
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/Correlate_Cluster_cnvarms_onlysig/broadinstitute.org/cancer.genome.analysis/00508/6/CNV2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/Correlate_Cluster_cnvarms_onlysig/broadinstitute.org/cancer.genome.analysis/00508/6/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac/jobResults/cnvarms2cluster/CESC-TP/4430989/broad_values_by_arm.mutsig.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering_new/CESC-TP/4430814/CESC-TP.transferedmergedcluster.txt", "-fF=", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=CESC-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=CESC-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=163, in cluster file=155, common to both=155
[1] "Reduce the number of clustering variables from 80 to 74."
[1]  74 155
[1] "1p gain"
[1] 3
      1P GAIN CNV 1P GAIN WILD-TYPE 
               41               114 
      1P GAIN CNV 1P GAIN WILD-TYPE 
               41               114 
[1] "1q gain"
[1] 3
      1Q GAIN CNV 1Q GAIN WILD-TYPE 
               58                97 
      1Q GAIN CNV 1Q GAIN WILD-TYPE 
               58                97 
[1] "2p gain"
[1] 3
      2P GAIN CNV 2P GAIN WILD-TYPE 
               23               132 
      2P GAIN CNV 2P GAIN WILD-TYPE 
               23               132 
[1] "2q gain"
[1] 3
      2Q GAIN CNV 2Q GAIN WILD-TYPE 
                6               149 
      2Q GAIN CNV 2Q GAIN WILD-TYPE 
                6               149 
[1] "3p gain"
[1] 3
      3P GAIN CNV 3P GAIN WILD-TYPE 
               21               134 
      3P GAIN CNV 3P GAIN WILD-TYPE 
               21               134 
[1] "3q gain"
[1] 3
      3Q GAIN CNV 3Q GAIN WILD-TYPE 
               76                79 
      3Q GAIN CNV 3Q GAIN WILD-TYPE 
               76                79 
[1] "4q gain"
[1] 3
      4Q GAIN CNV 4Q GAIN WILD-TYPE 
                3               152 
      4Q GAIN CNV 4Q GAIN WILD-TYPE 
                3               152 
[1] "5p gain"
[1] 3
      5P GAIN CNV 5P GAIN WILD-TYPE 
               51               104 
      5P GAIN CNV 5P GAIN WILD-TYPE 
               51               104 
[1] "5q gain"
[1] 3
      5Q GAIN CNV 5Q GAIN WILD-TYPE 
               15               140 
      5Q GAIN CNV 5Q GAIN WILD-TYPE 
               15               140 
[1] "6p gain"
[1] 3
      6P GAIN CNV 6P GAIN WILD-TYPE 
               21               134 
      6P GAIN CNV 6P GAIN WILD-TYPE 
               21               134 
[1] "6q gain"
[1] 3
      6Q GAIN CNV 6Q GAIN WILD-TYPE 
               10               145 
      6Q GAIN CNV 6Q GAIN WILD-TYPE 
               10               145 
[1] "7p gain"
[1] 3
      7P GAIN CNV 7P GAIN WILD-TYPE 
                9               146 
      7P GAIN CNV 7P GAIN WILD-TYPE 
                9               146 
[1] "7q gain"
[1] 3
      7Q GAIN CNV 7Q GAIN WILD-TYPE 
               12               143 
      7Q GAIN CNV 7Q GAIN WILD-TYPE 
               12               143 
[1] "8p gain"
[1] 3
      8P GAIN CNV 8P GAIN WILD-TYPE 
               14               141 
      8P GAIN CNV 8P GAIN WILD-TYPE 
               14               141 
[1] "8q gain"
[1] 3
      8Q GAIN CNV 8Q GAIN WILD-TYPE 
               29               126 
      8Q GAIN CNV 8Q GAIN WILD-TYPE 
               29               126 
[1] "9p gain"
[1] 3
      9P GAIN CNV 9P GAIN WILD-TYPE 
               18               137 
      9P GAIN CNV 9P GAIN WILD-TYPE 
               18               137 
[1] "9q gain"
[1] 3
      9Q GAIN CNV 9Q GAIN WILD-TYPE 
               17               138 
      9Q GAIN CNV 9Q GAIN WILD-TYPE 
               17               138 
[1] "10p gain"
[1] 3
      10P GAIN CNV 10P GAIN WILD-TYPE 
                 8                147 
      10P GAIN CNV 10P GAIN WILD-TYPE 
                 8                147 
[1] "10q gain"
[1] 3
      10Q GAIN CNV 10Q GAIN WILD-TYPE 
                 3                152 
      10Q GAIN CNV 10Q GAIN WILD-TYPE 
                 3                152 
[1] "12p gain"
[1] 3
      12P GAIN CNV 12P GAIN WILD-TYPE 
                18                137 
      12P GAIN CNV 12P GAIN WILD-TYPE 
                18                137 
[1] "12q gain"
[1] 3
      12Q GAIN CNV 12Q GAIN WILD-TYPE 
                16                139 
      12Q GAIN CNV 12Q GAIN WILD-TYPE 
                16                139 
[1] "13q gain"
[1] 3
      13Q GAIN CNV 13Q GAIN WILD-TYPE 
                 8                147 
      13Q GAIN CNV 13Q GAIN WILD-TYPE 
                 8                147 
[1] "14q gain"
[1] 3
      14Q GAIN CNV 14Q GAIN WILD-TYPE 
                15                140 
      14Q GAIN CNV 14Q GAIN WILD-TYPE 
                15                140 
[1] "15q gain"
[1] 3
      15Q GAIN CNV 15Q GAIN WILD-TYPE 
                18                137 
      15Q GAIN CNV 15Q GAIN WILD-TYPE 
                18                137 
[1] "16p gain"
[1] 3
      16P GAIN CNV 16P GAIN WILD-TYPE 
                17                138 
      16P GAIN CNV 16P GAIN WILD-TYPE 
                17                138 
[1] "16q gain"
[1] 3
      16Q GAIN CNV 16Q GAIN WILD-TYPE 
                10                145 
      16Q GAIN CNV 16Q GAIN WILD-TYPE 
                10                145 
[1] "17p gain"
[1] 3
      17P GAIN CNV 17P GAIN WILD-TYPE 
                 7                148 
      17P GAIN CNV 17P GAIN WILD-TYPE 
                 7                148 
[1] "17q gain"
[1] 3
      17Q GAIN CNV 17Q GAIN WILD-TYPE 
                17                138 
      17Q GAIN CNV 17Q GAIN WILD-TYPE 
                17                138 
[1] "18p gain"
[1] 3
      18P GAIN CNV 18P GAIN WILD-TYPE 
                16                139 
      18P GAIN CNV 18P GAIN WILD-TYPE 
                16                139 
[1] "18q gain"
[1] 3
      18Q GAIN CNV 18Q GAIN WILD-TYPE 
                 8                147 
      18Q GAIN CNV 18Q GAIN WILD-TYPE 
                 8                147 
[1] "19p gain"
[1] 3
      19P GAIN CNV 19P GAIN WILD-TYPE 
                13                142 
      19P GAIN CNV 19P GAIN WILD-TYPE 
                13                142 
[1] "19q gain"
[1] 3
      19Q GAIN CNV 19Q GAIN WILD-TYPE 
                27                128 
      19Q GAIN CNV 19Q GAIN WILD-TYPE 
                27                128 
[1] "20p gain"
[1] 3
      20P GAIN CNV 20P GAIN WILD-TYPE 
                37                118 
      20P GAIN CNV 20P GAIN WILD-TYPE 
                37                118 
[1] "20q gain"
[1] 3
      20Q GAIN CNV 20Q GAIN WILD-TYPE 
                44                111 
      20Q GAIN CNV 20Q GAIN WILD-TYPE 
                44                111 
[1] "21q gain"
[1] 3
      21Q GAIN CNV 21Q GAIN WILD-TYPE 
                16                139 
      21Q GAIN CNV 21Q GAIN WILD-TYPE 
                16                139 
[1] "22q gain"
[1] 3
      22Q GAIN CNV 22Q GAIN WILD-TYPE 
                12                143 
      22Q GAIN CNV 22Q GAIN WILD-TYPE 
                12                143 
[1] "Xq gain"
[1] 3
      XQ GAIN CNV XQ GAIN WILD-TYPE 
               11               144 
      XQ GAIN CNV XQ GAIN WILD-TYPE 
               11               144 
[1] "1q loss"
[1] 3
      1Q LOSS CNV 1Q LOSS WILD-TYPE 
                3               152 
      1Q LOSS CNV 1Q LOSS WILD-TYPE 
                3               152 
[1] "2p loss"
[1] 3
      2P LOSS CNV 2P LOSS WILD-TYPE 
                4               151 
      2P LOSS CNV 2P LOSS WILD-TYPE 
                4               151 
[1] "2q loss"
[1] 3
      2Q LOSS CNV 2Q LOSS WILD-TYPE 
                8               147 
      2Q LOSS CNV 2Q LOSS WILD-TYPE 
                8               147 
[1] "3p loss"
[1] 3
      3P LOSS CNV 3P LOSS WILD-TYPE 
               32               123 
      3P LOSS CNV 3P LOSS WILD-TYPE 
               32               123 
[1] "4p loss"
[1] 3
      4P LOSS CNV 4P LOSS WILD-TYPE 
               50               105 
      4P LOSS CNV 4P LOSS WILD-TYPE 
               50               105 
[1] "4q loss"
[1] 3
      4Q LOSS CNV 4Q LOSS WILD-TYPE 
               30               125 
      4Q LOSS CNV 4Q LOSS WILD-TYPE 
               30               125 
[1] "5p loss"
[1] 3
      5P LOSS CNV 5P LOSS WILD-TYPE 
                3               152 
      5P LOSS CNV 5P LOSS WILD-TYPE 
                3               152 
[1] "5q loss"
[1] 3
      5Q LOSS CNV 5Q LOSS WILD-TYPE 
               22               133 
      5Q LOSS CNV 5Q LOSS WILD-TYPE 
               22               133 
[1] "6p loss"
[1] 3
      6P LOSS CNV 6P LOSS WILD-TYPE 
               16               139 
      6P LOSS CNV 6P LOSS WILD-TYPE 
               16               139 
[1] "6q loss"
[1] 3
      6Q LOSS CNV 6Q LOSS WILD-TYPE 
               28               127 
      6Q LOSS CNV 6Q LOSS WILD-TYPE 
               28               127 
[1] "7p loss"
[1] 3
      7P LOSS CNV 7P LOSS WILD-TYPE 
                6               149 
      7P LOSS CNV 7P LOSS WILD-TYPE 
                6               149 
[1] "7q loss"
[1] 3
      7Q LOSS CNV 7Q LOSS WILD-TYPE 
               15               140 
      7Q LOSS CNV 7Q LOSS WILD-TYPE 
               15               140 
[1] "8p loss"
[1] 3
      8P LOSS CNV 8P LOSS WILD-TYPE 
               29               126 
      8P LOSS CNV 8P LOSS WILD-TYPE 
               29               126 
[1] "8q loss"
[1] 3
      8Q LOSS CNV 8Q LOSS WILD-TYPE 
                7               148 
      8Q LOSS CNV 8Q LOSS WILD-TYPE 
                7               148 
[1] "9p loss"
[1] 3
      9P LOSS CNV 9P LOSS WILD-TYPE 
               13               142 
      9P LOSS CNV 9P LOSS WILD-TYPE 
               13               142 
[1] "9q loss"
[1] 3
      9Q LOSS CNV 9Q LOSS WILD-TYPE 
               11               144 
      9Q LOSS CNV 9Q LOSS WILD-TYPE 
               11               144 
[1] "10p loss"
[1] 3
      10P LOSS CNV 10P LOSS WILD-TYPE 
                25                130 
      10P LOSS CNV 10P LOSS WILD-TYPE 
                25                130 
[1] "10q loss"
[1] 3
      10Q LOSS CNV 10Q LOSS WILD-TYPE 
                27                128 
      10Q LOSS CNV 10Q LOSS WILD-TYPE 
                27                128 
[1] "11p loss"
[1] 3
      11P LOSS CNV 11P LOSS WILD-TYPE 
                33                122 
      11P LOSS CNV 11P LOSS WILD-TYPE 
                33                122 
[1] "11q loss"
[1] 3
      11Q LOSS CNV 11Q LOSS WILD-TYPE 
                36                119 
      11Q LOSS CNV 11Q LOSS WILD-TYPE 
                36                119 
[1] "12p loss"
[1] 3
      12P LOSS CNV 12P LOSS WILD-TYPE 
                19                136 
      12P LOSS CNV 12P LOSS WILD-TYPE 
                19                136 
[1] "12q loss"
[1] 3
      12Q LOSS CNV 12Q LOSS WILD-TYPE 
                 4                151 
      12Q LOSS CNV 12Q LOSS WILD-TYPE 
                 4                151 
[1] "13q loss"
[1] 3
      13Q LOSS CNV 13Q LOSS WILD-TYPE 
                27                128 
      13Q LOSS CNV 13Q LOSS WILD-TYPE 
                27                128 
[1] "14q loss"
[1] 3
      14Q LOSS CNV 14Q LOSS WILD-TYPE 
                 7                148 
      14Q LOSS CNV 14Q LOSS WILD-TYPE 
                 7                148 
[1] "15q loss"
[1] 3
      15Q LOSS CNV 15Q LOSS WILD-TYPE 
                 9                146 
      15Q LOSS CNV 15Q LOSS WILD-TYPE 
                 9                146 
[1] "16p loss"
[1] 3
      16P LOSS CNV 16P LOSS WILD-TYPE 
                 9                146 
      16P LOSS CNV 16P LOSS WILD-TYPE 
                 9                146 
[1] "16q loss"
[1] 3
      16Q LOSS CNV 16Q LOSS WILD-TYPE 
                16                139 
      16Q LOSS CNV 16Q LOSS WILD-TYPE 
                16                139 
[1] "17p loss"
[1] 3
      17P LOSS CNV 17P LOSS WILD-TYPE 
                31                124 
      17P LOSS CNV 17P LOSS WILD-TYPE 
                31                124 
[1] "17q loss"
[1] 3
      17Q LOSS CNV 17Q LOSS WILD-TYPE 
                 6                149 
      17Q LOSS CNV 17Q LOSS WILD-TYPE 
                 6                149 
[1] "18p loss"
[1] 3
      18P LOSS CNV 18P LOSS WILD-TYPE 
                17                138 
      18P LOSS CNV 18P LOSS WILD-TYPE 
                17                138 
[1] "18q loss"
[1] 3
      18Q LOSS CNV 18Q LOSS WILD-TYPE 
                26                129 
      18Q LOSS CNV 18Q LOSS WILD-TYPE 
                26                129 
[1] "19p loss"
[1] 3
      19P LOSS CNV 19P LOSS WILD-TYPE 
                12                143 
      19P LOSS CNV 19P LOSS WILD-TYPE 
                12                143 
[1] "19q loss"
[1] 3
      19Q LOSS CNV 19Q LOSS WILD-TYPE 
                 6                149 
      19Q LOSS CNV 19Q LOSS WILD-TYPE 
                 6                149 
[1] "20p loss"
[1] 3
      20P LOSS CNV 20P LOSS WILD-TYPE 
                 8                147 
      20P LOSS CNV 20P LOSS WILD-TYPE 
                 8                147 
[1] "21q loss"
[1] 3
      21Q LOSS CNV 21Q LOSS WILD-TYPE 
                13                142 
      21Q LOSS CNV 21Q LOSS WILD-TYPE 
                13                142 
[1] "22q loss"
[1] 3
      22Q LOSS CNV 22Q LOSS WILD-TYPE 
                17                138 
      22Q LOSS CNV 22Q LOSS WILD-TYPE 
                17                138 
[1] "Xq loss"
[1] 3
      XQ LOSS CNV XQ LOSS WILD-TYPE 
                3               152 
      XQ LOSS CNV XQ LOSS WILD-TYPE 
                3               152 
[1] "data2feature, selection="
[1] "CN_CNMF"                     "METHLYATION_CNMF"           
[3] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
[5] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[7] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 8 rows and 155 columns.

