Clinical Features Time to Death AGE GENDER KARNOFSKY.PERFORMANCE.SCORE HISTOLOGICAL.TYPE RADIATIONS.RADIATION.REGIMENINDICATION NUMBERPACKYEARSSMOKED YEAROFTOBACCOSMOKINGONSET DISTANT.METASTASIS LYMPH.NODE.METASTASIS COMPLETENESS.OF.RESECTION TUMOR.STAGECODE NEOPLASM.DISEASESTAGE nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q t-test_P t-test_Q Chi-square test_P Chi-square test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q Chi-square test_P Chi-square test_Q 1p gain 0 (0%) 340 0.86051 1 0.00092766 0.84 1 1 0.47533 1 0.92642 1 0.71261 1 0.91797 1 0.82421 1 0.84515 1 0.019609 1 0.35965 1 NA NA 0.069412 1 1q gain 0 (0%) 237 0.62776 1 0.2612 1 0.53157 1 0.55691 1 0.39888 1 0.45888 1 0.5207 1 0.64802 1 0.39224 1 0.055184 1 0.15717 1 NA NA 0.1506 1 2p gain 0 (0%) 344 0.18069 1 0.040835 1 0.11094 1 0.55773 1 0.77679 1 0.45011 1 0.64563 1 0.75491 1 0.19412 1 0.86988 1 0.37804 1 NA NA 0.057095 1 2q gain 0 (0%) 351 0.35514 1 0.14451 1 0.39531 1 NA NA 0.83562 1 0.69193 1 0.70667 1 0.96108 1 0.16047 1 0.90706 1 1 1 NA NA 0.089269 1 3p gain 0 (0%) 379 0.085808 1 0.62108 1 1 1 NA NA 0.9664 1 0.3809 1 0.86545 1 0.25231 1 0.90966 1 0.51649 1 0.37266 1 NA NA 0.53226 1 3q gain 0 (0%) 366 0.32117 1 0.94254 1 0.52748 1 NA NA 0.99867 1 0.28848 1 0.6015 1 0.36548 1 0.96454 1 0.62867 1 0.65108 1 NA NA 0.17461 1 4p gain 0 (0%) 363 0.34162 1 0.014907 1 0.4207 1 NA NA 0.69144 1 0.34212 1 0.067096 1 0.96804 1 0.054183 1 0.93827 1 0.64173 1 NA NA 0.00033788 0.307 4q gain 0 (0%) 382 0.67322 1 0.85845 1 0.25415 1 NA NA 0.99655 1 0.28415 1 0.057128 1 0.023459 1 0.4249 1 0.65723 1 1 1 NA NA 0.0039911 1 5p gain 0 (0%) 242 0.5579 1 0.063172 1 0.60036 1 0.82987 1 0.14348 1 0.32205 1 0.012918 1 0.66389 1 0.52982 1 0.42284 1 0.25837 1 NA NA 0.55157 1 5q gain 0 (0%) 343 0.9795 1 0.84382 1 0.53347 1 NA NA 0.79366 1 0.24938 1 0.56392 1 0.75207 1 0.56848 1 0.62342 1 0.4729 1 NA NA 0.83161 1 6p gain 0 (0%) 330 0.50806 1 0.9711 1 0.77873 1 0.73778 1 0.2518 1 1 1 0.6974 1 0.30616 1 0.17023 1 0.45 1 0.93648 1 NA NA 0.56784 1 6q gain 0 (0%) 374 0.99195 1 0.26152 1 0.014661 1 NA NA 0.975 1 0.51524 1 0.56577 1 0.41279 1 0.093985 1 0.93399 1 0.61841 1 NA NA 0.071593 1 7p gain 0 (0%) 256 0.15992 1 0.03903 1 0.74779 1 0.22958 1 0.44794 1 0.62173 1 0.4012 1 0.72065 1 0.28173 1 0.028106 1 0.54708 1 NA NA 0.10725 1 7q gain 0 (0%) 295 0.72786 1 0.014342 