL PEAK  8(4Q28.2) WILD-TYPE
  CLUS_1                       8                            41
  CLUS_2                       4                            71
  CLUS_3                       3                            48
D29V5, multiclass
        clus
vv       DEL PEAK  8(4Q28.2) CNV DEL PEAK  8(4Q28.2) WILD-TYPE
  CLUS_1                       6                            46
  CLUS_2                       1                            50
  CLUS_3                       2                            26
  CLUS_4                       7                            48
D29V6, multiclass
        clus
vv       DEL PEAK  8(4Q28.2) CNV DEL PEAK  8(4Q28.2) WILD-TYPE
  CLUS_1                       3                            29
  CLUS_2                       2                            62
  CLUS_3                      11                            79
D29V7, multiclass
D29V8, multiclass
        clus
vv       DEL PEAK  8(4Q28.2) CNV DEL PEAK  8(4Q28.2) WILD-TYPE
  CLUS_1                       0                             4
  CLUS_2                       4                            81
  CLUS_3                      12                            85

Clustering(30) Variable = Del Peak  9(5q11.2)
D30V1, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) CNV DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                       9                            25
  CLUS_2                       2                            90
  CLUS_3                      19                            40
  CLUS_4                       0                             2
D30V2, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) CNV DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                      17                            40
  CLUS_2                       8                            49
  CLUS_3                       2                            53
  CLUS_4                       3                            15
D30V3, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) CNV DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                      13                            46
  CLUS_2                       4                            49
  CLUS_3                      11                            52
D30V4, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) CNV DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                      11                            38
  CLUS_2                      14                            61
  CLUS_3                       3                            48
D30V5, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) CNV DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                      14                            38
  CLUS_2                       5                            46
  CLUS_3                       4                            24
  CLUS_4                       6                            49
D30V6, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) CNV DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                       3                            29
  CLUS_2                      10                            54
  CLUS_3                      16                            74
D30V7, multiclass
D30V8, multiclass
        clus
vv       DEL PEAK  9(5Q11.2) CNV DEL PEAK  9(5Q11.2) WILD-TYPE
  CLUS_1                       0                             4
  CLUS_2                      12                            73
  CLUS_3                      17                            80

Clustering(31) Variable = Del Peak 10(5q21.1)
D31V1, multiclass
        clus
vv       DEL PEAK 10(5Q21.1) CNV DEL PEAK 10(5Q21.1) WILD-TYPE
  CLUS_1                      14                            20
  CLUS_2                       0                            92
  CLUS_3                      19                            40
  CLUS_4                       0                             2
D31V2, multiclass
        clus
vv       DEL PEAK 10(5Q21.1) CNV DEL PEAK 10(5Q21.1) WILD-TYPE
  CLUS_1                      20                            37
  CLUS_2                       7                            50
  CLUS_3                       5                            50
  CLUS_4                       1                            17
D31V3, multiclass
        clus
vv       DEL PEAK 10(5Q21.1) CNV DEL PEAK 10(5Q21.1) WILD-TYPE
  CLUS_1                      19                            40
  CLUS_2                       6                            47
  CLUS_3                       6                            57
D31V4, multiclass
        clus
vv       DEL PEAK 10(5Q21.1) CNV DEL PEAK 10(5Q21.1) WILD-TYPE
  CLUS_1                      16                            33
  CLUS_2                       8                            67
  CLUS_3                       7                            44
D31V5, multiclass
        clus
vv       DEL PEAK 10(5Q21.1) CNV DEL PEAK 10(5Q21.1) WILD-TYPE
  CLUS_1                      14                            38
  CLUS_2                       6                            45
  CLUS_3                       3                            25
  CLUS_4                       9                            46
D31V6, multiclass
        clus
vv       DEL PEAK 10(5Q21.1) CNV DEL PEAK 10(5Q21.1) WILD-TYPE
  CLUS_1                       3                            29
  CLUS_2                      11                            53
  CLUS_3                      18                            72
D31V7, multiclass
D31V8, multiclass
        clus
vv       DEL PEAK 10(5Q21.1) CNV DEL PEAK 10(5Q21.1) WILD-TYPE
  CLUS_1                       1                             3
  CLUS_2                      13                            72
  CLUS_3                      18                            79

