		Clinical Features	Time to Death		AGE		PRIMARY.SITE.OF.DISEASE		NEOPLASM.DISEASESTAGE		PATHOLOGY.T.STAGE		PATHOLOGY.N.STAGE		PATHOLOGY.M.STAGE		GENDER		HISTOLOGICAL.TYPE		RADIATIONS.RADIATION.REGIMENINDICATION		COMPLETENESS.OF.RESECTION		NUMBER.OF.LYMPH.NODES	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q
1P GAIN MUTATION ANALYSIS	41 (7%)	542	0.88851	1	0.53541	1	0.85499	1	0.44102	1	0.80088	1	0.51845	1	0.64279	1	0.41707	1	0.087521	1	0.48367	1	0.10226	1	0.13319	1
1Q GAIN MUTATION ANALYSIS	111 (19%)	472	0.7799	1	0.43647	1	0.34205	1	0.14008	1	0.075389	1	0.065218	1	0.064282	1	0.39763	1	0.26864	1	0.68295	1	0.26536	1	0.0057839	1
2P GAIN MUTATION ANALYSIS	104 (18%)	479	0.65211	1	0.54729	1	0.27787	1	0.14822	1	0.41934	1	0.095976	1	0.40725	1	0.44798	1	0.017442	1	0.66552	1	0.036577	1	0.65654	1
2Q GAIN MUTATION ANALYSIS	101 (17%)	482	0.26535	1	0.21968	1	0.14085	1	0.12185	1	0.50145	1	0.040514	1	0.59296	1	0.38084	1	0.012342	1	0.65841	1	0.3841	1	0.52026	1
3P GAIN MUTATION ANALYSIS	65 (11%)	518	0.52603	1	0.13999	1	0.036775	1	0.027234	1	1	1	0.21888	1	0.0012122	1	0.50976	1	0.079695	1	1	1	0.81743	1	0.18705	1
3Q GAIN MUTATION ANALYSIS	89 (15%)	494	0.11343	1	0.21352	1	0.027186	1	0.039172	1	0.90178	1	0.035851	1	0.00030065	0.282	0.72945	1	0.028637	1	0.63302	1	0.4439	1	0.16321	1
4P GAIN MUTATION ANALYSIS	14 (2%)	569	0.76051	1	0.84676	1	0.027796	1	0.41151	1	0.51192	1	0.49396	1	0.20573	1	0.58926	1	0.071906	1	1	1	1	1	0.020246	1
4Q GAIN MUTATION ANALYSIS	15 (3%)	568	0.24587	1	0.47467	1	1	1	0.93021	1	0.85933	1	0.36245	1	0.55526	1	0.79437	1	0.75539	1	1	1	0.42156	1	0.62295	1
5P GAIN MUTATION ANALYSIS	93 (16%)	490	0.8244	1	0.14801	1	0.25651	1	0.22832	1	0.72844	1	0.03064	1	0.55902	1	0.90976	1	0.14906	1	0.64085	1	0.11866	1	0.18045	1
5Q GAIN MUTATION ANALYSIS	59 (10%)	524	0.89271	1	0.95797	1	0.16532	1	0.72414	1	0.53152	1	0.35474	1	0.91123	1	0.58266	1	0.15075	1	1	1	0.15287	1	0.81708	1
6P GAIN MUTATION ANALYSIS	117 (20%)	466	0.37365	1	0.72174	1	0.16098	1	0.24251	1	0.5274	1	0.000986	0.906	0.43207	1	0.40799	1	0.11747	1	0.00028283	0.266	0.27462	1	0.023713	1
6Q GAIN MUTATION ANALYSIS	105 (18%)	478	0.61015	1	0.723	1	0.27347	1	0.10451	1	0.75244	1	0.0058245	1	0.17043	1	0.59044	1	0.064324	1	0.00013553	0.128	0.33306	1	0.095482	1
