
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_cnvs_onlysig.4.4139/CNV2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_cnvs_onlysig.4.4139/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/479604/all_lesions.conf_99.cnv.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering_new/KIRP-TP/4467597/KIRP-TP.transferedmergedcluster.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=KIRP-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=KIRP-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=158, in cluster file=158, common to both=158
[1]  34 158
[1] "Amp Peak  1(2q32.2)"
[1] 3
      AMP PEAK  1(2Q32.2) CNV AMP PEAK  1(2Q32.2) WILD-TYPE 
                           34                           124 
      AMP PEAK  1(2Q32.2) CNV AMP PEAK  1(2Q32.2) WILD-TYPE 
                           34                           124 
[1] "Amp Peak  2(2q32.2)"
[1] 3
      AMP PEAK  2(2Q32.2) CNV AMP PEAK  2(2Q32.2) WILD-TYPE 
                           34                           124 
      AMP PEAK  2(2Q32.2) CNV AMP PEAK  2(2Q32.2) WILD-TYPE 
                           34                           124 
[1] "Amp Peak  3(3p14.1)"
[1] 3
      AMP PEAK  3(3P14.1) CNV AMP PEAK  3(3P14.1) WILD-TYPE 
                           43                           115 
      AMP PEAK  3(3P14.1) CNV AMP PEAK  3(3P14.1) WILD-TYPE 
                           43                           115 
[1] "Amp Peak  4(3q22.3)"
[1] 3
      AMP PEAK  4(3Q22.3) CNV AMP PEAK  4(3Q22.3) WILD-TYPE 
                           53                           105 
      AMP PEAK  4(3Q22.3) CNV AMP PEAK  4(3Q22.3) WILD-TYPE 
                           53                           105 
[1] "Amp Peak  5(5q35.2)"
[1] 3
      AMP PEAK  5(5Q35.2) CNV AMP PEAK  5(5Q35.2) WILD-TYPE 
                           24                           134 
      AMP PEAK  5(5Q35.2) CNV AMP PEAK  5(5Q35.2) WILD-TYPE 
                           24                           134 
[1] "Amp Peak  6(6p12.3)"
[1] 3
      AMP PEAK  6(6P12.3) CNV AMP PEAK  6(6P12.3) WILD-TYPE 
                            6                           152 
      AMP PEAK  6(6P12.3) CNV AMP PEAK  6(6P12.3) WILD-TYPE 
                            6                           152 
[1] "Amp Peak  7(7q22.1)"
[1] 3
      AMP PEAK  7(7Q22.1) CNV AMP PEAK  7(7Q22.1) WILD-TYPE 
                           89                            69 
      AMP PEAK  7(7Q22.1) CNV AMP PEAK  7(7Q22.1) WILD-TYPE 
                           89                            69 
[1] "Amp Peak  8(16p11.2)"
[1] 3
      AMP PEAK  8(16P11.2) CNV AMP PEAK  8(16P11.2) WILD-TYPE 
                            85                             73 
      AMP PEAK  8(16P11.2) CNV AMP PEAK  8(16P11.2) WILD-TYPE 
                            85                             73 
[1] "Amp Peak  9(17q25.2)"
[1] 3
      AMP PEAK  9(17Q25.2) CNV AMP PEAK  9(17Q25.2) WILD-TYPE 
                           112                             46 
      AMP PEAK  9(17Q25.2) CNV AMP PEAK  9(17Q25.2) WILD-TYPE 
                           112                             46 
[1] "Amp Peak 10(19p13.2)"
[1] 3
      AMP PEAK 10(19P13.2) CNV AMP PEAK 10(19P13.2) WILD-TYPE 
                            16                            142 
      AMP PEAK 10(19P13.2) CNV AMP PEAK 10(19P13.2) WILD-TYPE 
                            16                            142 
[1] "Del Peak  1(1p36.31)"
[1] 3
      DEL PEAK  1(1P36.31) CNV DEL PEAK  1(1P36.31) WILD-TYPE 
                            34                            124 
      DEL PEAK  1(1P36.31) CNV DEL PEAK  1(1P36.31) WILD-TYPE 
                            34                            124 
[1] "Del Peak  2(2q36.3)"
[1] 3
      DEL PEAK  2(2Q36.3) CNV DEL PEAK  2(2Q36.3) WILD-TYPE 
                            7                           151 
      DEL PEAK  2(2Q36.3) CNV DEL PEAK  2(2Q36.3) WILD-TYPE 
                            7                           151 
[1] "Del Peak  3(3p22.1)"
[1] 3
      DEL PEAK  3(3P22.1) CNV DEL PEAK  3(3P22.1) WILD-TYPE 
                           13                           145 
      DEL PEAK  3(3P22.1) CNV DEL PEAK  3(3P22.1) WILD-TYPE 
                           13                           145 
[1] "Del Peak  4(4q32.1)"
[1] 3
      DEL PEAK  4(4Q32.1) CNV DEL PEAK  4(4Q32.1) WILD-TYPE 
                           23                           135 
      DEL PEAK  4(4Q32.1) CNV DEL PEAK  4(4Q32.1) WILD-TYPE 
                           23                           135 
[1] "Del Peak  5(5p14.2)"
[1] 3
      DEL PEAK  5(5P14.2) CNV DEL PEAK  5(5P14.2) WILD-TYPE 
                           11                           147 
      DEL PEAK  5(5P14.2) CNV DEL PEAK  5(5P14.2) WILD-TYPE 
                           11                           147 
[1] "Del Peak  6(5q15)"
[1] 3
      DEL PEAK  6(5Q15) CNV DEL PEAK  6(5Q15) WILD-TYPE 
                         11                         147 
      DEL PEAK  6(5Q15) CNV DEL PEAK  6(5Q15) WILD-TYPE 
                         11                         147 
[1] "Del Peak  7(5q35.2)"
[1] 3
      DEL PEAK  7(5Q35.2) CNV DEL PEAK  7(5Q35.2) WILD-TYPE 
                           11                           147 
      DEL PEAK  7(5Q35.2) CNV DEL PEAK  7(5Q35.2) WILD-TYPE 
                           11                           147 
[1] "Del Peak  8(6p12.3)"
[1] 3
      DEL PEAK  8(6P12.3) CNV DEL PEAK  8(6P12.3) WILD-TYPE 
                           15                           143 
      DEL PEAK  8(6P12.3) CNV DEL PEAK  8(6P12.3) WILD-TYPE 
                           15                           143 
[1] "Del Peak  9(6q22.31)"
[1] 3
      DEL PEAK  9(6Q22.31) CNV DEL PEAK  9(6Q22.31) WILD-TYPE 
                            16                            142 
      DEL PEAK  9(6Q22.31) CNV DEL PEAK  9(6Q22.31) WILD-TYPE 
                            16                            142 
[1] "Del Peak 10(6q25.3)"
[1] 3
      DEL PEAK 10(6Q25.3) CNV DEL PEAK 10(6Q25.3) WILD-TYPE 
                           17                           141 
      DEL PEAK 10(6Q25.3) CNV DEL PEAK 10(6Q25.3) WILD-TYPE 
                           17                           141 
[1] "Del Peak 11(9p21.3)"
[1] 3
      DEL PEAK 11(9P21.3) CNV DEL PEAK 11(9P21.3) WILD-TYPE 
                           24                           134 
      DEL PEAK 11(9P21.3) CNV DEL PEAK 11(9P21.3) WILD-TYPE 
                           24                           134 
[1] "Del Peak 12(11q22.3)"
[1] 3
      DEL PEAK 12(11Q22.3) CNV DEL PEAK 12(11Q22.3) WILD-TYPE 
                            16                            142 
      DEL PEAK 12(11Q22.3) CNV DEL PEAK 12(11Q22.3) WILD-TYPE 
                            16                            142 
[1] "Del Peak 13(11q24.2)"
[1] 3
      DEL PEAK 13(11Q24.2) CNV DEL PEAK 13(11Q24.2) WILD-TYPE 
                            17                            141 
      DEL PEAK 13(11Q24.2) CNV DEL PEAK 13(11Q24.2) WILD-TYPE 
                            17                            141 
[1] "Del Peak 14(14q11.2)"
[1] 3
      DEL PEAK 14(14Q11.2) CNV DEL PEAK 14(14Q11.2) WILD-TYPE 
                            35                            123 
      DEL PEAK 14(14Q11.2) CNV DEL PEAK 14(14Q11.2) WILD-TYPE 
                            35                            123 
[1] "Del Peak 15(14q32.2)"
[1] 3
      DEL PEAK 15(14Q32.2) CNV DEL PEAK 15(14Q32.2) WILD-TYPE 
                            35                            123 
      DEL PEAK 15(14Q32.2) CNV DEL PEAK 15(14Q32.2) WILD-TYPE 
                            35                            123 
[1] "Del Peak 16(14q32.2)"
[1] 3
      DEL PEAK 16(14Q32.2) CNV DEL PEAK 16(14Q32.2) WILD-TYPE 
                            35                            123 
      DEL PEAK 16(14Q32.2) CNV DEL PEAK 16(14Q32.2) WILD-TYPE 
                            35                            123 
[1] "Del Peak 17(15q15.1)"
[1] 3
      DEL PEAK 17(15Q15.1) CNV DEL PEAK 17(15Q15.1) WILD-TYPE 
                            21                            137 
      DEL PEAK 17(15Q15.1) CNV DEL PEAK 17(15Q15.1) WILD-TYPE 
                            21                            137 
[1] "Del Peak 18(16q24.1)"
[1] 3
      DEL PEAK 18(16Q24.1) CNV DEL PEAK 18(16Q24.1) WILD-TYPE 
                             7                            151 
      DEL PEAK 18(16Q24.1) CNV DEL PEAK 18(16Q24.1) WILD-TYPE 
                             7                            151 
[1] "Del Peak 19(19p13.3)"
[1] 3
      DEL PEAK 19(19P13.3) CNV DEL PEAK 19(19P13.3) WILD-TYPE 
                            16                            142 
      DEL PEAK 19(19P13.3) CNV DEL PEAK 19(19P13.3) WILD-TYPE 
                            16                            142 
[1] "Del Peak 20(19q13.2)"
[1] 3
      DEL PEAK 20(19Q13.2) CNV DEL PEAK 20(19Q13.2) WILD-TYPE 
                            14                            144 
      DEL PEAK 20(19Q13.2) CNV DEL PEAK 20(19Q13.2) WILD-TYPE 
                            14                            144 
[1] "Del Peak 21(19q13.42)"
[1] 3
      DEL PEAK 21(19Q13.42) CNV DEL PEAK 21(19Q13.42) WILD-TYPE 
                             15                             143 
      DEL PEAK 21(19Q13.42) CNV DEL PEAK 21(19Q13.42) WILD-TYPE 
                             15                             143 
[1] "Del Peak 22(22q12.2)"
[1] 3
      DEL PEAK 22(22Q12.2) CNV DEL PEAK 22(22Q12.2) WILD-TYPE 
                            40                            118 
      DEL PEAK 22(22Q12.2) CNV DEL PEAK 22(22Q12.2) WILD-TYPE 
                            40                            118 
[1] "Del Peak 23(Xq21.31)"
[1] 3
      DEL PEAK 23(XQ21.31) CNV DEL PEAK 23(XQ21.31) WILD-TYPE 
                            22                            136 
      DEL PEAK 23(XQ21.31) CNV DEL PEAK 23(XQ21.31) WILD-TYPE 
                            22                            136 
[1] "Del Peak 24(Xq28)"
[1] 3
      DEL PEAK 24(XQ28) CNV DEL PEAK 24(XQ28) WILD-TYPE 
                         21                         137 
      DEL PEAK 24(XQ28) CNV DEL PEAK 24(XQ28) WILD-TYPE 
                         21                         137 
[1] "data2feature, selection=ALL"
[1] "CN_CNMF"                     "METHLYATION_CNMF"           
[3] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
[5] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[7] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 8 rows and 158 columns.