Clustering(32) Variable = Del Peak 11(6q15)
D32V1, multiclass
        clus
vv       DEL PEAK 11(6Q15) CNV DEL PEAK 11(6Q15) WILD-TYPE
  CLUS_1                    27                           7
  CLUS_2                     4                          88
  CLUS_3                    27                          32
  CLUS_4                     1                           1
D32V2, multiclass
        clus
vv       DEL PEAK 11(6Q15) CNV DEL PEAK 11(6Q15) WILD-TYPE
  CLUS_1                    34                          23
  CLUS_2                    16                          41
  CLUS_3                     4                          51
  CLUS_4                     5                          13
D32V3, multiclass
        clus
vv       DEL PEAK 11(6Q15) CNV DEL PEAK 11(6Q15) WILD-TYPE
  CLUS_1                    32                          27
  CLUS_2                     5                          48
  CLUS_3                    18                          45
D32V4, multiclass
        clus
vv       DEL PEAK 11(6Q15) CNV DEL PEAK 11(6Q15) WILD-TYPE
  CLUS_1                    26                          23
  CLUS_2                    23                          52
  CLUS_3                     6                          45
D32V5, multiclass
        clus
vv       DEL PEAK 11(6Q15) CNV DEL PEAK 11(6Q15) WILD-TYPE
  CLUS_1                    27                          25
  CLUS_2                     5                          46
  CLUS_3                     8                          20
  CLUS_4                    18                          37
D32V6, multiclass
        clus
vv       DEL PEAK 11(6Q15) CNV DEL PEAK 11(6Q15) WILD-TYPE
  CLUS_1                     9                          23
  CLUS_2                    13                          51
  CLUS_3                    36                          54
D32V7, multiclass
D32V8, multiclass
        clus
vv       DEL PEAK 11(6Q15) CNV DEL PEAK 11(6Q15) WILD-TYPE
  CLUS_1                     0                           4
  CLUS_2                    24                          61
  CLUS_3                    34                          63

Clustering(33) Variable = Del Peak 12(7q36.1)
D33V1, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) CNV DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                       1                            33
  CLUS_2                       3                            89
  CLUS_3                       5                            54
  CLUS_4                       0                             2
D33V2, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) CNV DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                       3                            54
  CLUS_2                       2                            55
  CLUS_3                       1                            54
  CLUS_4                       3                            15
D33V3, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) CNV DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                       3                            56
  CLUS_2                       1                            52
  CLUS_3                       4                            59
D33V4, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) CNV DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                       2                            47
  CLUS_2                       5                            70
  CLUS_3                       1                            50
D33V5, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) CNV DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                       5                            47
  CLUS_2                       2                            49
  CLUS_3                       0                            28
  CLUS_4                       2                            53
D33V6, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) CNV DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                       0                            32
  CLUS_2                       4                            60
  CLUS_3                       5                            85
D33V7, multiclass
D33V8, multiclass
        clus
vv       DEL PEAK 12(7Q36.1) CNV DEL PEAK 12(7Q36.1) WILD-TYPE
  CLUS_1                       0                             4
  CLUS_2                       5                            80
  CLUS_3                       4                            93

Clustering(34) Variable = Del Peak 13(8p21.3)
D34V1, multiclass
        clus
vv       DEL PEAK 13(8P21.3) CNV DEL PEAK 13(8P21.3) WILD-TYPE
  CLUS_1                      17                            17
  CLUS_2                      38                            54
  CLUS_3                      52                             7
  CLUS_4                       1                             1
D34V2, multiclass
        clus
vv       DEL PEAK 13(8P21.3) CNV DEL PEAK 13(8P21.3) WILD-TYPE
  CLUS_1                      33                            24
  CLUS_2                      43                            14
  CLUS_3                      17                            38
  CLUS_4                      15                             3
D34V3, multiclass
        clus
vv       DEL PEAK 13(8P21.3) CNV DEL PEAK 13(8P21.3) WILD-TYPE
  CLUS_1                      30                            29
  CLUS_2                      24                            29
  CLUS_3                      51                            12
D34V4, multiclass
        clus
vv       DEL PEAK 13(8P21.3) CNV DEL PEAK 13(8P21.3) WILD-TYPE
  CLUS_1                      25                            24
  CLUS_2                      58                            17
  CLUS_3                      22                            29
D34V5, multiclass
        clus
vv       DEL PEAK 13(8P21.3) CNV DEL PEAK 13(8P21.3) WILD-TYPE
  CLUS_1                      39                            13
  CLUS_2                      25                            26
  CLUS_3                      12                            16
  CLUS_4                      31                            24
D34V6, multiclass
        clus
vv       DEL PEAK 13(8P21.3) CNV DEL PEAK 13(8P21.3) WILD-TYPE
  CLUS_1                      15                            17
  CLUS_2                      36                            28
  CLUS_3                      56                            34
D34V7, multiclass
D34V8, multiclass
        clus
vv       DEL PEAK 13(8P21.3) CNV DEL PEAK 13(8P21.3) WILD-TYPE
  CLUS_1                       0                             4
  CLUS_2                      50                            35
  CLUS_3                      57                            40

