name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme	callscheme_name	N_tot	nsil_tot	nnon_tot	rate_sil	rate_non
TCGA-CH-5737-01A-11D-1576-08	108	107	1	79	9.259259e-03	0	coding only	34834024	28	79	8.038118e-07	2.267898e-06
TCGA-CH-5738-01A-11D-1576-08	58	56	2	43	3.448276e-02	1	exome+100bp flanks	34834024	13	43	3.731983e-07	1.234425e-06
TCGA-CH-5739-01A-11D-1576-08	54	53	1	42	1.851852e-02	0	coding only	34834024	11	40	3.157832e-07	1.148303e-06
TCGA-CH-5740-01A-11D-1576-08	53	52	1	42	1.886792e-02	0	coding only	34834024	9	40	2.583681e-07	1.148303e-06
TCGA-CH-5741-01A-11D-1576-08	56	53	3	42	5.357143e-02	1	exome+100bp flanks	34834024	10	41	2.870756e-07	1.177010e-06
TCGA-CH-5743-01A-21D-1576-08	11	11	0	11	0	1	exome+100bp flanks	34834024	0	10	0	2.870756e-07
TCGA-CH-5744-01A-11D-1576-08	62	59	3	39	4.838710e-02	1	exome+100bp flanks	34834024	20	37	5.741513e-07	1.062180e-06
TCGA-CH-5745-01A-11D-1576-08	50	47	3	37	6.000000e-02	1	exome+100bp flanks	34834024	9	37	2.583681e-07	1.062180e-06
TCGA-CH-5746-01A-11D-1576-08	55	52	3	38	5.454545e-02	1	exome+100bp flanks	34834024	13	38	3.731983e-07	1.090887e-06
TCGA-CH-5748-01A-11D-1576-08	77	72	5	48	6.493506e-02	1	exome+100bp flanks	34834024	24	47	6.889816e-07	1.349256e-06
TCGA-CH-5750-01A-11D-1576-08	79	77	2	52	2.531646e-02	0	coding only	34834024	24	50	6.889816e-07	1.435378e-06
TCGA-CH-5751-01A-11D-1576-08	49	45	4	34	8.163265e-02	1	exome+100bp flanks	34834024	10	33	2.870756e-07	9.473496e-07
TCGA-CH-5752-01A-11D-1576-08	92	90	2	67	2.173913e-02	0	coding only	34834024	22	66	6.315664e-07	1.894699e-06
TCGA-CH-5753-01A-11D-1576-08	82	72	10	60	1.219512e-01	1	exome+100bp flanks	34834024	12	59	3.444908e-07	1.693746e-06
TCGA-CH-5754-01A-11D-1576-08	131	128	3	88	2.290076e-02	0	coding only	34834024	39	88	1.119595e-06	2.526266e-06
TCGA-CH-5761-01A-11D-1576-08	83	81	2	62	2.409639e-02	0	coding only	34834024	19	61	5.454437e-07	1.751161e-06
TCGA-CH-5762-01A-11D-1576-08	69	65	4	49	5.797101e-02	1	exome+100bp flanks	34834024	16	48	4.593210e-07	1.377963e-06
TCGA-CH-5763-01A-11D-1576-08	31	31	0	21	0	1	exome+100bp flanks	34834024	10	19	2.870756e-07	5.454437e-07
TCGA-CH-5764-01A-21D-1576-08	73	70	3	62	4.109589e-02	1	exome+100bp flanks	34834024	7	57	2.009530e-07	1.636331e-06
TCGA-CH-5765-01A-11D-1576-08	71	70	1	52	1.408451e-02	0	coding only	34834024	18	48	5.167362e-07	1.377963e-06
TCGA-CH-5766-01A-11D-1576-08	39	39	0	27	0	1	exome+100bp flanks	34834024	12	26	3.444908e-07	7.463967e-07
TCGA-CH-5767-01A-11D-1786-08	57	55	2	45	3.508772e-02	1	exome+100bp flanks	34834024	10	44	2.870756e-07	1.263133e-06
TCGA-CH-5768-01A-11D-1576-08	80	78	2	61	2.500000e-02	0	coding only	34834024	17	61	4.880286e-07	1.751161e-06
TCGA-CH-5769-01A-11D-1576-08	157	152	5	106	3.184713e-02	1	exome+100bp flanks	34834024	46	104	1.320548e-06	2.985587e-06
TCGA-CH-5771-01A-21D-1576-08	52	49	3	36	5.769231e-02	1	exome+100bp flanks	34834024	13	35	3.731983e-07	1.004765e-06
TCGA-CH-5772-01A-11D-1576-08	127	120	7	84	5.511811e-02	1	exome+100bp flanks	34834024	35	81	1.004765e-06	2.325313e-06
TCGA-CH-5788-01A-11D-1576-08	54	54	0	39	0	0	coding only	34834024	14	39	4.019059e-07	1.119595e-06