Variable 1:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'MRNASEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MIRSEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MIRSEQ_MATURE_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
[1] "CN_CNMF"                     "METHLYATION_CNMF"           
[3] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
[5] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[7] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 158 columns, 0 survival variables, and 8 non-survival variables.
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = Amp Peak  1(2q32.2)
D1V1, multiclass
        clus
vv       AMP PEAK  1(2Q32.2) CNV AMP PEAK  1(2Q32.2) WILD-TYPE
  CLUS_1                      12                            24
  CLUS_2                      20                            32
  CLUS_3                       2                            68
D1V2, multiclass
        clus
vv       AMP PEAK  1(2Q32.2) CNV AMP PEAK  1(2Q32.2) WILD-TYPE
  CLUS_1                       2                            35
  CLUS_2                      13                            30
  CLUS_3                      16                            46
D1V3, multiclass
        clus
vv       AMP PEAK  1(2Q32.2) CNV AMP PEAK  1(2Q32.2) WILD-TYPE
  CLUS_1                      10                            41
  CLUS_2                      12                            30
  CLUS_3                       8                            17
  CLUS_4                       1                            22
D1V4, multiclass
        clus
vv       AMP PEAK  1(2Q32.2) CNV AMP PEAK  1(2Q32.2) WILD-TYPE
  CLUS_1                       5                            18
  CLUS_2                      16                            58
  CLUS_3                      10                            34
D1V5, multiclass
        clus
vv       AMP PEAK  1(2Q32.2) CNV AMP PEAK  1(2Q32.2) WILD-TYPE
  CLUS_1                       6                            28
  CLUS_2                       6                            39
  CLUS_3                       9                            32
  CLUS_4                       6                            16
D1V6, multiclass
        clus
vv       AMP PEAK  1(2Q32.2) CNV AMP PEAK  1(2Q32.2) WILD-TYPE
  CLUS_1                      10                            35
  CLUS_2                       8                            35
  CLUS_3                       9                            45
D1V7, multiclass
        clus
vv       AMP PEAK  1(2Q32.2) CNV AMP PEAK  1(2Q32.2) WILD-TYPE
  CLUS_1                       8                            32
  CLUS_2                       6                            41
  CLUS_3                      10                            29
D1V8, multiclass
        clus
vv       AMP PEAK  1(2Q32.2) CNV AMP PEAK  1(2Q32.2) WILD-TYPE
  CLUS_1                       3                             7
  CLUS_2                       7                            45
  CLUS_3                      14                            50

