index	chromosome	region_start	region_end	peak_start	peak_end	enlarged_peak_start	enlarged_peak_end	n_genes_in_region	genes_in_region	n_genes_in_peak	genes_in_peak	n_genes_on_chip	genes_on_chip	top 3
1	1	234277251	235555451	235076299	235084043	234933506	235128860	0	[LOC100506810]	0	[TOMM20]	
2	1	149881398	156222016	150585939	150622696	149995998	151423932	47	hsa-mir-4257,ARNT,CTSK,CTSS,ECM1,ENSA,MCL1,PI4KB,PSMB4,PSMD4,RFX5,VPS72,PIP5K1A,ANXA9,SELENBP1,PRPF3,SETDB1,SEMA6C,MLLT11,VPS45,POGZ,RPRD2,CA14,TMOD4,CERS2,APH1A,PLEKHO1,MRPS21,ADAMTSL4,C1orf56,GOLPH3L,FAM63A,CDC42SE1,ZNF687,PRUNE,SCNM1,TNFAIP8L2,C1orf54,TARS2,ANP32E,HORMAD1,GABPB2,C1orf51,BNIPL,LYSMD1,MIR4257,TNFAIP8L2-SCNM1,	2	ENSA,GOLPH3L,	
3	1	10708396	11093944	10876600	11018065	10687726	11128075	7	PEX14,EXOSC10,SRM,MASP2,TARDBP,CASZ1,C1orf127,	1	C1orf127,	
4	3	155935333	197538677	184438311	184457639	165343107	184862856	102	hsa-mir-1224,hsa-mir-569,hsa-mir-551b,ACTL6A,BCHE,AP2M1,CLCN2,DVL3,ECT2,EIF4G1,EPHB3,MECOM,GHSR,NDUFB5,CLDN11,SERPINI1,SERPINI2,PIK3CA,PLD1,POLR2H,PRKCI,PSMD2,SKIL,SLC2A2,SOX2,TERC,THPO,SEC62,FXR1,CHRD,TNFSF10,EIF2B5,USP13,ECE2,ABCC5,ALG3,KCNMB2,PDCD10,NLGN1,TNIK,MCF2L2,ATP11B,VPS8,GPR160,LAMP3,KCNMB3,GOLIM4,ZNF639,PEX5L,DCUN1D1,KLHL24,ABCF3,PARL,MFN1,YEATS2,MYNN,EIF5A2,MCCC1,MRPL47,NCEH1,SLC7A14,GNB4,MAGEF1,ZMAT3,FNDC3B,TBL1XR1,ZBBX,LRRC31,MAP6D1,PHC3,SPATA16,B3GNT5,ARPM1,KLHL6,VWA5B2,EGFEM1P,CAMK2N2,DNAJC19,FAM131A,TTC14,WDR49,LRRC34,HTR3C,HTR3D,RPL22L1,NAALADL2,HTR3E,C3orf70,CCDC39,LRRIQ4,SAMD7,SOX2-OT,TMEM212,FLJ46066,LOC646168,SNORD66,MIR551B,MIR569,LOC100128164,MIR1224,LOC100505687,MIR4789,	0	[MAGEF1]	
5	5	34754305	50133376	41600324	42004327	35779936	44521494	58	hsa-mir-1274a,hsa-mir-580,C6,C7,C9,DAB2,FGF10,FYB,GDNF,GHR,HMGCS1,IL7R,LIFR,OXCT1,PRKAA1,PTGER4,RPL37,SEPP1,SKP2,SLC1A3,ZNF131,OSMR,NUP155,PAIP1,NNT,TTC33,NIPBL,FBXO4,WDR70,CCL28,C5orf28,C5orf42,SPEF2,CARD6,LMBRD2,HEATR7B2,EGFLAM,NADKD1,UGT3A1,CAPSL,LOC153684,UGT3A2,NIM1,RANBP3L,RICTOR,C5orf51,PLCXD3,C5orf34,C5orf39,SNORD72,LOC646719,LOC648987,MIR580,CCDC152,LOC100132356,MIR3650,LOC100506548,EGFLAM-AS4,	3	OXCT1,FBXO4,C5orf51,	
