name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme	callscheme_name	N_tot	nsil_tot	nnon_tot	rate_sil	rate_non
TCGA-A4-7286-01A-11D-2136-08	47	43	4	32	8.510638e-02	1	exome+100bp flanks	34834024	11	32	3.157832e-07	9.186421e-07
TCGA-A4-7287-01A-11D-2136-08	49	48	1	38	2.040816e-02	1	exome+100bp flanks	34834024	10	38	2.870756e-07	1.090887e-06
TCGA-A4-7288-01A-11D-2136-08	82	81	1	65	1.219512e-02	0	coding only	34834024	16	65	4.593210e-07	1.865992e-06
TCGA-A4-7583-01A-11D-2136-08	69	66	3	54	4.347826e-02	1	exome+100bp flanks	34834024	12	53	3.444908e-07	1.521501e-06
TCGA-A4-7584-01A-11D-2136-08	81	78	3	63	3.703704e-02	1	exome+100bp flanks	34834024	15	62	4.306135e-07	1.779869e-06
TCGA-A4-7585-01A-11D-2136-08	99	97	2	82	2.020202e-02	0	coding only	34834024	14	81	4.019059e-07	2.325313e-06
TCGA-A4-7732-01A-11D-2136-08	70	68	2	60	2.857143e-02	0	coding only	34834024	8	57	2.296605e-07	1.636331e-06
TCGA-A4-7734-01A-11D-2136-08	61	59	2	49	3.278689e-02	1	exome+100bp flanks	34834024	10	49	2.870756e-07	1.406671e-06
TCGA-A4-7828-01A-11D-2136-08	41	39	2	33	4.878049e-02	1	exome+100bp flanks	34834024	6	33	1.722454e-07	9.473496e-07
TCGA-A4-7915-01A-11D-2201-08	35	34	1	28	2.857143e-02	1	exome+100bp flanks	34834024	6	28	1.722454e-07	8.038118e-07
TCGA-A4-7996-01A-11D-2201-08	97	96	1	73	1.030928e-02	0	coding only	34834024	23	73	6.602740e-07	2.095652e-06
TCGA-A4-7997-01A-11D-2201-08	83	81	2	60	2.409639e-02	0	coding only	34834024	21	60	6.028589e-07	1.722454e-06
TCGA-A4-8098-01A-11D-2396-08	114	107	7	84	6.140351e-02	1	exome+100bp flanks	34834024	22	80	6.315664e-07	2.296605e-06
TCGA-A4-8310-01A-11D-2396-08	85	84	1	63	1.176471e-02	0	coding only	34834024	20	60	5.741513e-07	1.722454e-06
TCGA-A4-8311-01A-11D-2396-08	67	64	3	43	4.477612e-02	1	exome+100bp flanks	34834024	21	43	6.028589e-07	1.234425e-06
TCGA-A4-8312-01A-11D-2396-08	18	18	0	13	0	1	exome+100bp flanks	34834024	5	12	1.435378e-07	3.444908e-07
TCGA-A4-8516-01A-11D-2396-08	121	118	3	91	2.479339e-02	0	coding only	34834024	27	90	7.751042e-07	2.583681e-06
TCGA-A4-8630-01A-11D-2396-08	63	60	3	48	4.761905e-02	1	exome+100bp flanks	34834024	12	47	3.444908e-07	1.349256e-06
TCGA-AL-3466-01A-01D-1252-08	63	60	3	47	4.761905e-02	1	exome+100bp flanks	34834024	13	45	3.731983e-07	1.291840e-06
TCGA-AL-3467-01A-01D-1252-08	33	33	0	26	0	1	exome+100bp flanks	34834024	7	25	2.009530e-07	7.176891e-07
TCGA-AL-3468-01A-01D-1252-08	126	118	8	91	6.349206e-02	1	exome+100bp flanks	34834024	26	89	7.463967e-07	2.554973e-06
TCGA-AL-3472-01A-01D-1252-08	66	65	1	53	1.515152e-02	0	coding only	34834024	12	50	3.444908e-07	1.435378e-06