Variable 1:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=7,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'MRNASEQ_CNMF':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MIRSEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MIRSEQ_MATURE_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
[1] "CN_CNMF"                     "METHLYATION_CNMF"           
[3] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
[5] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[7] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 155 columns, 0 survival variables, and 8 non-survival variables.
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=7, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=5, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=2, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = 1p gain
D1V1, multiclass
        clus
vv       1P GAIN CNV 1P GAIN WILD-TYPE
  CLUS_1          18                36
  CLUS_2           9                34
  CLUS_3          14                44
D1V2, multiclass
D1V3, multiclass
D1V4, multiclass
        clus
vv       1P GAIN CNV 1P GAIN WILD-TYPE
  CLUS_1          10                37
  CLUS_2          22                51
  CLUS_3           6                14
D1V5, multiclass
        clus
vv       1P GAIN CNV 1P GAIN WILD-TYPE
  CLUS_1           9                24
  CLUS_2          11                32
  CLUS_3           3                10
  CLUS_4          11                26
D1V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  1P GAIN CNV         23   11
  1P GAIN WILD-TYPE   65   27
        clus
vv       1P GAIN CNV 1P GAIN WILD-TYPE
  CLUS_1          23                65
  CLUS_2          11                27
D1V7, multiclass
        clus
vv       1P GAIN CNV 1P GAIN WILD-TYPE
  CLUS_1          16                34
  CLUS_2           9                25
  CLUS_3           9                33
D1V8, multiclass
        clus
vv       1P GAIN CNV 1P GAIN WILD-TYPE
  CLUS_1          14                33
  CLUS_2           9                32
  CLUS_3          11                27

Clustering(2) Variable = 1q gain
D2V1, multiclass
        clus
vv       1Q GAIN CNV 1Q GAIN WILD-TYPE
  CLUS_1          28                26
  CLUS_2          14                29
  CLUS_3          16                42
D2V2, multiclass
D2V3, multiclass
D2V4, multiclass
        clus
vv       1Q GAIN CNV 1Q GAIN WILD-TYPE
  CLUS_1          17                30
  CLUS_2          25                48
  CLUS_3          11                 9
D2V5, multiclass
        clus
vv       1Q GAIN CNV 1Q GAIN WILD-TYPE
  CLUS_1          12                21
  CLUS_2          12                31
  CLUS_3           6                 7
  CLUS_4          18                19
D2V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  1Q GAIN CNV         29   19
  1Q GAIN WILD-TYPE   59   19
        clus
vv       1Q GAIN CNV 1Q GAIN WILD-TYPE
  CLUS_1          29                59
  CLUS_2          19                19
D2V7, multiclass
        clus
vv       1Q GAIN CNV 1Q GAIN WILD-TYPE
  CLUS_1          19                31
  CLUS_2          12                22
  CLUS_3          17                25
D2V8, multiclass
        clus
vv       1Q GAIN CNV 1Q GAIN WILD-TYPE
  CLUS_1          17                30
  CLUS_2          11                30
  CLUS_3          20                18

Clustering(3) Variable = 2p gain
D3V1, multiclass
        clus
vv       2P GAIN CNV 2P GAIN WILD-TYPE
  CLUS_1          14                40
  CLUS_2           6                37
  CLUS_3           3                55
D3V2, multiclass
D3V3, multiclass
D3V4, multiclass
        clus
vv       2P GAIN CNV 2P GAIN WILD-TYPE
  CLUS_1          11                36
  CLUS_2           8                65
  CLUS_3           4                16
D3V5, multiclass
        clus
vv       2P GAIN CNV 2P GAIN WILD-TYPE
  CLUS_1           4                29
  CLUS_2           5                38
  CLUS_3           1                12
  CLUS_4           8                29
D3V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  2P GAIN CNV          9    9
  2P GAIN WILD-TYPE   79   29
        clus
vv       2P GAIN CNV 2P GAIN WILD-TYPE
  CLUS_1           9                79
  CLUS_2           9                29
D3V7, multiclass
        clus
vv       2P GAIN CNV 2P GAIN WILD-TYPE
  CLUS_1           7                43
  CLUS_2           3                31
  CLUS_3           8                34
D3V8, multiclass
        clus
vv       2P GAIN CNV 2P GAIN WILD-TYPE
  CLUS_1           4                43
  CLUS_2           5                36
  CLUS_3           9                29

Clustering(4) Variable = 2q gain
D4V1, multiclass
        clus
vv       2Q GAIN CNV 2Q GAIN WILD-TYPE
  CLUS_1           4                50
  CLUS_2           2                41
  CLUS_3           0                58
D4V2, multiclass
D4V3, multiclass
D4V4, multiclass
        clus
vv       2Q GAIN CNV 2Q GAIN WILD-TYPE
  CLUS_1           4                43
  CLUS_2           0                73
  CLUS_3           2                18
D4V5, multiclass
        clus
vv       2Q GAIN CNV 2Q GAIN WILD-TYPE
  CLUS_1           1                32
  CLUS_2           2                41
  CLUS_3           0                13
  CLUS_4           2                35
D4V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  2Q GAIN CNV          3    2
  2Q GAIN WILD-TYPE   85   36
        clus
vv       2Q GAIN CNV 2Q GAIN WILD-TYPE
  CLUS_1           3                85
  CLUS_2           2                36
D4V7, multiclass
        clus
vv       2Q GAIN CNV 2Q GAIN WILD-TYPE
  CLUS_1           2                48
  CLUS_2           1                33
  CLUS_3           2                40
D4V8, multiclass
        clus
vv       2Q GAIN CNV 2Q GAIN WILD-TYPE
  CLUS_1           2                45
  CLUS_2           1                40
  CLUS_3           2                36

Clustering(5) Variable = 3p gain
D5V1, multiclass
        clus
vv       3P GAIN CNV 3P GAIN WILD-TYPE
  CLUS_1           8                46
  CLUS_2           5                38
  CLUS_3           8                50
D5V2, multiclass
D5V3, multiclass
D5V4, multiclass
        clus
vv       3P GAIN CNV 3P GAIN WILD-TYPE
  CLUS_1           5                42
  CLUS_2           7                66
  CLUS_3           6                14
D5V5, multiclass
        clus
vv       3P GAIN CNV 3P GAIN WILD-TYPE
  CLUS_1           6                27
  CLUS_2           5                38
  CLUS_3           4                 9
  CLUS_4           5                32
D5V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  3P GAIN CNV         14    6
  3P GAIN WILD-TYPE   74   32
        clus
vv       3P GAIN CNV 3P GAIN WILD-TYPE
  CLUS_1          14                74
  CLUS_2           6                32
D5V7, multiclass
        clus
vv       3P GAIN CNV 3P GAIN WILD-TYPE
  CLUS_1           7                43
  CLUS_2           7                27
  CLUS_3           6                36
D5V8, multiclass
        clus
vv       3P GAIN CNV 3P GAIN WILD-TYPE
  CLUS_1          11                36
  CLUS_2           3                38
  CLUS_3           6                32

Clustering(6) Variable = 3q gain
D6V1, multiclass
        clus
vv       3Q GAIN CNV 3Q GAIN WILD-TYPE
  CLUS_1          38                16
  CLUS_2          15                28
  CLUS_3          23                35
D6V2, multiclass
D6V3, multiclass
D6V4, multiclass
        clus
vv       3Q GAIN CNV 3Q GAIN WILD-TYPE
  CLUS_1          14                33
  CLUS_2          41                32
  CLUS_3          16                 4
D6V5, multiclass
        clus
vv       3Q GAIN CNV 3Q GAIN WILD-TYPE
  CLUS_1          23                10
  CLUS_2          16                27
  CLUS_3           6                 7
  CLUS_4          15                22
D6V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  3Q GAIN CNV         45   15
  3Q GAIN WILD-TYPE   43   23
        clus
vv       3Q GAIN CNV 3Q GAIN WILD-TYPE
  CLUS_1          45                43
  CLUS_2          15                23
D6V7, multiclass
        clus
vv       3Q GAIN CNV 3Q GAIN WILD-TYPE
  CLUS_1          22                28
  CLUS_2          21                13
  CLUS_3          17                25
D6V8, multiclass
        clus
vv       3Q GAIN CNV 3Q GAIN WILD-TYPE
  CLUS_1          35                12
  CLUS_2           9                32
  CLUS_3          16                22

Clustering(7) Variable = 4q gain
D7V1, multiclass
        clus
vv       4Q GAIN CNV 4Q GAIN WILD-TYPE
  CLUS_1           1                53
  CLUS_2           2                41
  CLUS_3           0                58
D7V2, multiclass
D7V3, multiclass
D7V4, multiclass
        clus
vv       4Q GAIN CNV 4Q GAIN WILD-TYPE
  CLUS_1           2                45
  CLUS_2           0                73
  CLUS_3           1                19
D7V5, multiclass
        clus
vv       4Q GAIN CNV 4Q GAIN WILD-TYPE
  CLUS_1           1                32
  CLUS_2           0                43
  CLUS_3           0                13
  CLUS_4           2                35
D7V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  4Q GAIN CNV          1    2
  4Q GAIN WILD-TYPE   87   36
        clus
vv       4Q GAIN CNV 4Q GAIN WILD-TYPE
  CLUS_1           1                87
  CLUS_2           2                36
D7V7, multiclass
        clus
vv       4Q GAIN CNV 4Q GAIN WILD-TYPE
  CLUS_1           0                50
  CLUS_2           1                33
  CLUS_3           2                40
D7V8, multiclass
        clus
vv       4Q GAIN CNV 4Q GAIN WILD-TYPE
  CLUS_1           1                46
  CLUS_2           0                41
  CLUS_3           2                36

Clustering(8) Variable = 5p gain
D8V1, multiclass
        clus
vv       5P GAIN CNV 5P GAIN WILD-TYPE
  CLUS_1          21                33
  CLUS_2          20                23
  CLUS_3          10                48
D8V2, multiclass
D8V3, multiclass
D8V4, multiclass
        clus
vv       5P GAIN CNV 5P GAIN WILD-TYPE
  CLUS_1          17                30
  CLUS_2          24                49
  CLUS_3           7                13
D8V5, multiclass
        clus
vv       5P GAIN CNV 5P GAIN WILD-TYPE
  CLUS_1          11                22
  CLUS_2          16                27
  CLUS_3           3                10
  CLUS_4          13                24
D8V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  5P GAIN CNV         28   15
  5P GAIN WILD-TYPE   60   23
        clus
vv       5P GAIN CNV 5P GAIN WILD-TYPE
  CLUS_1          28                60
  CLUS_2          15                23
D8V7, multiclass
        clus
vv       5P GAIN CNV 5P GAIN WILD-TYPE
  CLUS_1          18                32
  CLUS_2           9                25
  CLUS_3          16                26
D8V8, multiclass
        clus
vv       5P GAIN CNV 5P GAIN WILD-TYPE
  CLUS_1          10                37
  CLUS_2          18                23
  CLUS_3          15                23

Clustering(9) Variable = 5q gain
D9V1, multiclass
        clus
vv       5Q GAIN CNV 5Q GAIN WILD-TYPE
  CLUS_1           5                49
  CLUS_2           5                38
  CLUS_3           5                53
D9V2, multiclass
D9V3, multiclass
D9V4, multiclass
        clus
vv       5Q GAIN CNV 5Q GAIN WILD-TYPE
  CLUS_1           4                43
  CLUS_2           9                64
  CLUS_3           2                18
D9V5, multiclass
        clus
vv       5Q GAIN CNV 5Q GAIN WILD-TYPE
  CLUS_1           2                31
  CLUS_2           5                38
  CLUS_3           2                11
  CLUS_4           4                33
D9V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  5Q GAIN CNV          8    5
  5Q GAIN WILD-TYPE   80   33
        clus
vv       5Q GAIN CNV 5Q GAIN WILD-TYPE
  CLUS_1           8                80
  CLUS_2           5                33
D9V7, multiclass
        clus
vv       5Q GAIN CNV 5Q GAIN WILD-TYPE
  CLUS_1           6                44
  CLUS_2           2                32
  CLUS_3           5                37
D9V8, multiclass
        clus
vv       5Q GAIN CNV 5Q GAIN WILD-TYPE
  CLUS_1           4                43
  CLUS_2           4                37
  CLUS_3           5                33

Clustering(10) Variable = 6p gain
D10V1, multiclass
        clus
vv       6P GAIN CNV 6P GAIN WILD-TYPE
  CLUS_1           7                47
  CLUS_2           9                34
  CLUS_3           5                53
D10V2, multiclass
D10V3, multiclass
D10V4, multiclass
        clus
vv       6P GAIN CNV 6P GAIN WILD-TYPE
  CLUS_1          11                36
  CLUS_2           5                68
  CLUS_3           2                18
D10V5, multiclass
        clus
vv       6P GAIN CNV 6P GAIN WILD-TYPE
  CLUS_1           3                30
  CLUS_2           5                38
  CLUS_3           3                10
  CLUS_4           8                29
D10V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  6P GAIN CNV         11    8
  6P GAIN WILD-TYPE   77   30
        clus
vv       6P GAIN CNV 6P GAIN WILD-TYPE
  CLUS_1          11                77
  CLUS_2           8                30
D10V7, multiclass
        clus
vv       6P GAIN CNV 6P GAIN WILD-TYPE
  CLUS_1           6                44
  CLUS_2           3                31
  CLUS_3          10                32
D10V8, multiclass
        clus
vv       6P GAIN CNV 6P GAIN WILD-TYPE
  CLUS_1           2                45
  CLUS_2           7                34
  CLUS_3          10                28

Clustering(11) Variable = 6q gain
D11V1, multiclass
        clus
vv       6Q GAIN CNV 6Q GAIN WILD-TYPE
  CLUS_1           4                50
  CLUS_2           4                39
  CLUS_3           2                56
D11V2, multiclass
D11V3, multiclass
D11V4, multiclass
        clus
vv       6Q GAIN CNV 6Q GAIN WILD-TYPE
  CLUS_1           6                41
  CLUS_2           3                70
  CLUS_3           1                19
D11V5, multiclass
        clus
vv       6Q GAIN CNV 6Q GAIN WILD-TYPE
  CLUS_1           2                31
  CLUS_2           1                42
  CLUS_3           2                11
  CLUS_4           5                32
D11V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  6Q GAIN CNV          4    6
  6Q GAIN WILD-TYPE   84   32
        clus
vv       6Q GAIN CNV 6Q GAIN WILD-TYPE
  CLUS_1           4                84
  CLUS_2           6                32
D11V7, multiclass
        clus
vv       6Q GAIN CNV 6Q GAIN WILD-TYPE
  CLUS_1           2                48
  CLUS_2           3                31
  CLUS_3           5                37
D11V8, multiclass
        clus
vv       6Q GAIN CNV 6Q GAIN WILD-TYPE
  CLUS_1           1                46
  CLUS_2           2                39
  CLUS_3           7                31

Clustering(12) Variable = 7p gain
D12V1, multiclass
        clus
vv       7P GAIN CNV 7P GAIN WILD-TYPE
  CLUS_1           3                51
  CLUS_2           3                40
  CLUS_3           3                55
D12V2, multiclass
D12V3, multiclass
D12V4, multiclass
        clus
vv       7P GAIN CNV 7P GAIN WILD-TYPE
  CLUS_1           1                46
  CLUS_2           8                65
  CLUS_3           0                20
D12V5, multiclass
        clus
vv       7P GAIN CNV 7P GAIN WILD-TYPE
  CLUS_1           1                32
  CLUS_2           5                38
  CLUS_3           0                13
  CLUS_4           1                36
D12V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  7P GAIN CNV          7    0
  7P GAIN WILD-TYPE   81   38
        clus
vv       7P GAIN CNV 7P GAIN WILD-TYPE
  CLUS_1           7                81
  CLUS_2           0                38
D12V7, multiclass
        clus
vv       7P GAIN CNV 7P GAIN WILD-TYPE
  CLUS_1           7                43
  CLUS_2           0                34
  CLUS_3           0                42
D12V8, multiclass
        clus
vv       7P GAIN CNV 7P GAIN WILD-TYPE
  CLUS_1           3                44
  CLUS_2           4                37
  CLUS_3           0                38

