
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/GDAC_TopgenesforCluster.36.4074/Topgenes_v1.R")
> result <- main("-s/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/GDAC_TopgenesforCluster.36.4074/", "-m/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MethylationPreprocess/THCA-TP/3527777/THCA-TP.meth.by_max_stddev.data.txt", "-u5266", "-ooutputprefix")
Cluster size 5266 broken into 3638 1628 
Cluster size 3638 broken into 1868 1770 
Cluster size 1868 broken into 941 927 
Done cluster 941 
Done cluster 927 
Done cluster 1868 
Cluster size 1770 broken into 1297 473 
Done cluster 1297 
Done cluster 473 
Done cluster 1770 
Done cluster 3638 
Cluster size 1628 broken into 564 1064 
Done cluster 564 
Done cluster 1064 
Done cluster 1628 
> q(save="no")