7P GAIN MUTATION ANALYSIS	333 (57%)	250	0.48648	1	0.39035	1	0.18898	1	0.00021982	0.207	0.84312	1	2.3302e-05	0.0221	0.023396	1	0.73744	1	0.00062395	0.58	0.31267	1	0.25853	1	0.014632	1
7Q GAIN MUTATION ANALYSIS	299 (51%)	284	0.38422	1	0.35061	1	0.35167	1	0.00086282	0.796	0.61606	1	0.0011837	1	0.020761	1	0.73967	1	0.0016987	1	0.50573	1	0.40282	1	0.050729	1
8P GAIN MUTATION ANALYSIS	164 (28%)	419	0.32219	1	0.57614	1	0.35236	1	0.48726	1	0.80739	1	0.33509	1	0.69694	1	0.78179	1	0.55135	1	0.27733	1	0.13554	1	0.30645	1
8Q GAIN MUTATION ANALYSIS	294 (50%)	289	0.44986	1	0.26772	1	0.40377	1	0.40317	1	0.2949	1	0.2549	1	0.40993	1	1	1	0.027443	1	0.037683	1	0.14887	1	0.56916	1
9P GAIN MUTATION ANALYSIS	113 (19%)	470	0.15041	1	0.73978	1	0.045319	1	0.013256	1	0.69906	1	0.088873	1	0.80535	1	1	1	0.017217	1	1	1	0.26576	1	0.13043	1
9Q GAIN MUTATION ANALYSIS	95 (16%)	488	0.26902	1	0.80667	1	0.2575	1	0.02433	1	0.56876	1	0.25213	1	0.97448	1	0.57413	1	0.092721	1	1	1	0.56729	1	0.29362	1
10P GAIN MUTATION ANALYSIS	43 (7%)	540	0.12881	1	0.59421	1	0.86038	1	0.71577	1	0.21287	1	0.055078	1	0.48309	1	0.75278	1	0.88064	1	0.50069	1	0.57107	1	0.23401	1
10Q GAIN MUTATION ANALYSIS	24 (4%)	559	0.6849	1	0.037905	1	1	1	0.34925	1	0.5129	1	0.0089181	1	0.71262	1	0.83504	1	0.91504	1	0.31683	1	0.66028	1	0.071585	1
11P GAIN MUTATION ANALYSIS	76 (13%)	507	0.92863	1	0.010531	1	0.051488	1	0.50122	1	0.26801	1	0.44294	1	0.18392	1	1	1	0.00029362	0.276	0.10005	1	0.39921	1	0.35045	1
11Q GAIN MUTATION ANALYSIS	72 (12%)	511	0.75603	1	0.00064573	0.599	0.25902	1	0.5768	1	0.72377	1	0.57104	1	0.040415	1	0.89996	1	0.0013445	1	0.30744	1	0.46587	1	0.69823	1
12P GAIN MUTATION ANALYSIS	122 (21%)	461	0.48886	1	0.041386	1	1	1	0.2014	1	0.31687	1	0.13289	1	0.20176	1	1	1	0.767	1	0.40466	1	0.78561	1	0.68164	1
12Q GAIN MUTATION ANALYSIS	103 (18%)	480	0.84658	1	0.0074679	1	0.088143	1	0.048359	1	0.44166	1	0.0097677	1	0.052832	1	0.82782	1	0.22601	1	0.37254	1	0.66999	1	0.0030843	1
13Q GAIN MUTATION ANALYSIS	349 (60%)	234	0.16376	1	0.2385	1	0.057796	1	0.008221	1	0.74464	1	0.0004097	0.382	0.047347	1	0.27163	1	1.3242e-08	1.27e-05	0.74672	1	0.087551	1	0.67898	1