Clustering(13) Variable = 7q gain
D13V1, multiclass
        clus
vv       7Q GAIN CNV 7Q GAIN WILD-TYPE
  CLUS_1           7                47
  CLUS_2           3                40
  CLUS_3           2                56
D13V2, multiclass
D13V3, multiclass
D13V4, multiclass
        clus
vv       7Q GAIN CNV 7Q GAIN WILD-TYPE
  CLUS_1           3                44
  CLUS_2           6                67
  CLUS_3           3                17
D13V5, multiclass
        clus
vv       7Q GAIN CNV 7Q GAIN WILD-TYPE
  CLUS_1           2                31
  CLUS_2           6                37
  CLUS_3           0                13
  CLUS_4           3                34
D13V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  7Q GAIN CNV          8    3
  7Q GAIN WILD-TYPE   80   35
        clus
vv       7Q GAIN CNV 7Q GAIN WILD-TYPE
  CLUS_1           8                80
  CLUS_2           3                35
D13V7, multiclass
        clus
vv       7Q GAIN CNV 7Q GAIN WILD-TYPE
  CLUS_1           8                42
  CLUS_2           1                33
  CLUS_3           2                40
D13V8, multiclass
        clus
vv       7Q GAIN CNV 7Q GAIN WILD-TYPE
  CLUS_1           4                43
  CLUS_2           4                37
  CLUS_3           3                35

Clustering(14) Variable = 8p gain
D14V1, multiclass
        clus
vv       8P GAIN CNV 8P GAIN WILD-TYPE
  CLUS_1           7                47
  CLUS_2           2                41
  CLUS_3           5                53
D14V2, multiclass
D14V3, multiclass
D14V4, multiclass
        clus
vv       8P GAIN CNV 8P GAIN WILD-TYPE
  CLUS_1           1                46
  CLUS_2          10                63
  CLUS_3           3                17
D14V5, multiclass
        clus
vv       8P GAIN CNV 8P GAIN WILD-TYPE
  CLUS_1           5                28
  CLUS_2           4                39
  CLUS_3           0                13
  CLUS_4           2                35
D14V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  8P GAIN CNV          8    3
  8P GAIN WILD-TYPE   80   35
        clus
vv       8P GAIN CNV 8P GAIN WILD-TYPE
  CLUS_1           8                80
  CLUS_2           3                35
D14V7, multiclass
        clus
vv       8P GAIN CNV 8P GAIN WILD-TYPE
  CLUS_1           7                43
  CLUS_2           3                31
  CLUS_3           1                41
D14V8, multiclass
        clus
vv       8P GAIN CNV 8P GAIN WILD-TYPE
  CLUS_1           5                42
  CLUS_2           3                38
  CLUS_3           3                35

Clustering(15) Variable = 8q gain
D15V1, multiclass
        clus
vv       8Q GAIN CNV 8Q GAIN WILD-TYPE
  CLUS_1          12                42
  CLUS_2           9                34
  CLUS_3           8                50
D15V2, multiclass
D15V3, multiclass
D15V4, multiclass
        clus
vv       8Q GAIN CNV 8Q GAIN WILD-TYPE
  CLUS_1           7                40
  CLUS_2          17                56
  CLUS_3           4                16
D15V5, multiclass
        clus
vv       8Q GAIN CNV 8Q GAIN WILD-TYPE
  CLUS_1           7                26
  CLUS_2          12                31
  CLUS_3           0                13
  CLUS_4           4                33
D15V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  8Q GAIN CNV         19    4
  8Q GAIN WILD-TYPE   69   34
        clus
vv       8Q GAIN CNV 8Q GAIN WILD-TYPE
  CLUS_1          19                69
  CLUS_2           4                34
D15V7, multiclass
        clus
vv       8Q GAIN CNV 8Q GAIN WILD-TYPE
  CLUS_1          15                35
  CLUS_2           5                29
  CLUS_3           3                39
D15V8, multiclass
        clus
vv       8Q GAIN CNV 8Q GAIN WILD-TYPE
  CLUS_1           7                40
  CLUS_2          12                29
  CLUS_3           4                34

Clustering(16) Variable = 9p gain
D16V1, multiclass
        clus
vv       9P GAIN CNV 9P GAIN WILD-TYPE
  CLUS_1           5                49
  CLUS_2           7                36
  CLUS_3           6                52
D16V2, multiclass
D16V3, multiclass
D16V4, multiclass
        clus
vv       9P GAIN CNV 9P GAIN WILD-TYPE
  CLUS_1           8                39
  CLUS_2           4                69
  CLUS_3           6                14
D16V5, multiclass
        clus
vv       9P GAIN CNV 9P GAIN WILD-TYPE
  CLUS_1           1                32
  CLUS_2           5                38
  CLUS_3           2                11
  CLUS_4           4                33
D16V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  9P GAIN CNV          7    5
  9P GAIN WILD-TYPE   81   33
        clus
vv       9P GAIN CNV 9P GAIN WILD-TYPE
  CLUS_1           7                81
  CLUS_2           5                33
D16V7, multiclass
        clus
vv       9P GAIN CNV 9P GAIN WILD-TYPE
  CLUS_1           5                45
  CLUS_2           2                32
  CLUS_3           5                37
D16V8, multiclass
        clus
vv       9P GAIN CNV 9P GAIN WILD-TYPE
  CLUS_1           4                43
  CLUS_2           3                38
  CLUS_3           5                33

Clustering(17) Variable = 9q gain
D17V1, multiclass
        clus
vv       9Q GAIN CNV 9Q GAIN WILD-TYPE
  CLUS_1           4                50
  CLUS_2           7                36
  CLUS_3           6                52
D17V2, multiclass
D17V3, multiclass
D17V4, multiclass
        clus
vv       9Q GAIN CNV 9Q GAIN WILD-TYPE
  CLUS_1           6                41
  CLUS_2           4                69
  CLUS_3           7                13
D17V5, multiclass
        clus
vv       9Q GAIN CNV 9Q GAIN WILD-TYPE
  CLUS_1           1                32
  CLUS_2           6                37
  CLUS_3           3                10
  CLUS_4           2                35
D17V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  9Q GAIN CNV          9    3
  9Q GAIN WILD-TYPE   79   35
        clus
vv       9Q GAIN CNV 9Q GAIN WILD-TYPE
  CLUS_1           9                79
  CLUS_2           3                35
D17V7, multiclass
        clus
vv       9Q GAIN CNV 9Q GAIN WILD-TYPE
  CLUS_1           6                44
  CLUS_2           3                31
  CLUS_3           3                39
D17V8, multiclass
        clus
vv       9Q GAIN CNV 9Q GAIN WILD-TYPE
  CLUS_1           6                41
  CLUS_2           3                38
  CLUS_3           3                35

Clustering(18) Variable = 10p gain
D18V1, multiclass
        clus
vv       10P GAIN CNV 10P GAIN WILD-TYPE
  CLUS_1            5                 49
  CLUS_2            0                 43
  CLUS_3            3                 55
D18V2, multiclass
D18V3, multiclass
D18V4, multiclass
        clus
vv       10P GAIN CNV 10P GAIN WILD-TYPE
  CLUS_1            2                 45
  CLUS_2            4                 69
  CLUS_3            1                 19
D18V5, multiclass
        clus
vv       10P GAIN CNV 10P GAIN WILD-TYPE
  CLUS_1            4                 29
  CLUS_2            1                 42
  CLUS_3            0                 13
  CLUS_4            2                 35
D18V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  10P GAIN CNV          5    2
  10P GAIN WILD-TYPE   83   36
        clus
vv       10P GAIN CNV 10P GAIN WILD-TYPE
  CLUS_1            5                 83
  CLUS_2            2                 36
D18V7, multiclass
        clus
vv       10P GAIN CNV 10P GAIN WILD-TYPE
  CLUS_1            2                 48
  CLUS_2            3                 31
  CLUS_3            2                 40
D18V8, multiclass
        clus
vv       10P GAIN CNV 10P GAIN WILD-TYPE
  CLUS_1            4                 43
  CLUS_2            1                 40
  CLUS_3            2                 36

Clustering(19) Variable = 10q gain
D19V1, multiclass
        clus
vv       10Q GAIN CNV 10Q GAIN WILD-TYPE
  CLUS_1            0                 54
  CLUS_2            0                 43
  CLUS_3            3                 55
D19V2, multiclass
D19V3, multiclass
D19V4, multiclass
        clus
vv       10Q GAIN CNV 10Q GAIN WILD-TYPE
  CLUS_1            2                 45
  CLUS_2            1                 72
  CLUS_3            0                 20
D19V5, multiclass
        clus
vv       10Q GAIN CNV 10Q GAIN WILD-TYPE
  CLUS_1            1                 32
  CLUS_2            0                 43
  CLUS_3            0                 13
  CLUS_4            2                 35
D19V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  10Q GAIN CNV          1    2
  10Q GAIN WILD-TYPE   87   36
        clus
vv       10Q GAIN CNV 10Q GAIN WILD-TYPE
  CLUS_1            1                 87
  CLUS_2            2                 36
D19V7, multiclass
        clus
vv       10Q GAIN CNV 10Q GAIN WILD-TYPE
  CLUS_1            1                 49
  CLUS_2            0                 34
  CLUS_3            2                 40
D19V8, multiclass
        clus
vv       10Q GAIN CNV 10Q GAIN WILD-TYPE
  CLUS_1            1                 46
  CLUS_2            0                 41
  CLUS_3            2                 36

Clustering(20) Variable = 12p gain
D20V1, multiclass
        clus
vv       12P GAIN CNV 12P GAIN WILD-TYPE
  CLUS_1           11                 43
  CLUS_2            2                 41
  CLUS_3            5                 53
D20V2, multiclass
D20V3, multiclass
D20V4, multiclass
        clus
vv       12P GAIN CNV 12P GAIN WILD-TYPE
  CLUS_1            9                 38
  CLUS_2            3                 70
  CLUS_3            6                 14
D20V5, multiclass
        clus
vv       12P GAIN CNV 12P GAIN WILD-TYPE
  CLUS_1            2                 31
  CLUS_2            3                 40
  CLUS_3            3                 10
  CLUS_4            5                 32
D20V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  12P GAIN CNV          7    6
  12P GAIN WILD-TYPE   81   32
        clus
vv       12P GAIN CNV 12P GAIN WILD-TYPE
  CLUS_1            7                 81
  CLUS_2            6                 32
D20V7, multiclass
        clus
vv       12P GAIN CNV 12P GAIN WILD-TYPE
  CLUS_1            3                 47
  CLUS_2            4                 30
  CLUS_3            6                 36
D20V8, multiclass
        clus
vv       12P GAIN CNV 12P GAIN WILD-TYPE
  CLUS_1            4                 43
  CLUS_2            3                 38
  CLUS_3            6                 32

Clustering(21) Variable = 12q gain
D21V1, multiclass
        clus
vv       12Q GAIN CNV 12Q GAIN WILD-TYPE
  CLUS_1           11                 43
  CLUS_2            2                 41
  CLUS_3            3                 55
D21V2, multiclass
D21V3, multiclass
D21V4, multiclass
        clus
vv       12Q GAIN CNV 12Q GAIN WILD-TYPE
  CLUS_1            6                 41
  CLUS_2            4                 69
  CLUS_3            6                 14
D21V5, multiclass
        clus
vv       12Q GAIN CNV 12Q GAIN WILD-TYPE
  CLUS_1            2                 31
  CLUS_2            3                 40
  CLUS_3            3                 10
  CLUS_4            2                 35
D21V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  12Q GAIN CNV          7    3
  12Q GAIN WILD-TYPE   81   35
        clus
vv       12Q GAIN CNV 12Q GAIN WILD-TYPE
  CLUS_1            7                 81
  CLUS_2            3                 35
D21V7, multiclass
        clus
vv       12Q GAIN CNV 12Q GAIN WILD-TYPE
  CLUS_1            3                 47
  CLUS_2            4                 30
  CLUS_3            3                 39
D21V8, multiclass
        clus
vv       12Q GAIN CNV 12Q GAIN WILD-TYPE
  CLUS_1            4                 43
  CLUS_2            3                 38
  CLUS_3            3                 35

Clustering(22) Variable = 13q gain
D22V1, multiclass
        clus
vv       13Q GAIN CNV 13Q GAIN WILD-TYPE
  CLUS_1            2                 52
  CLUS_2            4                 39
  CLUS_3            2                 56
D22V2, multiclass
D22V3, multiclass
D22V4, multiclass
        clus
vv       13Q GAIN CNV 13Q GAIN WILD-TYPE
  CLUS_1            4                 43
  CLUS_2            3                 70
  CLUS_3            1                 19
D22V5, multiclass
        clus
vv       13Q GAIN CNV 13Q GAIN WILD-TYPE
  CLUS_1            0                 33
  CLUS_2            3                 40
  CLUS_3            1                 12
  CLUS_4            2                 35
D22V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  13Q GAIN CNV          3    3
  13Q GAIN WILD-TYPE   85   35
        clus
vv       13Q GAIN CNV 13Q GAIN WILD-TYPE
  CLUS_1            3                 85
  CLUS_2            3                 35
D22V7, multiclass
        clus
vv       13Q GAIN CNV 13Q GAIN WILD-TYPE
  CLUS_1            2                 48
  CLUS_2            1                 33
  CLUS_3            3                 39
D22V8, multiclass
        clus
vv       13Q GAIN CNV 13Q GAIN WILD-TYPE
  CLUS_1            1                 46
  CLUS_2            2                 39
  CLUS_3            3                 35

Clustering(23) Variable = 14q gain
D23V1, multiclass
        clus
vv       14Q GAIN CNV 14Q GAIN WILD-TYPE
  CLUS_1            6                 48
  CLUS_2            8                 35
  CLUS_3            1                 57
D23V2, multiclass
D23V3, multiclass
D23V4, multiclass
        clus
vv       14Q GAIN CNV 14Q GAIN WILD-TYPE
  CLUS_1            8                 39
  CLUS_2            6                 67
  CLUS_3            1                 19
D23V5, multiclass
        clus
vv       14Q GAIN CNV 14Q GAIN WILD-TYPE
  CLUS_1            1                 32
  CLUS_2            5                 38
  CLUS_3            0                 13
  CLUS_4            4                 33
D23V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  14Q GAIN CNV          6    4
  14Q GAIN WILD-TYPE   82   34
        clus
vv       14Q GAIN CNV 14Q GAIN WILD-TYPE
  CLUS_1            6                 82
  CLUS_2            4                 34
D23V7, multiclass
        clus
vv       14Q GAIN CNV 14Q GAIN WILD-TYPE
  CLUS_1            6                 44
  CLUS_2            0                 34
  CLUS_3            4                 38
D23V8, multiclass
        clus
vv       14Q GAIN CNV 14Q GAIN WILD-TYPE
  CLUS_1            1                 46
  CLUS_2            5                 36
  CLUS_3            4                 34

Clustering(24) Variable = 15q gain
D24V1, multiclass
        clus
vv       15Q GAIN CNV 15Q GAIN WILD-TYPE
  CLUS_1           10                 44
  CLUS_2            5                 38
  CLUS_3            3                 55
D24V2, multiclass
D24V3, multiclass
D24V4, multiclass
        clus
vv       15Q GAIN CNV 15Q GAIN WILD-TYPE
  CLUS_1            5                 42
  CLUS_2            8                 65
  CLUS_3            3                 17
D24V5, multiclass
        clus
vv       15Q GAIN CNV 15Q GAIN WILD-TYPE
  CLUS_1            4                 29
  CLUS_2            4                 39
  CLUS_3            2                 11
  CLUS_4            3                 34
D24V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  15Q GAIN CNV          9    4
  15Q GAIN WILD-TYPE   79   34
        clus
vv       15Q GAIN CNV 15Q GAIN WILD-TYPE
  CLUS_1            9                 79
  CLUS_2            4                 34
D24V7, multiclass
        clus
vv       15Q GAIN CNV 15Q GAIN WILD-TYPE
  CLUS_1            5                 45
  CLUS_2            4                 30
  CLUS_3            4                 38
D24V8, multiclass
        clus
vv       15Q GAIN CNV 15Q GAIN WILD-TYPE
  CLUS_1            4                 43
  CLUS_2            5                 36
  CLUS_3            4                 34