Clustering(35) Variable = Del Peak 14(8p11.21)
D35V1, multiclass
        clus
vv       DEL PEAK 14(8P11.21) CNV DEL PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                        8                             26
  CLUS_2                       23                             69
  CLUS_3                       28                             31
  CLUS_4                        0                              2
D35V2, multiclass
        clus
vv       DEL PEAK 14(8P11.21) CNV DEL PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                       19                             38
  CLUS_2                       26                             31
  CLUS_3                        5                             50
  CLUS_4                        9                              9
D35V3, multiclass
        clus
vv       DEL PEAK 14(8P11.21) CNV DEL PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                       17                             42
  CLUS_2                       10                             43
  CLUS_3                       32                             31
D35V4, multiclass
        clus
vv       DEL PEAK 14(8P11.21) CNV DEL PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                       16                             33
  CLUS_2                       33                             42
  CLUS_3                       10                             41
D35V5, multiclass
        clus
vv       DEL PEAK 14(8P11.21) CNV DEL PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                       21                             31
  CLUS_2                       13                             38
  CLUS_3                        7                             21
  CLUS_4                       18                             37
D35V6, multiclass
        clus
vv       DEL PEAK 14(8P11.21) CNV DEL PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                        9                             23
  CLUS_2                       21                             43
  CLUS_3                       29                             61
D35V7, multiclass
D35V8, multiclass
        clus
vv       DEL PEAK 14(8P11.21) CNV DEL PEAK 14(8P11.21) WILD-TYPE
  CLUS_1                        0                              4
  CLUS_2                       27                             58
  CLUS_3                       32                             65

Clustering(36) Variable = Del Peak 15(9p22.3)
D36V1, multiclass
        clus
vv       DEL PEAK 15(9P22.3) CNV DEL PEAK 15(9P22.3) WILD-TYPE
  CLUS_1                       0                            34
  CLUS_2                       3                            89
  CLUS_3                      12                            47
  CLUS_4                       0                             2
D36V2, multiclass
        clus
vv       DEL PEAK 15(9P22.3) CNV DEL PEAK 15(9P22.3) WILD-TYPE
  CLUS_1                       6                            51
  CLUS_2                       6                            51
  CLUS_3                       2                            53
  CLUS_4                       1                            17
D36V3, multiclass
        clus
vv       DEL PEAK 15(9P22.3) CNV DEL PEAK 15(9P22.3) WILD-TYPE
  CLUS_1                       4                            55
  CLUS_2                       2                            51
  CLUS_3                       8                            55
D36V4, multiclass
        clus
vv       DEL PEAK 15(9P22.3) CNV DEL PEAK 15(9P22.3) WILD-TYPE
  CLUS_1                       3                            46
  CLUS_2                       9                            66
  CLUS_3                       2                            49
D36V5, multiclass
        clus
vv       DEL PEAK 15(9P22.3) CNV DEL PEAK 15(9P22.3) WILD-TYPE
  CLUS_1                       4                            48
  CLUS_2                       2                            49
  CLUS_3                       2                            26
  CLUS_4                       6                            49
D36V6, multiclass
        clus
vv       DEL PEAK 15(9P22.3) CNV DEL PEAK 15(9P22.3) WILD-TYPE
  CLUS_1                       2                            30
  CLUS_2                       5                            59
  CLUS_3                       7                            83
D36V7, multiclass
D36V8, multiclass
        clus
vv       DEL PEAK 15(9P22.3) CNV DEL PEAK 15(9P22.3) WILD-TYPE
  CLUS_1                       0                             4
  CLUS_2                       7                            78
  CLUS_3                       7                            90

