Clinical Features Time to Death AGE PRIMARY.SITE.OF.DISEASE KARNOFSKY.PERFORMANCE.SCORE TUMOR.STAGE RADIATIONS.RADIATION.REGIMENINDICATION COMPLETENESS.OF.RESECTION nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q 1p gain 0 (0%) 458 0.092314 1 0.83499 1 0.15463 1 0.12641 1 0.06483 1 0.089551 1 0.10757 1 1q gain 0 (0%) 402 0.30337 1 0.034317 1 0.067972 1 0.033077 1 0.18593 1 1 1 1 1 2p gain 0 (0%) 434 0.032173 1 2.4481e-07 0.00013 1 1 0.95552 1 0.47351 1 0.54019 1 1 1 2q gain 0 (0%) 460 0.1111 1 0.00051621 0.272 1 1 0.68973 1 0.45303 1 0.086357 1 1 1 3p gain 0 (0%) 453 0.41039 1 0.034636 1 0.57493 1 0.73023 1 0.25875 1 1 1 0.56675 1 3q gain 0 (0%) 357 0.59369 1 7.8423e-07 0.000417 0.1256 1 0.6712 1 0.8231 1 0.5573 1 0.10972 1 4p gain 0 (0%) 531 0.27908 1 0.57535 1 1 1 0.9211 1 1 1 1 1 NA NA 4q gain 0 (0%) 546 0.23522 1 0.044357 1 1 1 0.9211 1 1 1 1 1 NA NA 5p gain 0 (0%) 418 0.52757 1 0.23813 1 0.12396 1 0.79052 1 0.48045 1 1 1 0.051824 1 5q gain 0 (0%) 529 0.3092 1 0.93498 1 0.20693 1 0.13656 1 0.41672 1 1 1 0.25118 1 6p gain 0 (0%) 442 0.45489 1 0.0062533 1 0.61901 1 0.033715 1 1 1 1 1 0.53013 1 6q gain 0 (0%) 500 0.51038 1 0.051645 1 1 1 0.19537 1 0.46046 1 1 1 0.6748 1 7p gain 0 (0%) 438 0.20487 1 0.001526 0.801 1 1 0.29183 1 0.17234 1 1 1 1 1 7q gain 0 (0%) 412 0.19011 1 0.010694 1 0.71137 1 0.27589 1 0.019765 1 0.56842 1 0.75957 1 8p gain 0 (0%) 476 0.082301 1 0.68481 1 1 1 0.89448 1 0.17881 1 0.393 1 1 1 8q gain 0 (0%) 359 0.19528 1 0.58933 1 0.24939 1 0.88008 1 0.47935 1 1 1 0.1246 1 9p gain 0 (0%) 503 0.74016 1 0.77557 1 1 1 0.95 1 0.76362 1 1 1 0.6748 1 9q gain 0 (0%) 535 0.94745 1 0.65598 1 1 1 NA NA 0.35143 1 1 1 1 1 10p gain 0 (0%) 432 0.21741 1 1.1651e-05 0.00614 0.10731 1 0.18371 1 0.78703 1 1 1 0.5291 1 10q gain 0 (0%) 495 0.45774 1 0.015924 1 0.40495 1 0.40265 1 0.68386 1 1 1 0.57641 1 11p gain 0 (0%) 522 0.57426 1 0.84993 1 1 1 0.85189 1 0.41672 1 1 1 NA NA 11q gain 0 (0%) 501 0.29588 1 0.47061 1 1 1 0.56601 1 0.22264 1 1 1 0.41057 1 12p gain 0 (0%) 355 0.28009 1 3.5243e-08 1.88e-05 0.1248 1 0.030182 1 0.75355 1 1 1 0.65767 1 12q gain 0 (0%) 440 0.10942 1 1.4877e-06 0.000788 0.61547 1 0.031174 1 1 1 0.52081 1 0.6204 1 13q gain 0 (0%) 521 0.70788 1 0.026376 1 1 1 0.47649 