TCGA-AL-3473-01A-01D-1252-08	84	78	6	66	7.142857e-02	1	exome+100bp flanks	34834024	12	64	3.444908e-07	1.837284e-06
TCGA-AL-7173-01A-11D-2136-08	70	69	1	57	1.428571e-02	0	coding only	34834024	12	55	3.444908e-07	1.578916e-06
TCGA-B1-5398-01A-02D-1589-08	130	128	2	92	1.538462e-02	0	coding only	34834024	35	92	1.004765e-06	2.641096e-06
TCGA-B3-3925-01A-01D-1252-08	100	96	4	72	4.000000e-02	1	exome+100bp flanks	34834024	24	70	6.889816e-07	2.009530e-06
TCGA-B3-3925-01A-01D-1458-08	90	84	6	63	6.666667e-02	1	exome+100bp flanks	34834024	20	61	5.741513e-07	1.751161e-06
TCGA-B3-3926-01A-01D-1252-08	29	28	1	23	3.448276e-02	1	exome+100bp flanks	34834024	4	23	1.148303e-07	6.602740e-07
TCGA-B3-4103-01A-01D-1252-08	86	82	4	65	4.651163e-02	1	exome+100bp flanks	34834024	16	65	4.593210e-07	1.865992e-06
TCGA-B3-4103-01A-01D-1458-08	81	76	5	59	6.172840e-02	1	exome+100bp flanks	34834024	17	59	4.880286e-07	1.693746e-06
TCGA-B3-4104-01A-01D-1252-08	133	126	7	96	5.263158e-02	1	exome+100bp flanks	34834024	30	96	8.612269e-07	2.755926e-06
TCGA-B3-4104-01A-01D-1458-08	135	129	6	98	4.444444e-02	1	exome+100bp flanks	34834024	31	97	8.899345e-07	2.784634e-06
TCGA-B3-8121-01A-21D-2396-08	48	43	5	34	1.041667e-01	1	exome+100bp flanks	34834024	9	33	2.583681e-07	9.473496e-07
TCGA-B9-4113-01A-01D-1252-08	88	87	1	67	1.136364e-02	0	coding only	34834024	19	66	5.454437e-07	1.894699e-06
TCGA-B9-4114-01A-01D-1252-08	100	98	2	78	2.000000e-02	0	coding only	34834024	20	78	5.741513e-07	2.239190e-06
TCGA-B9-4115-01A-01D-1252-08	79	78	1	53	1.265823e-02	0	coding only	34834024	25	51	7.176891e-07	1.464086e-06
TCGA-B9-4116-01A-01D-1252-08	109	107	2	84	1.834862e-02	0	coding only	34834024	22	82	6.315664e-07	2.354020e-06
TCGA-B9-4117-01A-01D-1252-08	69	66	3	54	4.347826e-02	1	exome+100bp flanks	34834024	12	52	3.444908e-07	1.492793e-06
TCGA-B9-4617-01A-01D-1252-08	78	73	5	59	6.410256e-02	1	exome+100bp flanks	34834024	13	58	3.731983e-07	1.665039e-06
TCGA-B9-5155-01A-01D-1589-08	139	136	3	104	2.158273e-02	0	coding only	34834024	32	104	9.186421e-07	2.985587e-06
TCGA-B9-5156-01A-01D-1589-08	103	102	1	80	9.708738e-03	0	coding only	34834024	21	79	6.028589e-07	2.267898e-06
TCGA-B9-7268-01A-11D-2136-08	62	59	3	41	4.838710e-02	1	exome+100bp flanks	34834024	18	39	5.167362e-07	1.119595e-06
TCGA-BQ-5875-01A-11D-1589-08	88	83	5	65	5.681818e-02	1	exome+100bp flanks	34834024	18	64	5.167362e-07	1.837284e-06
TCGA-BQ-5876-01A-11D-1589-08	96	93	3	76	3.125000e-02	1	exome+100bp flanks	34834024	17	75	4.880286e-07	2.153067e-06
TCGA-BQ-5877-01A-11D-1589-08	90	86	4	73	4.444444e-02	1	exome+100bp flanks	34834024	13	73	3.731983e-07	2.095652e-06