Clustering(25) Variable = 16p gain
D25V1, multiclass
        clus
vv       16P GAIN CNV 16P GAIN WILD-TYPE
  CLUS_1           11                 43
  CLUS_2            3                 40
  CLUS_3            3                 55
D25V2, multiclass
D25V3, multiclass
D25V4, multiclass
        clus
vv       16P GAIN CNV 16P GAIN WILD-TYPE
  CLUS_1            7                 40
  CLUS_2            5                 68
  CLUS_3            2                 18
D25V5, multiclass
        clus
vv       16P GAIN CNV 16P GAIN WILD-TYPE
  CLUS_1            2                 31
  CLUS_2            5                 38
  CLUS_3            0                 13
  CLUS_4            6                 31
D25V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  16P GAIN CNV          6    7
  16P GAIN WILD-TYPE   82   31
        clus
vv       16P GAIN CNV 16P GAIN WILD-TYPE
  CLUS_1            6                 82
  CLUS_2            7                 31
D25V7, multiclass
        clus
vv       16P GAIN CNV 16P GAIN WILD-TYPE
  CLUS_1            5                 45
  CLUS_2            2                 32
  CLUS_3            6                 36
D25V8, multiclass
        clus
vv       16P GAIN CNV 16P GAIN WILD-TYPE
  CLUS_1            3                 44
  CLUS_2            3                 38
  CLUS_3            7                 31

Clustering(26) Variable = 16q gain
D26V1, multiclass
        clus
vv       16Q GAIN CNV 16Q GAIN WILD-TYPE
  CLUS_1            4                 50
  CLUS_2            3                 40
  CLUS_3            3                 55
D26V2, multiclass
D26V3, multiclass
D26V4, multiclass
        clus
vv       16Q GAIN CNV 16Q GAIN WILD-TYPE
  CLUS_1            5                 42
  CLUS_2            2                 71
  CLUS_3            1                 19
D26V5, multiclass
        clus
vv       16Q GAIN CNV 16Q GAIN WILD-TYPE
  CLUS_1            0                 33
  CLUS_2            5                 38
  CLUS_3            0                 13
  CLUS_4            3                 34
D26V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  16Q GAIN CNV          4    4
  16Q GAIN WILD-TYPE   84   34
        clus
vv       16Q GAIN CNV 16Q GAIN WILD-TYPE
  CLUS_1            4                 84
  CLUS_2            4                 34
D26V7, multiclass
        clus
vv       16Q GAIN CNV 16Q GAIN WILD-TYPE
  CLUS_1            5                 45
  CLUS_2            0                 34
  CLUS_3            3                 39
D26V8, multiclass
        clus
vv       16Q GAIN CNV 16Q GAIN WILD-TYPE
  CLUS_1            1                 46
  CLUS_2            3                 38
  CLUS_3            4                 34

Clustering(27) Variable = 17p gain
D27V1, multiclass
        clus
vv       17P GAIN CNV 17P GAIN WILD-TYPE
  CLUS_1            4                 50
  CLUS_2            2                 41
  CLUS_3            1                 57
D27V2, multiclass
D27V3, multiclass
D27V4, multiclass
        clus
vv       17P GAIN CNV 17P GAIN WILD-TYPE
  CLUS_1            3                 44
  CLUS_2            2                 71
  CLUS_3            2                 18
D27V5, multiclass
        clus
vv       17P GAIN CNV 17P GAIN WILD-TYPE
  CLUS_1            0                 33
  CLUS_2            2                 41
  CLUS_3            0                 13
  CLUS_4            3                 34
D27V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  17P GAIN CNV          1    4
  17P GAIN WILD-TYPE   87   34
        clus
vv       17P GAIN CNV 17P GAIN WILD-TYPE
  CLUS_1            1                 87
  CLUS_2            4                 34
D27V7, multiclass
        clus
vv       17P GAIN CNV 17P GAIN WILD-TYPE
  CLUS_1            2                 48
  CLUS_2            0                 34
  CLUS_3            3                 39
D27V8, multiclass
        clus
vv       17P GAIN CNV 17P GAIN WILD-TYPE
  CLUS_1            1                 46
  CLUS_2            0                 41
  CLUS_3            4                 34

Clustering(28) Variable = 17q gain
D28V1, multiclass
        clus
vv       17Q GAIN CNV 17Q GAIN WILD-TYPE
  CLUS_1            9                 45
  CLUS_2            6                 37
  CLUS_3            2                 56
D28V2, multiclass
D28V3, multiclass
D28V4, multiclass
        clus
vv       17Q GAIN CNV 17Q GAIN WILD-TYPE
  CLUS_1            8                 39
  CLUS_2            3                 70
  CLUS_3            6                 14
D28V5, multiclass
        clus
vv       17Q GAIN CNV 17Q GAIN WILD-TYPE
  CLUS_1            2                 31
  CLUS_2            3                 40
  CLUS_3            2                 11
  CLUS_4            6                 31
D28V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  17Q GAIN CNV          5    8
  17Q GAIN WILD-TYPE   83   30
        clus
vv       17Q GAIN CNV 17Q GAIN WILD-TYPE
  CLUS_1            5                 83
  CLUS_2            8                 30
D28V7, multiclass
        clus
vv       17Q GAIN CNV 17Q GAIN WILD-TYPE
  CLUS_1            2                 48
  CLUS_2            3                 31
  CLUS_3            8                 34
D28V8, multiclass
        clus
vv       17Q GAIN CNV 17Q GAIN WILD-TYPE
  CLUS_1            5                 42
  CLUS_2            0                 41
  CLUS_3            8                 30

Clustering(29) Variable = 18p gain
D29V1, multiclass
        clus
vv       18P GAIN CNV 18P GAIN WILD-TYPE
  CLUS_1            8                 46
  CLUS_2            3                 40
  CLUS_3            5                 53
D29V2, multiclass
D29V3, multiclass
D29V4, multiclass
        clus
vv       18P GAIN CNV 18P GAIN WILD-TYPE
  CLUS_1            3                 44
  CLUS_2            7                 66
  CLUS_3            5                 15
D29V5, multiclass
        clus
vv       18P GAIN CNV 18P GAIN WILD-TYPE
  CLUS_1            3                 30
  CLUS_2            6                 37
  CLUS_3            2                 11
  CLUS_4            1                 36
D29V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  18P GAIN CNV         10    2
  18P GAIN WILD-TYPE   78   36
        clus
vv       18P GAIN CNV 18P GAIN WILD-TYPE
  CLUS_1           10                 78
  CLUS_2            2                 36
D29V7, multiclass
        clus
vv       18P GAIN CNV 18P GAIN WILD-TYPE
  CLUS_1            6                 44
  CLUS_2            5                 29
  CLUS_3            1                 41
D29V8, multiclass
        clus
vv       18P GAIN CNV 18P GAIN WILD-TYPE
  CLUS_1            8                 39
  CLUS_2            2                 39
  CLUS_3            2                 36

Clustering(30) Variable = 18q gain
D30V1, multiclass
        clus
vv       18Q GAIN CNV 18Q GAIN WILD-TYPE
  CLUS_1            4                 50
  CLUS_2            1                 42
  CLUS_3            3                 55
D30V2, multiclass
D30V3, multiclass
D30V4, multiclass
        clus
vv       18Q GAIN CNV 18Q GAIN WILD-TYPE
  CLUS_1            3                 44
  CLUS_2            1                 72
  CLUS_3            3                 17
D30V5, multiclass
        clus
vv       18Q GAIN CNV 18Q GAIN WILD-TYPE
  CLUS_1            2                 31
  CLUS_2            2                 41
  CLUS_3            2                 11
  CLUS_4            1                 36
D30V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  18Q GAIN CNV          5    2
  18Q GAIN WILD-TYPE   83   36
        clus
vv       18Q GAIN CNV 18Q GAIN WILD-TYPE
  CLUS_1            5                 83
  CLUS_2            2                 36
D30V7, multiclass
        clus
vv       18Q GAIN CNV 18Q GAIN WILD-TYPE
  CLUS_1            2                 48
  CLUS_2            4                 30
  CLUS_3            1                 41
D30V8, multiclass
        clus
vv       18Q GAIN CNV 18Q GAIN WILD-TYPE
  CLUS_1            4                 43
  CLUS_2            1                 40
  CLUS_3            2                 36

Clustering(31) Variable = 19p gain
D31V1, multiclass
        clus
vv       19P GAIN CNV 19P GAIN WILD-TYPE
  CLUS_1            6                 48
  CLUS_2            5                 38
  CLUS_3            2                 56
D31V2, multiclass
D31V3, multiclass
D31V4, multiclass
        clus
vv       19P GAIN CNV 19P GAIN WILD-TYPE
  CLUS_1            7                 40
  CLUS_2            4                 69
  CLUS_3            1                 19
D31V5, multiclass
        clus
vv       19P GAIN CNV 19P GAIN WILD-TYPE
  CLUS_1            1                 32
  CLUS_2            3                 40
  CLUS_3            1                 12
  CLUS_4            5                 32
D31V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  19P GAIN CNV          7    3
  19P GAIN WILD-TYPE   81   35
        clus
vv       19P GAIN CNV 19P GAIN WILD-TYPE
  CLUS_1            7                 81
  CLUS_2            3                 35
D31V7, multiclass
        clus
vv       19P GAIN CNV 19P GAIN WILD-TYPE
  CLUS_1            5                 45
  CLUS_2            1                 33
  CLUS_3            4                 38
D31V8, multiclass
        clus
vv       19P GAIN CNV 19P GAIN WILD-TYPE
  CLUS_1            3                 44
  CLUS_2            3                 38
  CLUS_3            4                 34

Clustering(32) Variable = 19q gain
D32V1, multiclass
        clus
vv       19Q GAIN CNV 19Q GAIN WILD-TYPE
  CLUS_1           11                 43
  CLUS_2           10                 33
  CLUS_3            6                 52
D32V2, multiclass
D32V3, multiclass
D32V4, multiclass
        clus
vv       19Q GAIN CNV 19Q GAIN WILD-TYPE
  CLUS_1           13                 34
  CLUS_2           10                 63
  CLUS_3            2                 18
D32V5, multiclass
        clus
vv       19Q GAIN CNV 19Q GAIN WILD-TYPE
  CLUS_1            3                 30
  CLUS_2            8                 35
  CLUS_3            1                 12
  CLUS_4           11                 26
D32V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  19Q GAIN CNV         13   10
  19Q GAIN WILD-TYPE   75   28
        clus
vv       19Q GAIN CNV 19Q GAIN WILD-TYPE
  CLUS_1           13                 75
  CLUS_2           10                 28
D32V7, multiclass
        clus
vv       19Q GAIN CNV 19Q GAIN WILD-TYPE
  CLUS_1           11                 39
  CLUS_2            1                 33
  CLUS_3           11                 31
D32V8, multiclass
        clus
vv       19Q GAIN CNV 19Q GAIN WILD-TYPE
  CLUS_1            4                 43
  CLUS_2            9                 32
  CLUS_3           10                 28

Clustering(33) Variable = 20p gain
D33V1, multiclass
        clus
vv       20P GAIN CNV 20P GAIN WILD-TYPE
  CLUS_1           18                 36
  CLUS_2           12                 31
  CLUS_3            7                 51
D33V2, multiclass
D33V3, multiclass
D33V4, multiclass
        clus
vv       20P GAIN CNV 20P GAIN WILD-TYPE
  CLUS_1           14                 33
  CLUS_2           12                 61
  CLUS_3            8                 12
D33V5, multiclass
        clus
vv       20P GAIN CNV 20P GAIN WILD-TYPE
  CLUS_1            9                 24
  CLUS_2           10                 33
  CLUS_3            4                  9
  CLUS_4            9                 28
D33V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  20P GAIN CNV         19   13
  20P GAIN WILD-TYPE   69   25
        clus
vv       20P GAIN CNV 20P GAIN WILD-TYPE
  CLUS_1           19                 69
  CLUS_2           13                 25
D33V7, multiclass
        clus
vv       20P GAIN CNV 20P GAIN WILD-TYPE
  CLUS_1           11                 39
  CLUS_2           10                 24
  CLUS_3           11                 31
D33V8, multiclass
        clus
vv       20P GAIN CNV 20P GAIN WILD-TYPE
  CLUS_1           10                 37
  CLUS_2           10                 31
  CLUS_3           12                 26

Clustering(34) Variable = 20q gain
D34V1, multiclass
        clus
vv       20Q GAIN CNV 20Q GAIN WILD-TYPE
  CLUS_1           21                 33
  CLUS_2           14                 29
  CLUS_3            9                 49
D34V2, multiclass
D34V3, multiclass
D34V4, multiclass
        clus
vv       20Q GAIN CNV 20Q GAIN WILD-TYPE
  CLUS_1           16                 31
  CLUS_2           15                 58
  CLUS_3            6                 14
D34V5, multiclass
        clus
vv       20Q GAIN CNV 20Q GAIN WILD-TYPE
  CLUS_1           11                 22
  CLUS_2           11                 32
  CLUS_3            5                  8
  CLUS_4           12                 25
D34V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  20Q GAIN CNV         24   15
  20Q GAIN WILD-TYPE   64   23
        clus
vv       20Q GAIN CNV 20Q GAIN WILD-TYPE
  CLUS_1           24                 64
  CLUS_2           15                 23
D34V7, multiclass
        clus
vv       20Q GAIN CNV 20Q GAIN WILD-TYPE
  CLUS_1           15                 35
  CLUS_2           11                 23
  CLUS_3           13                 29
D34V8, multiclass
        clus
vv       20Q GAIN CNV 20Q GAIN WILD-TYPE
  CLUS_1           11                 36
  CLUS_2           14                 27
  CLUS_3           14                 24

Clustering(35) Variable = 21q gain
D35V1, multiclass
        clus
vv       21Q GAIN CNV 21Q GAIN WILD-TYPE
  CLUS_1            7                 47
  CLUS_2            4                 39
  CLUS_3            5                 53
D35V2, multiclass
D35V3, multiclass
D35V4, multiclass
        clus
vv       21Q GAIN CNV 21Q GAIN WILD-TYPE
  CLUS_1            5                 42
  CLUS_2            7                 66
  CLUS_3            3                 17
D35V5, multiclass
        clus
vv       21Q GAIN CNV 21Q GAIN WILD-TYPE
  CLUS_1            5                 28
  CLUS_2            2                 41
  CLUS_3            2                 11
  CLUS_4            5                 32
D35V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  21Q GAIN CNV          9    5
  21Q GAIN WILD-TYPE   79   33
        clus
vv       21Q GAIN CNV 21Q GAIN WILD-TYPE
  CLUS_1            9                 79
  CLUS_2            5                 33
D35V7, multiclass
        clus
vv       21Q GAIN CNV 21Q GAIN WILD-TYPE
  CLUS_1            3                 47
  CLUS_2            6                 28
  CLUS_3            5                 37
D35V8, multiclass
        clus
vv       21Q GAIN CNV 21Q GAIN WILD-TYPE
  CLUS_1            7                 40
  CLUS_2            2                 39
  CLUS_3            5                 33

