		Clinical Features	Time to Death		AGE		PRIMARY.SITE.OF.DISEASE		NEOPLASM.DISEASESTAGE		PATHOLOGY.T.STAGE		PATHOLOGY.N.STAGE		PATHOLOGY.M.STAGE		GENDER		HISTOLOGICAL.TYPE		RADIATIONS.RADIATION.REGIMENINDICATION		COMPLETENESS.OF.RESECTION		NUMBER.OF.LYMPH.NODES	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q
AMP PEAK  1(1Q31.1) MUTATION ANALYSIS	136 (23%)	447	0.61474	1	0.31222	1	0.027402	1	0.42842	1	0.40477	1	0.086334	1	0.20304	1	0.20166	1	0.086289	1	0.035857	1	0.68	1	0.016893	1
AMP PEAK  2(2Q33.1) MUTATION ANALYSIS	125 (21%)	458	0.065613	1	0.35313	1	0.031806	1	0.018871	1	0.71771	1	0.0027692	1	0.34437	1	0.84013	1	0.0051012	1	0.10422	1	0.49505	1	0.031919	1
AMP PEAK  3(5P12) MUTATION ANALYSIS	108 (19%)	475	0.089526	1	0.35023	1	0.15116	1	0.27207	1	0.32282	1	0.079715	1	0.35167	1	0.74856	1	0.051305	1	0.37845	1	0.028922	1	0.081042	1
AMP PEAK  4(5Q22.3) MUTATION ANALYSIS	60 (10%)	523	0.35389	1	0.95658	1	0.44707	1	0.6202	1	0.91514	1	0.2717	1	0.041264	1	1	1	0.30018	1	1	1	0.069798	1	0.54626	1
AMP PEAK  5(6P21.1) MUTATION ANALYSIS	148 (25%)	435	0.95368	1	0.61743	1	0.031833	1	0.026924	1	0.21894	1	9.3025e-05	0.0813	0.14437	1	0.15381	1	0.0019462	1	0.001357	1	0.14362	1	0.0031131	1
AMP PEAK  6(7P21.3) MUTATION ANALYSIS	343 (59%)	240	0.76505	1	0.086731	1	0.037218	1	0.00035925	0.31	0.93659	1	8.7547e-06	0.0078	0.028353	1	0.80024	1	0.00074337	0.631	0.088895	1	0.26624	1	0.030677	1
AMP PEAK  7(8P11.23) MUTATION ANALYSIS	199 (34%)	384	0.27858	1	0.89012	1	0.62527	1	0.21019	1	0.40973	1	0.61603	1	0.35549	1	0.48437	1	0.20747	1	0.49908	1	0.15542	1	0.75783	1
AMP PEAK  8(8P11.21) MUTATION ANALYSIS	241 (41%)	342	0.74093	1	0.7431	1	0.63696	1	0.12596	1	0.50728	1	0.35933	1	0.31594	1	0.20681	1	0.10336	1	0.74244	1	0.044285	1	0.53484	1
AMP PEAK  9(8Q12.1) MUTATION ANALYSIS	312 (54%)	271	0.79077	1	0.2887	1	0.26265	1	0.11928	1	0.16597	1	0.16468	1	0.02988	1	0.61741	1	0.0072555	1	0.041775	1	0.10006	1	0.046537	1
AMP PEAK 10(8Q24.21) MUTATION ANALYSIS	349 (60%)	234	0.49385	1	0.3307	1	0.086836	1	0.18783	1	0.14697	1	0.23506	1	0.072587	1	0.3523	1	0.0081353	1	0.09258	1	0.2232	1	0.10191	1
AMP PEAK 11(10Q22.3) MUTATION ANALYSIS	36 (6%)	547	0.87108	1	0.38524	1	1	1	0.57401	1	0.27758	1	0.016226	1	0.90442	1	0.60799	1	0.92464	1	0.43884	1	0.92342	1	0.097127	1
AMP PEAK 12(11P15.5) MUTATION ANALYSIS	130 (22%)	453	0.71489	1	0.066819	1	0.14443	1	0.98043	1	0.27319	1	0.65636	1	0.33756	1	0.61824	1	0.0011824	0.994	0.11737	1	0.89127	1	0.4625	1
