Clinical Features MRNA_CNMF MRNA_CHIERARCHICAL CN_CNMF METHLYATION_CNMF MRNASEQ_CNMF MRNASEQ_CHIERARCHICAL MIRSEQ_CNMF MIRSEQ_CHIERARCHICAL MIRSEQ_MATURE_CNMF MIRSEQ_MATURE_CHIERARCHICAL nMutated (%) nWild-Type Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q IDH1 165 (76%) 52 0.22462 1 0.47778 1 1.0191e-12 3.04e-10 4.5998e-32 1.42e-29 1.7958e-19 5.48e-17 0.059545 1 0.068422 1 0.10647 1 0.0025392 0.678 0.0036129 0.943 IDH2 9 (4%) 208 NA NA NA NA 0.10343 1 0.08487 1 0.050122 1 0.0015792 0.426 0.020678 1 0.509 1 0.48792 1 0.4875 1 IL32 6 (3%) 211 NA NA NA NA 0.060868 1 0.037639 1 0.32993 1 0.3037 1 0.35665 1 0.2804 1 0.52745 1 0.52238 1 TP53 113 (52%) 104 0.1134 1 0.01327 1 2.7755e-23 8.52e-21 1.5209e-42 4.71e-40 9.5906e-16 2.9e-13 5.0119e-12 1.49e-09 0.00089136 0.243 0.018145 1 0.034731 1 0.00032626 0.0904 PIK3R1 14 (6%) 203 0.61538 1 0.85641 1 0.0052621 1 0.048821 1 0.50002 1 0.45078 1 0.87498 1 1 1 0.071706 1 1 1 PIK3CA 19 (9%) 198 NA NA NA NA 0.00050947 0.14 0.00033327 0.092 0.064206 1 0.34459 1 0.39979 1 0.24587 1 0.49563 1 0.58515 1 ATRX 93 (43%) 124 0.02561 1 0.067096 1 3.04e-15 9.15e-13 5.9924e-29 1.85e-26 1.1663e-16 3.53e-14 1.1486e-08 3.35e-06 0.001909 0.514 0.048488 1 0.035204 1 0.0067263 1 FUBP1 22 (10%) 195 0.023134 1 0.0058689 1 1.0571e-09 3.11e-07 3.4138e-08 9.9e-06 1.9759e-08 5.75e-06 2.005e-07 5.79e-05 0.019396 1 0.22176 1 0.1457 1 0.22194 1 CIC 41 (19%) 176 0.05016 1 0.0035066 0.919 6.2167e-19 1.89e-16 1.8703e-22 5.72e-20 4.9828e-13 1.49e-10 5.575e-15 1.67e-12 1.4292e-06 0.00041 0.0046819 1 0.002615 0.693 0.0025505 0.678 NOTCH1 19 (9%) 198 0.61538 1 0.23658 1 1.014e-05 0.00287 2.2853e-06 0.000654 0.00014344 0.0403 2.6532e-05 0.00748 0.003226 0.848 0.00094102 0.256 0.067404 1 0.00014795 0.0414 PTEN 12 (6%) 205 NA NA NA NA 6.1925e-09 1.81e-06 2.0117e-10 5.93e-08 2.4282e-11 7.19e-09 0.0019407 0.52 0.00029369 0.0816 0.017377 1 0.00023413 0.0653 0.0042799 1 NF1 16 (7%) 201 NA NA NA NA 0.045095 1 2.3994e-06 0.000684 0.0010081 0.273 0.77428 1 0.42614 1 0.55086 1 0.12847 1 0.18672 1 ZNF844 6 (3%) 211 NA NA NA NA 1 1 0.5998 1 0.4418 1 0.62842 1 0.18455 1 1 1 0.18843 1 0.74563 1 TCF12 9 (4%) 208 NA NA NA NA 0.90747 1 0.72499 1 0.5707 1 0.1925 1 0.39006 1 0.81241 1 0.32831 1 0.4875 1 ZBTB20 10 (5%) 207 NA NA NA NA 0.41514 1 0.36839 1 0.56172 1 0.9081 1 0.91137 1 0.45006 1 0.41675 1 1 1 TIMD4 6 (3%) 