Clustering(2) Variable = Amp Peak  2(2q32.2)
D2V1, multiclass
        clus
vv       AMP PEAK  2(2Q32.2) CNV AMP PEAK  2(2Q32.2) WILD-TYPE
  CLUS_1                      12                            24
  CLUS_2                      20                            32
  CLUS_3                       2                            68
D2V2, multiclass
        clus
vv       AMP PEAK  2(2Q32.2) CNV AMP PEAK  2(2Q32.2) WILD-TYPE
  CLUS_1                       2                            35
  CLUS_2                      13                            30
  CLUS_3                      16                            46
D2V3, multiclass
        clus
vv       AMP PEAK  2(2Q32.2) CNV AMP PEAK  2(2Q32.2) WILD-TYPE
  CLUS_1                      10                            41
  CLUS_2                      12                            30
  CLUS_3                       8                            17
  CLUS_4                       1                            22
D2V4, multiclass
        clus
vv       AMP PEAK  2(2Q32.2) CNV AMP PEAK  2(2Q32.2) WILD-TYPE
  CLUS_1                       5                            18
  CLUS_2                      16                            58
  CLUS_3                      10                            34
D2V5, multiclass
        clus
vv       AMP PEAK  2(2Q32.2) CNV AMP PEAK  2(2Q32.2) WILD-TYPE
  CLUS_1                       6                            28
  CLUS_2                       6                            39
  CLUS_3                       9                            32
  CLUS_4                       6                            16
D2V6, multiclass
        clus
vv       AMP PEAK  2(2Q32.2) CNV AMP PEAK  2(2Q32.2) WILD-TYPE
  CLUS_1                      10                            35
  CLUS_2                       8                            35
  CLUS_3                       9                            45
D2V7, multiclass
        clus
vv       AMP PEAK  2(2Q32.2) CNV AMP PEAK  2(2Q32.2) WILD-TYPE
  CLUS_1                       8                            32
  CLUS_2                       6                            41
  CLUS_3                      10                            29
D2V8, multiclass
        clus
vv       AMP PEAK  2(2Q32.2) CNV AMP PEAK  2(2Q32.2) WILD-TYPE
  CLUS_1                       3                             7
  CLUS_2                       7                            45
  CLUS_3                      14                            50

Clustering(3) Variable = Amp Peak  3(3p14.1)
D3V1, multiclass
        clus
vv       AMP PEAK  3(3P14.1) CNV AMP PEAK  3(3P14.1) WILD-TYPE
  CLUS_1                      31                             5
  CLUS_2                       8                            44
  CLUS_3                       4                            66
D3V2, multiclass
        clus
vv       AMP PEAK  3(3P14.1) CNV AMP PEAK  3(3P14.1) WILD-TYPE
  CLUS_1                      10                            27
  CLUS_2                       5                            38
  CLUS_3                      22                            40
D3V3, multiclass
        clus
vv       AMP PEAK  3(3P14.1) CNV AMP PEAK  3(3P14.1) WILD-TYPE
  CLUS_1                       3                            48
  CLUS_2                      18                            24
  CLUS_3                      11                            14
  CLUS_4                       7                            16
D3V4, multiclass
        clus
vv       AMP PEAK  3(3P14.1) CNV AMP PEAK  3(3P14.1) WILD-TYPE
  CLUS_1                       2                            21
  CLUS_2                      29                            45
  CLUS_3                       8                            36
D3V5, multiclass
        clus
vv       AMP PEAK  3(3P14.1) CNV AMP PEAK  3(3P14.1) WILD-TYPE
  CLUS_1                      12                            22
  CLUS_2                       7                            38
  CLUS_3                      16                            25
  CLUS_4                       1                            21
D3V6, multiclass
        clus
vv       AMP PEAK  3(3P14.1) CNV AMP PEAK  3(3P14.1) WILD-TYPE
  CLUS_1                      11                            34
  CLUS_2                      15                            28
  CLUS_3                      10                            44
D3V7, multiclass
        clus
vv       AMP PEAK  3(3P14.1) CNV AMP PEAK  3(3P14.1) WILD-TYPE
  CLUS_1                      12                            28
  CLUS_2                       8                            39
  CLUS_3                      10                            29
D3V8, multiclass
        clus
vv       AMP PEAK  3(3P14.1) CNV AMP PEAK  3(3P14.1) WILD-TYPE
  CLUS_1                       0                            10
  CLUS_2                       9                            43
  CLUS_3                      21                            43