AMP PEAK 13(12P13.32) MUTATION ANALYSIS	144 (25%)	439	0.27397	1	0.04485	1	0.91388	1	0.16481	1	0.33114	1	0.10981	1	0.12402	1	0.63095	1	0.45686	1	0.6964	1	0.77831	1	0.44957	1
AMP PEAK 14(13Q12.13) MUTATION ANALYSIS	377 (65%)	206	0.2044	1	0.24617	1	0.0025401	1	0.00033414	0.289	0.77952	1	3.706e-05	0.0326	0.009228	1	0.54408	1	5.0305e-10	4.55e-07	1	1	0.049784	1	0.047431	1
AMP PEAK 15(13Q12.2) MUTATION ANALYSIS	372 (64%)	211	0.16602	1	0.18547	1	0.0019697	1	0.00087934	0.744	0.77772	1	7.7331e-05	0.0677	0.021367	1	0.38783	1	1.1587e-09	1.05e-06	1	1	0.090072	1	0.048913	1
AMP PEAK 16(13Q22.1) MUTATION ANALYSIS	377 (65%)	206	0.14311	1	0.35842	1	0.025506	1	0.0071407	1	0.89897	1	0.00011459	0.0999	0.02264	1	0.14056	1	1.4275e-08	1.29e-05	0.50356	1	0.27048	1	0.22816	1
AMP PEAK 17(15Q26.1) MUTATION ANALYSIS	43 (7%)	540	0.26533	1	0.56011	1	0.28678	1	0.15895	1	0.11809	1	0.0022138	1	0.61533	1	0.11422	1	0.39521	1	0.13747	1	0.57107	1	0.049379	1
AMP PEAK 18(16P11.2) MUTATION ANALYSIS	162 (28%)	421	0.90259	1	0.33948	1	0.91729	1	0.0019672	1	0.78774	1	6.8884e-05	0.0604	0.16083	1	0.64305	1	0.0022009	1	0.71373	1	0.2456	1	0.020415	1
AMP PEAK 19(17Q12) MUTATION ANALYSIS	145 (25%)	438	0.56511	1	0.35761	1	0.5196	1	0.20298	1	0.50255	1	0.19394	1	0.010643	1	0.084236	1	0.42888	1	0.46308	1	0.061548	1	0.39513	1
AMP PEAK 20(17Q24.1) MUTATION ANALYSIS	129 (22%)	454	0.080129	1	0.23663	1	0.9107	1	0.58559	1	0.79716	1	0.88864	1	0.047889	1	0.68942	1	0.083366	1	0.69151	1	0.18691	1	0.65127	1
AMP PEAK 21(19P13.2) MUTATION ANALYSIS	99 (17%)	484	0.34251	1	0.59587	1	0.26554	1	0.61383	1	0.50785	1	0.039075	1	0.19655	1	0.15046	1	0.047447	1	1	1	0.12105	1	0.93805	1
AMP PEAK 22(19Q12) MUTATION ANALYSIS	123 (21%)	460	0.56792	1	0.88917	1	0.25529	1	0.83487	1	0.67613	1	0.10117	1	0.12005	1	0.18564	1	0.025467	1	0.69247	1	0.46029	1	0.41473	1
AMP PEAK 23(20P11.23) MUTATION ANALYSIS	303 (52%)	280	0.96962	1	0.78775	1	0.015291	1	0.0035631	1	0.97576	1	0.096544	1	0.0010999	0.927	0.046046	1	0.00049262	0.423	0.17938	1	0.28815	1	0.47497	1
AMP PEAK 24(20Q11.21) MUTATION ANALYSIS	445 (76%)	138	0.44799	1	0.99442	1	9.6262e-06	0.00857	0.00076388	0.647	0.29044	1	0.0016989	1	0.0053824	1	0.2424	1	2.5744e-12	2.33e-09	0.69327	1	0.050817	1	0.44499	1