Clustering(36) Variable = 22q gain
D36V1, multiclass
        clus
vv       22Q GAIN CNV 22Q GAIN WILD-TYPE
  CLUS_1            7                 47
  CLUS_2            3                 40
  CLUS_3            2                 56
D36V2, multiclass
D36V3, multiclass
D36V4, multiclass
        clus
vv       22Q GAIN CNV 22Q GAIN WILD-TYPE
  CLUS_1            2                 45
  CLUS_2            5                 68
  CLUS_3            5                 15
D36V5, multiclass
        clus
vv       22Q GAIN CNV 22Q GAIN WILD-TYPE
  CLUS_1            4                 29
  CLUS_2            1                 42
  CLUS_3            1                 12
  CLUS_4            2                 35
D36V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  22Q GAIN CNV          6    2
  22Q GAIN WILD-TYPE   82   36
        clus
vv       22Q GAIN CNV 22Q GAIN WILD-TYPE
  CLUS_1            6                 82
  CLUS_2            2                 36
D36V7, multiclass
        clus
vv       22Q GAIN CNV 22Q GAIN WILD-TYPE
  CLUS_1            3                 47
  CLUS_2            4                 30
  CLUS_3            1                 41
D36V8, multiclass
        clus
vv       22Q GAIN CNV 22Q GAIN WILD-TYPE
  CLUS_1            5                 42
  CLUS_2            1                 40
  CLUS_3            2                 36

Clustering(37) Variable = Xq gain
D37V1, multiclass
        clus
vv       XQ GAIN CNV XQ GAIN WILD-TYPE
  CLUS_1           4                50
  CLUS_2           4                39
  CLUS_3           3                55
D37V2, multiclass
D37V3, multiclass
D37V4, multiclass
        clus
vv       XQ GAIN CNV XQ GAIN WILD-TYPE
  CLUS_1           5                42
  CLUS_2           3                70
  CLUS_3           3                17
D37V5, multiclass
        clus
vv       XQ GAIN CNV XQ GAIN WILD-TYPE
  CLUS_1           0                33
  CLUS_2           5                38
  CLUS_3           0                13
  CLUS_4           3                34
D37V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  XQ GAIN CNV          4    4
  XQ GAIN WILD-TYPE   84   34
        clus
vv       XQ GAIN CNV XQ GAIN WILD-TYPE
  CLUS_1           4                84
  CLUS_2           4                34
D37V7, multiclass
        clus
vv       XQ GAIN CNV XQ GAIN WILD-TYPE
  CLUS_1           4                46
  CLUS_2           0                34
  CLUS_3           4                38
D37V8, multiclass
        clus
vv       XQ GAIN CNV XQ GAIN WILD-TYPE
  CLUS_1           2                45
  CLUS_2           2                39
  CLUS_3           4                34

Clustering(38) Variable = 1q loss
D38V1, multiclass
        clus
vv       1Q LOSS CNV 1Q LOSS WILD-TYPE
  CLUS_1           0                54
  CLUS_2           2                41
  CLUS_3           1                57
D38V2, multiclass
D38V3, multiclass
D38V4, multiclass
        clus
vv       1Q LOSS CNV 1Q LOSS WILD-TYPE
  CLUS_1           2                45
  CLUS_2           1                72
  CLUS_3           0                20
D38V5, multiclass
        clus
vv       1Q LOSS CNV 1Q LOSS WILD-TYPE
  CLUS_1           0                33
  CLUS_2           2                41
  CLUS_3           0                13
  CLUS_4           1                36
D38V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  1Q LOSS CNV          2    1
  1Q LOSS WILD-TYPE   86   37
        clus
vv       1Q LOSS CNV 1Q LOSS WILD-TYPE
  CLUS_1           2                86
  CLUS_2           1                37
D38V7, multiclass
        clus
vv       1Q LOSS CNV 1Q LOSS WILD-TYPE
  CLUS_1           2                48
  CLUS_2           0                34
  CLUS_3           1                41
D38V8, multiclass
        clus
vv       1Q LOSS CNV 1Q LOSS WILD-TYPE
  CLUS_1           0                47
  CLUS_2           2                39
  CLUS_3           1                37

Clustering(39) Variable = 2p loss
D39V1, multiclass
        clus
vv       2P LOSS CNV 2P LOSS WILD-TYPE
  CLUS_1           2                52
  CLUS_2           1                42
  CLUS_3           1                57
D39V2, multiclass
D39V3, multiclass
D39V4, multiclass
        clus
vv       2P LOSS CNV 2P LOSS WILD-TYPE
  CLUS_1           1                46
  CLUS_2           2                71
  CLUS_3           1                19
D39V5, multiclass
        clus
vv       2P LOSS CNV 2P LOSS WILD-TYPE
  CLUS_1           1                32
  CLUS_2           2                41
  CLUS_3           0                13
  CLUS_4           0                37
D39V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  2P LOSS CNV          3    0
  2P LOSS WILD-TYPE   85   38
        clus
vv       2P LOSS CNV 2P LOSS WILD-TYPE
  CLUS_1           3                85
  CLUS_2           0                38
D39V7, multiclass
        clus
vv       2P LOSS CNV 2P LOSS WILD-TYPE
  CLUS_1           1                49
  CLUS_2           1                33
  CLUS_3           1                41
D39V8, multiclass
        clus
vv       2P LOSS CNV 2P LOSS WILD-TYPE
  CLUS_1           2                45
  CLUS_2           1                40
  CLUS_3           0                38

Clustering(40) Variable = 2q loss
D40V1, multiclass
        clus
vv       2Q LOSS CNV 2Q LOSS WILD-TYPE
  CLUS_1           5                49
  CLUS_2           1                42
  CLUS_3           2                56
D40V2, multiclass
D40V3, multiclass
D40V4, multiclass
        clus
vv       2Q LOSS CNV 2Q LOSS WILD-TYPE
  CLUS_1           1                46
  CLUS_2           6                67
  CLUS_3           1                19
D40V5, multiclass
        clus
vv       2Q LOSS CNV 2Q LOSS WILD-TYPE
  CLUS_1           1                32
  CLUS_2           2                41
  CLUS_3           0                13
  CLUS_4           1                36
D40V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  2Q LOSS CNV          3    1
  2Q LOSS WILD-TYPE   85   37
        clus
vv       2Q LOSS CNV 2Q LOSS WILD-TYPE
  CLUS_1           3                85
  CLUS_2           1                37
D40V7, multiclass
        clus
vv       2Q LOSS CNV 2Q LOSS WILD-TYPE
  CLUS_1           1                49
  CLUS_2           1                33
  CLUS_3           2                40
D40V8, multiclass
        clus
vv       2Q LOSS CNV 2Q LOSS WILD-TYPE
  CLUS_1           2                45
  CLUS_2           1                40
  CLUS_3           1                37

Clustering(41) Variable = 3p loss
D41V1, multiclass
        clus
vv       3P LOSS CNV 3P LOSS WILD-TYPE
  CLUS_1          10                44
  CLUS_2          15                28
  CLUS_3           7                51
D41V2, multiclass
D41V3, multiclass
D41V4, multiclass
        clus
vv       3P LOSS CNV 3P LOSS WILD-TYPE
  CLUS_1           2                45
  CLUS_2          24                49
  CLUS_3           6                14
D41V5, multiclass
        clus
vv       3P LOSS CNV 3P LOSS WILD-TYPE
  CLUS_1           7                26
  CLUS_2          15                28
  CLUS_3           2                11
  CLUS_4           2                35
D41V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  3P LOSS CNV         25    1
  3P LOSS WILD-TYPE   63   37
        clus
vv       3P LOSS CNV 3P LOSS WILD-TYPE
  CLUS_1          25                63
  CLUS_2           1                37
D41V7, multiclass
        clus
vv       3P LOSS CNV 3P LOSS WILD-TYPE
  CLUS_1          15                35
  CLUS_2           9                25
  CLUS_3           2                40
D41V8, multiclass
        clus
vv       3P LOSS CNV 3P LOSS WILD-TYPE
  CLUS_1          13                34
  CLUS_2          12                29
  CLUS_3           1                37

Clustering(42) Variable = 4p loss
D42V1, multiclass
        clus
vv       4P LOSS CNV 4P LOSS WILD-TYPE
  CLUS_1          22                32
  CLUS_2          19                24
  CLUS_3           9                49
D42V2, multiclass
D42V3, multiclass
D42V4, multiclass
        clus
vv       4P LOSS CNV 4P LOSS WILD-TYPE
  CLUS_1          12                35
  CLUS_2          25                48
  CLUS_3           9                11
D42V5, multiclass
        clus
vv       4P LOSS CNV 4P LOSS WILD-TYPE
  CLUS_1          13                20
  CLUS_2          16                27
  CLUS_3           2                11
  CLUS_4          10                27
D42V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  4P LOSS CNV         32    9
  4P LOSS WILD-TYPE   56   29
        clus
vv       4P LOSS CNV 4P LOSS WILD-TYPE
  CLUS_1          32                56
  CLUS_2           9                29
D42V7, multiclass
        clus
vv       4P LOSS CNV 4P LOSS WILD-TYPE
  CLUS_1          20                30
  CLUS_2          11                23
  CLUS_3          10                32
D42V8, multiclass
        clus
vv       4P LOSS CNV 4P LOSS WILD-TYPE
  CLUS_1          16                31
  CLUS_2          17                24
  CLUS_3           8                30

Clustering(43) Variable = 4q loss
D43V1, multiclass
        clus
vv       4Q LOSS CNV 4Q LOSS WILD-TYPE
  CLUS_1          10                44
  CLUS_2          16                27
  CLUS_3           4                54
D43V2, multiclass
D43V3, multiclass
D43V4, multiclass
        clus
vv       4Q LOSS CNV 4Q LOSS WILD-TYPE
  CLUS_1          11                36
  CLUS_2          11                62
  CLUS_3           7                13
D43V5, multiclass
        clus
vv       4Q LOSS CNV 4Q LOSS WILD-TYPE
  CLUS_1           4                29
  CLUS_2          10                33
  CLUS_3           2                11
  CLUS_4           8                29
D43V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  4Q LOSS CNV         17    7
  4Q LOSS WILD-TYPE   71   31
        clus
vv       4Q LOSS CNV 4Q LOSS WILD-TYPE
  CLUS_1          17                71
  CLUS_2           7                31
D43V7, multiclass
        clus
vv       4Q LOSS CNV 4Q LOSS WILD-TYPE
  CLUS_1           9                41
  CLUS_2           6                28
  CLUS_3           9                33
D43V8, multiclass
        clus
vv       4Q LOSS CNV 4Q LOSS WILD-TYPE
  CLUS_1           7                40
  CLUS_2           9                32
  CLUS_3           8                30

Clustering(44) Variable = 5p loss
D44V1, multiclass
        clus
vv       5P LOSS CNV 5P LOSS WILD-TYPE
  CLUS_1           2                52
  CLUS_2           1                42
  CLUS_3           0                58
D44V2, multiclass
D44V3, multiclass
D44V4, multiclass
        clus
vv       5P LOSS CNV 5P LOSS WILD-TYPE
  CLUS_1           1                46
  CLUS_2           2                71
  CLUS_3           0                20
D44V5, multiclass
        clus
vv       5P LOSS CNV 5P LOSS WILD-TYPE
  CLUS_1           2                31
  CLUS_2           0                43
  CLUS_3           0                13
  CLUS_4           1                36
D44V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  5P LOSS CNV          2    1
  5P LOSS WILD-TYPE   86   37
        clus
vv       5P LOSS CNV 5P LOSS WILD-TYPE
  CLUS_1           2                86
  CLUS_2           1                37
D44V7, multiclass
        clus
vv       5P LOSS CNV 5P LOSS WILD-TYPE
  CLUS_1           1                49
  CLUS_2           1                33
  CLUS_3           1                41
D44V8, multiclass
        clus
vv       5P LOSS CNV 5P LOSS WILD-TYPE
  CLUS_1           2                45
  CLUS_2           0                41
  CLUS_3           1                37

Clustering(45) Variable = 5q loss
D45V1, multiclass
        clus
vv       5Q LOSS CNV 5Q LOSS WILD-TYPE
  CLUS_1           9                45
  CLUS_2          12                31
  CLUS_3           1                57
D45V2, multiclass
D45V3, multiclass
D45V4, multiclass
        clus
vv       5Q LOSS CNV 5Q LOSS WILD-TYPE
  CLUS_1           4                43
  CLUS_2          16                57
  CLUS_3           1                19
D45V5, multiclass
        clus
vv       5Q LOSS CNV 5Q LOSS WILD-TYPE
  CLUS_1           7                26
  CLUS_2           9                34
  CLUS_3           0                13
  CLUS_4           3                34
D45V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  5Q LOSS CNV         18    1
  5Q LOSS WILD-TYPE   70   37
        clus
vv       5Q LOSS CNV 5Q LOSS WILD-TYPE
  CLUS_1          18                70
  CLUS_2           1                37
D45V7, multiclass
        clus
vv       5Q LOSS CNV 5Q LOSS WILD-TYPE
  CLUS_1          12                38
  CLUS_2           4                30
  CLUS_3           3                39
D45V8, multiclass
        clus
vv       5Q LOSS CNV 5Q LOSS WILD-TYPE
  CLUS_1           8                39
  CLUS_2           9                32
  CLUS_3           2                36

Clustering(46) Variable = 6p loss
D46V1, multiclass
        clus
vv       6P LOSS CNV 6P LOSS WILD-TYPE
  CLUS_1           5                49
  CLUS_2           6                37
  CLUS_3           5                53
D46V2, multiclass
D46V3, multiclass
D46V4, multiclass
        clus
vv       6P LOSS CNV 6P LOSS WILD-TYPE
  CLUS_1           2                45
  CLUS_2          12                61
  CLUS_3           1                19
D46V5, multiclass
        clus
vv       6P LOSS CNV 6P LOSS WILD-TYPE
  CLUS_1           2                31
  CLUS_2           6                37
  CLUS_3           1                12
  CLUS_4           4                33
D46V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  6P LOSS CNV          9    4
  6P LOSS WILD-TYPE   79   34
        clus
vv       6P LOSS CNV 6P LOSS WILD-TYPE
  CLUS_1           9                79
  CLUS_2           4                34
D46V7, multiclass
        clus
vv       6P LOSS CNV 6P LOSS WILD-TYPE
  CLUS_1           6                44
  CLUS_2           3                31
  CLUS_3           4                38
D46V8, multiclass
        clus
vv       6P LOSS CNV 6P LOSS WILD-TYPE
  CLUS_1           5                42
  CLUS_2           4                37
  CLUS_3           4                34

Clustering(47) Variable = 6q loss
D47V1, multiclass
        clus
vv       6Q LOSS CNV 6Q LOSS WILD-TYPE
  CLUS_1           8                46
  CLUS_2          11                32
  CLUS_3           9                49
D47V2, multiclass
D47V3, multiclass
D47V4, multiclass
        clus
vv       6Q LOSS CNV 6Q LOSS WILD-TYPE
  CLUS_1           8                39
  CLUS_2          16                57
  CLUS_3           2                18
D47V5, multiclass
        clus
vv       6Q LOSS CNV 6Q LOSS WILD-TYPE
  CLUS_1           3                30
  CLUS_2          10                33
  CLUS_3           3                10
  CLUS_4           8                29
D47V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  6Q LOSS CNV         16    8
  6Q LOSS WILD-TYPE   72   30
        clus
vv       6Q LOSS CNV 6Q LOSS WILD-TYPE
  CLUS_1          16                72
  CLUS_2           8                30
D47V7, multiclass
        clus
vv       6Q LOSS CNV 6Q LOSS WILD-TYPE
  CLUS_1          12                38
  CLUS_2           4                30
  CLUS_3           8                34
D47V8, multiclass
        clus
vv       6Q LOSS CNV 6Q LOSS WILD-TYPE
  CLUS_1           9                38
  CLUS_2           6                35
  CLUS_3           9                29