1 0.47886 1 0.91496 1 0.26153 1 0.39737 1 0.74397 1 0.73838 1 0.066295 1 0.41464 1 0.37283 1 NA NA 0.069866 1 8p gain 0 (0%) 341 0.4989 1 0.0051844 1 0.12486 1 NA NA 0.46817 1 0.47548 1 0.16053 1 0.01742 1 0.88745 1 0.32913 1 1 1 NA NA 0.67658 1 8q gain 0 (0%) 266 0.94509 1 0.0037694 1 0.22945 1 0.30882 1 0.1925 1 0.80143 1 0.68589 1 0.017552 1 0.61455 1 0.151 1 0.76666 1 NA NA 0.80466 1 9p gain 0 (0%) 377 0.23059 1 0.21727 1 0.77739 1 NA NA 0.79827 1 1 1 0.30751 1 0.68775 1 0.023201 1 0.57722 1 0.61841 1 NA NA 0.96496 1 9q gain 0 (0%) 384 0.072537 1 0.16045 1 0.66387 1 NA NA 0.9974 1 1 1 0.31222 1 0.7797 1 6.6917e-05 0.0611 0.71067 1 1 1 NA NA 0.81007 1 10p gain 0 (0%) 345 0.90877 1 0.44549 1 0.03599 1 0.84243 1 0.8231 1 0.24295 1 0.044357 1 0.8734 1 0.8097 1 0.3624 1 0.24206 1 NA NA 0.36563 1 10q gain 0 (0%) 366 0.99937 1 0.78224 1 0.028943 1 NA NA 0.38268 1 0.61393 1 0.17088 1 0.87874 1 0.61161 1 0.36036 1 0.11792 1 NA NA 0.49028 1 11p gain 0 (0%) 358 0.44522 1 0.058916 1 0.5742 1 0.50268 1 0.72474 1 0.64567 1 0.42723 1 0.87173 1 0.53271 1 0.51767 1 0.50161 1 NA NA 0.79307 1 11q gain 0 (0%) 346 0.37074 1 0.00016865 0.154 0.19434 1 0.58588 1 0.76699 1 0.1251 1 0.25455 1 0.061705 1 0.63239 1 0.44454 1 0.82975 1 NA NA 0.27114 1 12p gain 0 (0%) 340 0.77133 1 0.0084197 1 1 1 NA NA 0.5452 1 0.48439 1 0.59937 1 0.11086 1 0.8447 1 0.24067 1 0.77627 1 NA NA 0.0058015 1 12q gain 0 (0%) 349 0.92514 1 0.058194 1 1 1 NA NA 0.45973 1 0.41415 1 0.028855 1 0.04637 1 0.8545 1 0.32595 1 0.57834 1 NA NA 0.16141 1 13q gain 0 (0%) 374 0.88296 1 0.57548 1 1 1 NA NA 0.96962 1 0.14861 1 0.93628 1 0.80551 1 0.22967 1 0.73055 1 1 1 NA NA 0.29662 1 14q gain 0 (0%) 348 0.40378 1 0.42375 1 0.40939 1 0.63743 1 0.42605 1 0.23744 1 0.57928 1 0.50647 1 0.72802 1 0.17192 1 0.72943 1 NA NA 0.51978 1 15q gain 0 (0%) 379 0.26742 1 0.4107 1 0.75971 1 NA NA 0.12737 1 0.3809 1 0.878 1 0.86935 1 0.73898 1 0.64104 1 0.57456 1 NA NA 0.67511 1 16p gain 0 (0%) 337 0.55228 1 0.12648 1 1 1 0.35595 1 0.59923 1 1 1 0.63896 1 0.81401 1 0.71058 1 0.87165 1 0.25829 1 NA NA 0.53352 1 16q gain 0 (0%) 355 0.79795 1 0.040499 1 0.47158 1 0.31941 1 0.23069 1 0.38652 1 0.096561 1 0.64353 1 0.30386 1 0.42526 1 1 1 NA NA 0.026939 1 17p gain 0 (0%) 365 0.47583 1 0.56037 1 0.21233 1 0.28361 1 0.075903 1 0.019088 1 0.054198 1 0.89223 1 0.30166 1 0.94865 1 0.4965 1 NA NA 