Clinical Features Time to Death AGE GENDER KARNOFSKY.PERFORMANCE.SCORE HISTOLOGICAL.TYPE RADIATIONS.RADIATION.REGIMENINDICATION nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Amp Peak 1(1p36.21) 0 (0%) 465 0.094704 1 0.34815 1 0.28349 1 0.65288 1 0.31438 1 0.80129 1 Amp Peak 2(1q32.1) 0 (0%) 404 0.47992 1 0.29854 1 0.62433 1 0.27935 1 0.27522 1 0.91738 1 Amp Peak 3(1q44) 0 (0%) 458 0.5339 1 0.85722 1 0.29725 1 0.59866 1 0.62655 1 0.80801 1 Amp Peak 4(2p24.3) 0 (0%) 507 0.098609 1 0.1745 1 0.3408 1 0.58252 1 0.69039 1 0.86689 1 Amp Peak 5(3q26.33) 0 (0%) 447 0.31174 1 0.035814 1 0.82455 1 0.68765 1 0.032807 1 0.90711 1 Amp Peak 6(4p16.3) 0 (0%) 507 0.52453 1 0.514 1 0.52561 1 0.42926 1 1 1 0.2388 1 Amp Peak 7(4q12) 0 (0%) 449 0.66298 1 0.57479 1 0.22027 1 0.59707 1 0.41636 1 0.34592 1 Amp Peak 8(7p11.2) 0 (0%) 68 4.0112e-06 0.00166 3.8842e-09 1.63e-06 0.42822 1 0.035121 1 0.046325 1 0.050457 1 Amp Peak 9(7q11.21) 0 (0%) 108 0.0002835 0.115 1.3198e-07 5.5e-05 0.27252 1 0.65765 1 0.010549 1 0.062927 1 Amp Peak 10(7q21.2) 0 (0%) 94 0.0018073 0.732 1.5443e-05 0.00635 0.5627 1 0.48966 1 0.036889 1 0.14334 1 Amp Peak 11(7q31.2) 0 (0%) 101 0.037099 1 0.0018364 0.742 0.36911 1 0.51349 1 0.14258 1 0.056545 1 Amp Peak 12(7q36.1) 0 (0%) 96 0.087268 1 0.0028237 1 0.49228 1 0.73182 1 0.11546 1 0.27585 1 Amp Peak 13(8q24.21) 0 (0%) 489 0.359 1 0.13009 1 0.27516 1 0.80441 1 0.88517 1 0.47208 1 Amp Peak 14(11p13) 0 (0%) 527 0.95769 1 0.2173 1 0.40618 1 0.31577 1 0.22598 1 0.5134 1 Amp Peak 15(12p13.32) 0 (0%) 473 0.66418 1 0.093215 1 1 1 0.69516 1 1 1 1 1 Amp Peak 16(12q14.1) 0 (0%) 424 0.20107 1 0.68424 1 0.40928 1 0.80807 1 0.74492 1 0.82741 1 Amp Peak 17(12q15) 0 (0%) 463 0.86085 1 0.67904 1 0.34577 1 0.911 1 0.68345 1 0.21036 1 Amp Peak 18(13q34) 0 (0%) 522 0.80314 1 0.82407 1 0.33858 1 0.83767 1 0.52874 1 0.68822 1 Amp Peak 19(14q32.33) 0 (0%) 520 0.15922 1 0.022381 1 0.58192 1 0.25424 1 0.2087 1 1 1 Amp Peak 20(17p13.2) 0 (0%) 508 0.93164 1 0.54064 1 0.33562 1 0.10948 1 0.68504 1 0.61506 1 Amp Peak 21(17q25.1) 0 (0%) 477 0.13856 1 0.087299 1 0.2554 1 0.83741 1 1 1 0.6872 1 Amp Peak 22(19p13.2) 0 (0%) 318 0.10128 1 0.82145 1 1 1 0.44143 1 0.51744 