Clustering(48) Variable = 7p loss
D48V1, multiclass
        clus
vv       7P LOSS CNV 7P LOSS WILD-TYPE
  CLUS_1           3                51
  CLUS_2           3                40
  CLUS_3           0                58
D48V2, multiclass
D48V3, multiclass
D48V4, multiclass
        clus
vv       7P LOSS CNV 7P LOSS WILD-TYPE
  CLUS_1           3                44
  CLUS_2           1                72
  CLUS_3           2                18
D48V5, multiclass
        clus
vv       7P LOSS CNV 7P LOSS WILD-TYPE
  CLUS_1           1                32
  CLUS_2           2                41
  CLUS_3           0                13
  CLUS_4           3                34
D48V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  7P LOSS CNV          3    3
  7P LOSS WILD-TYPE   85   35
        clus
vv       7P LOSS CNV 7P LOSS WILD-TYPE
  CLUS_1           3                85
  CLUS_2           3                35
D48V7, multiclass
        clus
vv       7P LOSS CNV 7P LOSS WILD-TYPE
  CLUS_1           1                49
  CLUS_2           1                33
  CLUS_3           4                38
D48V8, multiclass
        clus
vv       7P LOSS CNV 7P LOSS WILD-TYPE
  CLUS_1           2                45
  CLUS_2           1                40
  CLUS_3           3                35

Clustering(49) Variable = 7q loss
D49V1, multiclass
        clus
vv       7Q LOSS CNV 7Q LOSS WILD-TYPE
  CLUS_1           3                51
  CLUS_2           7                36
  CLUS_3           5                53
D49V2, multiclass
D49V3, multiclass
D49V4, multiclass
        clus
vv       7Q LOSS CNV 7Q LOSS WILD-TYPE
  CLUS_1           8                39
  CLUS_2           5                68
  CLUS_3           2                18
D49V5, multiclass
        clus
vv       7Q LOSS CNV 7Q LOSS WILD-TYPE
  CLUS_1           1                32
  CLUS_2           8                35
  CLUS_3           0                13
  CLUS_4           4                33
D49V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  7Q LOSS CNV         10    3
  7Q LOSS WILD-TYPE   78   35
        clus
vv       7Q LOSS CNV 7Q LOSS WILD-TYPE
  CLUS_1          10                78
  CLUS_2           3                35
D49V7, multiclass
        clus
vv       7Q LOSS CNV 7Q LOSS WILD-TYPE
  CLUS_1           6                44
  CLUS_2           1                33
  CLUS_3           6                36
D49V8, multiclass
        clus
vv       7Q LOSS CNV 7Q LOSS WILD-TYPE
  CLUS_1           1                46
  CLUS_2           8                33
  CLUS_3           4                34

Clustering(50) Variable = 8p loss
D50V1, multiclass
        clus
vv       8P LOSS CNV 8P LOSS WILD-TYPE
  CLUS_1          12                42
  CLUS_2           8                35
  CLUS_3           9                49
D50V2, multiclass
D50V3, multiclass
D50V4, multiclass
        clus
vv       8P LOSS CNV 8P LOSS WILD-TYPE
  CLUS_1           7                40
  CLUS_2          16                57
  CLUS_3           5                15
D50V5, multiclass
        clus
vv       8P LOSS CNV 8P LOSS WILD-TYPE
  CLUS_1           9                24
  CLUS_2           9                34
  CLUS_3           2                11
  CLUS_4           8                29
D50V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  8P LOSS CNV         20    8
  8P LOSS WILD-TYPE   68   30
        clus
vv       8P LOSS CNV 8P LOSS WILD-TYPE
  CLUS_1          20                68
  CLUS_2           8                30
D50V7, multiclass
        clus
vv       8P LOSS CNV 8P LOSS WILD-TYPE
  CLUS_1          13                37
  CLUS_2           7                27
  CLUS_3           8                34
D50V8, multiclass
        clus
vv       8P LOSS CNV 8P LOSS WILD-TYPE
  CLUS_1          11                36
  CLUS_2           9                32
  CLUS_3           8                30

Clustering(51) Variable = 8q loss
D51V1, multiclass
        clus
vv       8Q LOSS CNV 8Q LOSS WILD-TYPE
  CLUS_1           1                53
  CLUS_2           3                40
  CLUS_3           3                55
D51V2, multiclass
D51V3, multiclass
D51V4, multiclass
        clus
vv       8Q LOSS CNV 8Q LOSS WILD-TYPE
  CLUS_1           3                44
  CLUS_2           2                71
  CLUS_3           1                19
D51V5, multiclass
        clus
vv       8Q LOSS CNV 8Q LOSS WILD-TYPE
  CLUS_1           0                33
  CLUS_2           2                41
  CLUS_3           1                12
  CLUS_4           4                33
D51V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  8Q LOSS CNV          2    5
  8Q LOSS WILD-TYPE   86   33
        clus
vv       8Q LOSS CNV 8Q LOSS WILD-TYPE
  CLUS_1           2                86
  CLUS_2           5                33
D51V7, multiclass
        clus
vv       8Q LOSS CNV 8Q LOSS WILD-TYPE
  CLUS_1           2                48
  CLUS_2           0                34
  CLUS_3           5                37
D51V8, multiclass
        clus
vv       8Q LOSS CNV 8Q LOSS WILD-TYPE
  CLUS_1           0                47
  CLUS_2           2                39
  CLUS_3           5                33

Clustering(52) Variable = 9p loss
D52V1, multiclass
        clus
vv       9P LOSS CNV 9P LOSS WILD-TYPE
  CLUS_1           6                48
  CLUS_2           5                38
  CLUS_3           2                56
D52V2, multiclass
D52V3, multiclass
D52V4, multiclass
        clus
vv       9P LOSS CNV 9P LOSS WILD-TYPE
  CLUS_1           2                45
  CLUS_2           7                66
  CLUS_3           1                19
D52V5, multiclass
        clus
vv       9P LOSS CNV 9P LOSS WILD-TYPE
  CLUS_1           3                30
  CLUS_2           5                38
  CLUS_3           1                12
  CLUS_4           3                34
D52V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  9P LOSS CNV          9    3
  9P LOSS WILD-TYPE   79   35
        clus
vv       9P LOSS CNV 9P LOSS WILD-TYPE
  CLUS_1           9                79
  CLUS_2           3                35
D52V7, multiclass
        clus
vv       9P LOSS CNV 9P LOSS WILD-TYPE
  CLUS_1           6                44
  CLUS_2           4                30
  CLUS_3           2                40
D52V8, multiclass
        clus
vv       9P LOSS CNV 9P LOSS WILD-TYPE
  CLUS_1           3                44
  CLUS_2           6                35
  CLUS_3           3                35

Clustering(53) Variable = 9q loss
D53V1, multiclass
        clus
vv       9Q LOSS CNV 9Q LOSS WILD-TYPE
  CLUS_1           2                52
  CLUS_2           6                37
  CLUS_3           3                55
D53V2, multiclass
D53V3, multiclass
D53V4, multiclass
        clus
vv       9Q LOSS CNV 9Q LOSS WILD-TYPE
  CLUS_1           5                42
  CLUS_2           4                69
  CLUS_3           0                20
D53V5, multiclass
        clus
vv       9Q LOSS CNV 9Q LOSS WILD-TYPE
  CLUS_1           2                31
  CLUS_2           2                41
  CLUS_3           2                11
  CLUS_4           5                32
D53V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  9Q LOSS CNV          5    6
  9Q LOSS WILD-TYPE   83   32
        clus
vv       9Q LOSS CNV 9Q LOSS WILD-TYPE
  CLUS_1           5                83
  CLUS_2           6                32
D53V7, multiclass
        clus
vv       9Q LOSS CNV 9Q LOSS WILD-TYPE
  CLUS_1           3                47
  CLUS_2           3                31
  CLUS_3           5                37
D53V8, multiclass
        clus
vv       9Q LOSS CNV 9Q LOSS WILD-TYPE
  CLUS_1           2                45
  CLUS_2           3                38
  CLUS_3           6                32

Clustering(54) Variable = 10p loss
D54V1, multiclass
        clus
vv       10P LOSS CNV 10P LOSS WILD-TYPE
  CLUS_1            8                 46
  CLUS_2           10                 33
  CLUS_3            7                 51
D54V2, multiclass
D54V3, multiclass
D54V4, multiclass
        clus
vv       10P LOSS CNV 10P LOSS WILD-TYPE
  CLUS_1            9                 38
  CLUS_2            8                 65
  CLUS_3            6                 14
D54V5, multiclass
        clus
vv       10P LOSS CNV 10P LOSS WILD-TYPE
  CLUS_1            4                 29
  CLUS_2            8                 35
  CLUS_3            2                 11
  CLUS_4            8                 29
D54V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  10P LOSS CNV         14    8
  10P LOSS WILD-TYPE   74   30
        clus
vv       10P LOSS CNV 10P LOSS WILD-TYPE
  CLUS_1           14                 74
  CLUS_2            8                 30
D54V7, multiclass
        clus
vv       10P LOSS CNV 10P LOSS WILD-TYPE
  CLUS_1            7                 43
  CLUS_2            6                 28
  CLUS_3            9                 33
D54V8, multiclass
        clus
vv       10P LOSS CNV 10P LOSS WILD-TYPE
  CLUS_1            6                 41
  CLUS_2            8                 33
  CLUS_3            8                 30

Clustering(55) Variable = 10q loss
D55V1, multiclass
        clus
vv       10Q LOSS CNV 10Q LOSS WILD-TYPE
  CLUS_1            9                 45
  CLUS_2           10                 33
  CLUS_3            8                 50
D55V2, multiclass
D55V3, multiclass
D55V4, multiclass
        clus
vv       10Q LOSS CNV 10Q LOSS WILD-TYPE
  CLUS_1           11                 36
  CLUS_2            9                 64
  CLUS_3            5                 15
D55V5, multiclass
        clus
vv       10Q LOSS CNV 10Q LOSS WILD-TYPE
  CLUS_1            4                 29
  CLUS_2            8                 35
  CLUS_3            2                 11
  CLUS_4           10                 27
D55V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  10Q LOSS CNV         15    9
  10Q LOSS WILD-TYPE   73   29
        clus
vv       10Q LOSS CNV 10Q LOSS WILD-TYPE
  CLUS_1           15                 73
  CLUS_2            9                 29
D55V7, multiclass
        clus
vv       10Q LOSS CNV 10Q LOSS WILD-TYPE
  CLUS_1            7                 43
  CLUS_2            6                 28
  CLUS_3           11                 31
D55V8, multiclass
        clus
vv       10Q LOSS CNV 10Q LOSS WILD-TYPE
  CLUS_1            6                 41
  CLUS_2            8                 33
  CLUS_3           10                 28

Clustering(56) Variable = 11p loss
D56V1, multiclass
        clus
vv       11P LOSS CNV 11P LOSS WILD-TYPE
  CLUS_1           13                 41
  CLUS_2           14                 29
  CLUS_3            6                 52
D56V2, multiclass
D56V3, multiclass
D56V4, multiclass
        clus
vv       11P LOSS CNV 11P LOSS WILD-TYPE
  CLUS_1            7                 40
  CLUS_2           16                 57
  CLUS_3            7                 13
D56V5, multiclass
        clus
vv       11P LOSS CNV 11P LOSS WILD-TYPE
  CLUS_1            7                 26
  CLUS_2           10                 33
  CLUS_3            3                 10
  CLUS_4            5                 32
D56V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  11P LOSS CNV         19    6
  11P LOSS WILD-TYPE   69   32
        clus
vv       11P LOSS CNV 11P LOSS WILD-TYPE
  CLUS_1           19                 69
  CLUS_2            6                 32
D56V7, multiclass
        clus
vv       11P LOSS CNV 11P LOSS WILD-TYPE
  CLUS_1           12                 38
  CLUS_2            7                 27
  CLUS_3            6                 36
D56V8, multiclass
        clus
vv       11P LOSS CNV 11P LOSS WILD-TYPE
  CLUS_1            7                 40
  CLUS_2           12                 29
  CLUS_3            6                 32

Clustering(57) Variable = 11q loss
D57V1, multiclass
        clus
vv       11Q LOSS CNV 11Q LOSS WILD-TYPE
  CLUS_1           18                 36
  CLUS_2            9                 34
  CLUS_3            9                 49
D57V2, multiclass
D57V3, multiclass
D57V4, multiclass
        clus
vv       11Q LOSS CNV 11Q LOSS WILD-TYPE
  CLUS_1            8                 39
  CLUS_2           13                 60
  CLUS_3           10                 10
D57V5, multiclass
        clus
vv       11Q LOSS CNV 11Q LOSS WILD-TYPE
  CLUS_1            8                 25
  CLUS_2            9                 34
  CLUS_3            3                 10
  CLUS_4            9                 28
D57V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  11Q LOSS CNV         19   10
  11Q LOSS WILD-TYPE   69   28
        clus
vv       11Q LOSS CNV 11Q LOSS WILD-TYPE
  CLUS_1           19                 69
  CLUS_2           10                 28
D57V7, multiclass
        clus
vv       11Q LOSS CNV 11Q LOSS WILD-TYPE
  CLUS_1           11                 39
  CLUS_2            9                 25
  CLUS_3            9                 33
D57V8, multiclass
        clus
vv       11Q LOSS CNV 11Q LOSS WILD-TYPE
  CLUS_1           10                 37
  CLUS_2           10                 31
  CLUS_3            9                 29

Clustering(58) Variable = 12p loss
D58V1, multiclass
        clus
vv       12P LOSS CNV 12P LOSS WILD-TYPE
  CLUS_1            5                 49
  CLUS_2           11                 32
  CLUS_3            3                 55
D58V2, multiclass
D58V3, multiclass
D58V4, multiclass
        clus
vv       12P LOSS CNV 12P LOSS WILD-TYPE
  CLUS_1            4                 43
  CLUS_2           11                 62
  CLUS_3            1                 19
D58V5, multiclass
        clus
vv       12P LOSS CNV 12P LOSS WILD-TYPE
  CLUS_1            5                 28
  CLUS_2            9                 34
  CLUS_3            1                 12
  CLUS_4            4                 33
D58V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  12P LOSS CNV         16    3
  12P LOSS WILD-TYPE   72   35
        clus
vv       12P LOSS CNV 12P LOSS WILD-TYPE
  CLUS_1           16                 72
  CLUS_2            3                 35
D58V7, multiclass
        clus
vv       12P LOSS CNV 12P LOSS WILD-TYPE
  CLUS_1           10                 40
  CLUS_2            4                 30
  CLUS_3            5                 37
D58V8, multiclass
        clus
vv       12P LOSS CNV 12P LOSS WILD-TYPE
  CLUS_1            6                 41
  CLUS_2           10                 31
  CLUS_3            3                 35

Clustering(59) Variable = 12q loss
D59V1, multiclass
        clus
vv       12Q LOSS CNV 12Q LOSS WILD-TYPE
  CLUS_1            1                 53
  CLUS_2            3                 40
  CLUS_3            0                 58
D59V2, multiclass
D59V3, multiclass
D59V4, multiclass
        clus
vv       12Q LOSS CNV 12Q LOSS WILD-TYPE
  CLUS_1            0                 47
  CLUS_2            3                 70
  CLUS_3            1                 19
D59V5, multiclass
        clus
vv       12Q LOSS CNV 12Q LOSS WILD-TYPE
  CLUS_1            1                 32
  CLUS_2            2                 41
  CLUS_3            0                 13
  CLUS_4            1                 36
D59V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  12Q LOSS CNV          3    1
  12Q LOSS WILD-TYPE   85   37
        clus
vv       12Q LOSS CNV 12Q LOSS WILD-TYPE
  CLUS_1            3                 85
  CLUS_2            1                 37
D59V7, multiclass
        clus
vv       12Q LOSS CNV 12Q LOSS WILD-TYPE
  CLUS_1            2                 48
  CLUS_2            1                 33
  CLUS_3            1                 41
D59V8, multiclass
        clus
vv       12Q LOSS CNV 12Q LOSS WILD-TYPE
  CLUS_1            2                 45
  CLUS_2            1                 40
  CLUS_3            1                 37