Clustering(37) Variable = Del Peak 16(10q23.31)
D37V1, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) CNV DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                         4                              30
  CLUS_2                        24                              68
  CLUS_3                        36                              23
  CLUS_4                         1                               1
D37V2, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) CNV DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                        13                              44
  CLUS_2                        35                              22
  CLUS_3                         8                              47
  CLUS_4                         9                               9
D37V3, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) CNV DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                        13                              46
  CLUS_2                         9                              44
  CLUS_3                        40                              23
D37V4, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) CNV DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                        10                              39
  CLUS_2                        43                              32
  CLUS_3                         9                              42
D37V5, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) CNV DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                        23                              29
  CLUS_2                        14                              37
  CLUS_3                         4                              24
  CLUS_4                        23                              32
D37V6, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) CNV DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                         6                              26
  CLUS_2                        24                              40
  CLUS_3                        34                              56
D37V7, multiclass
D37V8, multiclass
        clus
vv       DEL PEAK 16(10Q23.31) CNV DEL PEAK 16(10Q23.31) WILD-TYPE
  CLUS_1                         0                               4
  CLUS_2                        31                              54
  CLUS_3                        33                              64

Clustering(38) Variable = Del Peak 17(11q23.2)
D38V1, multiclass
        clus
vv       DEL PEAK 17(11Q23.2) CNV DEL PEAK 17(11Q23.2) WILD-TYPE
  CLUS_1                        2                             32
  CLUS_2                        8                             84
  CLUS_3                       13                             46
  CLUS_4                        0                              2
D38V2, multiclass
        clus
vv       DEL PEAK 17(11Q23.2) CNV DEL PEAK 17(11Q23.2) WILD-TYPE
  CLUS_1                        9                             48
  CLUS_2                        7                             50
  CLUS_3                        4                             51
  CLUS_4                        3                             15
D38V3, multiclass
        clus
vv       DEL PEAK 17(11Q23.2) CNV DEL PEAK 17(11Q23.2) WILD-TYPE
  CLUS_1                        6                             53
  CLUS_2                        7                             46
  CLUS_3                        8                             55
D38V4, multiclass
        clus
vv       DEL PEAK 17(11Q23.2) CNV DEL PEAK 17(11Q23.2) WILD-TYPE
  CLUS_1                        5                             44
  CLUS_2                        9                             66
  CLUS_3                        7                             44
D38V5, multiclass
        clus
vv       DEL PEAK 17(11Q23.2) CNV DEL PEAK 17(11Q23.2) WILD-TYPE
  CLUS_1                       10                             42
  CLUS_2                        2                             49
  CLUS_3                        3                             25
  CLUS_4                        8                             47
D38V6, multiclass
        clus
vv       DEL PEAK 17(11Q23.2) CNV DEL PEAK 17(11Q23.2) WILD-TYPE
  CLUS_1                        4                             28
  CLUS_2                        5                             59
  CLUS_3                       14                             76
D38V7, multiclass
D38V8, multiclass
        clus
vv       DEL PEAK 17(11Q23.2) CNV DEL PEAK 17(11Q23.2) WILD-TYPE
  CLUS_1                        0                              4
  CLUS_2                       10                             75
  CLUS_3                       13                             84

Clustering(39) Variable = Del Peak 18(12p13.2)
D39V1, multiclass
        clus
vv       DEL PEAK 18(12P13.2) CNV DEL PEAK 18(12P13.2) WILD-TYPE
  CLUS_1                        6                             28
  CLUS_2                        9                             83
  CLUS_3                       24                             35
  CLUS_4                        0                              2
D39V2, multiclass
        clus
vv       DEL PEAK 18(12P13.2) CNV DEL PEAK 18(12P13.2) WILD-TYPE
  CLUS_1                       16                             41
  CLUS_2                       14                             43
  CLUS_3                        4                             51
  CLUS_4                        5                             13
D39V3, multiclass
        clus
vv       DEL PEAK 18(12P13.2) CNV DEL PEAK 18(12P13.2) WILD-TYPE
  CLUS_1                       13                             46
  CLUS_2                        9                             44
  CLUS_3                       16                             47
D39V4, multiclass
        clus
vv       DEL PEAK 18(12P13.2) CNV DEL PEAK 18(12P13.2) WILD-TYPE
  CLUS_1                        9                             40
  CLUS_2                       22                             53
  CLUS_3                        7                             44
D39V5, multiclass
        clus
vv       DEL PEAK 18(12P13.2) CNV DEL PEAK 18(12P13.2) WILD-TYPE
  CLUS_1                       14                             38
  CLUS_2                        7                             44
  CLUS_3                        4                             24
  CLUS_4                       13                             42
D39V6, multiclass
        clus
vv       DEL PEAK 18(12P13.2) CNV DEL PEAK 18(12P13.2) WILD-TYPE
  CLUS_1                        4                             28
  CLUS_2                       12                             52
  CLUS_3                       22                             68
D39V7, multiclass
D39V8, multiclass
        clus
vv       DEL PEAK 18(12P13.2) CNV DEL PEAK 18(12P13.2) WILD-TYPE
  CLUS_1                        0                              4
  CLUS_2                       18                             67
  CLUS_3                       20                             77