14Q GAIN MUTATION ANALYSIS	43 (7%)	540	0.59909	1	0.92977	1	0.37742	1	0.79545	1	0.92635	1	0.59696	1	0.00023141	0.218	0.63428	1	0.37396	1	0.13747	1	0.59658	1	0.2202	1
15Q GAIN MUTATION ANALYSIS	17 (3%)	566	0.81929	1	0.14755	1	0.78919	1	0.50164	1	0.046911	1	0.49489	1	0.39778	1	0.013227	1	0.12736	1	0.23525	1	0.18829	1	0.35532	1
16P GAIN MUTATION ANALYSIS	138 (24%)	445	0.68554	1	0.18877	1	1	1	0.025171	1	0.9946	1	0.0020426	1	0.26047	1	0.55899	1	0.0035766	1	0.44811	1	0.7415	1	0.21223	1
16Q GAIN MUTATION ANALYSIS	134 (23%)	449	0.99118	1	0.097638	1	0.74092	1	0.0088368	1	0.99441	1	0.00089593	0.825	0.23162	1	0.4897	1	0.0050451	1	0.43617	1	0.72813	1	0.45289	1
17P GAIN MUTATION ANALYSIS	30 (5%)	553	0.1262	1	0.68311	1	0.8337	1	0.76582	1	0.58529	1	0.78886	1	0.17865	1	1	1	0.79349	1	1	1	0.83623	1	0.59533	1
17Q GAIN MUTATION ANALYSIS	101 (17%)	482	0.33912	1	0.23602	1	0.90287	1	0.1854	1	0.80197	1	0.31911	1	0.012298	1	0.7425	1	0.50809	1	1	1	0.27408	1	0.31369	1
18P GAIN MUTATION ANALYSIS	31 (5%)	552	0.98391	1	0.7398	1	0.83751	1	0.00082023	0.758	0.80176	1	0.051845	1	0.00085111	0.786	0.4605	1	0.023782	1	0.39058	1	1	1	0.069194	1
18Q GAIN MUTATION ANALYSIS	19 (3%)	564	0.39836	1	0.25225	1	1	1	0.17218	1	0.35391	1	0.083916	1	0.6922	1	0.2441	1	0.051245	1	0.2594	1	0.61255	1	0.17933	1
19P GAIN MUTATION ANALYSIS	91 (16%)	492	0.3526	1	0.82998	1	0.61031	1	0.76657	1	0.95927	1	0.1191	1	0.19149	1	0.17097	1	0.082792	1	1	1	0.33696	1	0.41512	1
19Q GAIN MUTATION ANALYSIS	100 (17%)	483	0.22398	1	0.96755	1	0.71265	1	0.70758	1	0.72128	1	0.20261	1	0.11218	1	0.5092	1	0.29422	1	1	1	0.47123	1	0.55211	1
20P GAIN MUTATION ANALYSIS	337 (58%)	246	0.23714	1	0.93128	1	0.0047246	1	0.00034927	0.327	0.69895	1	0.033898	1	0.0018775	1	0.064912	1	3.0039e-06	0.00286	0.31482	1	0.042795	1	0.34437	1
20Q GAIN MUTATION ANALYSIS	441 (76%)	142	0.4844	1	0.41682	1	4.065e-06	0.00386	0.00054867	0.51	0.22398	1	0.0037808	1	0.0027582	1	0.33387	1	2.2345e-12	2.14e-09	0.69519	1	0.023314	1	0.35045	1
21Q GAIN MUTATION ANALYSIS	31 (5%)	552	0.20101	1	0.036216	1	0.5284	1	0.95002	1	0.23839	1	0.68578	1	0.8513	1	0.85453	1	0.67624	1	1	1	0.75624	1	0.55879	1
22Q GAIN MUTATION ANALYSIS	22 (4%)	561	0.97704	1	0.34145	1	0.084286	1	0.89208	1	0.29726	1	0.39685	1	0.35903	1	1	1	0.10905	1	0.29435	1	0.31508	1	0.26278	1