AMP PEAK 25(20Q12) MUTATION ANALYSIS	447 (77%)	136	0.41549	1	0.89685	1	5.0162e-06	0.00448	0.00020737	0.18	0.38298	1	0.0012643	1	0.0012867	1	0.24062	1	1.5724e-13	1.43e-10	0.69256	1	0.051653	1	0.49935	1
AMP PEAK 26(20Q13.32) MUTATION ANALYSIS	450 (77%)	133	0.52055	1	0.82849	1	2.2714e-05	0.0201	0.0007629	0.647	0.35877	1	0.0020264	1	0.0042246	1	0.42864	1	2.7123e-12	2.46e-09	0.69184	1	0.051551	1	0.3316	1
AMP PEAK 27(XQ28) MUTATION ANALYSIS	124 (21%)	459	0.3426	1	0.23299	1	0.42608	1	0.10076	1	0.46027	1	0.034502	1	0.26121	1	0.68495	1	0.019569	1	0.69219	1	0.28126	1	0.33287	1
DEL PEAK  1(1P36.11) MUTATION ANALYSIS	223 (38%)	360	0.060487	1	0.1674	1	0.10382	1	0.033609	1	0.2586	1	0.0019392	1	0.00070551	0.6	0.39321	1	0.005073	1	0.73765	1	0.10758	1	0.00065513	0.558
DEL PEAK  2(1P33) MUTATION ANALYSIS	156 (27%)	427	0.036366	1	0.9364	1	0.3434	1	0.030197	1	0.22951	1	0.010592	1	0.0098087	1	1	1	0.07251	1	0.70676	1	0.3106	1	0.01625	1
DEL PEAK  3(1P13.2) MUTATION ANALYSIS	158 (27%)	425	0.19265	1	0.67545	1	0.20857	1	0.0041783	1	0.13583	1	0.0020845	1	0.0014957	1	0.70925	1	0.11806	1	0.26242	1	0.27408	1	0.0030006	1
DEL PEAK  4(2P12) MUTATION ANALYSIS	20 (3%)	563	0.71243	1	0.16746	1	0.0033434	1	0.3606	1	1	1	0.37775	1	0.54155	1	0.82113	1	0.018135	1	0.27122	1	0.88434	1	0.31889	1
DEL PEAK  5(2Q22.1) MUTATION ANALYSIS	34 (6%)	549	0.89707	1	0.64379	1	0.84329	1	0.53848	1	0.62775	1	0.71461	1	0.63917	1	0.59741	1	0.98189	1	1	1	1	1	0.88026	1
DEL PEAK  6(2Q37.2) MUTATION ANALYSIS	30 (5%)	553	0.7424	1	0.12783	1	0.8337	1	0.18311	1	0.33712	1	0.17459	1	0.12503	1	0.45686	1	0.9364	1	1	1	0.35609	1	0.85663	1
DEL PEAK  7(3P26.3) MUTATION ANALYSIS	85 (15%)	498	0.011596	1	0.85878	1	0.69159	1	0.010452	1	0.031568	1	0.023446	1	0.0012124	1	0.63827	1	0.18154	1	0.13048	1	0.046602	1	0.032037	1
DEL PEAK  8(3P14.2) MUTATION ANALYSIS	106 (18%)	477	0.36656	1	0.53799	1	0.80843	1	0.14819	1	0.13033	1	0.1834	1	0.037235	1	0.52017	1	0.3753	1	0.67039	1	0.20541	1	0.027129	1
DEL PEAK  9(3Q26.31) MUTATION ANALYSIS	58 (10%)	525	0.60777	1	0.9708	1	0.87717	1	0.0035687	1	0.0098427	1	0.48008	1	0.47701	1	0.12667	1	0.035898	1	0.22277	1	0.25794	1	0.53417	1
DEL PEAK 10(4P16.1) MUTATION ANALYSIS	185 (32%)	398	0.11994	1	0.97138	1	0.057175	1	0.0030636	1	0.98978	1	0.00042433	0.365	0.0081235	1	0.090413	1	0.022959	1	2.8487e-05	0.0251	0.067872	1	0.0018961	1
DEL PEAK 11(4Q22.1) MUTATION ANALYSIS	202 (35%)	381	0.4897	1	0.39276	1	0.004505	1	0.031493	1	0.09588	1	0.0013846	1	0.34267	1	0.13903	1	0.0011775	0.991	0.0011936	1	0.79198	1	0.0035072	1