TCGA-BQ-5878-01A-11D-1589-08	127	124	3	88	2.362205e-02	0	coding only	34834024	35	85	1.004765e-06	2.440143e-06
TCGA-BQ-5879-01A-11D-1589-08	34	33	1	23	2.941176e-02	1	exome+100bp flanks	34834024	9	23	2.583681e-07	6.602740e-07
TCGA-BQ-5880-01A-11D-1589-08	68	66	2	53	2.941176e-02	0	coding only	34834024	13	50	3.731983e-07	1.435378e-06
TCGA-BQ-5881-01A-11D-1589-08	48	46	2	38	4.166667e-02	1	exome+100bp flanks	34834024	8	38	2.296605e-07	1.090887e-06
TCGA-BQ-5882-01A-11D-1589-08	79	78	1	59	1.265823e-02	0	coding only	34834024	19	58	5.454437e-07	1.665039e-06
TCGA-BQ-5883-01A-11D-1589-08	46	39	7	31	1.521739e-01	1	exome+100bp flanks	34834024	7	29	2.009530e-07	8.325194e-07
TCGA-BQ-5884-01A-11D-1589-08	63	62	1	49	1.587302e-02	0	coding only	34834024	12	47	3.444908e-07	1.349256e-06
TCGA-BQ-5885-01A-11D-1589-08	123	122	1	99	8.130081e-03	0	coding only	34834024	23	98	6.602740e-07	2.813341e-06
TCGA-BQ-5886-01A-11D-1589-08	68	67	1	58	1.470588e-02	0	coding only	34834024	9	58	2.583681e-07	1.665039e-06
TCGA-BQ-5887-01A-11D-1961-08	29	28	1	22	3.448276e-02	1	exome+100bp flanks	34834024	6	18	1.722454e-07	5.167362e-07
TCGA-BQ-5888-01A-11D-1589-08	31	27	4	18	1.290323e-01	1	exome+100bp flanks	34834024	8	18	2.296605e-07	5.167362e-07
TCGA-BQ-5889-01A-11D-1589-08	69	65	4	52	5.797101e-02	1	exome+100bp flanks	34834024	13	52	3.731983e-07	1.492793e-06
TCGA-BQ-5890-01A-11D-1589-08	97	94	3	75	3.092784e-02	1	exome+100bp flanks	34834024	18	74	5.167362e-07	2.124360e-06
TCGA-BQ-5891-01A-11D-1589-08	39	38	1	24	2.564103e-02	1	exome+100bp flanks	34834024	14	23	4.019059e-07	6.602740e-07
TCGA-BQ-5892-01A-11D-1589-08	86	84	2	71	2.325581e-02	0	coding only	34834024	13	70	3.731983e-07	2.009530e-06
TCGA-BQ-5893-01A-11D-1589-08	63	60	3	42	4.761905e-02	1	exome+100bp flanks	34834024	18	41	5.167362e-07	1.177010e-06
TCGA-BQ-5894-01A-11D-1589-08	38	37	1	32	2.631579e-02	1	exome+100bp flanks	34834024	5	31	1.435378e-07	8.899345e-07
TCGA-BQ-7044-01A-11D-1961-08	89	87	2	68	2.247191e-02	0	coding only	34834024	18	68	5.167362e-07	1.952114e-06
TCGA-BQ-7045-01A-31D-1961-08	94	90	4	65	4.255319e-02	1	exome+100bp flanks	34834024	23	65	6.602740e-07	1.865992e-06
TCGA-BQ-7046-01A-11D-1961-08	51	49	2	39	3.921569e-02	1	exome+100bp flanks	34834024	10	38	2.870756e-07	1.090887e-06
TCGA-BQ-7048-01A-11D-1961-08	91	89	2	70	2.197802e-02	0	coding only	34834024	19	69	5.454437e-07	1.980822e-06
TCGA-BQ-7049-01A-11D-1961-08	33	31	2	24	6.060606e-02	1	exome+100bp flanks	34834024	7	24	2.009530e-07	6.889816e-07