6	6	39827804	46349116	43657737	43657737	43598755	43810974	5	VEGFA,MAD2L1BP,GTPBP2,MRPS18A,RSPH9,	0	[MRPS18A]	
7	6	107111381	107360290	107120782	107166555	107099411	107221059	2	QRSL1,LOC100422737,	1	LOC100422737,	
8	6	63821584	64376392	64062385	64154037	63903403	64323654	2	PTP4A1,LGSN,	0	[LGSN]	
9	7	85469299	101142334	92341976	92389516	92117993	92556768	6	CDK6,PEX1,RBM48,MGC16142,FAM133B,LOC728066,	1	CDK6,	
10	7	53946260	55982830	55082175	55099784	55027846	55440320	2	EGFR,LANCL2,	1	EGFR,	
11	7	705284	9276071	705284	785560	705284	13958762	102	hsa-mir-589,hsa-mir-339,ACTB,ETV1,GNA12,GPER,ICA1,LFNG,NUDT1,NDUFA4,PDGFA,PMS2,PRKAR1B,RAC1,RPA3,FSCN1,ZNF12,AIMP2,MAFK,MAD1L1,EIF3B,CYTH3,PHF14,KIAA0415,ARL4A,KDELR2,ADAP1,IQCE,SUN1,WIPI2,INTS1,EIF2AK1,SNX8,FTSJ2,NXPH1,GET4,CCZ1,MIOS,RNF216,TMEM106B,ZNF853,CYP2W1,HEATR2,ZDHHC4,CHST12,RADIL,PAPOLB,C1GALT1,FAM20C,RBAK,C7orf26,MICALL2,FBXL18,TTYH3,USP42,PSMG3,C7orf50,CARD11,TNRC18,C7orf70,SCIN,ZFAND2A,COX19,GLCCI1,KIAA1908,GPR146,AMZ1,PER4,TMEM184A,VWDE,BRAT1,SDK1,FOXK1,MMD2,DAGLB,CCZ1B,THSD7A,SLC29A4,RSPH10B,TFAMP1,UNCX,COL28A1,LOC389458,ELFN1,GRID2IP,ZNF815,RNF216P1,PMS2CL,FLJ44511,LOC442497,MIR339,ZNF890P,OCM,MIR589,RSPH10B2,LOC729852,LOC100131257,LOC100288524,RBAK-LOC389458,MIR4648,MIR4655,MIR4656,	7	PDGFA,PRKAR1B,HEATR2,FAM20C,FLJ44511,LOC442497,LOC100288524,	
12	8	112684338	145232496	128716879	128722935	128714853	128726770	0	[MYC]	0	[MYC]	
13	8	8459696	14522350	11553144	11633282	11547971	11638878	2	GATA4,NEIL2,	2	GATA4,NEIL2,	
14	9	4772328	6202383	5564748	5603231	5047456	5708859	9	INSL4,JAK2,RLN1,RLN2,INSL6,CD274,C9orf46,KIAA1432,PDCD1LG2,	3	CD274,C9orf46,PDCD1LG2,	
15	9	139793923	140291031	139968796	140086045	139810529	140290821	38	ABCA2,C8G,ENTPD2,FUT7,GRIN1,PTGDS,TRAF2,SSNA1,CLIC3,TUBB4B,MAN1B1,COBRA1,NDOR1,ANAPC2,DPP7,FBXW5,C9orf167,EXD3,NPDC1,SAPCD2,UAP1L1,TMEM203,SLC34A3,LCN12,C9orf142,TPRN,C9orf169,LRRC26,LCNL1,C9orf139,FAM166A,C9orf173,NRARP,RNF224,RNF208,LOC100129722,LOC100289341,MIR3621,	19	GRIN1,SSNA1,TUBB4B,MAN1B1,NDOR1,ANAPC2,DPP7,SAPCD2,UAP1L1,TMEM203,SLC34A3,TPRN,C9orf169,LRRC26,FAM166A,RNF224,RNF208,LOC100289341,MIR3621,	
