Clinical Features	Time to Death		AGE		PRIMARY.SITE.OF.DISEASE		KARNOFSKY.PERFORMANCE.SCORE		TUMOR.STAGE		RADIATIONS.RADIATION.REGIMENINDICATION		COMPLETENESS.OF.RESECTION	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
Amp Peak  1(1p34.3)	0 (0%)	282	0.029071	1	0.0090495	1	1	1	0.98496	1	0.76373	1	0.123	1	0.37857	1
Amp Peak  2(1q21.3)	0 (0%)	209	0.27197	1	3.7414e-06	0.00179	0.12802	1	0.40756	1	0.2104	1	1	1	0.34503	1
Amp Peak  3(1q42.2)	0 (0%)	256	0.26677	1	0.00059142	0.279	0.25227	1	0.7365	1	0.66046	1	0.59403	1	0.83568	1
Amp Peak  4(2p23.2)	0 (0%)	327	0.9542	1	0.082218	1	0.7623	1	0.98836	1	0.50613	1	1	1	0.58539	1
Amp Peak  5(2q31.2)	0 (0%)	314	0.15726	1	0.01423	1	0.75624	1	0.69254	1	0.90683	1	0.085349	1	0.87321	1
Amp Peak  6(3q26.2)	0 (0%)	96	0.91819	1	0.0007876	0.37	0.52714	1	0.001308	0.613	0.34998	1	1	1	0.77812	1
Amp Peak  7(4p16.3)	0 (0%)	407	0.47863	1	0.66985	1	0.72265	1	0.07285	1	0.66813	1	1	1	0.5291	1
Amp Peak  8(4q13.3)	0 (0%)	456	0.21575	1	0.20412	1	0.5711	1	0.41975	1	0.76419	1	1	1	0.41057	1
Amp Peak  9(5p15.33)	0 (0%)	266	0.061527	1	0.0025494	1	0.75078	1	0.79795	1	0.52253	1	0.60533	1	0.039069	1
Amp Peak 10(6p22.3)	0 (0%)	277	0.14822	1	0.0050848	1	1	1	0.5448	1	0.33341	1	0.61904	1	0.44953	1
Amp Peak 11(7q36.3)	0 (0%)	262	0.2645	1	0.84144	1	1	1	0.10005	1	0.69968	1	0.60067	1	0.15245	1
Amp Peak 12(8p11.21)	0 (0%)	360	0.29765	1	0.00050357	0.238	0.12077	1	0.66216	1	0.63337	1	0.29435	1	0.15245	1
Amp Peak 13(8q24.21)	0 (0%)	121	0.62104	1	0.0972	1	1	1	0.62757	1	0.19189	1	0.51753	1	0.39141	1
Amp Peak 14(10p15.3)	0 (0%)	323	0.11415	1	0.00040333	0.191	0.15397	1	0.92261	1	0.25668	1	0.57763	1	0.7214	1
Amp Peak 15(10q22.3)	0 (0%)	388	0.49867	1	0.21572	1	0.093412	1	0.98882	1	0.3587	1	1	1	0.4147	1
Amp Peak 16(11q14.1)	0 (0%)	314	0.331	1	0.32558	1	0.25584	1	0.47437	1	0.64804	1	1	1	1	1
Amp Peak 17(12p13.33)	0 (0%)	247	0.73345	1	3.9651e-07	0.00019	0.75581	1	0.73474	1	0.35587	1	1	1	0.25228	1
Amp Peak 18(12p12.1)	0 (0%)	262	0.082123	1	1.0794e-08	5.2e-06	0.25099	1	0.33477	1	0.24439	1	0.60067	1	1	1
Amp Peak 19(14q11.2)	0 (0%)	420	0.77745	1	0.063266	1	0.12396	1	0.37817	1	0.11216	1	1	1	0.81205	1
Amp Peak 20(14q32.33)	0 (0%)	412	0.20398	1	0.01683	1	0.71137	1	0.11321	1	0.12983	1	0.1752	1	1	1
Amp Peak 21(15q26.3)	0 (0%)	408	0.066641	1	0.29051	1	0.72816	1	0.41962	1	0.47859	1	0.56548	1	1	1
