Clinical Features Time to Death AGE GENDER KARNOFSKY.PERFORMANCE.SCORE HISTOLOGICAL.TYPE RADIATIONS.RADIATION.REGIMENINDICATION nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q 1p gain 0 (0%) 514 0.62575 1 0.59283 1 0.6065 1 0.86815 1 1 1 0.58912 1 1q gain 0 (0%) 509 0.96402 1 0.48331 1 1 1 0.97941 1 0.81557 1 0.73311 1 2p gain 0 (0%) 533 0.38519 1 0.1119 1 0.10117 1 0.30089 1 0.14395 1 0.45245 1 2q gain 0 (0%) 535 0.52201 1 0.31766 1 0.31444 1 0.73675 1 0.11873 1 0.29319 1 3p gain 0 (0%) 522 0.11782 1 0.55239 1 1 1 0.83665 1 1 1 0.42088 1 3q gain 0 (0%) 522 0.12036 1 0.45595 1 1 1 0.89187 1 1 1 0.42088 1 4p gain 0 (0%) 537 0.078414 1 0.067549 1 0.7907 1 0.12732 1 0.51967 1 0.045741 1 4q gain 0 (0%) 538 0.030005 1 0.33425 1 0.78854 1 0.14638 1 0.49528 1 0.0070912 1 5p gain 0 (0%) 523 0.68117 1 0.12419 1 0.56281 1 0.043501 1 0.013188 1 0.14682 1 5q gain 0 (0%) 530 0.49146 1 0.88345 1 0.3741 1 0.30127 1 0.01723 1 0.2418 1 6p gain 0 (0%) 545 0.098122 1 0.097472 1 1 1 0.0002543 0.118 1 1 0.44514 1 6q gain 0 (0%) 543 0.13091 1 0.04408 1 0.74442 1 0.00025424 0.118 1 1 0.72773 1 7p gain 0 (0%) 125 0.0098686 1 1.6087e-05 0.00754 0.91736 1 0.53036 1 0.042552 1 0.22746 1 7q gain 0 (0%) 121 0.012242 1 2.0957e-05 0.00981 0.52838 1 0.58403 1 0.026548 1 0.26585 1 8p gain 0 (0%) 526 0.77864 1 0.53622 1 0.5393 1 0.40233 1 0.34972 1 0.39218 1 8q gain 0 (0%) 521 0.81968 1 0.19709 1 0.34542 1 0.38943 1 1 1 0.55516 1 9p gain 0 (0%) 535 0.23691 1 0.036597 1 0.31444 1 0.0062213 1 1 1 0.60257 1 9q gain 0 (0%) 520 0.032621 1 0.045691 1 0.061187 1 0.02558 1 0.55883 1 0.3256 1 10p gain 0 (0%) 541 0.0028016 1 9.3069e-05 0.0435 0.029504 1 0.00025389 0.118 0.41474 1 1 1 11p gain 0 (0%) 548 0.55871 1 0.38014 1 0.64939 1 0.84148 1 1 1 1 1 11q gain 0 (0%) 545 0.14705 1 0.20699 1 0.25372 1 0.091302 1 0.28796 1 0.44514 1 12p gain 0 (0%) 511 0.70678 1 0.093525 1 0.86841 1 0.93013 1 0.5418 1 0.60306 1 12q gain 0 (0%) 521 0.76992 1 0.44838 1 0.34542 1 0.55432 1 0.30349 1 0.42368 1 13q gain 0 (0%) 549 0.98574 1 0.10514 1 0.061082 1 NA NA 1 1 0.029368 1 14q gain 0 (0%) 545 0.54171 1 0.80664 1 0.44262 1 0.51437 1 0.021859 1 0.68242 1 15q gain 0 (0%) 546 0.97373 1 0.083743 1 0.68496 1 0.29238 1 0.097379 1 0.38003 1 16p gain 0 (0%) 535 0.042637 1 0.02346 1 0.12958 1 0.70956 1 0.5651 1 0.029368 1 16q gain 0 (0%) 535 0.043549 1 0.065328 1 0.042106 1 0.97094 1 0.5651 1 0.10939 1 17p gain 0 (0%) 541 0.20077 1 0.32521 1 1 1 0.091302 1 0.19017 1 0.74514 1 17q gain 0 (0%) 533 0.15684 1 0.40894 1 0.81523 1 0.031764 1 0.14395 1 1 1 18p gain 0 (0%) 526 0.87155 1 0.94818 1 1 1 0.096364 1 1 1 0.66858 1 18q gain 0 (0%) 524 0.79976 1 0.91797 1 0.69699 1 0.30109 1 0.74741 1 0.8375 1 19p gain 0 (0%) 380 0.12648 1 0.70828 1 0.92515 1 0.79526 1 0.42544 1 0.42734 1 19q gain 0 (0%) 403 0.088479 1 0.44451 1 0.76884 1 0.77311 1 0.87259 1 0.83642 1 20p gain 0 (0%) 376 0.69397 1 0.0013635 0.629 0.6418 1 0.37082 1 0.78275 1 0.32334 1 20q gain 0 (0%) 378 0.48516 1 0.0026 1 0.57425 1 0.4064 1 0.48287 1 0.27598 1 21q gain 0 (0%) 518 0.12574 1 0.87373 1 0.85759 1 0.63356 1 0.12251 1 1 1 22q gain 0 (0%) 541 0.98225 1 0.38379 1 1 1 