TCGA-CH-5789-01A-11D-1576-08	37	33	4	20	1.081081e-01	1	exome+100bp flanks	34834024	12	19	3.444908e-07	5.454437e-07
TCGA-CH-5790-01A-11D-1576-08	45	39	6	29	1.333333e-01	1	exome+100bp flanks	34834024	10	29	2.870756e-07	8.325194e-07
TCGA-CH-5791-01A-11D-1576-08	81	78	3	56	3.703704e-02	1	exome+100bp flanks	34834024	22	55	6.315664e-07	1.578916e-06
TCGA-CH-5792-01A-11D-1576-08	67	63	4	47	5.970149e-02	1	exome+100bp flanks	34834024	16	45	4.593210e-07	1.291840e-06
TCGA-CH-5794-01A-11D-1576-08	49	45	4	29	8.163265e-02	1	exome+100bp flanks	34834024	15	29	4.306135e-07	8.325194e-07
TCGA-EJ-5494-01A-01D-1576-08	42	42	0	33	0	1	exome+100bp flanks	34834024	9	32	2.583681e-07	9.186421e-07
TCGA-EJ-5495-01A-01D-1576-08	126	113	13	85	1.031746e-01	1	exome+100bp flanks	34834024	28	82	8.038118e-07	2.354020e-06
TCGA-EJ-5496-01A-01D-1576-08	80	78	2	59	2.500000e-02	0	coding only	34834024	18	58	5.167362e-07	1.665039e-06
TCGA-EJ-5497-01A-02D-1576-08	57	51	6	37	1.052632e-01	1	exome+100bp flanks	34834024	14	35	4.019059e-07	1.004765e-06
TCGA-EJ-5498-01A-01D-1576-08	68	64	4	44	5.882353e-02	1	exome+100bp flanks	34834024	19	43	5.454437e-07	1.234425e-06
TCGA-EJ-5499-01A-01D-1576-08	54	49	5	35	9.259259e-02	1	exome+100bp flanks	34834024	11	32	3.157832e-07	9.186421e-07
TCGA-EJ-5501-01A-01D-1576-08	41	35	6	25	1.463415e-01	1	exome+100bp flanks	34834024	9	24	2.583681e-07	6.889816e-07
TCGA-EJ-5502-01A-01D-1576-08	15	14	1	11	6.666667e-02	1	exome+100bp flanks	34834024	3	10	8.612269e-08	2.870756e-07
TCGA-EJ-5503-01A-01D-1576-08	58	54	4	39	6.896552e-02	1	exome+100bp flanks	34834024	15	36	4.306135e-07	1.033472e-06
TCGA-EJ-5504-01A-01D-1576-08	85	81	4	62	4.705882e-02	1	exome+100bp flanks	34834024	18	61	5.167362e-07	1.751161e-06
TCGA-EJ-5505-01A-01D-1576-08	48	46	2	37	4.166667e-02	1	exome+100bp flanks	34834024	8	36	2.296605e-07	1.033472e-06
TCGA-EJ-5506-01A-01D-1576-08	29	29	0	19	0	1	exome+100bp flanks	34834024	9	17	2.583681e-07	4.880286e-07
TCGA-EJ-5507-01A-01D-1576-08	67	65	2	50	2.985075e-02	0	coding only	34834024	15	49	4.306135e-07	1.406671e-06
TCGA-EJ-5508-01A-02D-1576-08	50	47	3	35	6.000000e-02	1	exome+100bp flanks	34834024	10	35	2.870756e-07	1.004765e-06
TCGA-EJ-5509-01A-01D-1576-08	64	60	4	44	6.250000e-02	1	exome+100bp flanks	34834024	15	44	4.306135e-07	1.263133e-06
TCGA-EJ-5510-01A-01D-1576-08	39	37	2	27	5.128205e-02	1	exome+100bp flanks	34834024	10	25	2.870756e-07	7.176891e-07
TCGA-EJ-5511-01A-01D-1576-08	57	55	2	38	3.508772e-02	1	exome+100bp flanks	34834024	16	37	4.593210e-07	1.062180e-06
TCGA-EJ-5512-01A-01D-1576-08	47	45	2	38	4.255319e-02	1	exome+100bp flanks	34834024	7	38	2.009530e-07	1.090887e-06
TCGA-EJ-5514-01A-01D-1576-08	77	74	3	49	3.896104e-02	1	exome+100bp flanks	34834024	25	48	7.176891e-07	1.377963e-06
TCGA-EJ-5515-01A-01D-1576-08	37	35	2	27	5.405405e-02	1	exome+100bp flanks	34834024	8	26	2.296605e-07	7.463967e-07
TCGA-EJ-5516-01A-01D-1576-08	61	60	1	44	1.639344e-02	0	coding only	34834024	16	43	4.593210e-07	1.234425e-06
TCGA-EJ-5517-01A-01D-1576-08	60	58	2	42	3.333333e-02	1	exome+100bp flanks	34834024	16	42	4.593210e-07	1.205718e-06
TCGA-EJ-5518-01A-01D-1576-08	64	63	1	46	1.562500e-02	0	coding only	34834024	17	45	4.880286e-07	1.291840e-06