XQ GAIN MUTATION ANALYSIS	104 (18%)	479	0.71536	1	0.17529	1	0.54301	1	0.1628	1	0.65577	1	0.42554	1	0.17584	1	0.32919	1	0.13435	1	1	1	0.90561	1	0.81249	1
1P LOSS MUTATION ANALYSIS	125 (21%)	458	0.14732	1	0.88658	1	0.14173	1	0.040203	1	0.76281	1	0.0022074	1	0.0048295	1	0.76163	1	0.029534	1	0.41185	1	0.34086	1	0.0091283	1
1Q LOSS MUTATION ANALYSIS	67 (11%)	516	0.2151	1	0.66635	1	0.30946	1	0.40497	1	0.73949	1	0.019328	1	0.040417	1	0.12047	1	0.30791	1	0.07342	1	0.37042	1	0.21321	1
2P LOSS MUTATION ANALYSIS	17 (3%)	566	0.80754	1	0.10359	1	0.0012494	1	0.76253	1	0.84995	1	0.89166	1	0.83956	1	0.80652	1	0.01373	1	0.23525	1	1	1	0.95648	1
2Q LOSS MUTATION ANALYSIS	14 (2%)	569	0.36131	1	0.41627	1	0.069424	1	0.51593	1	0.80414	1	1	1	0.6269	1	1	1	0.30552	1	0.19772	1	1	1	0.90719	1
3P LOSS MUTATION ANALYSIS	61 (10%)	522	0.066826	1	0.96213	1	0.54171	1	0.033908	1	0.022451	1	0.054984	1	0.0016995	1	0.41704	1	0.088571	1	0.24069	1	0.10222	1	0.10175	1
3Q LOSS MUTATION ANALYSIS	38 (7%)	545	0.49101	1	0.45252	1	0.84909	1	0.083349	1	0.087726	1	0.56081	1	0.18491	1	0.24324	1	0.0081225	1	0.11146	1	0.29869	1	0.41684	1
4P LOSS MUTATION ANALYSIS	181 (31%)	402	0.25641	1	0.69688	1	0.19027	1	0.013694	1	0.72047	1	0.0013677	1	0.0050648	1	0.5301	1	0.018664	1	0.00051048	0.475	0.12336	1	0.0096172	1
4Q LOSS MUTATION ANALYSIS	175 (30%)	408	0.57243	1	0.98244	1	0.0057243	1	0.096709	1	0.58655	1	0.0069343	1	0.24907	1	0.58808	1	0.0051297	1	0.0003926	0.367	0.85151	1	0.028417	1
5P LOSS MUTATION ANALYSIS	75 (13%)	508	0.53275	1	0.22574	1	0.26683	1	0.10784	1	0.80993	1	0.0063747	1	0.41451	1	0.62048	1	0.32282	1	0.019251	1	0.26976	1	0.038614	1
5Q LOSS MUTATION ANALYSIS	109 (19%)	474	0.18319	1	0.42741	1	0.042344	1	0.089588	1	0.5441	1	0.0033607	1	0.12179	1	0.91561	1	0.04665	1	0.0019473	1	0.48682	1	0.025616	1
6P LOSS MUTATION ANALYSIS	46 (8%)	537	0.1176	1	0.28823	1	0.7297	1	0.80444	1	0.21235	1	0.35238	1	0.61396	1	0.53913	1	0.15079	1	0.52529	1	0.073397	1	0.20827	1
6Q LOSS MUTATION ANALYSIS	68 (12%)	515	0.12421	1	0.9737	1	0.38404	1	0.080713	1	0.10872	1	0.17819	1	0.043006	1	0.30064	1	0.044195	1	1	1	0.194	1	0.061964	1
7P LOSS MUTATION ANALYSIS	4 (1%)	579	0.65414	1	0.25739	1	0.065106	1	0.93184	1	1	1	0.38525	1	0.87368	1	1	1	0.053294	1	1	1	1	1	2.9053e-25	2.79e-22