211 NA NA NA NA 0.57669 1 1 1 0.71133 1 0.85794 1 0.5538 1 0.75358 1 0.28319 1 0.26008 1 CREBZF 4 (2%) 213 NA NA NA NA 0.16062 1 0.059976 1 0.35603 1 0.058132 1 0.34334 1 0.076852 1 0.1393 1 0.072843 1 ZNF57 6 (3%) 211 NA NA NA NA 0.13114 1 0.1829 1 0.097553 1 0.085037 1 0.027388 1 0.3818 1 0.47821 1 0.36254 1 ARID1A 13 (6%) 204 NA NA NA NA 0.86619 1 0.5084 1 0.38103 1 0.27746 1 0.33919 1 0.74465 1 0.35627 1 0.72903 1 EGFR 10 (5%) 207 NA NA NA NA 7.4266e-06 0.00211 2.9247e-07 8.42e-05 0.00050105 0.138 0.44975 1 0.16237 1 0.83507 1 0.56749 1 0.82601 1 EMG1 4 (2%) 213 NA NA NA NA 0.68252 1 0.8023 1 0.97047 1 0.64229 1 0.22589 1 0.67966 1 0.068523 1 0.67284 1 PRAMEF11 6 (3%) 211 NA NA NA NA 1 1 0.41308 1 0.21293 1 0.24171 1 0.22237 1 0.026904 1 0.50252 1 0.023041 1 PRDM9 6 (3%) 211 NA NA NA NA 0.65881 1 0.1829 1 0.30476 1 0.85794 1 0.43748 1 1 1 0.64966 1 1 1 NOX4 5 (2%) 212 NA NA NA NA 0.10165 1 0.85753 1 0.59444 1 0.23846 1 0.8652 1 0.32268 1 0.69649 1 0.30746 1 ANKRD30A 8 (4%) 209 NA NA NA NA 0.5288 1 0.20659 1 0.84091 1 1 1 0.50329 1 0.30241 1 0.8358 1 0.2279 1 MUC7 5 (2%) 212 NA NA NA NA 0.23984 1 0.2203 1 0.40061 1 0.5696 1 0.80528 1 0.72046 1 0.41214 1 1 1 PAX4 5 (2%) 212 NA NA NA NA 0.45264 1 0.85753 1 0.75684 1 0.70521 1 0.4728 1 0.72046 1 0.44822 1 0.71451 1 ZNF845 6 (3%) 211 NA NA NA NA 0.27827 1 0.77289 1 0.71133 1 0.62842 1 0.83942 1 0.53498 1 0.93402 1 0.52238 1 C15ORF2 8 (4%) 209 NA NA NA NA 0.23935 1 0.28654 1 0.013224 1 0.31837 1 0.6902 1 0.30241 1 0.60053 1 0.095643 1 SPDYE5 4 (2%) 213 NA NA NA NA 0.052597 1 0.025754 1 0.056488 1 0.28643 1 0.07123 1 0.25014 1 0.26612 1 0.03518 1 SCAF1 4 (2%) 213 NA NA NA NA 1 1 1 1 0.42434 1 0.37331 1 0.085343 1 1 1 0.80677 1 1 1 FSTL5 6 (3%) 211 NA NA NA NA 0.060868 1 0.24185 1 0.11781 1 0.025615 1 0.087529 1 0.3818 1 0.42018 1 0.36254 1 C9ORF79 8 (4%) 209 NA NA NA NA 1 1 0.55544 1 0.6574 1 0.77925 1 0.79222 1 0.80113 1 0.7562 1 0.79249 1 ZCCHC12 3 (1%) 214 NA NA NA NA 0.05432 1 0.053083 1 0.54599 1 0.14448 1 0.43372 1 0.19109 1 0.65633 1 0.18079 1 SMARCA4 13 (6%) 204 NA NA NA NA 0.71439 1 0.4646 1 0.50002 1 0.6758 1 0.35005 1 0.41182 1 0.055522 1 0.18789 1 MYH4 5 (2%) 212 NA NA NA NA 0.45264 1 0.85753 1 0.41843 1 0.10726 1 0.0084558 1 0.72046 1 0.0030708 0.811 0.71451 1 TRDN 4 (2%) 213 NA NA NA NA 0.44753 1 1 1 0.97047 1 0.64229 1 1 1 0.42747 1 0.43378 1 0.418 1