Clustering(40) Variable = Del Peak 19(13q14.13)
D40V1, multiclass
        clus
vv       DEL PEAK 19(13Q14.13) CNV DEL PEAK 19(13Q14.13) WILD-TYPE
  CLUS_1                        21                              13
  CLUS_2                        27                              65
  CLUS_3                        34                              25
  CLUS_4                         1                               1
D40V2, multiclass
        clus
vv       DEL PEAK 19(13Q14.13) CNV DEL PEAK 19(13Q14.13) WILD-TYPE
  CLUS_1                        28                              29
  CLUS_2                        27                              30
  CLUS_3                        15                              40
  CLUS_4                        13                               5
D40V3, multiclass
        clus
vv       DEL PEAK 19(13Q14.13) CNV DEL PEAK 19(13Q14.13) WILD-TYPE
  CLUS_1                        30                              29
  CLUS_2                        14                              39
  CLUS_3                        37                              26
D40V4, multiclass
        clus
vv       DEL PEAK 19(13Q14.13) CNV DEL PEAK 19(13Q14.13) WILD-TYPE
  CLUS_1                        28                              21
  CLUS_2                        39                              36
  CLUS_3                        14                              37
D40V5, multiclass
        clus
vv       DEL PEAK 19(13Q14.13) CNV DEL PEAK 19(13Q14.13) WILD-TYPE
  CLUS_1                        26                              26
  CLUS_2                        18                              33
  CLUS_3                        12                              16
  CLUS_4                        27                              28
D40V6, multiclass
        clus
vv       DEL PEAK 19(13Q14.13) CNV DEL PEAK 19(13Q14.13) WILD-TYPE
  CLUS_1                        13                              19
  CLUS_2                        26                              38
  CLUS_3                        44                              46
D40V7, multiclass
D40V8, multiclass
        clus
vv       DEL PEAK 19(13Q14.13) CNV DEL PEAK 19(13Q14.13) WILD-TYPE
  CLUS_1                         1                               3
  CLUS_2                        36                              49
  CLUS_3                        46                              51

Clustering(41) Variable = Del Peak 20(16q24.1)
D41V1, multiclass
        clus
vv       DEL PEAK 20(16Q24.1) CNV DEL PEAK 20(16Q24.1) WILD-TYPE
  CLUS_1                        7                             27
  CLUS_2                       23                             69
  CLUS_3                       44                             15
  CLUS_4                        0                              2
D41V2, multiclass
        clus
vv       DEL PEAK 20(16Q24.1) CNV DEL PEAK 20(16Q24.1) WILD-TYPE
  CLUS_1                       20                             37
  CLUS_2                       28                             29
  CLUS_3                       13                             42
  CLUS_4                       13                              5
D41V3, multiclass
        clus
vv       DEL PEAK 20(16Q24.1) CNV DEL PEAK 20(16Q24.1) WILD-TYPE
  CLUS_1                       18                             41
  CLUS_2                       19                             34
  CLUS_3                       34                             29
D41V4, multiclass
        clus
vv       DEL PEAK 20(16Q24.1) CNV DEL PEAK 20(16Q24.1) WILD-TYPE
  CLUS_1                       13                             36
  CLUS_2                       39                             36
  CLUS_3                       19                             32
D41V5, multiclass
        clus
vv       DEL PEAK 20(16Q24.1) CNV DEL PEAK 20(16Q24.1) WILD-TYPE
  CLUS_1                       23                             29
  CLUS_2                       19                             32
  CLUS_3                        3                             25
  CLUS_4                       28                             27
D41V6, multiclass
        clus
vv       DEL PEAK 20(16Q24.1) CNV DEL PEAK 20(16Q24.1) WILD-TYPE
  CLUS_1                        6                             26
  CLUS_2                       27                             37
  CLUS_3                       40                             50
D41V7, multiclass
D41V8, multiclass
        clus
vv       DEL PEAK 20(16Q24.1) CNV DEL PEAK 20(16Q24.1) WILD-TYPE
  CLUS_1                        0                              4
  CLUS_2                       34                             51
  CLUS_3                       39                             58