Clustering(60) Variable = 13q loss
D60V1, multiclass
        clus
vv       13Q LOSS CNV 13Q LOSS WILD-TYPE
  CLUS_1           13                 41
  CLUS_2           10                 33
  CLUS_3            4                 54
D60V2, multiclass
D60V3, multiclass
D60V4, multiclass
        clus
vv       13Q LOSS CNV 13Q LOSS WILD-TYPE
  CLUS_1            3                 44
  CLUS_2           11                 62
  CLUS_3            7                 13
D60V5, multiclass
        clus
vv       13Q LOSS CNV 13Q LOSS WILD-TYPE
  CLUS_1           10                 23
  CLUS_2           11                 32
  CLUS_3            1                 12
  CLUS_4            2                 35
D60V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  13Q LOSS CNV         20    4
  13Q LOSS WILD-TYPE   68   34
        clus
vv       13Q LOSS CNV 13Q LOSS WILD-TYPE
  CLUS_1           20                 68
  CLUS_2            4                 34
D60V7, multiclass
        clus
vv       13Q LOSS CNV 13Q LOSS WILD-TYPE
  CLUS_1           12                 38
  CLUS_2            8                 26
  CLUS_3            4                 38
D60V8, multiclass
        clus
vv       13Q LOSS CNV 13Q LOSS WILD-TYPE
  CLUS_1            9                 38
  CLUS_2           11                 30
  CLUS_3            4                 34

Clustering(61) Variable = 14q loss
D61V1, multiclass
        clus
vv       14Q LOSS CNV 14Q LOSS WILD-TYPE
  CLUS_1            1                 53
  CLUS_2            3                 40
  CLUS_3            3                 55
D61V2, multiclass
D61V3, multiclass
D61V4, multiclass
        clus
vv       14Q LOSS CNV 14Q LOSS WILD-TYPE
  CLUS_1            4                 43
  CLUS_2            0                 73
  CLUS_3            2                 18
D61V5, multiclass
        clus
vv       14Q LOSS CNV 14Q LOSS WILD-TYPE
  CLUS_1            0                 33
  CLUS_2            2                 41
  CLUS_3            1                 12
  CLUS_4            4                 33
D61V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  14Q LOSS CNV          2    5
  14Q LOSS WILD-TYPE   86   33
        clus
vv       14Q LOSS CNV 14Q LOSS WILD-TYPE
  CLUS_1            2                 86
  CLUS_2            5                 33
D61V7, multiclass
        clus
vv       14Q LOSS CNV 14Q LOSS WILD-TYPE
  CLUS_1            1                 49
  CLUS_2            1                 33
  CLUS_3            5                 37
D61V8, multiclass
        clus
vv       14Q LOSS CNV 14Q LOSS WILD-TYPE
  CLUS_1            1                 46
  CLUS_2            1                 40
  CLUS_3            5                 33

Clustering(62) Variable = 15q loss
D62V1, multiclass
        clus
vv       15Q LOSS CNV 15Q LOSS WILD-TYPE
  CLUS_1            3                 51
  CLUS_2            5                 38
  CLUS_3            1                 57
D62V2, multiclass
D62V3, multiclass
D62V4, multiclass
        clus
vv       15Q LOSS CNV 15Q LOSS WILD-TYPE
  CLUS_1            4                 43
  CLUS_2            2                 71
  CLUS_3            2                 18
D62V5, multiclass
        clus
vv       15Q LOSS CNV 15Q LOSS WILD-TYPE
  CLUS_1            1                 32
  CLUS_2            3                 40
  CLUS_3            1                 12
  CLUS_4            3                 34
D62V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  15Q LOSS CNV          5    3
  15Q LOSS WILD-TYPE   83   35
        clus
vv       15Q LOSS CNV 15Q LOSS WILD-TYPE
  CLUS_1            5                 83
  CLUS_2            3                 35
D62V7, multiclass
        clus
vv       15Q LOSS CNV 15Q LOSS WILD-TYPE
  CLUS_1            3                 47
  CLUS_2            2                 32
  CLUS_3            3                 39
D62V8, multiclass
        clus
vv       15Q LOSS CNV 15Q LOSS WILD-TYPE
  CLUS_1            2                 45
  CLUS_2            3                 38
  CLUS_3            3                 35

Clustering(63) Variable = 16p loss
D63V1, multiclass
        clus
vv       16P LOSS CNV 16P LOSS WILD-TYPE
  CLUS_1            3                 51
  CLUS_2            2                 41
  CLUS_3            4                 54
D63V2, multiclass
D63V3, multiclass
D63V4, multiclass
        clus
vv       16P LOSS CNV 16P LOSS WILD-TYPE
  CLUS_1            4                 43
  CLUS_2            1                 72
  CLUS_3            4                 16
D63V5, multiclass
        clus
vv       16P LOSS CNV 16P LOSS WILD-TYPE
  CLUS_1            1                 32
  CLUS_2            2                 41
  CLUS_3            1                 12
  CLUS_4            5                 32
D63V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  16P LOSS CNV          5    4
  16P LOSS WILD-TYPE   83   34
        clus
vv       16P LOSS CNV 16P LOSS WILD-TYPE
  CLUS_1            5                 83
  CLUS_2            4                 34
D63V7, multiclass
        clus
vv       16P LOSS CNV 16P LOSS WILD-TYPE
  CLUS_1            2                 48
  CLUS_2            2                 32
  CLUS_3            5                 37
D63V8, multiclass
        clus
vv       16P LOSS CNV 16P LOSS WILD-TYPE
  CLUS_1            3                 44
  CLUS_2            1                 40
  CLUS_3            5                 33

Clustering(64) Variable = 16q loss
D64V1, multiclass
        clus
vv       16Q LOSS CNV 16Q LOSS WILD-TYPE
  CLUS_1            5                 49
  CLUS_2            3                 40
  CLUS_3            8                 50
D64V2, multiclass
D64V3, multiclass
D64V4, multiclass
        clus
vv       16Q LOSS CNV 16Q LOSS WILD-TYPE
  CLUS_1            8                 39
  CLUS_2            2                 71
  CLUS_3            6                 14
D64V5, multiclass
        clus
vv       16Q LOSS CNV 16Q LOSS WILD-TYPE
  CLUS_1            2                 31
  CLUS_2            3                 40
  CLUS_3            2                 11
  CLUS_4            8                 29
D64V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  16Q LOSS CNV          6    9
  16Q LOSS WILD-TYPE   82   29
        clus
vv       16Q LOSS CNV 16Q LOSS WILD-TYPE
  CLUS_1            6                 82
  CLUS_2            9                 29
D64V7, multiclass
        clus
vv       16Q LOSS CNV 16Q LOSS WILD-TYPE
  CLUS_1            2                 48
  CLUS_2            3                 31
  CLUS_3           10                 32
D64V8, multiclass
        clus
vv       16Q LOSS CNV 16Q LOSS WILD-TYPE
  CLUS_1            4                 43
  CLUS_2            2                 39
  CLUS_3            9                 29

Clustering(65) Variable = 17p loss
D65V1, multiclass
        clus
vv       17P LOSS CNV 17P LOSS WILD-TYPE
  CLUS_1           14                 40
  CLUS_2           12                 31
  CLUS_3            5                 53
D65V2, multiclass
D65V3, multiclass
D65V4, multiclass
        clus
vv       17P LOSS CNV 17P LOSS WILD-TYPE
  CLUS_1            5                 42
  CLUS_2           19                 54
  CLUS_3            4                 16
D65V5, multiclass
        clus
vv       17P LOSS CNV 17P LOSS WILD-TYPE
  CLUS_1            9                 24
  CLUS_2           13                 30
  CLUS_3            3                 10
  CLUS_4            2                 35
D65V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  17P LOSS CNV         24    3
  17P LOSS WILD-TYPE   64   35
        clus
vv       17P LOSS CNV 17P LOSS WILD-TYPE
  CLUS_1           24                 64
  CLUS_2            3                 35
D65V7, multiclass
        clus
vv       17P LOSS CNV 17P LOSS WILD-TYPE
  CLUS_1           15                 35
  CLUS_2            8                 26
  CLUS_3            4                 38
D65V8, multiclass
        clus
vv       17P LOSS CNV 17P LOSS WILD-TYPE
  CLUS_1           12                 35
  CLUS_2           12                 29
  CLUS_3            3                 35

Clustering(66) Variable = 17q loss
D66V1, multiclass
        clus
vv       17Q LOSS CNV 17Q LOSS WILD-TYPE
  CLUS_1            2                 52
  CLUS_2            2                 41
  CLUS_3            2                 56
D66V2, multiclass
D66V3, multiclass
D66V4, multiclass
        clus
vv       17Q LOSS CNV 17Q LOSS WILD-TYPE
  CLUS_1            0                 47
  CLUS_2            6                 67
  CLUS_3            0                 20
D66V5, multiclass
        clus
vv       17Q LOSS CNV 17Q LOSS WILD-TYPE
  CLUS_1            3                 30
  CLUS_2            2                 41
  CLUS_3            0                 13
  CLUS_4            0                 37
D66V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  17Q LOSS CNV          5    0
  17Q LOSS WILD-TYPE   83   38
        clus
vv       17Q LOSS CNV 17Q LOSS WILD-TYPE
  CLUS_1            5                 83
  CLUS_2            0                 38
D66V7, multiclass
        clus
vv       17Q LOSS CNV 17Q LOSS WILD-TYPE
  CLUS_1            3                 47
  CLUS_2            2                 32
  CLUS_3            0                 42
D66V8, multiclass
        clus
vv       17Q LOSS CNV 17Q LOSS WILD-TYPE
  CLUS_1            3                 44
  CLUS_2            2                 39
  CLUS_3            0                 38

Clustering(67) Variable = 18p loss
D67V1, multiclass
        clus
vv       18P LOSS CNV 18P LOSS WILD-TYPE
  CLUS_1            4                 50
  CLUS_2            8                 35
  CLUS_3            5                 53
D67V2, multiclass
D67V3, multiclass
D67V4, multiclass
        clus
vv       18P LOSS CNV 18P LOSS WILD-TYPE
  CLUS_1            9                 38
  CLUS_2            7                 66
  CLUS_3            1                 19
D67V5, multiclass
        clus
vv       18P LOSS CNV 18P LOSS WILD-TYPE
  CLUS_1            1                 32
  CLUS_2            5                 38
  CLUS_3            2                 11
  CLUS_4            8                 29
D67V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  18P LOSS CNV          8    8
  18P LOSS WILD-TYPE   80   30
        clus
vv       18P LOSS CNV 18P LOSS WILD-TYPE
  CLUS_1            8                 80
  CLUS_2            8                 30
D67V7, multiclass
        clus
vv       18P LOSS CNV 18P LOSS WILD-TYPE
  CLUS_1            7                 43
  CLUS_2            1                 33
  CLUS_3            8                 34
D67V8, multiclass
        clus
vv       18P LOSS CNV 18P LOSS WILD-TYPE
  CLUS_1            3                 44
  CLUS_2            4                 37
  CLUS_3            9                 29

Clustering(68) Variable = 18q loss
D68V1, multiclass
        clus
vv       18Q LOSS CNV 18Q LOSS WILD-TYPE
  CLUS_1            7                 47
  CLUS_2           10                 33
  CLUS_3            9                 49
D68V2, multiclass
D68V3, multiclass
D68V4, multiclass
        clus
vv       18Q LOSS CNV 18Q LOSS WILD-TYPE
  CLUS_1           15                 32
  CLUS_2            8                 65
  CLUS_3            1                 19
D68V5, multiclass
        clus
vv       18Q LOSS CNV 18Q LOSS WILD-TYPE
  CLUS_1            2                 31
  CLUS_2            6                 37
  CLUS_3            3                 10
  CLUS_4           13                 24
D68V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  18Q LOSS CNV         11   13
  18Q LOSS WILD-TYPE   77   25
        clus
vv       18Q LOSS CNV 18Q LOSS WILD-TYPE
  CLUS_1           11                 77
  CLUS_2           13                 25
D68V7, multiclass
        clus
vv       18Q LOSS CNV 18Q LOSS WILD-TYPE
  CLUS_1            8                 42
  CLUS_2            3                 31
  CLUS_3           13                 29
D68V8, multiclass
        clus
vv       18Q LOSS CNV 18Q LOSS WILD-TYPE
  CLUS_1            4                 43
  CLUS_2            6                 35
  CLUS_3           14                 24

Clustering(69) Variable = 19p loss
D69V1, multiclass
        clus
vv       19P LOSS CNV 19P LOSS WILD-TYPE
  CLUS_1            4                 50
  CLUS_2            5                 38
  CLUS_3            3                 55
D69V2, multiclass
D69V3, multiclass
D69V4, multiclass
        clus
vv       19P LOSS CNV 19P LOSS WILD-TYPE
  CLUS_1            3                 44
  CLUS_2            5                 68
  CLUS_3            3                 17
D69V5, multiclass
        clus
vv       19P LOSS CNV 19P LOSS WILD-TYPE
  CLUS_1            2                 31
  CLUS_2            5                 38
  CLUS_3            0                 13
  CLUS_4            5                 32
D69V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  19P LOSS CNV          8    4
  19P LOSS WILD-TYPE   80   34
        clus
vv       19P LOSS CNV 19P LOSS WILD-TYPE
  CLUS_1            8                 80
  CLUS_2            4                 34
D69V7, multiclass
        clus
vv       19P LOSS CNV 19P LOSS WILD-TYPE
  CLUS_1            6                 44
  CLUS_2            1                 33
  CLUS_3            5                 37
D69V8, multiclass
        clus
vv       19P LOSS CNV 19P LOSS WILD-TYPE
  CLUS_1            1                 46
  CLUS_2            7                 34
  CLUS_3            4                 34

Clustering(70) Variable = 19q loss
D70V1, multiclass
        clus
vv       19Q LOSS CNV 19Q LOSS WILD-TYPE
  CLUS_1            3                 51
  CLUS_2            2                 41
  CLUS_3            1                 57
D70V2, multiclass
D70V3, multiclass
D70V4, multiclass
        clus
vv       19Q LOSS CNV 19Q LOSS WILD-TYPE
  CLUS_1            1                 46
  CLUS_2            3                 70
  CLUS_3            2                 18
D70V5, multiclass
        clus
vv       19Q LOSS CNV 19Q LOSS WILD-TYPE
  CLUS_1            1                 32
  CLUS_2            2                 41
  CLUS_3            0                 13
  CLUS_4            3                 34
D70V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  19Q LOSS CNV          3    3
  19Q LOSS WILD-TYPE   85   35
        clus
vv       19Q LOSS CNV 19Q LOSS WILD-TYPE
  CLUS_1            3                 85
  CLUS_2            3                 35
D70V7, multiclass
        clus
vv       19Q LOSS CNV 19Q LOSS WILD-TYPE
  CLUS_1            2                 48
  CLUS_2            1                 33
  CLUS_3            3                 39
D70V8, multiclass
        clus
vv       19Q LOSS CNV 19Q LOSS WILD-TYPE
  CLUS_1            1                 46
  CLUS_2            2                 39
  CLUS_3            3                 35

Clustering(71) Variable = 20p loss
D71V1, multiclass
        clus
vv       20P LOSS CNV 20P LOSS WILD-TYPE
  CLUS_1            3                 51
  CLUS_2            3                 40
  CLUS_3            2                 56
D71V2, multiclass
D71V3, multiclass
D71V4, multiclass
        clus
vv       20P LOSS CNV 20P LOSS WILD-TYPE
  CLUS_1            2                 45
  CLUS_2            4                 69
  CLUS_3            0                 20
D71V5, multiclass
        clus
vv       20P LOSS CNV 20P LOSS WILD-TYPE
  CLUS_1            1                 32
  CLUS_2            3                 40
  CLUS_3            0                 13
  CLUS_4            3                 34
D71V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  20P LOSS CNV          4    3
  20P LOSS WILD-TYPE   84   35
        clus
vv       20P LOSS CNV 20P LOSS WILD-TYPE
  CLUS_1            4                 84
  CLUS_2            3                 35
D71V7, multiclass
        clus
vv       20P LOSS CNV 20P LOSS WILD-TYPE
  CLUS_1            4                 46
  CLUS_2            0                 34
  CLUS_3            3                 39
D71V8, multiclass
        clus
vv       20P LOSS CNV 20P LOSS WILD-TYPE
  CLUS_1            1                 46
  CLUS_2            3                 38
  CLUS_3            3                 35