1 0.1244 1 0.20362 1 1 1 14q gain 0 (0%) 529 0.31066 1 0.78803 1 1 1 0.49661 1 0.53187 1 0.16629 1 0.41057 1 15q gain 0 (0%) 537 0.85637 1 0.35338 1 1 1 NA NA NA NA 1 1 NA NA 16p gain 0 (0%) 531 0.61218 1 0.46939 1 1 1 0.23207 1 0.282 1 1 1 0.277 1 16q gain 0 (0%) 546 0.66585 1 0.75053 1 1 1 NA NA NA NA 1 1 0.37718 1 17p gain 0 (0%) 551 0.16035 1 0.079419 1 1 1 0.76749 1 NA NA 1 1 NA NA 17q gain 0 (0%) 539 0.16948 1 0.17877 1 1 1 0.61433 1 1 1 1 1 NA NA 18p gain 0 (0%) 488 0.14903 1 0.16453 1 1 1 0.34056 1 0.54441 1 1 1 0.77812 1 18q gain 0 (0%) 521 0.34203 1 0.33984 1 1 1 0.25158 1 0.38546 1 0.20362 1 1 1 19p gain 0 (0%) 464 0.33258 1 0.014538 1 1 1 0.99553 1 0.21709 1 0.43785 1 0.74066 1 19q gain 0 (0%) 471 0.14748 1 0.014573 1 1 1 0.64903 1 0.33854 1 0.41196 1 0.47582 1 20p gain 0 (0%) 329 0.12474 1 2.9228e-06 0.00155 1 1 0.10467 1 0.56582 1 0.57277 1 1 1 20q gain 0 (0%) 290 0.095687 1 1.2689e-06 0.000674 1 1 0.22886 1 0.46604 1 0.61265 1 1 1 21q gain 0 (0%) 492 0.0063078 1 0.0135 1 0.40495 1 0.56601 1 0.24339 1 1 1 0.57641 1 22q gain 0 (0%) 553 0.59904 1 0.29271 1 1 1 NA NA NA NA 1 1 NA NA Xq gain 0 (0%) 528 0.096371 1 0.20347 1 1 1 0.13656 1 0.36201 1 1 1 NA NA 1p loss 0 (0%) 528 0.83964 1 0.41514 1 1 1 0.29569 1 0.5995 1 0.17102 1 NA NA 1q loss 0 (0%) 540 0.33319 1 0.088772 1 1 1 0.21989 1 0.36201 1 0.11309 1 NA NA 2p loss 0 (0%) 536 0.58001 1 0.83906 1 1 1 0.073101 1 1 1 1 1 NA NA 2q loss 0 (0%) 532 0.72014 1 0.45807 1 0.2008 1 0.073101 1 1 1 1 1 NA NA 3p loss 0 (0%) 503 0.31937 1 0.13474 1 0.36458 1 0.32052 1 0.17241 1 0.28349 1 0.064692 1 3q loss 0 (0%) 539 0.13718 1 0.84032 1 0.15694 1 0.60692 1 0.282 1 0.11802 1 NA NA 4p loss 0 (0%) 303 0.27093 1 0.3321 1 0.16643 1 0.10638 1 0.62712 1 0.5973 1 1 1 4q loss 0 (0%) 262 0.36473 1 0.18843 1 0.751 1 0.95178 1 0.56134 1 1 1 0.65184 1 5p loss 0 (0%) 479 0.28586 1 0.029764 1 0.47542 1 0.22689 1 0.28531 1 1 1 NA NA 5q loss 0 (0%) 392 0.48953 1 0.13107 1 0.35263 1 0.41962 1 0.20938 1 1 1 1 1 6p loss 0 (0%) 437 0.096448 1 0.0043306 1 0.63291 1 0.64693 1 0.84928 1 0.53057 1 0.18945 1 6q loss 0 (0%) 368 0.42697 1 0.0063519 1 0.11594 1 0.3094 1 0.43887 1 1 1 1 1 7p loss 0 (0%) 472 0.12119 1 0.98314 1 0.50608 1 0.033577 1 0.36208 1 1 1 0.277 1 7q