Clustering(4) Variable = Amp Peak  4(3q22.3)
D4V1, multiclass
        clus
vv       AMP PEAK  4(3Q22.3) CNV AMP PEAK  4(3Q22.3) WILD-TYPE
  CLUS_1                      34                             2
  CLUS_2                      13                            39
  CLUS_3                       6                            64
D4V2, multiclass
        clus
vv       AMP PEAK  4(3Q22.3) CNV AMP PEAK  4(3Q22.3) WILD-TYPE
  CLUS_1                      11                            26
  CLUS_2                       9                            34
  CLUS_3                      27                            35
D4V3, multiclass
        clus
vv       AMP PEAK  4(3Q22.3) CNV AMP PEAK  4(3Q22.3) WILD-TYPE
  CLUS_1                       6                            45
  CLUS_2                      18                            24
  CLUS_3                      12                            13
  CLUS_4                      12                            11
D4V4, multiclass
        clus
vv       AMP PEAK  4(3Q22.3) CNV AMP PEAK  4(3Q22.3) WILD-TYPE
  CLUS_1                       5                            18
  CLUS_2                      32                            42
  CLUS_3                      11                            33
D4V5, multiclass
        clus
vv       AMP PEAK  4(3Q22.3) CNV AMP PEAK  4(3Q22.3) WILD-TYPE
  CLUS_1                      15                            19
  CLUS_2                      10                            35
  CLUS_3                      17                            24
  CLUS_4                       3                            19
D4V6, multiclass
        clus
vv       AMP PEAK  4(3Q22.3) CNV AMP PEAK  4(3Q22.3) WILD-TYPE
  CLUS_1                      15                            30
  CLUS_2                      17                            26
  CLUS_3                      13                            41
D4V7, multiclass
        clus
vv       AMP PEAK  4(3Q22.3) CNV AMP PEAK  4(3Q22.3) WILD-TYPE
  CLUS_1                      16                            24
  CLUS_2                      12                            35
  CLUS_3                      11                            28
D4V8, multiclass
        clus
vv       AMP PEAK  4(3Q22.3) CNV AMP PEAK  4(3Q22.3) WILD-TYPE
  CLUS_1                       1                             9
  CLUS_2                      12                            40
  CLUS_3                      26                            38

Clustering(5) Variable = Amp Peak  5(5q35.2)
D5V1, multiclass
        clus
vv       AMP PEAK  5(5Q35.2) CNV AMP PEAK  5(5Q35.2) WILD-TYPE
  CLUS_1                       1                            35
  CLUS_2                      18                            34
  CLUS_3                       5                            65
D5V2, multiclass
        clus
vv       AMP PEAK  5(5Q35.2) CNV AMP PEAK  5(5Q35.2) WILD-TYPE
  CLUS_1                       6                            31
  CLUS_2                      11                            32
  CLUS_3                       4                            58
D5V3, multiclass
        clus
vv       AMP PEAK  5(5Q35.2) CNV AMP PEAK  5(5Q35.2) WILD-TYPE
  CLUS_1                      11                            40
  CLUS_2                       3                            39
  CLUS_3                       7                            18
  CLUS_4                       2                            21
D5V4, multiclass
        clus
vv       AMP PEAK  5(5Q35.2) CNV AMP PEAK  5(5Q35.2) WILD-TYPE
  CLUS_1                       1                            22
  CLUS_2                       7                            67
  CLUS_3                      15                            29
D5V5, multiclass
        clus
vv       AMP PEAK  5(5Q35.2) CNV AMP PEAK  5(5Q35.2) WILD-TYPE
  CLUS_1                       9                            25
  CLUS_2                       5                            40
  CLUS_3                       2                            39
  CLUS_4                       5                            17
D5V6, multiclass
        clus
vv       AMP PEAK  5(5Q35.2) CNV AMP PEAK  5(5Q35.2) WILD-TYPE
  CLUS_1                      10                            35
  CLUS_2                       6                            37
  CLUS_3                       5                            49
D5V7, multiclass
        clus
vv       AMP PEAK  5(5Q35.2) CNV AMP PEAK  5(5Q35.2) WILD-TYPE
  CLUS_1                      10                            30
  CLUS_2                       4                            43
  CLUS_3                       4                            35
D5V8, multiclass
        clus
vv       AMP PEAK  5(5Q35.2) CNV AMP PEAK  5(5Q35.2) WILD-TYPE
  CLUS_1                       2                             8
  CLUS_2                       5                            47
  CLUS_3                      11                            53

Clustering(6) Variable = Amp Peak  6(6p12.3)
D6V1, multiclass
        clus
vv       AMP PEAK  6(6P12.3) CNV AMP PEAK  6(6P12.3) WILD-TYPE
  CLUS_1                       0                            36
  CLUS_2                       4                            48
  CLUS_3                       2                            68
D6V2, multiclass
        clus
vv       AMP PEAK  6(6P12.3) CNV AMP PEAK  6(6P12.3) WILD-TYPE
  CLUS_1                       0                            37
  CLUS_2                       5                            38
  CLUS_3                       1                            61
D6V3, multiclass
        clus
vv       AMP PEAK  6(6P12.3) CNV AMP PEAK  6(6P12.3) WILD-TYPE
  CLUS_1                       3                            48
  CLUS_2                       1                            41
  CLUS_3                       0                            25
  CLUS_4                       0                            23
D6V4, multiclass
        clus
vv       AMP PEAK  6(6P12.3) CNV AMP PEAK  6(6P12.3) WILD-TYPE
  CLUS_1                       2                            21
  CLUS_2                       1                            73
  CLUS_3                       1                            43
D6V5, multiclass
        clus
vv       AMP PEAK  6(6P12.3) CNV AMP PEAK  6(6P12.3) WILD-TYPE
  CLUS_1                       1                            33
  CLUS_2                       2                            43
  CLUS_3                       0                            41
  CLUS_4                       1                            21
D6V6, multiclass
        clus
vv       AMP PEAK  6(6P12.3) CNV AMP PEAK  6(6P12.3) WILD-TYPE
  CLUS_1                       1                            44
  CLUS_2                       0                            43
  CLUS_3                       3                            51
D6V7, multiclass
        clus
vv       AMP PEAK  6(6P12.3) CNV AMP PEAK  6(6P12.3) WILD-TYPE
  CLUS_1                       0                            40
  CLUS_2                       3                            44
  CLUS_3                       1                            38
D6V8, multiclass
        clus
vv       AMP PEAK  6(6P12.3) CNV AMP PEAK  6(6P12.3) WILD-TYPE
  CLUS_1                       0                            10
  CLUS_2                       3                            49
  CLUS_3                       1                            63