Amp Peak 22(17q25.3)	0 (0%)	358	0.026576	1	0.7698	1	1	1	0.68542	1	0.29258	1	1	1	0.080732	1
Amp Peak 23(18q11.2)	0 (0%)	426	0.99521	1	0.042736	1	0.11384	1	0.17994	1	0.66649	1	0.56521	1	0.83728	1
Amp Peak 24(19p13.12)	0 (0%)	258	0.21921	1	0.068415	1	0.46097	1	0.59701	1	0.74982	1	0.5962	1	0.40428	1
Amp Peak 25(19q12)	0 (0%)	252	0.56692	1	1.0752e-05	0.00512	0.16224	1	0.51038	1	0.8758	1	1	1	1	1
Amp Peak 26(19q13.2)	0 (0%)	327	0.016795	1	3.095e-06	0.00148	0.14987	1	0.98882	1	0.505	1	0.57434	1	0.18881	1
Amp Peak 27(20p13)	0 (0%)	253	0.30048	1	0.0019321	0.904	0.75425	1	0.10999	1	0.87178	1	1	1	0.38091	1
Amp Peak 28(20q11.21)	0 (0%)	234	0.094896	1	6.6569e-08	3.2e-05	1	1	0.26442	1	0.67268	1	1	1	0.61578	1
Amp Peak 29(20q13.33)	0 (0%)	173	0.31297	1	9.7877e-06	0.00467	1	1	0.75229	1	1	1	1	1	0.054753	1
Amp Peak 30(22q12.2)	0 (0%)	474	0.53003	1	0.023446	1	1	1	0.41922	1	0.58336	1	1	1	1	1
Amp Peak 31(Xp11.23)	0 (0%)	399	0.15556	1	0.021456	1	0.078111	1	0.27522	1	0.6089	1	0.56018	1	0.19172	1
Amp Peak 32(Xq28)	0 (0%)	341	0.33164	1	0.95579	1	0.77011	1	0.65424	1	0.08874	1	0.060308	1	0.81774	1
Del Peak  1(1p36.11)	0 (0%)	301	0.15345	1	0.19436	1	0.75078	1	0.42681	1	0.39894	1	1	1	0.81774	1
Del Peak  2(1q32.3)	0 (0%)	470	0.93988	1	0.51212	1	1	1	0.287	1	0.30924	1	0.41571	1	NA	NA
Del Peak  3(2p25.3)	0 (0%)	444	0.8989	1	0.45155	1	0.61547	1	0.87498	1	1	1	0.5076	1	0.02157	1
Del Peak  4(2q22.1)	0 (0%)	431	0.26503	1	0.37828	1	0.65632	1	0.59544	1	1	1	1	1	0.42655	1
Del Peak  5(2q37.3)	0 (0%)	391	0.43384	1	0.099148	1	0.35905	1	0.43156	1	0.81593	1	0.22096	1	0.25325	1
Del Peak  6(3p26.2)	0 (0%)	355	0.85275	1	0.0023283	1	0.12641	1	0.24583	1	0.42914	1	0.049511	1	0.28678	1
Del Peak  7(4q22.1)	0 (0%)	183	0.53819	1	0.93799	1	1	1	0.92539	1	0.091663	1	1	1	0.36255	1
Del Peak  8(4q34.3)	0 (0%)	155	0.82607	1	0.3532	1	0.72816	1	0.1711	1	0.096935	1	0.5648	1	0.3861	1
Del Peak  9(5q11.2)	0 (0%)	227	0.68495	1	0.64139	1	0.76732	1	0.32514	1	0.094326	1	0.56843	1	0.22991	1
Del Peak 10(5q13.2)	0 (0%)	162	0.2244	1	0.93361	1	0.74681	1	0.21637	1	0.67505	1	0.20091	1	0.26541	1
Del Peak 11(6q27)	0 (0%)	187	0.27018	1	0.00066958	0.315	1	1	0.50848	1	0.10701	1	1	1	0.79422	1
Del Peak 12(7p22.1)	0 (0%)	318	0.081246	1	0.027393	1	0.75759	1	0.49672	1	0.81048	1	1	1	0.12259	1
Del Peak 13(8p23.3)	0 (0%)	185	0.29009	1	0.059749	1	1	1	0.95041	1	0.85806	1	1	1	0.85858	1