0.96754 1 1 1 0.51617 1 Xq gain 0 (0%) 549 0.13346 1 0.59006 1 1 1 NA NA 0.13499 1 1 1 1p loss 0 (0%) 547 0.030396 1 0.71733 1 0.65291 1 0.86836 1 0.21505 1 1 1 1q loss 0 (0%) 548 0.71236 1 0.068165 1 0.64939 1 0.087318 1 1 1 1 1 2p loss 0 (0%) 542 0.17408 1 0.50706 1 0.20377 1 0.75962 1 1 1 1 1 2q loss 0 (0%) 543 0.2295 1 0.73308 1 0.32755 1 0.75962 1 1 1 0.72773 1 3p loss 0 (0%) 530 0.27928 1 0.02136 1 1 1 0.84583 1 0.66131 1 0.031255 1 3q loss 0 (0%) 536 0.7539 1 0.2246 1 0.4403 1 0.70814 1 1 1 0.41235 1 4p loss 0 (0%) 527 0.13385 1 0.28624 1 0.14196 1 0.82531 1 1 1 0.12182 1 4q loss 0 (0%) 528 0.20149 1 0.21981 1 0.67048 1 0.16715 1 0.69376 1 0.65372 1 5p loss 0 (0%) 531 0.052991 1 0.26829 1 0.82121 1 0.50316 1 0.64388 1 0.030258 1 5q loss 0 (0%) 532 0.058376 1 0.28601 1 0.64541 1 0.78565 1 1 1 0.14251 1 6p loss 0 (0%) 505 0.0090038 1 0.72937 1 0.87753 1 0.71055 1 0.47541 1 0.87024 1 6q loss 0 (0%) 473 0.30121 1 0.61564 1 0.5346 1 0.5807 1 0.40921 1 0.79293 1 7p loss 0 (0%) 547 0.5047 1 0.65429 1 1 1 0.60961 1 1 1 1 1 7q loss 0 (0%) 548 0.60629 1 0.36014 1 1 1 NA NA 1 1 1 1 8p loss 0 (0%) 518 0.94452 1 0.40205 1 0.20853 1 0.54078 1 1 1 0.035363 1 8q loss 0 (0%) 531 0.97471 1 0.41422 1 0.49736 1 0.13326 1 0.64388 1 0.0066281 1 9p loss 0 (0%) 391 0.66486 1 0.51704 1 0.84813 1 0.42683 1 0.15898 1 0.18813 1 9q loss 0 (0%) 489 0.36887 1 0.54302 1 0.01394 1 0.38382 1 0.88517 1 0.38516 1 10p loss 0 (0%) 122 0.00039309 0.182 5.7089e-09 2.69e-06 0.34523 1 0.35799 1 0.00011186 0.0521 0.73998 1 10q loss 0 (0%) 109 0.0016859 0.776 9.2531e-07 0.000435 0.51426 1 0.096758 1 0.0030167 1 1 1 11p loss 0 (0%) 488 0.29499 1 0.20775 1 0.22163 1 0.8904 1 0.24638 1 0.38914 1 11q loss 0 (0%) 497 0.98599 1 0.78257 1 0.77168 1 0.93379 1 0.87198 1 0.044696 1 12p loss 0 (0%) 514 0.6554 1 0.80077 1 0.86375 1 0.89009 1 0.50665 1 0.58912 1 12q loss 0 (0%) 517 0.63964 1 0.87257 1 0.8591 1 0.60992 1 0.47026 1 0.70647 1 13q loss 0 (0%) 416 0.89503 1 0.53868 1 0.54469 1 0.53787 1 0.44783 1 0.91497 1 14q loss 0 (0%) 432 0.95867 1 0.94702 1 0.7522 1 0.76931 1 0.39348 1 0.6569 1 15q loss 0 (0%) 490 0.45757 1 0.19771 1 0.13191 1 0.48627 1 0.27211 1 0.30748 1 16p loss 0 (0%) 529 0.16095 1 0.12551 1 0.51402 1 0.092929 1 1 1 1 1 16q loss 0 (0%) 512 0.087863 1 0.95954 1 1 1 0.20432 1 1 1 0.85966 1 17p loss 0 (0%) 517 0.45525 1 0.29903 1 0.72221 1 0.64262 1 0.77621 1 0.85143 1 17q loss 0 (0%) 533 0.91987 1 0.32614 1 0.81523 1 0.61983 1 1 1 0.61598 1 18p loss 0 (0%) 508 0.20652 1 0.55239 1 1 1 0.62466 1 0.44807 1 0.40184 1 18q loss 0 (0%) 513 0.26484 1 0.28483 1 0.39871 1 0.34925 1 0.39144 1 0.72265 1 19p loss 0 (0%) 539 0.62038 1 0.19399 1 0.77524 1 0.5795 1 1 1 0.76311 1 19q loss 0 (0%) 534 0.18489 1 0.68535 1 1 1 0.27613 1 0.20579 1 0.60497 1 20p loss 0 (0%) 541 0.45044 1 0.13648 1 0.35668 1 0.7003 1 1 1 1 1 20q loss 0 (0%) 542 0.46751 1 0.45632 1 0.52645 1 0.61184 1 1 1 0.50846 1 21q loss 0 (0%) 527 0.82753 1 0.22757 1 0.21223 1 0.62862 1 0.70884 1 0.65844 1 22q loss 0 (0%) 412 0.57113 1 0.017222 1 0.92041 1 0.61315 1 0.75976 1 0.67261 1 Xq loss 0 (0%) 541 0.23745 1 0.024853 1 0.75941 1 0.91351 1 1 1 0.51617 1