Clustering(7) Variable = Amp Peak  7(7q22.1)
D7V1, multiclass
        clus
vv       AMP PEAK  7(7Q22.1) CNV AMP PEAK  7(7Q22.1) WILD-TYPE
  CLUS_1                      34                             2
  CLUS_2                      16                            36
  CLUS_3                      39                            31
D7V2, multiclass
        clus
vv       AMP PEAK  7(7Q22.1) CNV AMP PEAK  7(7Q22.1) WILD-TYPE
  CLUS_1                      17                            20
  CLUS_2                      12                            31
  CLUS_3                      49                            13
D7V3, multiclass
        clus
vv       AMP PEAK  7(7Q22.1) CNV AMP PEAK  7(7Q22.1) WILD-TYPE
  CLUS_1                      14                            37
  CLUS_2                      38                             4
  CLUS_3                      11                            14
  CLUS_4                      19                             4
D7V4, multiclass
        clus
vv       AMP PEAK  7(7Q22.1) CNV AMP PEAK  7(7Q22.1) WILD-TYPE
  CLUS_1                       8                            15
  CLUS_2                      60                            14
  CLUS_3                      14                            30
D7V5, multiclass
        clus
vv       AMP PEAK  7(7Q22.1) CNV AMP PEAK  7(7Q22.1) WILD-TYPE
  CLUS_1                      19                            15
  CLUS_2                      25                            20
  CLUS_3                      32                             9
  CLUS_4                       7                            15
D7V6, multiclass
        clus
vv       AMP PEAK  7(7Q22.1) CNV AMP PEAK  7(7Q22.1) WILD-TYPE
  CLUS_1                      22                            23
  CLUS_2                      31                            12
  CLUS_3                      30                            24
D7V7, multiclass
        clus
vv       AMP PEAK  7(7Q22.1) CNV AMP PEAK  7(7Q22.1) WILD-TYPE
  CLUS_1                      20                            20
  CLUS_2                      25                            22
  CLUS_3                      27                            12
D7V8, multiclass
        clus
vv       AMP PEAK  7(7Q22.1) CNV AMP PEAK  7(7Q22.1) WILD-TYPE
  CLUS_1                       3                             7
  CLUS_2                      27                            25
  CLUS_3                      42                            22

Clustering(8) Variable = Amp Peak  8(16p11.2)
D8V1, multiclass
        clus
vv       AMP PEAK  8(16P11.2) CNV AMP PEAK  8(16P11.2) WILD-TYPE
  CLUS_1                       36                              0
  CLUS_2                       26                             26
  CLUS_3                       23                             47
D8V2, multiclass
        clus
vv       AMP PEAK  8(16P11.2) CNV AMP PEAK  8(16P11.2) WILD-TYPE
  CLUS_1                       17                             20
  CLUS_2                       24                             19
  CLUS_3                       37                             25
D8V3, multiclass
        clus
vv       AMP PEAK  8(16P11.2) CNV AMP PEAK  8(16P11.2) WILD-TYPE
  CLUS_1                       20                             31
  CLUS_2                       26                             16
  CLUS_3                       19                              6
  CLUS_4                       12                             11
D8V4, multiclass
        clus
vv       AMP PEAK  8(16P11.2) CNV AMP PEAK  8(16P11.2) WILD-TYPE
  CLUS_1                        6                             17
  CLUS_2                       45                             29
  CLUS_3                       26                             18
D8V5, multiclass
        clus
vv       AMP PEAK  8(16P11.2) CNV AMP PEAK  8(16P11.2) WILD-TYPE
  CLUS_1                       20                             14
  CLUS_2                       19                             26
  CLUS_3                       26                             15
  CLUS_4                        8                             14
D8V6, multiclass
        clus
vv       AMP PEAK  8(16P11.2) CNV AMP PEAK  8(16P11.2) WILD-TYPE
  CLUS_1                       23                             22
  CLUS_2                       28                             15
  CLUS_3                       22                             32
D8V7, multiclass
        clus
vv       AMP PEAK  8(16P11.2) CNV AMP PEAK  8(16P11.2) WILD-TYPE
  CLUS_1                       27                             13
  CLUS_2                       18                             29
  CLUS_3                       21                             18
D8V8, multiclass
        clus
vv       AMP PEAK  8(16P11.2) CNV AMP PEAK  8(16P11.2) WILD-TYPE
  CLUS_1                        5                              5
  CLUS_2                       21                             31
  CLUS_3                       40                             24

Clustering(9) Variable = Amp Peak  9(17q25.2)
D9V1, multiclass
        clus
vv       AMP PEAK  9(17Q25.2) CNV AMP PEAK  9(17Q25.2) WILD-TYPE
  CLUS_1                       35                              1
  CLUS_2                       29                             23
  CLUS_3                       48                             22
D9V2, multiclass
        clus
vv       AMP PEAK  9(17Q25.2) CNV AMP PEAK  9(17Q25.2) WILD-TYPE
  CLUS_1                       21                             16
  CLUS_2                       29                             14
  CLUS_3                       50                             12
D9V3, multiclass
        clus
vv       AMP PEAK  9(17Q25.2) CNV AMP PEAK  9(17Q25.2) WILD-TYPE
  CLUS_1                       27                             24
  CLUS_2                       38                              4
  CLUS_3                       19                              6
  CLUS_4                       17                              6
D9V4, multiclass
        clus
vv       AMP PEAK  9(17Q25.2) CNV AMP PEAK  9(17Q25.2) WILD-TYPE
  CLUS_1                       11                             12
  CLUS_2                       61                             13
  CLUS_3                       29                             15
D9V5, multiclass
        clus
vv       AMP PEAK  9(17Q25.2) CNV AMP PEAK  9(17Q25.2) WILD-TYPE
  CLUS_1                       24                             10
  CLUS_2                       31                             14
  CLUS_3                       32                              9
  CLUS_4                       14                              8
D9V6, multiclass
        clus
vv       AMP PEAK  9(17Q25.2) CNV AMP PEAK  9(17Q25.2) WILD-TYPE
  CLUS_1                       31                             14
  CLUS_2                       32                             11
  CLUS_3                       38                             16
D9V7, multiclass
        clus
vv       AMP PEAK  9(17Q25.2) CNV AMP PEAK  9(17Q25.2) WILD-TYPE
  CLUS_1                       28                             12
  CLUS_2                       31                             16
  CLUS_3                       30                              9
D9V8, multiclass
        clus
vv       AMP PEAK  9(17Q25.2) CNV AMP PEAK  9(17Q25.2) WILD-TYPE
  CLUS_1                        6                              4
  CLUS_2                       36                             16
  CLUS_3                       47                             17