DEL PEAK 12(4Q35.1) MUTATION ANALYSIS	213 (37%)	370	0.54341	1	0.31669	1	0.042219	1	0.22068	1	0.50152	1	0.004059	1	0.35868	1	0.86312	1	0.02526	1	0.001793	1	0.72402	1	0.030188	1
DEL PEAK 13(5Q11.2) MUTATION ANALYSIS	141 (24%)	442	0.17653	1	0.13371	1	0.030001	1	0.021643	1	1	1	0.0073479	1	0.020897	1	1	1	0.010605	1	0.00098571	0.833	0.68999	1	0.027751	1
DEL PEAK 14(5Q22.2) MUTATION ANALYSIS	173 (30%)	410	0.14517	1	0.49165	1	0.12869	1	0.058467	1	0.76892	1	0.018038	1	0.028918	1	0.58647	1	0.052549	1	0.00035892	0.31	0.19675	1	0.16974	1
DEL PEAK 15(6P25.3) MUTATION ANALYSIS	78 (13%)	505	0.33155	1	0.058441	1	0.89053	1	0.61455	1	0.24871	1	0.45536	1	0.34857	1	0.088514	1	0.53434	1	0.34403	1	0.40817	1	0.75341	1
DEL PEAK 16(6Q26) MUTATION ANALYSIS	90 (15%)	493	0.063565	1	0.96162	1	0.36381	1	0.071332	1	0.053162	1	0.0089124	1	0.044689	1	0.30233	1	0.043806	1	0.63491	1	0.10995	1	0.0099293	1
DEL PEAK 17(7Q31.1) MUTATION ANALYSIS	15 (3%)	568	0.72613	1	0.34267	1	1	1	0.84054	1	0.52311	1	0.63347	1	0.32052	1	0.3057	1	0.52086	1	1	1	0.72836	1	0.61133	1
DEL PEAK 18(8P23.3) MUTATION ANALYSIS	276 (47%)	307	0.88209	1	0.24753	1	1.0865e-05	0.00966	0.0017034	1	0.084818	1	2.9823e-05	0.0263	0.017055	1	0.15749	1	1.9319e-05	0.0171	0.015542	1	0.021871	1	0.00054752	0.468
DEL PEAK 19(8P23.2) MUTATION ANALYSIS	276 (47%)	307	0.73183	1	0.20935	1	2.551e-05	0.0226	0.00051527	0.441	0.077292	1	1.6812e-05	0.0149	0.0080752	1	0.080734	1	2.1414e-05	0.019	0.015542	1	0.0086601	1	0.00054683	0.468
DEL PEAK 20(8P22) MUTATION ANALYSIS	289 (50%)	294	0.34656	1	0.32587	1	0.00039382	0.339	0.0001418	0.123	0.073359	1	7.2194e-07	0.000648	0.0030077	1	0.21292	1	0.00018236	0.158	0.019647	1	0.012347	1	0.0001454	0.126
DEL PEAK 21(8Q11.1) MUTATION ANALYSIS	45 (8%)	538	0.79987	1	0.42589	1	0.21748	1	0.033438	1	0.72129	1	0.024895	1	0.0021069	1	0.16133	1	0.43894	1	0.51721	1	0.34687	1	0.27323	1
DEL PEAK 22(9P24.2) MUTATION ANALYSIS	79 (14%)	504	0.019366	1	0.1142	1	0.49652	1	0.35893	1	0.53662	1	0.10311	1	0.012039	1	0.039565	1	0.42608	1	0.35012	1	0.10831	1	0.23161	1
DEL PEAK 23(10P15.3) MUTATION ANALYSIS	103 (18%)	480	0.40021	1	0.029741	1	0.22389	1	0.076617	1	0.7605	1	0.0087435	1	0.19389	1	1	1	0.34551	1	0.0014185	1	0.94362	1	0.049966	1