1 1 1 Amp Peak 23(19q12) 0 (0%) 353 0.26059 1 0.52924 1 0.58651 1 0.99565 1 0.71801 1 0.7744 1 Amp Peak 24(21q21.1) 0 (0%) 488 0.52643 1 0.019785 1 0.68397 1 0.54875 1 0.37372 1 0.56595 1 Del Peak 1(1p36.32) 0 (0%) 457 0.37355 1 0.86665 1 0.050782 1 0.9987 1 0.43014 1 0.80762 1 Del Peak 2(1p36.23) 0 (0%) 421 0.94306 1 0.025466 1 0.010401 1 0.19279 1 0.26332 1 0.6653 1 Del Peak 3(1p32.3) 0 (0%) 493 0.73486 1 0.067731 1 0.15911 1 0.68683 1 1 1 0.1013 1 Del Peak 4(1p22.1) 0 (0%) 506 0.25722 1 0.3446 1 1 1 0.58494 1 0.089903 1 1 1 Del Peak 5(1q42.11) 0 (0%) 507 0.096532 1 0.06795 1 1 1 0.010213 1 1 1 0.1808 1 Del Peak 6(1q44) 0 (0%) 521 0.31474 1 0.301 1 0.85055 1 0.066915 1 1 1 0.84402 1 Del Peak 7(2q22.1) 0 (0%) 509 0.32966 1 0.10217 1 0.19771 1 0.68554 1 0.81557 1 0.1226 1 Del Peak 8(2q37.1) 0 (0%) 497 0.72994 1 0.32693 1 0.14607 1 0.65713 1 1 1 0.36039 1 Del Peak 9(3p21.1) 0 (0%) 500 0.021023 1 0.010876 1 0.88271 1 0.69778 1 0.50127 1 0.059079 1 Del Peak 10(3q13.31) 0 (0%) 497 0.50359 1 0.058587 1 0.3837 1 0.30584 1 0.87198 1 0.12774 1 Del Peak 11(3q22.1) 0 (0%) 497 0.62514 1 0.12767 1 1 1 0.48995 1 0.87198 1 0.44238 1 Del Peak 12(3q29) 0 (0%) 489 0.27692 1 0.23294 1 1 1 0.45867 1 1 1 0.24646 1 Del Peak 13(4p16.3) 0 (0%) 476 0.29454 1 0.028071 1 0.25532 1 0.15368 1 0.50711 1 0.084013 1 Del Peak 14(4q34.3) 0 (0%) 463 0.14949 1 0.084944 1 0.058525 1 0.65979 1 0.56108 1 0.1053 1 Del Peak 15(5q35.3) 0 (0%) 500 0.016672 1 0.1713 1 1 1 0.56378 1 1 1 0.43071 1 Del Peak 16(6q22.31) 0 (0%) 400 0.054306 1 0.35266 1 0.097354 1 0.45388 1 0.12223 1 0.83763 1 Del Peak 17(6q26) 0 (0%) 380 0.21424 1 0.71273 1 0.1894 1 0.70203 1 0.12824 1 0.69155 1 Del Peak 18(8p23.2) 0 (0%) 486 0.17056 1 0.035516 1 0.59489 1 0.6344 1 0.78201 1 0.57104 1 Del Peak 19(9p21.3) 0 (0%) 149 0.036988 1 0.00035606 0.145 0.4928 1 0.092612 1 0.19468 1 0.53551 1 Del Peak 20(9q34.2) 0 (0%) 482 0.41668 1 0.76839 1 1 1 0.49757 1 0.61506 1 0.68063 1 Del Peak 21(10p15.3) 0 (0%) 102 2.2898e-05 0.00939 7.2708e-08 3.04e-05 0.092726 1 0.59632 1 0.022276 1 0.40969 1 Del Peak 22(10p13) 0 (0%) 100 1.4882e-05 0.00613 3.4486e-07 0.000143 0.041482 1 0.88366 1 0.019926 1 0.90498 1 Del Peak 