16	10	122349537	124094732	123240578	123320471	123172835	123398895	1	FGFR2,	1	FGFR2,	
17	10	76983952	78393903	77082781	77136073	70892127	85575481	112	hsa-mir-606,ADK,ANXA7,ANXA11,CAMK2G,COL13A1,EIF4EBP2,HK1,KCNMA1,MAT1A,NODAL,P4HA1,PCBD1,PLAU,PPA1,PPP3CB,PRF1,PSAP,RPS24,SFTPD,SUPV3L1,TACR2,VCL,VDAC2,NDST2,MBL1P,SGPL1,DLG5,CHST3,VPS26A,SEC24C,SPOCK2,PPIF,MICU1,NRG3,POLR3A,ECD,KIAA0913,DNAJC9,KAT6B,TSPAN15,NUDT13,AP3M1,KIAA1274,NEUROG3,ASCC1,MRPS16,DUSP13,DDIT4,DNAJB12,LRRC20,SLC29A3,H2AFY2,SAR1A,ZMIZ1,MYOZ1,CDH23,NPFFR1,C10orf54,SYNPO2L,FAM213A,HKDC1,TSPAN14,C10orf11,C10orf58,DYDC2,PLA2G12B,ZNF503,AIFM2,MCU,CHCHD1,ZMYND17,TTC18,COMTD1,ANAPC16,ADAMTS14,SAMD8,DYDC1,EIF5AL1,USP54,FUT11,OIT3,LOC219347,PLAC9,ZCCHC24,UNC5B,C10orf35,TYSND1,C10orf27,ZNF503-AS1,LOC283050,FAM149B1,DUPD1,SH2D4B,C10orf105,C10orf55,C10orf103,LOC439990,LOC642361,LOC650623,SFTPA1,LOC728978,AGAP5,BMS1P4,SFTPA2,LOC100128292,ZNF503-AS2,LOC100132987,LOC100288974,MIR1256,LOC100507331,MIR4676,	1	ZNF503-AS1,	
18	11	67799423	71179869	69514341	69530753	69151011	69594005	4	CCND1,FGF4,FGF19,ORAOV1,	1	FGF19,	
19	11	34435551	36321120	35244574	35257677	35244058	35259407	1	CD44,	1	CD44,	
20	12	22174492	28288716	25386944	25402069	25348931	25414348	2	KRAS,LYRM5,	1	KRAS,	
21	12	63582333	71341854	69489482	69495486	69124408	70035437	14	hsa-mir-1279,CPM,LYZ,MDM2,YEATS4,CCT2,FRS2,CPSF6,SLC35E3,NUP107,LRRC10,MIR1279,MIR3913-2,MIR3913-1,	0	[CPM]	
22	13	73382487	74426332	73691528	73704973	73646859	73944461	1	KLF5,	0	[KLF5]	
23	13	30946933	35648024	31922220	31989640	30756131	35518102	23	ALOX5AP,BRCA2,HMGB1,RFC3,KL,FRY,USPL1,N4BP2L2,HSPH1,PDS5B,NBEA,KATNAL1,C13orf33,STARD13,N4BP2L1,CG030,RXFP2,TEX26,B3GALTL,EEF1DP3,ZAR1L,LINC00426,TEX26-AS1,	0	[B3GALTL]	
24	15	88368060	101884307	91075129	91183967	90778486	91264068	8	BLM,IQGAP1,GABARAPL3,NGRN,CRTC3,ZNF774,C15orf58,TTLL13,	1	CRTC3,	
