Molecular subtypes	CN_CNMF		METHLYATION_CNMF		MRNASEQ_CNMF		MRNASEQ_CHIERARCHICAL		MIRSEQ_CNMF		MIRSEQ_CHIERARCHICAL		MIRSEQ_MATURE_CNMF		MIRSEQ_MATURE_CHIERARCHICAL	
	nCNV (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
1q gain	0 (0%)	47	0.044898	1	0.056231	1	0.48846	1	NA	NA	NA	NA	NA	NA	0.48837	1	NA	NA
8q gain	0 (0%)	43	0.0060468	0.774	0.040549	1	0.18555	1	0.2578	1	0.2192	1	0.030525	1	0.094572	1	0.030525	1
18p gain	0 (0%)	45	0.010532	1	0.11971	1	0.23269	1	0.31346	1	0.40354	1	0.063706	1	0.10777	1	0.063706	1
20q gain	0 (0%)	46	0.0030612	0.41	0.53755	1	1	1	1	1	0.35295	1	0.51518	1	0.60692	1	0.51518	1
6p loss	0 (0%)	45	0.015204	1	0.0049085	0.638	0.048597	1	0.060464	1	0.018432	1	0.01802	1	0.048497	1	0.01802	1
6q loss	0 (0%)	42	0.013955	1	0.00016311	0.0228	0.021206	1	0.034125	1	0.0037443	0.49	0.0075552	0.944	0.02114	1	0.0075552	0.944
9p loss	0 (0%)	42	0.0014044	0.192	0.0025421	0.343	0.18555	1	0.034125	1	0.064912	1	0.11893	1	0.02114	1	0.11893	1
9q loss	0 (0%)	47	0.23714	1	0.056231	1	1	1	NA	NA	NA	NA	NA	NA	1	1	NA	NA
10p loss	0 (0%)	47	0.017347	1	0.056231	1	0.48846	1	NA	NA	0.03089	1	0.21749	1	0.23256	1	0.21749	1
10q loss	0 (0%)	47	0.078571	1	0.056231	1	0.48846	1	NA	NA	0.19766	1	0.21749	1	0.23256	1	0.21749	1
12p loss	0 (0%)	47	0.044898	1	0.056231	1	0.23269	1	0.31346	1	0.19766	1	0.21749	1	0.23256	1	0.21749	1
12q loss	0 (0%)	45	0.015204	1	0.0049085	0.638	0.60707	1	0.18358	1	0.42158	1	0.51518	1	0.10777	1	0.51518	1
13q loss	0 (0%)	47	0.017347	1	0.34102	1	0.48846	1	NA	NA	0.03089	1	0.21749	1	0.23256	1	0.21749	1
17p loss	0 (0%)	40	1.8267e-05	0.00258	0.0020227	0.275	0.41242	1	0.010118	1	0.18414	1	0.036725	1	0.02125	1	0.036725	1
17q loss	0 (0%)	46	0.0030612	0.41	0.016779	1	1	1	0.31346	1	0.11428	1	0.51518	1	0.10777	1	0.51518	1
18p loss	0 (0%)	46	0.031763	1	0.016779	1	1	1	0.31346	1	0.5682	1	0.78997	1	1	1	0.78997	1
18q loss	0 (0%)	43	0.00096808	0.135	0.0069449	0.882	0.66424	1	0.034125	1	0.046088	1	0.39621	1	0.18528	1	0.39621	1
21q loss	0 (0%)	43	0.00096808	0.135	0.0069449	0.882	0.021206	1	0.034125	1	0.062506	1	0.11893	1	0.02114	1	0.11893	1
22q loss	0 (0%)	46	0.0030612	0.41	0.11971	1	0.23269	1	0.31346	1	0.19766	1	0.21749	1	0.23256	1	0.21749	1