23(10p11.23) 0 (0%) 96 2.2342e-06 0.000927 2.1151e-08 8.86e-06 0.10896 1 0.23232 1 0.0032733 1 0.54545 1 Del Peak 24(10q23.31) 0 (0%) 61 6.1468e-05 0.0251 5.656e-06 0.00234 0.67723 1 0.07507 1 0.0051176 1 0.66058 1 Del Peak 25(10q26.3) 0 (0%) 60 0.0031931 1 5.3312e-05 0.0218 0.5763 1 0.061306 1 0.018761 1 1 1 Del Peak 26(11p15.5) 0 (0%) 427 0.032606 1 0.0053862 1 0.17722 1 0.24245 1 0.43614 1 0.74241 1 Del Peak 27(11p11.2) 0 (0%) 452 0.077136 1 0.64013 1 0.14369 1 0.79634 1 0.19741 1 0.81186 1 Del Peak 28(11q14.1) 0 (0%) 458 0.76314 1 0.8148 1 0.29725 1 0.5375 1 0.38228 1 0.065819 1 Del Peak 29(12p13.1) 0 (0%) 478 0.35647 1 0.85917 1 0.52341 1 0.8459 1 0.71251 1 0.89278 1 Del Peak 30(12q12) 0 (0%) 477 0.66709 1 0.73647 1 1 1 0.81013 1 1 1 0.2267 1 Del Peak 31(12q15) 0 (0%) 476 0.63494 1 0.71719 1 0.45146 1 0.18554 1 0.39377 1 0.18108 1 Del Peak 32(13q14.2) 0 (0%) 320 0.55028 1 0.64811 1 0.79185 1 0.82821 1 0.51491 1 0.57671 1 Del Peak 33(14q13.1) 0 (0%) 379 0.81702 1 0.5913 1 0.22312 1 0.2616 1 0.1619 1 0.76704 1 Del Peak 34(14q24.2) 0 (0%) 384 0.80597 1 0.39731 1 0.39535 1 0.60491 1 0.11208 1 0.48388 1 Del Peak 35(14q31.3) 0 (0%) 397 0.97747 1 0.66342 1 0.62838 1 0.64688 1 0.053161 1 0.6087 1 Del Peak 36(15q14) 0 (0%) 405 0.44675 1 0.068103 1 0.69505 1 0.8084 1 0.76961 1 0.21134 1 Del Peak 37(16p12.2) 0 (0%) 463 0.35871 1 0.33949 1 0.23829 1 0.80795 1 0.28695 1 0.53421 1 Del Peak 38(16q23.3) 0 (0%) 459 0.24292 1 0.90964 1 0.4857 1 0.26569 1 0.56886 1 0.014066 1 Del Peak 39(17p13.2) 0 (0%) 470 0.62605 1 0.50399 1 0.27211 1 0.18894 1 1 1 0.51878 1 Del Peak 40(17p13.1) 0 (0%) 460 0.80708 1 0.16431 1 0.080201 1 0.79726 1 1 1 0.083216 1 Del Peak 41(17q11.2) 0 (0%) 484 0.58508 1 0.51769 1 0.89489 1 0.24547 1 1 1 0.034966 1 Del Peak 42(18q22.3) 0 (0%) 473 0.74425 1 0.6299 1 0.8046 1 0.12773 1 1 1 0.89589 1 Del Peak 43(19q13.41) 0 (0%) 454 0.05803 1 0.41546 1 1 1 0.26366 1 0.44131 1 1 1 Del Peak 44(21q22.3) 0 (0%) 493 0.69945 1 0.057569 1 0.32504 1 0.19765 1 0.88264 1 0.88174 1 Del Peak 45(22q13.32) 0 (0%) 346 0.63372 1 0.30698 1 0.92842 1 0.51821 1 0.79024 1 1 1 Del Peak 46(Xp22.2) 0 (0%) 430 0.25191 1 0.42926 1 0.67576 1 0.82496 1 0.30784 1 0.43846 1