TCGA-EJ-5519-01A-01D-1576-08	137	137	0	101	0	0	coding only	34834024	36	97	1.033472e-06	2.784634e-06
TCGA-EJ-5521-01A-01D-1576-08	83	82	1	56	1.204819e-02	0	coding only	34834024	26	56	7.463967e-07	1.607624e-06
TCGA-EJ-5522-01A-01D-1576-08	52	49	3	27	5.769231e-02	1	exome+100bp flanks	34834024	22	26	6.315664e-07	7.463967e-07
TCGA-EJ-5524-01A-01D-1576-08	76	74	2	51	2.631579e-02	0	coding only	34834024	23	50	6.602740e-07	1.435378e-06
TCGA-EJ-5525-01A-01D-1576-08	104	103	1	83	9.615385e-03	0	coding only	34834024	20	79	5.741513e-07	2.267898e-06
TCGA-EJ-5526-01A-01D-1576-08	44	43	1	34	2.272727e-02	1	exome+100bp flanks	34834024	9	34	2.583681e-07	9.760572e-07
TCGA-EJ-5527-01A-01D-1576-08	62	61	1	38	1.612903e-02	0	coding only	34834024	22	37	6.315664e-07	1.062180e-06
TCGA-EJ-5530-01A-01D-1576-08	98	92	6	71	6.122449e-02	1	exome+100bp flanks	34834024	21	69	6.028589e-07	1.980822e-06
TCGA-EJ-5531-01A-01D-1576-08	127	125	2	62	1.574803e-02	0	coding only	34834024	62	58	1.779869e-06	1.665039e-06
TCGA-EJ-5532-01A-01D-1576-08	41	39	2	28	4.878049e-02	1	exome+100bp flanks	34834024	11	26	3.157832e-07	7.463967e-07
TCGA-EJ-5542-01A-01D-1576-08	55	51	4	39	7.272727e-02	1	exome+100bp flanks	34834024	11	38	3.157832e-07	1.090887e-06
TCGA-G9-6332-01A-11D-1786-08	80	72	8	49	1.000000e-01	1	exome+100bp flanks	34834024	22	46	6.315664e-07	1.320548e-06
TCGA-G9-6336-01A-11D-1786-08	40	37	3	28	7.500000e-02	1	exome+100bp flanks	34834024	8	26	2.296605e-07	7.463967e-07
TCGA-G9-6348-01A-11D-1786-08	63	60	3	40	4.761905e-02	1	exome+100bp flanks	34834024	19	40	5.454437e-07	1.148303e-06
TCGA-G9-6356-01A-11D-1786-08	81	73	8	48	9.876543e-02	1	exome+100bp flanks	34834024	25	47	7.176891e-07	1.349256e-06
TCGA-G9-6362-01A-11D-1786-08	72	71	1	41	1.388889e-02	0	coding only	34834024	29	41	8.325194e-07	1.177010e-06
TCGA-G9-6363-01A-21D-1786-08	82	80	2	69	2.439024e-02	0	coding only	34834024	11	65	3.157832e-07	1.865992e-06
TCGA-G9-6364-01A-21D-1786-08	40	38	2	25	5.000000e-02	1	exome+100bp flanks	34834024	11	23	3.157832e-07	6.602740e-07
TCGA-G9-6365-01A-11D-1786-08	55	52	3	44	5.454545e-02	1	exome+100bp flanks	34834024	8	43	2.296605e-07	1.234425e-06
TCGA-G9-6367-01A-11D-1786-08	28	25	3	13	1.071429e-01	1	exome+100bp flanks	34834024	12	11	3.444908e-07	3.157832e-07
TCGA-G9-6370-01A-11D-1786-08	15	15	0	9	0	1	exome+100bp flanks	34834024	4	8	1.148303e-07	2.296605e-07
TCGA-G9-6371-01A-11D-1786-08	62	60	2	44	3.225806e-02	1	exome+100bp flanks	34834024	15	42	4.306135e-07	1.205718e-06
TCGA-G9-6373-01A-11D-1786-08	51	49	2	32	3.921569e-02	1	exome+100bp flanks	34834024	16	30	4.593210e-07	8.612269e-07
TCGA-G9-6378-01A-11D-1786-08	51	46	5	32	9.803922e-02	1	exome+100bp flanks	34834024	14	30	4.019059e-07	8.612269e-07
TCGA-G9-6384-01A-11D-1786-08	47	47	0	35	0	1	exome+100bp flanks	34834024	12	35	3.444908e-07	1.004765e-06
TCGA-G9-6385-01A-11D-1786-08	27	27	0	20	0	1	exome+100bp flanks	34834024	6	20	1.722454e-07	5.741513e-07
TCGA-G9-6494-01A-11D-1786-08	59	58	1	44	1.694915e-02	0	coding only	34834024	13	41	3.731983e-07	1.177010e-06
TCGA-G9-6496-01A-11D-1786-08	68	63	5	43	7.352941e-02	1	exome+100bp flanks	34834024	20	41	5.741513e-07	1.177010e-06