Clustering(42) Variable = Del Peak 21(17p13.1)
D42V1, multiclass
        clus
vv       DEL PEAK 21(17P13.1) CNV DEL PEAK 21(17P13.1) WILD-TYPE
  CLUS_1                        3                             31
  CLUS_2                       10                             82
  CLUS_3                       32                             27
  CLUS_4                        1                              1
D42V2, multiclass
        clus
vv       DEL PEAK 21(17P13.1) CNV DEL PEAK 21(17P13.1) WILD-TYPE
  CLUS_1                       12                             45
  CLUS_2                       20                             37
  CLUS_3                        8                             47
  CLUS_4                        6                             12
D42V3, multiclass
        clus
vv       DEL PEAK 21(17P13.1) CNV DEL PEAK 21(17P13.1) WILD-TYPE
  CLUS_1                       10                             49
  CLUS_2                       10                             43
  CLUS_3                       23                             40
D42V4, multiclass
        clus
vv       DEL PEAK 21(17P13.1) CNV DEL PEAK 21(17P13.1) WILD-TYPE
  CLUS_1                        7                             42
  CLUS_2                       28                             47
  CLUS_3                        8                             43
D42V5, multiclass
        clus
vv       DEL PEAK 21(17P13.1) CNV DEL PEAK 21(17P13.1) WILD-TYPE
  CLUS_1                       14                             38
  CLUS_2                       13                             38
  CLUS_3                        3                             25
  CLUS_4                       15                             40
D42V6, multiclass
        clus
vv       DEL PEAK 21(17P13.1) CNV DEL PEAK 21(17P13.1) WILD-TYPE
  CLUS_1                        4                             28
  CLUS_2                       17                             47
  CLUS_3                       24                             66
D42V7, multiclass
D42V8, multiclass
        clus
vv       DEL PEAK 21(17P13.1) CNV DEL PEAK 21(17P13.1) WILD-TYPE
  CLUS_1                        0                              4
  CLUS_2                       22                             63
  CLUS_3                       23                             74

Clustering(43) Variable = Del Peak 22(17q21.31)
D43V1, multiclass
        clus
vv       DEL PEAK 22(17Q21.31) CNV DEL PEAK 22(17Q21.31) WILD-TYPE
  CLUS_1                         3                              31
  CLUS_2                        13                              79
  CLUS_3                        19                              40
  CLUS_4                         1                               1
D43V2, multiclass
        clus
vv       DEL PEAK 22(17Q21.31) CNV DEL PEAK 22(17Q21.31) WILD-TYPE
  CLUS_1                         5                              52
  CLUS_2                        22                              35
  CLUS_3                         5                              50
  CLUS_4                         4                              14
D43V3, multiclass
        clus
vv       DEL PEAK 22(17Q21.31) CNV DEL PEAK 22(17Q21.31) WILD-TYPE
  CLUS_1                         6                              53
  CLUS_2                         4                              49
  CLUS_3                        24                              39
D43V4, multiclass
        clus
vv       DEL PEAK 22(17Q21.31) CNV DEL PEAK 22(17Q21.31) WILD-TYPE
  CLUS_1                         3                              46
  CLUS_2                        26                              49
  CLUS_3                         5                              46
D43V5, multiclass
        clus
vv       DEL PEAK 22(17Q21.31) CNV DEL PEAK 22(17Q21.31) WILD-TYPE
  CLUS_1                        12                              40
  CLUS_2                         8                              43
  CLUS_3                         1                              27
  CLUS_4                        14                              41
D43V6, multiclass
        clus
vv       DEL PEAK 22(17Q21.31) CNV DEL PEAK 22(17Q21.31) WILD-TYPE
  CLUS_1                         3                              29
  CLUS_2                        11                              53
  CLUS_3                        21                              69
D43V7, multiclass
D43V8, multiclass
        clus
vv       DEL PEAK 22(17Q21.31) CNV DEL PEAK 22(17Q21.31) WILD-TYPE
  CLUS_1                         0                               4
  CLUS_2                        14                              71
  CLUS_3                        21                              76