TCGA-BQ-7050-01A-11D-1961-08	27	25	2	21	7.407407e-02	1	exome+100bp flanks	34834024	4	21	1.148303e-07	6.028589e-07
TCGA-BQ-7051-01A-12D-1961-08	111	109	2	79	1.801802e-02	0	coding only	34834024	30	77	8.612269e-07	2.210482e-06
TCGA-BQ-7053-01A-11D-1961-08	67	65	2	52	2.985075e-02	0	coding only	34834024	13	49	3.731983e-07	1.406671e-06
TCGA-BQ-7055-01A-11D-1961-08	16	12	4	8	2.500000e-01	1	exome+100bp flanks	34834024	3	8	8.612269e-08	2.296605e-07
TCGA-BQ-7056-01A-11D-1961-08	45	43	2	33	4.444444e-02	1	exome+100bp flanks	34834024	10	33	2.870756e-07	9.473496e-07
TCGA-BQ-7058-01A-11D-1961-08	86	86	0	72	0	0	coding only	34834024	14	68	4.019059e-07	1.952114e-06
TCGA-BQ-7059-01A-11D-1961-08	82	80	2	59	2.439024e-02	0	coding only	34834024	21	59	6.028589e-07	1.693746e-06
TCGA-BQ-7060-01A-11D-1961-08	44	43	1	34	2.272727e-02	1	exome+100bp flanks	34834024	9	32	2.583681e-07	9.186421e-07
TCGA-BQ-7061-01A-11D-1961-08	90	88	2	72	2.222222e-02	0	coding only	34834024	16	72	4.593210e-07	2.066945e-06
TCGA-BQ-7062-01A-11D-1961-08	48	46	2	38	4.166667e-02	1	exome+100bp flanks	34834024	7	35	2.009530e-07	1.004765e-06
TCGA-DW-5560-01A-01D-1589-08	40	37	3	28	7.500000e-02	1	exome+100bp flanks	34834024	9	26	2.583681e-07	7.463967e-07
TCGA-DW-5561-01A-01D-1589-08	52	52	0	39	0	0	coding only	34834024	12	37	3.444908e-07	1.062180e-06
TCGA-DW-7834-01A-11D-2136-08	71	70	1	51	1.408451e-02	0	coding only	34834024	19	51	5.454437e-07	1.464086e-06
TCGA-DW-7837-01A-11D-2136-08	34	34	0	26	0	1	exome+100bp flanks	34834024	8	26	2.296605e-07	7.463967e-07
TCGA-DW-7838-01A-11D-2136-08	100	100	0	75	0	0	coding only	34834024	24	74	6.889816e-07	2.124360e-06
TCGA-DW-7839-01A-11D-2136-08	52	52	0	47	0	0	coding only	34834024	4	46	1.148303e-07	1.320548e-06
TCGA-DW-7840-01A-11D-2136-08	102	98	4	78	3.921569e-02	1	exome+100bp flanks	34834024	20	77	5.741513e-07	2.210482e-06
TCGA-DW-7841-01A-11D-2136-08	62	59	3	46	4.838710e-02	1	exome+100bp flanks	34834024	12	45	3.444908e-07	1.291840e-06
TCGA-DW-7842-01A-11D-2136-08	30	29	1	25	3.333333e-02	1	exome+100bp flanks	34834024	4	25	1.148303e-07	7.176891e-07
TCGA-DZ-6131-01A-11D-1961-08	36	35	1	24	2.777778e-02	1	exome+100bp flanks	34834024	11	24	3.157832e-07	6.889816e-07
TCGA-DZ-6132-01A-11D-1961-08	135	134	1	116	7.407407e-03	0	coding only	34834024	18	115	5.167362e-07	3.301370e-06
TCGA-DZ-6133-01A-11D-1961-08	132	129	3	103	2.272727e-02	0	coding only	34834024	26	102	7.463967e-07	2.928172e-06
TCGA-DZ-6134-01A-11D-1961-08	60	59	1	42	1.666667e-02	0	coding only	34834024	16	39	4.593210e-07	1.119595e-06
TCGA-DZ-6135-01A-11D-1961-08	41	38	3	25	7.317073e-02	1	exome+100bp flanks	34834024	13	25	3.731983e-07	7.176891e-07