0.039054 1 17q gain 0 (0%) 322 0.27348 1 0.57916 1 1 1 0.34446 1 0.26076 1 0.10044 1 0.081242 1 0.71344 1 0.098686 1 0.86964 1 0.0087846 1 NA NA 0.22869 1 18p gain 0 (0%) 349 0.80998 1 0.068875 1 0.24274 1 0.61317 1 0.072194 1 0.70641 1 0.10304 1 0.62719 1 0.71174 1 0.73091 1 0.74113 1 NA NA 0.058315 1 18q gain 0 (0%) 365 0.23832 1 0.044128 1 0.40653 1 0.61317 1 0.24258 1 0.30641 1 0.35661 1 0.070932 1 0.94365 1 0.58986 1 0.37688 1 NA NA 0.21546 1 19p gain 0 (0%) 383 0.92561 1 0.049842 1 1 1 NA NA 0.99889 1 1 1 0.45018 1 0.41382 1 0.0001711 0.156 0.049312 1 0.41196 1 NA NA 0.070697 1 19q gain 0 (0%) 369 0.29487 1 0.77676 1 0.49097 1 NA NA 0.4683 1 0.61311 1 0.44513 1 0.21931 1 0.11818 1 0.27822 1 0.72537 1 NA NA 0.12729 1 20p gain 0 (0%) 337 0.93447 1 0.66314 1 0.88157 1 0.54787 1 0.73403 1 0.71971 1 0.88616 1 0.59473 1 0.45901 1 0.59702 1 0.51595 1 NA NA 0.33827 1 20q gain 0 (0%) 323 0.79994 1 0.20039 1 0.34324 1 0.13758 1 0.61689 1 0.74918 1 0.033202 1 0.80573 1 0.64995 1 0.80324 1 0.89826 1 NA NA 0.25145 1 21q gain 0 (0%) 355 0.80222 1 0.84414 1 0.2129 1 NA NA 0.71967 1 1 1 0.93903 1 0.55399 1 0.87367 1 0.19291 1 1 1 NA NA 0.97794 1 22q gain 0 (0%) 374 0.65904 1 0.35364 1 0.79345 1 NA NA 0.25358 1 0.51524 1 0.24814 1 0.48137 1 0.92233 1 0.29044 1 0.75411 1 NA NA 0.26357 1 Xq gain 0 (0%) 373 0.17783 1 0.16659 1 0.44798 1 NA NA 0.67492 1 1 1 0.40557 1 0.16293 1 0.15426 1 0.93432 1 0.65788 1 NA NA 0.012699 1 1p loss 0 (0%) 363 0.20738 1 0.70734 1 0.22636 1 NA NA 0.51354 1 1 1 0.22435 1 0.9585 1 0.41367 1 0.90718 1 0.31495 1 NA NA 0.19611 1 1q loss 0 (0%) 380 0.00037407 0.339 0.74275 1 0.73762 1 NA NA 0.0075364 1 0.35011 1 0.37235 1 0.70571 1 0.95204 1 0.17239 1 1 1 NA NA 0.0043061 1 2p loss 0 (0%) 384 0.21902 1 0.14614 1 1 1 NA NA 0.92183 1 1 1 0.52059 1 NA NA 0.97698 1 0.89703 1 1 1 NA NA 1.5258e-19 1.4e-16 2q loss 0 (0%) 386 NA NA NA NA 1 1 NA NA 0.35696 1 1 1 NA NA NA NA 0.84081 1 0.7917 1 NA NA NA NA 2.2186e-07 0.000203 3p loss 0 (0%) 314 0.15895 1 0.73204 1 0.79685 1 0.014059 1 0.75537 1 1 1 0.1603 1 0.11639 1 0.36915 1 0.53168 1 0.89894 1 NA NA 0.3466 1 3q loss 0 (0%) 344 0.346 1 0.80071 1 1 1 0.017133 1 0.50659 1 0.70704 1 0.036242 1 0.59272 1 0.64214 1 0.47771 1 0.91006 1 NA NA 0.63447 1 4p loss 0 (0%) 354 0.56421 1 0.012005 1 0.48381 1 0.62545 1 0.55952 1 0.21363 1 0.79997 1 0.22708 1 0.94782 1 0.11444 1 