7Q LOSS MUTATION ANALYSIS	5 (1%)	578	0.54549	1	0.76923	1	0.13022	1	0.78934	1	0.42195	1	0.83185	1	0.82023	1	0.6668	1	0.094861	1	1	1	1	1	2.1657e-06	0.00206
8P LOSS MUTATION ANALYSIS	203 (35%)	380	0.86672	1	0.81019	1	0.0012375	1	0.064052	1	0.2342	1	0.00075245	0.697	0.096501	1	0.2973	1	0.00094202	0.867	0.28834	1	0.24456	1	0.0012436	1
8Q LOSS MUTATION ANALYSIS	36 (6%)	547	0.91629	1	0.96758	1	0.44176	1	0.21404	1	0.47972	1	0.14424	1	0.14993	1	0.057912	1	0.55203	1	1	1	0.68312	1	0.11375	1
9P LOSS MUTATION ANALYSIS	70 (12%)	513	0.037081	1	0.32281	1	0.56677	1	0.86036	1	0.11155	1	0.50795	1	0.25775	1	0.30686	1	0.39495	1	1	1	0.03725	1	0.34789	1
9Q LOSS MUTATION ANALYSIS	69 (12%)	514	0.021139	1	0.03165	1	0.66314	1	0.70235	1	0.1186	1	0.46069	1	0.20973	1	0.70001	1	0.21689	1	1	1	0.03725	1	0.80895	1
10P LOSS MUTATION ANALYSIS	93 (16%)	490	0.23073	1	0.0057014	1	0.097775	1	0.26202	1	0.94944	1	0.01321	1	0.23769	1	0.82159	1	0.025253	1	0.00079601	0.736	1	1	0.16091	1
10Q LOSS MUTATION ANALYSIS	100 (17%)	483	0.19819	1	0.0086409	1	0.0353	1	0.58836	1	1	1	0.10639	1	0.54655	1	0.82589	1	0.017081	1	0.001201	1	0.97058	1	0.3407	1
11P LOSS MUTATION ANALYSIS	72 (12%)	511	0.77208	1	0.37159	1	0.32284	1	0.46562	1	0.32016	1	0.01045	1	0.03319	1	0.80106	1	0.21732	1	0.087727	1	0.70243	1	0.017449	1
11Q LOSS MUTATION ANALYSIS	85 (15%)	498	0.44895	1	0.39676	1	0.34746	1	0.65996	1	0.40262	1	0.032237	1	0.40704	1	0.72507	1	0.11727	1	0.029733	1	0.94501	1	0.116	1
12P LOSS MUTATION ANALYSIS	59 (10%)	524	0.34928	1	0.71207	1	0.064102	1	0.73963	1	0.25262	1	0.055923	1	0.30298	1	0.49287	1	0.0030683	1	0.22872	1	0.94119	1	0.65991	1
12Q LOSS MUTATION ANALYSIS	61 (10%)	522	0.56046	1	0.96795	1	0.17149	1	0.63273	1	0.41307	1	0.1027	1	0.17566	1	0.68479	1	0.060697	1	0.24069	1	1	1	0.59963	1
13Q LOSS MUTATION ANALYSIS	19 (3%)	564	0.33219	1	0.96032	1	0.18854	1	0.60781	1	0.6625	1	0.012117	1	0.64518	1	1	1	0.024154	1	1	1	1	1	0.080302	1
14Q LOSS MUTATION ANALYSIS	187 (32%)	396	0.14626	1	0.64612	1	0.028186	1	0.44704	1	0.46385	1	0.014008	1	0.10183	1	0.53455	1	1.9836e-06	0.00189	0.7256	1	0.90588	1	0.89389	1
15Q LOSS MUTATION ANALYSIS	209 (36%)	374	0.44496	1	0.69287	1	0.051571	1	0.044868	1	0.26275	1	0.014331	1	0.21061	1	0.54472	1	0.0045935	1	0.012359	1	0.37721	1	0.045614	1