Clustering(72) Variable = 21q loss
D72V1, multiclass
        clus
vv       21Q LOSS CNV 21Q LOSS WILD-TYPE
  CLUS_1            6                 48
  CLUS_2            6                 37
  CLUS_3            1                 57
D72V2, multiclass
D72V3, multiclass
D72V4, multiclass
        clus
vv       21Q LOSS CNV 21Q LOSS WILD-TYPE
  CLUS_1            6                 41
  CLUS_2            3                 70
  CLUS_3            3                 17
D72V5, multiclass
        clus
vv       21Q LOSS CNV 21Q LOSS WILD-TYPE
  CLUS_1            5                 28
  CLUS_2            4                 39
  CLUS_3            0                 13
  CLUS_4            3                 34
D72V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  21Q LOSS CNV          9    3
  21Q LOSS WILD-TYPE   79   35
        clus
vv       21Q LOSS CNV 21Q LOSS WILD-TYPE
  CLUS_1            9                 79
  CLUS_2            3                 35
D72V7, multiclass
        clus
vv       21Q LOSS CNV 21Q LOSS WILD-TYPE
  CLUS_1            6                 44
  CLUS_2            3                 31
  CLUS_3            3                 39
D72V8, multiclass
        clus
vv       21Q LOSS CNV 21Q LOSS WILD-TYPE
  CLUS_1            5                 42
  CLUS_2            4                 37
  CLUS_3            3                 35

Clustering(73) Variable = 22q loss
D73V1, multiclass
        clus
vv       22Q LOSS CNV 22Q LOSS WILD-TYPE
  CLUS_1            6                 48
  CLUS_2            5                 38
  CLUS_3            6                 52
D73V2, multiclass
D73V3, multiclass
D73V4, multiclass
        clus
vv       22Q LOSS CNV 22Q LOSS WILD-TYPE
  CLUS_1            9                 38
  CLUS_2            7                 66
  CLUS_3            1                 19
D73V5, multiclass
        clus
vv       22Q LOSS CNV 22Q LOSS WILD-TYPE
  CLUS_1            2                 31
  CLUS_2            5                 38
  CLUS_3            2                 11
  CLUS_4            4                 33
D73V6, binary
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  22Q LOSS CNV          9    4
  22Q LOSS WILD-TYPE   79   34
        clus
vv       22Q LOSS CNV 22Q LOSS WILD-TYPE
  CLUS_1            9                 79
  CLUS_2            4                 34
D73V7, multiclass
        clus
vv       22Q LOSS CNV 22Q LOSS WILD-TYPE
  CLUS_1            3                 47
  CLUS_2            4                 30
  CLUS_3            6                 36
D73V8, multiclass
        clus
vv       22Q LOSS CNV 22Q LOSS WILD-TYPE
  CLUS_1            4                 43
  CLUS_2            5                 36
  CLUS_3            4                 34

Clustering(74) Variable = Xq loss
D74V1, multiclass
        clus
vv       XQ LOSS CNV XQ LOSS WILD-TYPE
  CLUS_1           1                53
  CLUS_2           0                43
  CLUS_3           2                56
D74V2, multiclass
D74V3, multiclass
D74V4, multiclass
        clus
vv       XQ LOSS CNV XQ LOSS WILD-TYPE
  CLUS_1           0                47
  CLUS_2           3                70
  CLUS_3           0                20
D74V5, multiclass
[1] "Remove cluster labels:" "XQ LOSS CNV"           
clus
      XQ LOSS CNV XQ LOSS WILD-TYPE 
                2               124 
       TCGA-BI-A0VR        TCGA-BI-A0VS        TCGA-BI-A20A        TCGA-C5-A0TN 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A1BE        TCGA-C5-A1BF        TCGA-C5-A1BI        TCGA-C5-A1BJ 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A1BK        TCGA-C5-A1BL        TCGA-C5-A1BM        TCGA-C5-A1BN 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A1M5        TCGA-C5-A1M6        TCGA-C5-A1M7        TCGA-C5-A1M8 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A1M9        TCGA-C5-A1ME        TCGA-C5-A1MF        TCGA-C5-A1MH 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A1MI        TCGA-C5-A1MJ        TCGA-C5-A1MK        TCGA-C5-A1ML 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A1MN        TCGA-C5-A1MP        TCGA-C5-A2LS        TCGA-C5-A2LT 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A2LV        TCGA-C5-A2LX        TCGA-C5-A2LY        TCGA-C5-A2LZ 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A2M1        TCGA-C5-A2M2        TCGA-C5-A3HD        TCGA-C5-A3HE 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A3HF        TCGA-C5-A3HL        TCGA-DG-A2KH        TCGA-DG-A2KJ 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-DG-A2KK        TCGA-DG-A2KL        TCGA-DG-A2KM        TCGA-DR-A0ZL 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-DR-A0ZM        TCGA-DS-A0VL        TCGA-DS-A0VM        TCGA-DS-A0VN 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-DS-A3LQ        TCGA-EA-A1QS        TCGA-EA-A1QT        TCGA-EA-A3HQ 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EA-A3HR        TCGA-EA-A3HS        TCGA-EA-A3HT        TCGA-EA-A3QD 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EA-A3QE        TCGA-EA-A3Y4        TCGA-EA-A410        TCGA-EA-A411 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EA-A439        TCGA-EA-A43B        TCGA-EK-A2GZ        TCGA-EK-A2H0 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EK-A2H1        TCGA-EK-A2IP        TCGA-EK-A2PG        TCGA-EK-A2PI 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EK-A2PK        TCGA-EK-A2PL        TCGA-EK-A2PM        TCGA-EK-A2R7 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EK-A2R8        TCGA-EK-A2R9        TCGA-EK-A2RA        TCGA-EK-A2RB 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EK-A2RC        TCGA-EK-A2RD        TCGA-EK-A2RE        TCGA-EK-A2RJ 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EK-A2RK        TCGA-EK-A2RL        TCGA-EK-A2RM        TCGA-EK-A2RN 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EK-A2RO        TCGA-EK-A3GJ        TCGA-EK-A3GK        TCGA-EK-A3GM 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EK-A3GN        TCGA-EX-A1H5        TCGA-EX-A1H6        TCGA-EX-A3L1 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EX-A449        TCGA-FU-A23K        TCGA-FU-A23L        TCGA-FU-A2QG 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-FU-A3EO        TCGA-FU-A3HY        TCGA-FU-A3HZ        TCGA-FU-A3NI 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-FU-A3TQ        TCGA-FU-A3TX        TCGA-FU-A3WB        TCGA-FU-A3YQ 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-FU-A40J        TCGA-HG-A2PA        TCGA-HM-A3JJ        TCGA-HM-A3JK 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-IR-A3L7        TCGA-IR-A3LA        TCGA-IR-A3LB        TCGA-IR-A3LC 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-IR-A3LF        TCGA-IR-A3LH        TCGA-IR-A3LI        TCGA-IR-A3LK 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-IR-A3LL        TCGA-JX-A3PZ        TCGA-JX-A3Q0        TCGA-JX-A3Q8 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-LP-A4AU        TCGA-LP-A4AV        TCGA-LP-A4AW        TCGA-LP-A4AX 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
D74V6, binary
[1] "tbl2"
                   cls
clus                [,1] [,2]
  XQ LOSS CNV          2    0
  XQ LOSS WILD-TYPE   86   38
        clus
vv       XQ LOSS CNV XQ LOSS WILD-TYPE
  CLUS_1           2                86
  CLUS_2           0                38
D74V7, multiclass
[1] "Remove cluster labels:" "XQ LOSS CNV"           
clus
      XQ LOSS CNV XQ LOSS WILD-TYPE 
                2               124 
       TCGA-BI-A0VR        TCGA-BI-A0VS        TCGA-BI-A20A        TCGA-C5-A0TN 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A1BE        TCGA-C5-A1BF        TCGA-C5-A1BI        TCGA-C5-A1BJ 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A1BK        TCGA-C5-A1BL        TCGA-C5-A1BM        TCGA-C5-A1BN 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A1M5        TCGA-C5-A1M6        TCGA-C5-A1M7        TCGA-C5-A1M8 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A1M9        TCGA-C5-A1ME        TCGA-C5-A1MF        TCGA-C5-A1MH 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A1MI        TCGA-C5-A1MJ        TCGA-C5-A1MK        TCGA-C5-A1ML 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A1MN        TCGA-C5-A1MP        TCGA-C5-A2LS        TCGA-C5-A2LT 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A2LV        TCGA-C5-A2LX        TCGA-C5-A2LY        TCGA-C5-A2LZ 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A2M1        TCGA-C5-A2M2        TCGA-C5-A3HD        TCGA-C5-A3HE 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A3HF        TCGA-C5-A3HL        TCGA-DG-A2KH        TCGA-DG-A2KJ 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-DG-A2KK        TCGA-DG-A2KL        TCGA-DG-A2KM        TCGA-DR-A0ZL 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-DR-A0ZM        TCGA-DS-A0VL        TCGA-DS-A0VM        TCGA-DS-A0VN 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-DS-A3LQ        TCGA-EA-A1QS        TCGA-EA-A1QT        TCGA-EA-A3HQ 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EA-A3HR        TCGA-EA-A3HS        TCGA-EA-A3HT        TCGA-EA-A3QD 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EA-A3QE        TCGA-EA-A3Y4        TCGA-EA-A410        TCGA-EA-A411 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EA-A439        TCGA-EA-A43B        TCGA-EK-A2GZ        TCGA-EK-A2H0 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EK-A2H1        TCGA-EK-A2IP        TCGA-EK-A2PG        TCGA-EK-A2PI 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EK-A2PK        TCGA-EK-A2PL        TCGA-EK-A2PM        TCGA-EK-A2R7 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EK-A2R8        TCGA-EK-A2R9        TCGA-EK-A2RA        TCGA-EK-A2RB 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EK-A2RC        TCGA-EK-A2RD        TCGA-EK-A2RE        TCGA-EK-A2RJ 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EK-A2RK        TCGA-EK-A2RL        TCGA-EK-A2RM        TCGA-EK-A2RN 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EK-A2RO        TCGA-EK-A3GJ        TCGA-EK-A3GK        TCGA-EK-A3GM 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EK-A3GN        TCGA-EX-A1H5        TCGA-EX-A1H6        TCGA-EX-A3L1 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EX-A449        TCGA-FU-A23K        TCGA-FU-A23L        TCGA-FU-A2QG 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-FU-A3EO        TCGA-FU-A3HY        TCGA-FU-A3HZ        TCGA-FU-A3NI 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-FU-A3TQ        TCGA-FU-A3TX        TCGA-FU-A3WB        TCGA-FU-A3YQ 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-FU-A40J        TCGA-HG-A2PA        TCGA-HM-A3JJ        TCGA-HM-A3JK 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-IR-A3L7        TCGA-IR-A3LA        TCGA-IR-A3LB        TCGA-IR-A3LC 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-IR-A3LF        TCGA-IR-A3LH        TCGA-IR-A3LI        TCGA-IR-A3LK 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-IR-A3LL        TCGA-JX-A3PZ        TCGA-JX-A3Q0        TCGA-JX-A3Q8 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-LP-A4AU        TCGA-LP-A4AV        TCGA-LP-A4AW        TCGA-LP-A4AX 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
D74V8, multiclass
[1] "Remove cluster labels:" "XQ LOSS CNV"           
clus
      XQ LOSS CNV XQ LOSS WILD-TYPE 
                2               124 
       TCGA-BI-A0VR        TCGA-BI-A0VS        TCGA-BI-A20A        TCGA-C5-A0TN 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A1BE        TCGA-C5-A1BF        TCGA-C5-A1BI        TCGA-C5-A1BJ 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A1BK        TCGA-C5-A1BL        TCGA-C5-A1BM        TCGA-C5-A1BN 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A1M5        TCGA-C5-A1M6        TCGA-C5-A1M7        TCGA-C5-A1M8 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A1M9        TCGA-C5-A1ME        TCGA-C5-A1MF        TCGA-C5-A1MH 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A1MI        TCGA-C5-A1MJ        TCGA-C5-A1MK        TCGA-C5-A1ML 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A1MN        TCGA-C5-A1MP        TCGA-C5-A2LS        TCGA-C5-A2LT 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A2LV        TCGA-C5-A2LX        TCGA-C5-A2LY        TCGA-C5-A2LZ 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A2M1        TCGA-C5-A2M2        TCGA-C5-A3HD        TCGA-C5-A3HE 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-C5-A3HF        TCGA-C5-A3HL        TCGA-DG-A2KH        TCGA-DG-A2KJ 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-DG-A2KK        TCGA-DG-A2KL        TCGA-DG-A2KM        TCGA-DR-A0ZL 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-DR-A0ZM        TCGA-DS-A0VL        TCGA-DS-A0VM        TCGA-DS-A0VN 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-DS-A3LQ        TCGA-EA-A1QS        TCGA-EA-A1QT        TCGA-EA-A3HQ 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EA-A3HR        TCGA-EA-A3HS        TCGA-EA-A3HT        TCGA-EA-A3QD 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EA-A3QE        TCGA-EA-A3Y4        TCGA-EA-A410        TCGA-EA-A411 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EA-A439        TCGA-EA-A43B        TCGA-EK-A2GZ        TCGA-EK-A2H0 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EK-A2H1        TCGA-EK-A2IP        TCGA-EK-A2PG        TCGA-EK-A2PI 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EK-A2PK        TCGA-EK-A2PL        TCGA-EK-A2PM        TCGA-EK-A2R7 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EK-A2R8        TCGA-EK-A2R9        TCGA-EK-A2RA        TCGA-EK-A2RB 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EK-A2RC        TCGA-EK-A2RD        TCGA-EK-A2RE        TCGA-EK-A2RJ 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EK-A2RK        TCGA-EK-A2RL        TCGA-EK-A2RM        TCGA-EK-A2RN 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EK-A2RO        TCGA-EK-A3GJ        TCGA-EK-A3GK        TCGA-EK-A3GM 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EK-A3GN        TCGA-EX-A1H5        TCGA-EX-A1H6        TCGA-EX-A3L1 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-EX-A449        TCGA-FU-A23K        TCGA-FU-A23L        TCGA-FU-A2QG 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-FU-A3EO        TCGA-FU-A3HY        TCGA-FU-A3HZ        TCGA-FU-A3NI 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-FU-A3TQ        TCGA-FU-A3TX        TCGA-FU-A3WB        TCGA-FU-A3YQ 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-FU-A40J        TCGA-HG-A2PA        TCGA-HM-A3JJ        TCGA-HM-A3JK 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-IR-A3L7        TCGA-IR-A3LA        TCGA-IR-A3LB        TCGA-IR-A3LC 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-IR-A3LF        TCGA-IR-A3LH        TCGA-IR-A3LI        TCGA-IR-A3LK 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-IR-A3LL        TCGA-JX-A3PZ        TCGA-JX-A3Q0        TCGA-JX-A3Q8 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-LP-A4AU        TCGA-LP-A4AV        TCGA-LP-A4AW        TCGA-LP-A4AX 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
                           V1                            V2 
                    "CN_CNMF"            "METHLYATION_CNMF" 
                           V3                            V4 
               "MRNASEQ_CNMF"       "MRNASEQ_CHIERARCHICAL" 
                           V5                            V6 
                "MIRSEQ_CNMF"        "MIRSEQ_CHIERARCHICAL" 
                           V7                            V8 
         "MIRSEQ_MATURE_CNMF" "MIRSEQ_MATURE_CHIERARCHICAL" 
> q(save="no")