Clustering(10) Variable = Amp Peak 10(19p13.2)
D10V1, multiclass
        clus
vv       AMP PEAK 10(19P13.2) CNV AMP PEAK 10(19P13.2) WILD-TYPE
  CLUS_1                        3                             33
  CLUS_2                        4                             48
  CLUS_3                        9                             61
D10V2, multiclass
        clus
vv       AMP PEAK 10(19P13.2) CNV AMP PEAK 10(19P13.2) WILD-TYPE
  CLUS_1                        0                             37
  CLUS_2                        3                             40
  CLUS_3                        9                             53
D10V3, multiclass
        clus
vv       AMP PEAK 10(19P13.2) CNV AMP PEAK 10(19P13.2) WILD-TYPE
  CLUS_1                        3                             48
  CLUS_2                        9                             33
  CLUS_3                        1                             24
  CLUS_4                        1                             22
D10V4, multiclass
        clus
vv       AMP PEAK 10(19P13.2) CNV AMP PEAK 10(19P13.2) WILD-TYPE
  CLUS_1                        2                             21
  CLUS_2                       10                             64
  CLUS_3                        2                             42
D10V5, multiclass
        clus
vv       AMP PEAK 10(19P13.2) CNV AMP PEAK 10(19P13.2) WILD-TYPE
  CLUS_1                        3                             31
  CLUS_2                        5                             40
  CLUS_3                        5                             36
  CLUS_4                        2                             20
D10V6, multiclass
        clus
vv       AMP PEAK 10(19P13.2) CNV AMP PEAK 10(19P13.2) WILD-TYPE
  CLUS_1                        4                             41
  CLUS_2                        5                             38
  CLUS_3                        6                             48
D10V7, multiclass
        clus
vv       AMP PEAK 10(19P13.2) CNV AMP PEAK 10(19P13.2) WILD-TYPE
  CLUS_1                        3                             37
  CLUS_2                        4                             43
  CLUS_3                        4                             35
D10V8, multiclass
        clus
vv       AMP PEAK 10(19P13.2) CNV AMP PEAK 10(19P13.2) WILD-TYPE
  CLUS_1                        2                              8
  CLUS_2                        4                             48
  CLUS_3                        5                             59

Clustering(11) Variable = Del Peak  1(1p36.31)
D11V1, multiclass
        clus
vv       DEL PEAK  1(1P36.31) CNV DEL PEAK  1(1P36.31) WILD-TYPE
  CLUS_1                        1                             35
  CLUS_2                       28                             24
  CLUS_3                        5                             65
D11V2, multiclass
        clus
vv       DEL PEAK  1(1P36.31) CNV DEL PEAK  1(1P36.31) WILD-TYPE
  CLUS_1                        6                             31
  CLUS_2                       18                             25
  CLUS_3                        7                             55
D11V3, multiclass
        clus
vv       DEL PEAK  1(1P36.31) CNV DEL PEAK  1(1P36.31) WILD-TYPE
  CLUS_1                       22                             29
  CLUS_2                        4                             38
  CLUS_3                        2                             23
  CLUS_4                        0                             23
D11V4, multiclass
        clus
vv       DEL PEAK  1(1P36.31) CNV DEL PEAK  1(1P36.31) WILD-TYPE
  CLUS_1                        7                             16
  CLUS_2                        8                             66
  CLUS_3                       13                             31
D11V5, multiclass
        clus
vv       DEL PEAK  1(1P36.31) CNV DEL PEAK  1(1P36.31) WILD-TYPE
  CLUS_1                        5                             29
  CLUS_2                        7                             38
  CLUS_3                        9                             32
  CLUS_4                        8                             14
D11V6, multiclass
        clus
vv       DEL PEAK  1(1P36.31) CNV DEL PEAK  1(1P36.31) WILD-TYPE
  CLUS_1                       12                             33
  CLUS_2                        8                             35
  CLUS_3                        9                             45
D11V7, multiclass
        clus
vv       DEL PEAK  1(1P36.31) CNV DEL PEAK  1(1P36.31) WILD-TYPE
  CLUS_1                       10                             30
  CLUS_2                        8                             39
  CLUS_3                        8                             31
D11V8, multiclass
        clus
vv       DEL PEAK  1(1P36.31) CNV DEL PEAK  1(1P36.31) WILD-TYPE
  CLUS_1                        3                              7
  CLUS_2                       10                             42
  CLUS_3                       13                             51

Clustering(12) Variable = Del Peak  2(2q36.3)
D12V1, multiclass
        clus
vv       DEL PEAK  2(2Q36.3) CNV DEL PEAK  2(2Q36.3) WILD-TYPE
  CLUS_1                       0                            36
  CLUS_2                       6                            46
  CLUS_3                       1                            69
D12V2, multiclass
        clus
vv       DEL PEAK  2(2Q36.3) CNV DEL PEAK  2(2Q36.3) WILD-TYPE
  CLUS_1                       0                            37
  CLUS_2                       5                            38
  CLUS_3                       0                            62
D12V3, multiclass
        clus
vv       DEL PEAK  2(2Q36.3) CNV DEL PEAK  2(2Q36.3) WILD-TYPE
  CLUS_1                       4                            47
  CLUS_2                       1                            41
  CLUS_3                       1                            24
  CLUS_4                       0                            23
D12V4, multiclass
        clus
vv       DEL PEAK  2(2Q36.3) CNV DEL PEAK  2(2Q36.3) WILD-TYPE
  CLUS_1                       2                            21
  CLUS_2                       1                            73
  CLUS_3                       3                            41
D12V5, multiclass
        clus
vv       DEL PEAK  2(2Q36.3) CNV DEL PEAK  2(2Q36.3) WILD-TYPE
  CLUS_1                       2                            32
  CLUS_2                       1                            44
  CLUS_3                       1                            40
  CLUS_4                       2                            20
D12V6, multiclass
        clus
vv       DEL PEAK  2(2Q36.3) CNV DEL PEAK  2(2Q36.3) WILD-TYPE
  CLUS_1                       2                            43
  CLUS_2                       2                            41
  CLUS_3                       2                            52
D12V7, multiclass
        clus
vv       DEL PEAK  2(2Q36.3) CNV DEL PEAK  2(2Q36.3) WILD-TYPE
  CLUS_1                       2                            38
  CLUS_2                       0                            47
  CLUS_3                       2                            37
D12V8, multiclass
        clus
vv       DEL PEAK  2(2Q36.3) CNV DEL PEAK  2(2Q36.3) WILD-TYPE
  CLUS_1                       1                             9
  CLUS_2                       1                            51
  CLUS_3                       2                            62