16P LOSS MUTATION ANALYSIS	31 (5%)	552	0.071272	1	0.85512	1	0.83751	1	0.12623	1	0.48175	1	0.82089	1	0.94156	1	0.19797	1	0.40486	1	1	1	0.56528	1	0.70594	1
16Q LOSS MUTATION ANALYSIS	36 (6%)	547	0.23681	1	0.76111	1	0.12411	1	0.48827	1	0.87638	1	0.32068	1	0.92254	1	0.73082	1	0.34059	1	0.43884	1	0.92903	1	0.16986	1
17P LOSS MUTATION ANALYSIS	319 (55%)	264	0.29485	1	0.1414	1	0.019785	1	0.0092019	1	0.58137	1	0.0017874	1	0.023527	1	0.27855	1	3.0071e-06	0.00286	0.19386	1	0.072557	1	0.0069004	1
17Q LOSS MUTATION ANALYSIS	83 (14%)	500	0.70134	1	0.6454	1	0.35243	1	0.092835	1	0.27089	1	0.026528	1	0.28239	1	0.34183	1	0.65389	1	0.6228	1	0.7997	1	0.074893	1
18P LOSS MUTATION ANALYSIS	357 (61%)	226	0.74143	1	0.17117	1	1.5916e-06	0.00152	0.00033746	0.316	0.85124	1	0.002101	1	0.00063689	0.591	0.4955	1	9.8129e-16	9.4e-13	0.16401	1	0.023617	1	0.098655	1
18Q LOSS MUTATION ANALYSIS	385 (66%)	198	0.75502	1	0.11569	1	1.4669e-08	1.4e-05	6.9101e-05	0.0654	0.33693	1	0.00015026	0.142	0.00028722	0.27	0.59904	1	4.3944e-16	4.21e-13	0.28538	1	0.024497	1	0.10776	1
19P LOSS MUTATION ANALYSIS	63 (11%)	520	0.25677	1	0.5949	1	0.023094	1	0.00037723	0.353	0.89894	1	0.0014274	1	0.0051926	1	0.6887	1	0.073154	1	0.25272	1	0.48708	1	0.0038216	1
19Q LOSS MUTATION ANALYSIS	52 (9%)	531	0.66447	1	0.66508	1	0.069237	1	0.00042593	0.397	0.95878	1	0.0034628	1	0.021033	1	0.30782	1	0.18878	1	0.18763	1	0.79367	1	0.010424	1
20P LOSS MUTATION ANALYSIS	62 (11%)	521	0.80449	1	0.43559	1	0.36279	1	0.84252	1	0.81693	1	0.71499	1	0.80761	1	0.59075	1	0.33509	1	0.60752	1	0.60854	1	0.88385	1
20Q LOSS MUTATION ANALYSIS	6 (1%)	577	0.09272	1	0.020349	1	0.19545	1	0.85688	1	0.51116	1	0.38964	1	0.86327	1	0.69101	1	0.41458	1	1	1	1	1	0.96987	1
21Q LOSS MUTATION ANALYSIS	178 (31%)	405	0.67611	1	0.55449	1	0.0045908	1	0.34575	1	0.91195	1	0.0089774	1	0.71398	1	0.78741	1	0.0021696	1	0.46604	1	0.78278	1	0.0013589	1
22Q LOSS MUTATION ANALYSIS	186 (32%)	397	0.068893	1	0.7114	1	0.61862	1	0.010875	1	0.31161	1	2.9284e-05	0.0277	0.021662	1	1	1	0.024032	1	0.4762	1	0.60054	1	0.021616	1
XQ LOSS MUTATION ANALYSIS	76 (13%)	507	0.61477	1	0.31933	1	0.16483	1	0.16991	1	0.90458	1	0.19832	1	0.0315	1	1	1	0.1496	1	1	1	0.22899	1	0.25838	1