0.78128 1 NA NA 0.31692 1 4q loss 0 (0%) 347 0.61614 1 0.047266 1 0.14021 1 0.85128 1 0.91654 1 0.4274 1 0.41429 1 0.98228 1 0.59818 1 0.01292 1 0.62812 1 NA NA 0.020671 1 5p loss 0 (0%) 380 0.6891 1 0.55542 1 0.73762 1 NA NA 0.03996 1 0.35011 1 0.36154 1 0.75018 1 0.89468 1 0.82919 1 0.23974 1 NA NA 0.67414 1 5q loss 0 (0%) 340 0.69413 1 0.022855 1 0.047253 1 0.70535 1 0.032434 1 1 1 0.26378 1 0.42064 1 0.38674 1 0.18233 1 0.1853 1 NA NA 0.629 1 6p loss 0 (0%) 357 0.82904 1 0.047368 1 0.13788 1 0.12001 1 0.75481 1 0.65161 1 0.13934 1 0.26625 1 0.39244 1 0.72902 1 0.35685 1 NA NA 0.6678 1 6q loss 0 (0%) 304 0.88621 1 0.05796 1 0.46204 1 0.028529 1 0.57562 1 0.56005 1 0.062734 1 0.23824 1 0.2857 1 0.73982 1 0.77852 1 NA NA 0.86385 1 7p loss 0 (0%) 378 0.83459 1 0.24915 1 1 1 NA NA 0.46132 1 0.4103 1 0.62529 1 0.39651 1 0.68297 1 0.90625 1 0.32984 1 NA NA 0.95327 1 7q loss 0 (0%) 377 0.77602 1 0.20373 1 0.55822 1 NA NA 0.00017601 0.16 0.43838 1 0.28835 1 0.57649 1 0.81738 1 0.98642 1 0.28548 1 NA NA 0.91411 1 8p loss 0 (0%) 291 0.63264 1 0.91946 1 0.72545 1 0.25384 1 0.15921 1 0.57936 1 0.6037 1 0.89032 1 0.22195 1 0.53013 1 0.66297 1 NA NA 0.88522 1 8q loss 0 (0%) 375 0.60594 1 0.39246 1 0.78985 1 NA NA 0.066747 1 1 1 0.17273 1 NA NA 1.7217e-05 0.0158 0.62009 1 1 1 NA NA 0.85127 1 9p loss 0 (0%) 274 0.0079724 1 0.39466 1 0.074254 1 0.86995 1 0.69807 1 1 1 0.41639 1 0.76392 1 0.50259 1 0.034204 1 0.68846 1 NA NA 0.26179 1 9q loss 0 (0%) 293 0.52011 1 0.6377 1 1 1 0.98976 1 0.64633 1 0.57916 1 0.28392 1 0.89128 1 0.41626 1 0.31751 1 0.2955 1 NA NA 0.61633 1 10p loss 0 (0%) 362 0.25991 1 0.71552 1 0.10835 1 NA NA 0.16725 1 1 1 0.60549 1 0.70781 1 0.88167 1 0.61727 1 0.66267 1 NA NA 0.95553 1 10q loss 0 (0%) 356 0.30235 1 0.20088 1 0.71878 1 NA NA 0.0004047 0.367 1 1 0.060675 1 0.97465 1 0.96798 1 0.25625 1 0.81049 1 NA NA 0.37149 1 11p loss 0 (0%) 360 0.29118 1 0.0072468 1 0.56341 1 NA NA 0.58397 1 1 1 0.062351 1 0.017327 1 0.10785 1 0.41568 1 0.89206 1 NA NA 0.12911 1 11q loss 0 (0%) 364 0.16301 1 0.8835 1 0.30653 1 0.70535 1 0.2419 1 1 1 0.032821 1 0.35383 1 0.035541 1 0.71402 1 0.74809 1 NA NA 0.49979 1 12p loss 0 (0%) 355 0.3845 1 0.55435 1 1 1 0.53292 1 0.72265 1 1 1 0.70514 1 0.067217 1 0.52723 1 0.86512 1 0.77177 1 NA NA 0.54695 1 12q loss 0 (0%) 368 0.056535 1 0.947 1 0.65361 1 NA NA 0.78215 1 0.61248 1 0.97752 1 