Clustering(13) Variable = Del Peak  3(3p22.1)
D13V1, multiclass
        clus
vv       DEL PEAK  3(3P22.1) CNV DEL PEAK  3(3P22.1) WILD-TYPE
  CLUS_1                       0                            36
  CLUS_2                      12                            40
  CLUS_3                       1                            69
D13V2, multiclass
        clus
vv       DEL PEAK  3(3P22.1) CNV DEL PEAK  3(3P22.1) WILD-TYPE
  CLUS_1                       0                            37
  CLUS_2                      12                            31
  CLUS_3                       0                            62
D13V3, multiclass
        clus
vv       DEL PEAK  3(3P22.1) CNV DEL PEAK  3(3P22.1) WILD-TYPE
  CLUS_1                      10                            41
  CLUS_2                       0                            42
  CLUS_3                       2                            23
  CLUS_4                       0                            23
D13V4, multiclass
        clus
vv       DEL PEAK  3(3P22.1) CNV DEL PEAK  3(3P22.1) WILD-TYPE
  CLUS_1                       2                            21
  CLUS_2                       0                            74
  CLUS_3                      10                            34
D13V5, multiclass
        clus
vv       DEL PEAK  3(3P22.1) CNV DEL PEAK  3(3P22.1) WILD-TYPE
  CLUS_1                       2                            32
  CLUS_2                       2                            43
  CLUS_3                       1                            40
  CLUS_4                       6                            16
D13V6, multiclass
        clus
vv       DEL PEAK  3(3P22.1) CNV DEL PEAK  3(3P22.1) WILD-TYPE
  CLUS_1                       7                            38
  CLUS_2                       1                            42
  CLUS_3                       3                            51
D13V7, multiclass
        clus
vv       DEL PEAK  3(3P22.1) CNV DEL PEAK  3(3P22.1) WILD-TYPE
  CLUS_1                       6                            34
  CLUS_2                       3                            44
  CLUS_3                       1                            38
D13V8, multiclass
        clus
vv       DEL PEAK  3(3P22.1) CNV DEL PEAK  3(3P22.1) WILD-TYPE
  CLUS_1                       4                             6
  CLUS_2                       5                            47
  CLUS_3                       1                            63

Clustering(14) Variable = Del Peak  4(4q32.1)
D14V1, multiclass
        clus
vv       DEL PEAK  4(4Q32.1) CNV DEL PEAK  4(4Q32.1) WILD-TYPE
  CLUS_1                       0                            36
  CLUS_2                      20                            32
  CLUS_3                       3                            67
D14V2, multiclass
        clus
vv       DEL PEAK  4(4Q32.1) CNV DEL PEAK  4(4Q32.1) WILD-TYPE
  CLUS_1                       1                            36
  CLUS_2                      17                            26
  CLUS_3                       1                            61
D14V3, multiclass
        clus
vv       DEL PEAK  4(4Q32.1) CNV DEL PEAK  4(4Q32.1) WILD-TYPE
  CLUS_1                      18                            33
  CLUS_2                       1                            41
  CLUS_3                       0                            25
  CLUS_4                       0                            23
D14V4, multiclass
        clus
vv       DEL PEAK  4(4Q32.1) CNV DEL PEAK  4(4Q32.1) WILD-TYPE
  CLUS_1                       6                            17
  CLUS_2                       3                            71
  CLUS_3                      10                            34
D14V5, multiclass
        clus
vv       DEL PEAK  4(4Q32.1) CNV DEL PEAK  4(4Q32.1) WILD-TYPE
  CLUS_1                       2                            32
  CLUS_2                       8                            37
  CLUS_3                       4                            37
  CLUS_4                       6                            16
D14V6, multiclass
        clus
vv       DEL PEAK  4(4Q32.1) CNV DEL PEAK  4(4Q32.1) WILD-TYPE
  CLUS_1                       8                            37
  CLUS_2                       4                            39
  CLUS_3                       8                            46
D14V7, multiclass
        clus
vv       DEL PEAK  4(4Q32.1) CNV DEL PEAK  4(4Q32.1) WILD-TYPE
  CLUS_1                       6                            34
  CLUS_2                       6                            41
  CLUS_3                       4                            35
D14V8, multiclass
        clus
vv       DEL PEAK  4(4Q32.1) CNV DEL PEAK  4(4Q32.1) WILD-TYPE
  CLUS_1                       3                             7
  CLUS_2                       8                            44
  CLUS_3                       5                            59