25	17	33769837	40366350	37861388	37861388	37855834	37875909	1	ERBB2,	1	ERBB2,	
26	18	18697629	22302127	19629239	19667074	19598429	19766491	1	GATA6,	0	[GATA6]	
27	19	28240494	33432456	30307098	30308200	30289536	30358072	1	CCNE1,	1	CCNE1,	
28	20	41371668	62219837	52341686	52374225	52151185	52556562	2	ZNF217,SUMO1P1,	0	[SUMO1P1]	
29	X	141322841	146897419	142176169	142195083	138602776	154905589	203	hsa-mir-1184-3,hsa-mir-1184-2,hsa-mir-1184-1,hsa-mir-718,hsa-mir-105-2,hsa-mir-452,hsa-mir-4330,hsa-mir-2114,hsa-mir-514-3,hsa-mir-513c,hsa-mir-891a,hsa-mir-891b,hsa-mir-320d-2,hsa-mir-505,ABCD1,ARHGAP4,ATP2B3,ATP6AP1,AVPR2,BGN,CDR1,CETN2,CLIC2,CNGA2,CTAG1B,TEX28,DKC1,DNASE1L1,DUSP9,EMD,F8,F9,FLNA,FMR1,AFF2,G6PD,GABRA3,GABRE,OPN1MW,GDI1,HCFC1,HMGB3,IDH3G,IDS,IL9R,IRAK1,L1CAM,MAGEA1,MAGEA2,MAGEA3,MAGEA4,MAGEA5,MAGEA6,MAGEA8,MAGEA9,MAGEA10,MAGEA11,MAGEA12,MCF2,MECP2,MPP1,MTCP1,MTM1,PLXNB3,OPN1LW,RENBP,RPL10,SLC6A8,SOX3,SSR4,VAMP7,TAZ,VBP1,ZNF185,NAA10,F8A1,UBL4A,TMEM187,LAGE3,SLC10A3,TKTL1,IKBKG,MTMR1,FAM50A,CXorf1,GPR50,MAGEC1,MAMLD1,BCAP31,SPRY3,ZNF275,TREX2,LDOC1,SRPK3,SNORA70,PNMA3,SPANXA1,CTAG2,NSDHL,MAGEC2,TMLHE,PLXNA3,HAUS7,GABRQ,PDZD4,FAM3A,SPANXD,SPANXC,FUNDC2,PRRG3,BRCC3,CD99L2,H2AFB3,TMEM185A,SLITRK2,PNMA6A,FATE1,CXorf40A,FAM58A,PNMA5,RAB39B,SLITRK4,SPANXN3,MAGEC3,PASD1,GAB3,PNCK,ZFP92,CSAG1,FMR1NB,SPANXE,SPANXF1,VMA21,CTAG1A,MAGEA2B,ATP11C,RP1-177G6.2,LINC00204B,CXorf66,UBE2NL,CSAG3,MIR105-1,MIR105-2,SPANXN4,H2AFB2,H2AFB1,F8A2,F8A3,SPANXN1,SPANXN2,CXorf40B,MIR452,MIR505,MIR506,MIR507,MIR508,MIR509-1,MIR510,MIR514A1,MIR514A2,MIR514A3,SPANXA2-OT1,SNORA36A,SNORA56,MAGEA9B,OPN1MW2,CSAG2,SPANXB1,SPANXA2,MIR767,FMR1-AS1,MIR509-2,MIR890,MIR891B,MIR888,MIR892B,MIR509-3,MIR891A,MIR892A,CXorf51A,HSFX2,LOC100131434,CXorf68,LINC00204A,CXorf51B,SPANXB2,MTCP1NB,LOC100272228,PNMA6C,PNMA6D,MIR1184-1,MIR320D2,MIR718,MIR2114,MIR514B,MIR3202-2,MIR4330,MIR1184-3,MIR1184-2,MIR3202-1,HSFX1,LOC100507404,MAGEA10-MAGEA5,	0	[SPANXN4]	