Clustering(44) Variable = Del Peak 23(18q22.1)
D44V1, multiclass
        clus
vv       DEL PEAK 23(18Q22.1) CNV DEL PEAK 23(18Q22.1) WILD-TYPE
  CLUS_1                        3                             31
  CLUS_2                       10                             82
  CLUS_3                       33                             26
  CLUS_4                        0                              2
D44V2, multiclass
        clus
vv       DEL PEAK 23(18Q22.1) CNV DEL PEAK 23(18Q22.1) WILD-TYPE
  CLUS_1                       16                             41
  CLUS_2                       19                             38
  CLUS_3                        8                             47
  CLUS_4                        3                             15
D44V3, multiclass
        clus
vv       DEL PEAK 23(18Q22.1) CNV DEL PEAK 23(18Q22.1) WILD-TYPE
  CLUS_1                       14                             45
  CLUS_2                        9                             44
  CLUS_3                       20                             43
D44V4, multiclass
        clus
vv       DEL PEAK 23(18Q22.1) CNV DEL PEAK 23(18Q22.1) WILD-TYPE
  CLUS_1                       11                             38
  CLUS_2                       22                             53
  CLUS_3                       10                             41
D44V5, multiclass
        clus
vv       DEL PEAK 23(18Q22.1) CNV DEL PEAK 23(18Q22.1) WILD-TYPE
  CLUS_1                       14                             38
  CLUS_2                        7                             44
  CLUS_3                        7                             21
  CLUS_4                       18                             37
D44V6, multiclass
        clus
vv       DEL PEAK 23(18Q22.1) CNV DEL PEAK 23(18Q22.1) WILD-TYPE
  CLUS_1                       10                             22
  CLUS_2                       11                             53
  CLUS_3                       25                             65
D44V7, multiclass
D44V8, multiclass
        clus
vv       DEL PEAK 23(18Q22.1) CNV DEL PEAK 23(18Q22.1) WILD-TYPE
  CLUS_1                        0                              4
  CLUS_2                       18                             67
  CLUS_3                       28                             69

Clustering(45) Variable = Del Peak 24(18q23)
D45V1, multiclass
        clus
vv       DEL PEAK 24(18Q23) CNV DEL PEAK 24(18Q23) WILD-TYPE
  CLUS_1                      4                           30
  CLUS_2                      9                           83
  CLUS_3                     39                           20
  CLUS_4                      0                            2
D45V2, multiclass
        clus
vv       DEL PEAK 24(18Q23) CNV DEL PEAK 24(18Q23) WILD-TYPE
  CLUS_1                     17                           40
  CLUS_2                     22                           35
  CLUS_3                      9                           46
  CLUS_4                      4                           14
D45V3, multiclass
        clus
vv       DEL PEAK 24(18Q23) CNV DEL PEAK 24(18Q23) WILD-TYPE
  CLUS_1                     15                           44
  CLUS_2                     10                           43
  CLUS_3                     24                           39
D45V4, multiclass
        clus
vv       DEL PEAK 24(18Q23) CNV DEL PEAK 24(18Q23) WILD-TYPE
  CLUS_1                     11                           38
  CLUS_2                     27                           48
  CLUS_3                     11                           40
D45V5, multiclass
        clus
vv       DEL PEAK 24(18Q23) CNV DEL PEAK 24(18Q23) WILD-TYPE
  CLUS_1                     16                           36
  CLUS_2                      9                           42
  CLUS_3                      7                           21
  CLUS_4                     19                           36
D45V6, multiclass
        clus
vv       DEL PEAK 24(18Q23) CNV DEL PEAK 24(18Q23) WILD-TYPE
  CLUS_1                     10                           22
  CLUS_2                     16                           48
  CLUS_3                     25                           65
D45V7, multiclass
D45V8, multiclass
        clus
vv       DEL PEAK 24(18Q23) CNV DEL PEAK 24(18Q23) WILD-TYPE
  CLUS_1                      0                            4
  CLUS_2                     23                           62
  CLUS_3                     28                           69