TCGA-EV-5901-01A-11D-1589-08	46	45	1	36	2.173913e-02	1	exome+100bp flanks	34834024	9	36	2.583681e-07	1.033472e-06
TCGA-EV-5902-01A-11D-1589-08	100	99	1	81	1.000000e-02	0	coding only	34834024	17	79	4.880286e-07	2.267898e-06
TCGA-EV-5903-01A-11D-1589-08	126	125	1	100	7.936508e-03	0	coding only	34834024	25	99	7.176891e-07	2.842049e-06
TCGA-G7-6789-01A-11D-1961-08	30	29	1	21	3.333333e-02	1	exome+100bp flanks	34834024	8	21	2.296605e-07	6.028589e-07
TCGA-G7-6790-01A-11D-1961-08	77	77	0	60	0	0	coding only	34834024	16	59	4.593210e-07	1.693746e-06
TCGA-G7-6792-01A-21D-1961-08	43	42	1	29	2.325581e-02	1	exome+100bp flanks	34834024	13	29	3.731983e-07	8.325194e-07
TCGA-G7-6793-01A-11D-1961-08	45	44	1	36	2.222222e-02	1	exome+100bp flanks	34834024	8	35	2.296605e-07	1.004765e-06
TCGA-G7-6795-01A-11D-1961-08	84	82	2	63	2.380952e-02	0	coding only	34834024	19	63	5.454437e-07	1.808577e-06
TCGA-G7-6796-01A-11D-1961-08	65	63	2	49	3.076923e-02	1	exome+100bp flanks	34834024	14	49	4.019059e-07	1.406671e-06
TCGA-G7-6797-01A-11D-1961-08	104	101	3	86	2.884615e-02	0	coding only	34834024	15	86	4.306135e-07	2.468851e-06
TCGA-G7-7501-01A-11D-2201-08	46	45	1	33	2.173913e-02	1	exome+100bp flanks	34834024	10	33	2.870756e-07	9.473496e-07
TCGA-G7-7502-01A-11D-2201-08	80	77	3	60	3.750000e-02	1	exome+100bp flanks	34834024	17	59	4.880286e-07	1.693746e-06
TCGA-GL-6846-01A-11D-1961-08	80	78	2	59	2.500000e-02	0	coding only	34834024	18	59	5.167362e-07	1.693746e-06
TCGA-GL-7773-01A-11D-2136-08	133	131	2	101	1.503759e-02	0	coding only	34834024	30	99	8.612269e-07	2.842049e-06
TCGA-GL-7966-01A-11D-2201-08	50	48	2	33	4.000000e-02	1	exome+100bp flanks	34834024	15	33	4.306135e-07	9.473496e-07
TCGA-GL-8500-01A-11D-2396-08	94	93	1	74	1.063830e-02	0	coding only	34834024	18	72	5.167362e-07	2.066945e-06
TCGA-HE-7128-01A-11D-1961-08	51	51	0	44	0	0	coding only	34834024	7	44	2.009530e-07	1.263133e-06
TCGA-HE-7129-01A-11D-1961-08	82	79	3	60	3.658537e-02	1	exome+100bp flanks	34834024	19	60	5.454437e-07	1.722454e-06
TCGA-HE-7130-01A-11D-1961-08	220	217	3	173	1.363636e-02	0	coding only	34834024	44	170	1.263133e-06	4.880286e-06
TCGA-IZ-8195-01A-31D-2396-08	88	83	5	61	5.681818e-02	1	exome+100bp flanks	34834024	22	59	6.315664e-07	1.693746e-06
TCGA-IZ-8196-01A-11D-2396-08	110	106	4	83	3.636364e-02	1	exome+100bp flanks	34834024	22	82	6.315664e-07	2.354020e-06
TCGA-J7-6720-01A-11D-2136-08	47	43	4	34	8.510638e-02	1	exome+100bp flanks	34834024	9	31	2.583681e-07	8.899345e-07
TCGA-J7-8537-01A-11D-2396-08	53	51	2	42	3.773585e-02	1	exome+100bp flanks	34834024	8	42	2.296605e-07	1.205718e-06