DEL PEAK 24(10Q21.1) MUTATION ANALYSIS	120 (21%)	463	0.82391	1	0.016704	1	0.48943	1	0.14031	1	0.70875	1	0.092715	1	0.54048	1	0.6813	1	0.10474	1	0.0033147	1	0.35803	1	0.15873	1
DEL PEAK 25(10Q23.31) MUTATION ANALYSIS	147 (25%)	436	0.47581	1	0.011455	1	0.041358	1	0.035862	1	0.24529	1	0.010786	1	0.036206	1	0.92384	1	0.018318	1	0.0012978	1	0.58902	1	0.20813	1
DEL PEAK 26(10Q25.2) MUTATION ANALYSIS	142 (24%)	441	0.97579	1	0.080214	1	0.12884	1	0.11941	1	0.17107	1	0.0073479	1	0.2926	1	1	1	0.028847	1	0.0010329	0.872	0.53496	1	0.15849	1
DEL PEAK 27(11Q22.3) MUTATION ANALYSIS	105 (18%)	478	0.28827	1	0.454	1	0.085743	1	0.77154	1	0.38773	1	0.07782	1	0.64122	1	0.51695	1	0.04983	1	0.060177	1	0.62389	1	0.05273	1
DEL PEAK 28(12P13.1) MUTATION ANALYSIS	79 (14%)	504	0.074023	1	0.41172	1	0.02793	1	0.57669	1	0.41802	1	0.017585	1	0.067195	1	0.46683	1	0.0005593	0.477	0.35012	1	0.75108	1	0.88017	1
DEL PEAK 29(12Q21.31) MUTATION ANALYSIS	78 (13%)	505	0.43921	1	0.53775	1	0.21665	1	0.15454	1	0.62289	1	0.056012	1	0.093424	1	1	1	0.017957	1	0.34403	1	0.73278	1	0.13413	1
DEL PEAK 30(14Q11.2) MUTATION ANALYSIS	193 (33%)	390	0.15015	1	0.51757	1	0.013111	1	0.76544	1	0.49403	1	0.021545	1	0.26169	1	1	1	6.8991e-06	0.00615	0.48761	1	0.91472	1	0.68069	1
DEL PEAK 31(14Q31.1) MUTATION ANALYSIS	198 (34%)	385	0.47966	1	0.2798	1	0.018342	1	0.30945	1	0.37388	1	0.022957	1	0.0253	1	0.25496	1	2.2743e-06	0.00204	0.72498	1	0.68574	1	0.3516	1
DEL PEAK 32(14Q31.1) MUTATION ANALYSIS	202 (35%)	381	0.27902	1	0.40164	1	0.01419	1	0.2841	1	0.28655	1	0.033179	1	0.042537	1	0.3386	1	3.9506e-06	0.00353	0.72574	1	0.70409	1	0.34065	1
DEL PEAK 33(15Q11.2) MUTATION ANALYSIS	235 (40%)	348	0.72237	1	0.74792	1	0.18366	1	0.092254	1	0.6956	1	0.0074077	1	0.207	1	0.4463	1	0.044218	1	0.034511	1	0.74914	1	0.056138	1
DEL PEAK 34(15Q21.1) MUTATION ANALYSIS	228 (39%)	355	0.49105	1	0.77975	1	0.027981	1	0.18002	1	0.79384	1	0.015858	1	0.18062	1	0.26975	1	0.010056	1	0.032124	1	0.45253	1	0.052889	1
DEL PEAK 35(15Q22.33) MUTATION ANALYSIS	218 (37%)	365	0.62068	1	0.45678	1	0.0091519	1	0.01158	1	0.065277	1	0.0029348	1	0.14854	1	0.66787	1	0.0041715	1	0.0021409	1	0.59768	1	0.02688	1
DEL PEAK 36(16P13.3) MUTATION ANALYSIS	59 (10%)	524	7.0379e-05	0.0617	0.21968	1	0.35952	1	0.048471	1	0.05517	1	0.18689	1	0.51316	1	1	1	0.41436	1	0.60884	1	0.76077	1	0.067532	1
DEL PEAK 37(16Q23.1) MUTATION ANALYSIS	73 (13%)	510	0.034359	1	0.23007	1	0.403	1	0.26113	1	0.18036	1	0.6469	1	0.9518	1	0.1328	1	0.74486	1	1	1	0.97096	1	0.27889	1