Clustering(46) Variable = Del Peak 25(21q22.2)
D46V1, multiclass
        clus
vv       DEL PEAK 25(21Q22.2) CNV DEL PEAK 25(21Q22.2) WILD-TYPE
  CLUS_1                        0                             34
  CLUS_2                       37                             55
  CLUS_3                       23                             36
  CLUS_4                        1                              1
D46V2, multiclass
        clus
vv       DEL PEAK 25(21Q22.2) CNV DEL PEAK 25(21Q22.2) WILD-TYPE
  CLUS_1                        4                             53
  CLUS_2                       33                             24
  CLUS_3                       10                             45
  CLUS_4                       14                              4
D46V3, multiclass
        clus
vv       DEL PEAK 25(21Q22.2) CNV DEL PEAK 25(21Q22.2) WILD-TYPE
  CLUS_1                        5                             54
  CLUS_2                       14                             39
  CLUS_3                       39                             24
D46V4, multiclass
        clus
vv       DEL PEAK 25(21Q22.2) CNV DEL PEAK 25(21Q22.2) WILD-TYPE
  CLUS_1                        2                             47
  CLUS_2                       46                             29
  CLUS_3                       10                             41
D46V5, multiclass
        clus
vv       DEL PEAK 25(21Q22.2) CNV DEL PEAK 25(21Q22.2) WILD-TYPE
  CLUS_1                       21                             31
  CLUS_2                       19                             32
  CLUS_3                        4                             24
  CLUS_4                       16                             39
D46V6, multiclass
        clus
vv       DEL PEAK 25(21Q22.2) CNV DEL PEAK 25(21Q22.2) WILD-TYPE
  CLUS_1                        5                             27
  CLUS_2                       28                             36
  CLUS_3                       27                             63
D46V7, multiclass
D46V8, multiclass
        clus
vv       DEL PEAK 25(21Q22.2) CNV DEL PEAK 25(21Q22.2) WILD-TYPE
  CLUS_1                        0                              4
  CLUS_2                       33                             52
  CLUS_3                       27                             70

Clustering(47) Variable = Del Peak 26(21q22.3)
D47V1, multiclass
        clus
vv       DEL PEAK 26(21Q22.3) CNV DEL PEAK 26(21Q22.3) WILD-TYPE
  CLUS_1                        0                             34
  CLUS_2                       38                             54
  CLUS_3                       22                             37
  CLUS_4                        0                              2
D47V2, multiclass
        clus
vv       DEL PEAK 26(21Q22.3) CNV DEL PEAK 26(21Q22.3) WILD-TYPE
  CLUS_1                        5                             52
  CLUS_2                       31                             26
  CLUS_3                        9                             46
  CLUS_4                       15                              3
D47V3, multiclass
        clus
vv       DEL PEAK 26(21Q22.3) CNV DEL PEAK 26(21Q22.3) WILD-TYPE
  CLUS_1                        5                             54
  CLUS_2                       12                             41
  CLUS_3                       40                             23
D47V4, multiclass
        clus
vv       DEL PEAK 26(21Q22.3) CNV DEL PEAK 26(21Q22.3) WILD-TYPE
  CLUS_1                        2                             47
  CLUS_2                       46                             29
  CLUS_3                        9                             42
D47V5, multiclass
        clus
vv       DEL PEAK 26(21Q22.3) CNV DEL PEAK 26(21Q22.3) WILD-TYPE
  CLUS_1                       21                             31
  CLUS_2                       19                             32
  CLUS_3                        3                             25
  CLUS_4                       16                             39
D47V6, multiclass
        clus
vv       DEL PEAK 26(21Q22.3) CNV DEL PEAK 26(21Q22.3) WILD-TYPE
  CLUS_1                        4                             28
  CLUS_2                       30                             34
  CLUS_3                       25                             65
D47V7, multiclass
D47V8, multiclass
        clus
vv       DEL PEAK 26(21Q22.3) CNV DEL PEAK 26(21Q22.3) WILD-TYPE
  CLUS_1                        0                              4
  CLUS_2                       35                             50
  CLUS_3                       24                             73
                           V1                            V2 
                    "CN_CNMF"            "METHLYATION_CNMF" 
                           V3                            V4 
               "MRNASEQ_CNMF"       "MRNASEQ_CHIERARCHICAL" 
                           V5                            V6 
                "MIRSEQ_CNMF"        "MIRSEQ_CHIERARCHICAL" 
                           V7                            V8 
         "MIRSEQ_MATURE_CNMF" "MIRSEQ_MATURE_CHIERARCHICAL" 
> q(save="no")