loss 0 (0%) 514 0.039109 1 0.2468 1 0.30575 1 0.0033924 1 0.7685 1 0.23535 1 NA NA 8p loss 0 (0%) 330 0.27829 1 0.03037 1 0.1458 1 0.03879 1 1 1 1 1 0.35449 1 8q loss 0 (0%) 500 0.37976 1 0.025786 1 1 1 0.33113 1 0.81396 1 1 1 0.6748 1 9p loss 0 (0%) 350 0.56794 1 0.034187 1 0.13043 1 0.47871 1 1 1 0.55999 1 0.45565 1 9q loss 0 (0%) 322 0.50728 1 3.7447e-06 0.00198 0.15233 1 0.77928 1 0.7874 1 0.57849 1 0.87227 1 10p loss 0 (0%) 496 0.65923 1 0.17933 1 1 1 0.75299 1 0.24175 1 0.31305 1 0.77812 1 10q loss 0 (0%) 472 0.9878 1 0.33137 1 1 1 0.80937 1 0.34931 1 0.0039923 1 1 1 11p loss 0 (0%) 418 0.65991 1 0.034685 1 1 1 0.74134 1 0.3128 1 1 1 1 1 11q loss 0 (0%) 454 0.85019 1 0.1428 1 0.57493 1 0.17046 1 0.23397 1 0.47349 1 0.72187 1 12p loss 0 (0%) 512 0.81518 1 0.11678 1 1 1 0.11311 1 0.46046 1 1 1 NA NA 12q loss 0 (0%) 488 0.29468 1 0.43439 1 1 1 0.69493 1 0.34803 1 1 1 1 1 13q loss 0 (0%) 305 0.30205 1 0.84936 1 0.45804 1 0.68273 1 0.0074181 1 1 1 1 1 14q loss 0 (0%) 400 0.3836 1 0.12328 1 1 1 0.70599 1 0.069483 1 0.56068 1 0.45693 1 15q loss 0 (0%) 346 0.77001 1 0.049577 1 0.27276 1 0.64955 1 0.11431 1 0.56189 1 1 1 16p loss 0 (0%) 294 0.11748 1 0.97003 1 0.47333 1 0.2593 1 0.56134 1 0.60773 1 0.66214 1 16q loss 0 (0%) 206 0.18031 1 0.0033629 1 0.78219 1 0.053564 1 0.28534 1 1 1 1 1 17p loss 0 (0%) 138 0.97687 1 0.014268 1 0.25522 1 0.88342 1 0.48624 1 0.57132 1 0.47013 1 17q loss 0 (0%) 234 0.44992 1 0.057339 1 1 1 0.054666 1 0.74671 1 0.26968 1 0.58382 1 18p loss 0 (0%) 379 0.43309 1 0.85832 1 0.79483 1 0.75229 1 1 1 0.24863 1 0.87473 1 18q loss 0 (0%) 329 0.4667 1 0.81871 1 0.76471 1 0.65021 1 0.37691 1 0.57277 1 0.8688 1 19p loss 0 (0%) 419 0.90716 1 0.12133 1 0.69081 1 0.48502 1 0.58303 1 1 1 0.13858 1 19q loss 0 (0%) 419 0.73232 1 0.74693 1 0.69081 1 0.40704 1 0.50724 1 0.57444 1 0.19452 1 20p loss 0 (0%) 525 0.029833 1 0.20526 1 1 1 0.0033924 1 0.8193 1 0.1851 1 NA NA 20q loss 0 (0%) 540 0.039853 1 0.789 1 1 1 0.0033924 1 0.74907 1 1 1 NA NA 21q loss 0 (0%) 414 0.75025 1 0.93223 1 1 1 0.50848 1 0.86673 1 1 1 0.42274 1 22q loss 0 (0%) 177 0.23131 1 0.21726 1 0.38158 1 0.95388 1 0.86039 1 0.55537 1 0.1794 1 Xq loss 0 (0%) 462 0.2972 1 0.71995 1 0.54752 1 0.48502 1 0.18539 1 1 1 0.16656 1