DEL PEAK 38(17P12) MUTATION ANALYSIS	345 (59%)	238	0.64094	1	0.15069	1	0.0012521	1	0.0018824	1	0.4781	1	0.00011156	0.0974	0.024197	1	0.44733	1	3.4401e-08	3.1e-05	0.32169	1	0.15772	1	0.0034651	1
DEL PEAK 39(17Q24.3) MUTATION ANALYSIS	85 (15%)	498	0.65234	1	0.35945	1	0.79271	1	0.11896	1	0.25283	1	0.0043039	1	0.38503	1	0.099211	1	0.99478	1	0.62599	1	0.37218	1	0.041658	1
DEL PEAK 40(18P11.31) MUTATION ANALYSIS	347 (60%)	236	0.99541	1	0.084354	1	2.9543e-06	0.00264	0.0016895	1	0.93888	1	0.014784	1	0.00048527	0.417	0.7999	1	5.2296e-17	4.76e-14	0.32394	1	0.019178	1	0.5726	1
DEL PEAK 41(18Q12.2) MUTATION ANALYSIS	392 (67%)	191	0.83642	1	0.12262	1	1.819e-09	1.64e-06	0.00059625	0.508	0.36532	1	0.0001315	0.114	0.0036931	1	0.33192	1	2.4816e-18	2.26e-15	0.034283	1	0.048764	1	0.016804	1
DEL PEAK 42(18Q21.2) MUTATION ANALYSIS	409 (70%)	174	0.73882	1	0.12739	1	1.2172e-09	1.1e-06	5.5218e-05	0.0485	0.32539	1	2.3191e-06	0.00208	0.0012901	1	0.10223	1	1.0505e-16	9.56e-14	0.063813	1	0.049494	1	0.0024676	1
DEL PEAK 43(18Q22.1) MUTATION ANALYSIS	404 (69%)	179	0.54484	1	0.30642	1	2.1445e-07	0.000193	0.00012282	0.107	0.48038	1	2.8374e-05	0.0251	0.0019112	1	0.15064	1	5.8023e-16	5.27e-13	0.063224	1	0.093271	1	0.0043059	1
DEL PEAK 44(19P13.3) MUTATION ANALYSIS	93 (16%)	490	0.76901	1	0.17907	1	0.030414	1	0.0014344	1	0.38589	1	5.8523e-05	0.0514	0.014309	1	0.65195	1	0.060823	1	0.64085	1	0.16321	1	0.0028298	1
DEL PEAK 45(19Q13.43) MUTATION ANALYSIS	68 (12%)	515	0.41422	1	0.86319	1	0.11042	1	0.0060574	1	0.43755	1	0.015033	1	0.06829	1	0.24768	1	0.36909	1	0.28304	1	0.83352	1	0.020135	1
DEL PEAK 46(20P12.1) MUTATION ANALYSIS	180 (31%)	403	0.050809	1	0.48057	1	0.035201	1	0.23801	1	0.46176	1	0.21905	1	0.75632	1	0.32372	1	0.11502	1	0.063203	1	0.32051	1	0.8266	1
DEL PEAK 47(20P12.1) MUTATION ANALYSIS	180 (31%)	403	0.050809	1	0.48057	1	0.035201	1	0.23801	1	0.46176	1	0.21905	1	0.75632	1	0.32372	1	0.11502	1	0.063203	1	0.32051	1	0.8266	1
DEL PEAK 48(21Q11.2) MUTATION ANALYSIS	198 (34%)	385	0.77129	1	0.73221	1	0.005711	1	0.30803	1	0.95604	1	0.051969	1	0.55719	1	0.53998	1	0.00049118	0.422	0.17605	1	0.79207	1	0.0054935	1
DEL PEAK 49(22Q13.32) MUTATION ANALYSIS	209 (36%)	374	0.079486	1	0.69702	1	0.24315	1	0.020946	1	0.40125	1	0.00051057	0.438	0.021986	1	0.66529	1	0.0068804	1	0.72828	1	0.53439	1	0.012856	1