0.25983 1 0.65121 1 0.70624 1 1 1 NA NA 0.26862 1 13q loss 0 (0%) 302 0.32886 1 0.14872 1 0.54216 1 0.56157 1 0.14712 1 0.77353 1 0.70716 1 0.15477 1 0.62814 1 0.073876 1 0.47098 1 NA NA 0.26085 1 14q loss 0 (0%) 348 0.48419 1 0.47044 1 1 1 0.79797 1 0.41166 1 0.42056 1 0.23266 1 0.32216 1 0.30052 1 0.83509 1 0.48701 1 NA NA 0.61565 1 15q loss 0 (0%) 308 0.73156 1 0.05628 1 0.31917 1 0.77317 1 0.14895 1 1 1 0.16298 1 0.83058 1 0.94885 1 0.84139 1 0.31177 1 NA NA 0.48428 1 16p loss 0 (0%) 358 0.32198 1 0.2187 1 0.18858 1 NA NA 0.36449 1 0.64567 1 0.96101 1 0.65902 1 3.7606e-05 0.0344 0.95261 1 0.34878 1 NA NA 0.0079208 1 16q loss 0 (0%) 337 0.32495 1 0.29924 1 0.55133 1 0.72439 1 0.019453 1 1 1 0.94455 1 0.51933 1 0.013036 1 0.91111 1 0.51524 1 NA NA 0.41613 1 17p loss 0 (0%) 293 0.78075 1 0.24523 1 0.72347 1 0.10668 1 0.65072 1 0.57916 1 0.44857 1 0.058786 1 0.83064 1 0.54034 1 0.18251 1 NA NA 0.72201 1 17q loss 0 (0%) 375 0.025121 1 0.20468 1 0.27517 1 NA NA 0.39526 1 1 1 0.51726 1 0.053937 1 0.97822 1 0.74219 1 0.69341 1 NA NA 0.12451 1 18p loss 0 (0%) 321 0.3711 1 0.087874 1 0.18247 1 0.005334 1 0.25357 1 0.33487 1 0.00013619 0.124 0.028926 1 0.10926 1 0.47078 1 0.22505 1 NA NA 0.25746 1 18q loss 0 (0%) 294 0.016236 1 0.4762 1 0.63583 1 0.48644 1 0.23681 1 0.26216 1 0.21471 1 0.38316 1 0.52123 1 0.5861 1 0.019154 1 NA NA 0.099109 1 19p loss 0 (0%) 288 0.056184 1 0.27979 1 0.081785 1 0.56157 1 0.82916 1 1 1 0.71469 1 0.44366 1 0.032622 1 0.28289 1 0.1353 1 NA NA 0.017171 1 19q loss 0 (0%) 330 0.066864 1 0.49477 1 0.77873 1 0.0055871 1 0.4633 1 0.7435 1 0.45729 1 0.61189 1 0.01662 1 0.86832 1 0.040055 1 NA NA 0.09181 1 20p loss 0 (0%) 336 0.065677 1 0.8955 1 0.88247 1 0.015092 1 0.68395 1 0.48744 1 0.63581 1 0.068597 1 0.37067 1 0.26667 1 1 1 NA NA 0.523 1 20q loss 0 (0%) 368 0.18285 1 0.3455 1 0.8256 1 NA NA 0.42546 1 0.61248 1 0.87097 1 0.25724 1 0.73035 1 0.90882 1 0.52457 1 NA NA 0.57577 1 21q loss 0 (0%) 335 0.99957 1 0.28463 1 0.01819 1 0.12428 1 0.43936 1 1 1 0.29876 1 0.79996 1 0.85823 1 0.71487 1 0.63438 1 NA NA 0.14574 1 22q loss 0 (0%) 310 0.54427 1 0.026283 1 0.057524 1 0.65676 1 0.78141 1 0.3812 1 0.18374 1 0.036238 1 0.039539 1 0.87872 1 0.21001 1 NA NA 0.64646 1 Xq loss 0 (0%) 379 0.2751 1 0.065225 1 0.048551 1 NA NA 0.015699 1 0.073053 1 0.30393 1 0.90913 1 0.91893 1 0.39679 1 1 1 NA NA 0.0011424 1