Del Peak 14(8p21.2)	0 (0%)	170	0.64592	1	0.066692	1	1	1	0.64693	1	0.40313	1	1	1	0.59181	1
Del Peak 15(9p24.3)	0 (0%)	309	0.89156	1	0.023788	1	0.44966	1	0.92791	1	1	1	0.59087	1	0.52953	1
Del Peak 16(9q34.13)	0 (0%)	226	0.74882	1	0.042059	1	0.76732	1	0.62301	1	1	1	0.27745	1	0.1482	1
Del Peak 17(10p15.3)	0 (0%)	444	0.32197	1	0.83872	1	0.60833	1	0.72035	1	0.037392	1	0.5076	1	1	1
Del Peak 18(10q23.31)	0 (0%)	343	0.3067	1	0.99461	1	1	1	0.39299	1	0.26774	1	0.56349	1	0.60145	1
Del Peak 19(10q26.3)	0 (0%)	373	0.076548	1	0.81743	1	0.79979	1	0.77021	1	0.30495	1	1	1	1	1
Del Peak 20(11p15.5)	0 (0%)	230	0.043459	1	0.55038	1	0.026685	1	0.26732	1	0.63755	1	1	1	0.58539	1
Del Peak 21(11q25)	0 (0%)	369	0.54431	1	0.077054	1	0.22459	1	0.6305	1	0.14711	1	0.27242	1	0.25325	1
Del Peak 22(12q24.33)	0 (0%)	351	0.68798	1	0.10598	1	0.12963	1	0.65197	1	0.46787	1	0.29529	1	0.079332	1
Del Peak 23(13q14.2)	0 (0%)	213	0.060689	1	0.54946	1	0.77706	1	0.59232	1	0.21301	1	0.56044	1	0.2047	1
Del Peak 24(14q23.3)	0 (0%)	267	0.48832	1	0.6038	1	0.47495	1	0.012285	1	0.32314	1	0.1066	1	0.37857	1
Del Peak 25(15q15.1)	0 (0%)	209	0.63148	1	0.0053407	1	0.41147	1	0.25272	1	0.61027	1	0.29799	1	0.80346	1
Del Peak 26(16p13.3)	0 (0%)	263	0.8432	1	0.86681	1	0.751	1	0.57764	1	0.90822	1	0.60182	1	0.73279	1
Del Peak 27(16q22.1)	0 (0%)	115	0.62477	1	0.0043833	1	0.19319	1	0.27537	1	0.076174	1	1	1	0.32876	1
Del Peak 28(16q23.1)	0 (0%)	125	0.15286	1	8.1188e-05	0.0386	0.63633	1	0.077815	1	0.043207	1	1	1	0.19471	1
Del Peak 29(17p12)	0 (0%)	87	0.81847	1	0.98953	1	0.49311	1	0.73023	1	0.58805	1	1	1	0.47013	1
Del Peak 30(17q11.2)	0 (0%)	102	0.61844	1	0.032309	1	0.066632	1	0.68639	1	0.75552	1	1	1	0.87321	1
Del Peak 31(18q23)	0 (0%)	194	0.70387	1	0.46376	1	0.22459	1	0.54379	1	1	1	1	1	1	1
Del Peak 32(19p13.3)	0 (0%)	67	0.24391	1	0.016801	1	1	1	0.008327	1	0.65542	1	1	1	0.42274	1
Del Peak 33(19q13.33)	0 (0%)	271	0.56279	1	0.34309	1	1	1	0.31129	1	0.01355	1	0.24961	1	0.29242	1
Del Peak 34(19q13.43)	0 (0%)	286	0.35857	1	0.029971	1	1	1	0.28294	1	0.010463	1	1	1	0.25228	1
Del Peak 35(21q22.3)	0 (0%)	345	0.5537	1	0.34098	1	0.77386	1	0.66531	1	0.77819	1	1	1	0.58539	1
Del Peak 36(22q13.32)	0 (0%)	75	0.86083	1	0.909	1	0.44336	1	0.75231	1	0.37529	1	1	1	0.6748	1
Del Peak 37(Xp21.1)	0 (0%)	202	0.80431	1	0.38372	1	1	1	0.98653	1	0.17815	1	0.55641	1	0.73279	1