Clustering(15) Variable = Del Peak  5(5p14.2)
D15V1, multiclass
        clus
vv       DEL PEAK  5(5P14.2) CNV DEL PEAK  5(5P14.2) WILD-TYPE
  CLUS_1                       3                            33
  CLUS_2                       7                            45
  CLUS_3                       1                            69
D15V2, multiclass
        clus
vv       DEL PEAK  5(5P14.2) CNV DEL PEAK  5(5P14.2) WILD-TYPE
  CLUS_1                       1                            36
  CLUS_2                       8                            35
  CLUS_3                       2                            60
D15V3, multiclass
        clus
vv       DEL PEAK  5(5P14.2) CNV DEL PEAK  5(5P14.2) WILD-TYPE
  CLUS_1                       6                            45
  CLUS_2                       1                            41
  CLUS_3                       0                            25
  CLUS_4                       1                            22
D15V4, multiclass
        clus
vv       DEL PEAK  5(5P14.2) CNV DEL PEAK  5(5P14.2) WILD-TYPE
  CLUS_1                       5                            18
  CLUS_2                       2                            72
  CLUS_3                       1                            43
D15V5, multiclass
        clus
vv       DEL PEAK  5(5P14.2) CNV DEL PEAK  5(5P14.2) WILD-TYPE
  CLUS_1                       3                            31
  CLUS_2                       5                            40
  CLUS_3                       1                            40
  CLUS_4                       0                            22
D15V6, multiclass
        clus
vv       DEL PEAK  5(5P14.2) CNV DEL PEAK  5(5P14.2) WILD-TYPE
  CLUS_1                       3                            42
  CLUS_2                       1                            42
  CLUS_3                       5                            49
D15V7, multiclass
        clus
vv       DEL PEAK  5(5P14.2) CNV DEL PEAK  5(5P14.2) WILD-TYPE
  CLUS_1                       2                            38
  CLUS_2                       5                            42
  CLUS_3                       2                            37
D15V8, multiclass
        clus
vv       DEL PEAK  5(5P14.2) CNV DEL PEAK  5(5P14.2) WILD-TYPE
  CLUS_1                       0                            10
  CLUS_2                       5                            47
  CLUS_3                       4                            60

Clustering(16) Variable = Del Peak  6(5q15)
D16V1, multiclass
        clus
vv       DEL PEAK  6(5Q15) CNV DEL PEAK  6(5Q15) WILD-TYPE
  CLUS_1                     2                          34
  CLUS_2                     7                          45
  CLUS_3                     2                          68
D16V2, multiclass
        clus
vv       DEL PEAK  6(5Q15) CNV DEL PEAK  6(5Q15) WILD-TYPE
  CLUS_1                     1                          36
  CLUS_2                     8                          35
  CLUS_3                     2                          60
D16V3, multiclass
        clus
vv       DEL PEAK  6(5Q15) CNV DEL PEAK  6(5Q15) WILD-TYPE
  CLUS_1                     7                          44
  CLUS_2                     0                          42
  CLUS_3                     0                          25
  CLUS_4                     1                          22
D16V4, multiclass
        clus
vv       DEL PEAK  6(5Q15) CNV DEL PEAK  6(5Q15) WILD-TYPE
  CLUS_1                     6                          17
  CLUS_2                     1                          73
  CLUS_3                     1                          43
D16V5, multiclass
        clus
vv       DEL PEAK  6(5Q15) CNV DEL PEAK  6(5Q15) WILD-TYPE
  CLUS_1                     2                          32
  CLUS_2                     5                          40
  CLUS_3                     2                          39
  CLUS_4                     1                          21
D16V6, multiclass
        clus
vv       DEL PEAK  6(5Q15) CNV DEL PEAK  6(5Q15) WILD-TYPE
  CLUS_1                     3                          42
  CLUS_2                     0                          43
  CLUS_3                     7                          47
D16V7, multiclass
        clus
vv       DEL PEAK  6(5Q15) CNV DEL PEAK  6(5Q15) WILD-TYPE
  CLUS_1                     3                          37
  CLUS_2                     5                          42
  CLUS_3                     2                          37
D16V8, multiclass
        clus
vv       DEL PEAK  6(5Q15) CNV DEL PEAK  6(5Q15) WILD-TYPE
  CLUS_1                     0                          10
  CLUS_2                     8                          44
  CLUS_3                     2                          62

Clustering(17) Variable = Del Peak  7(5q35.2)
D17V1, multiclass
        clus
vv       DEL PEAK  7(5Q35.2) CNV DEL PEAK  7(5Q35.2) WILD-TYPE
  CLUS_1                       1                            35
  CLUS_2                       8                            44
  CLUS_3                       2                            68
D17V2, multiclass
        clus
vv       DEL PEAK  7(5Q35.2) CNV DEL PEAK  7(5Q35.2) WILD-TYPE
  CLUS_1                       1                            36
  CLUS_2                       9                            34
  CLUS_3                       0                            62
D17V3, multiclass
        clus
vv       DEL PEAK  7(5Q35.2) CNV DEL PEAK  7(5Q35.2) WILD-TYPE
  CLUS_1                       9                            42
  CLUS_2                       0                            42
  CLUS_3                       0                            25
  CLUS_4                       0                            23
D17V4, multiclass
        clus
vv       DEL PEAK  7(5Q35.2) CNV DEL PEAK  7(5Q35.2) WILD-TYPE
  CLUS_1                       7                            16
  CLUS_2                       0                            74
  CLUS_3                       2                            42
D17V5, multiclass
        clus
vv       DEL PEAK  7(5Q35.2) CNV DEL PEAK  7(5Q35.2) WILD-TYPE
  CLUS_1                       1                            33
  CLUS_2                       6                            39
  CLUS_3                       1                            40
  CLUS_4                       2                            20
D17V6, multiclass
        clus
vv       DEL PEAK  7(5Q35.2) CNV DEL PEAK  7(5Q35.2) WILD-TYPE
  CLUS_1                       3                            42
  CLUS_2                       0                            43
  CLUS_3                       7                            47
D17V7, multiclass
        clus
vv       DEL PEAK  7(5Q35.2) CNV DEL PEAK  7(5Q35.2) WILD-TYPE
  CLUS_1                       2                            38
  CLUS_2                       5                            42
  CLUS_3                       2                            37
D17V8, multiclass
        clus
vv       DEL PEAK  7(5Q35.2) CNV DEL PEAK  7(5Q35.2) WILD-TYPE
  CLUS_1                       0                            10
  CLUS_2                       7                            45
  CLUS_3                       2                            62

Clustering(18) Variable = Del Peak  8(6p12.3)
D18V1, multiclass
        clus
vv       DEL PEAK  8(6P12.3) CNV DEL PEAK  8(6P12.3) WILD-TYPE
  CLUS_1                       1                            35
  CLUS_2                      11                            41
  CLUS_3                       3                            67
D18V2, multiclass
        clus
vv       DEL PEAK  8(6P12.3) CNV DEL PEAK  8(6P12.3) WILD-TYPE
  CLUS_1                       1                            36
  CLUS_2                      10                            33
  CLUS_3                       3                            59
D18V3, multiclass
        clus
vv       DEL PEAK  8(6P12.3) CNV DEL PEAK  8(6P12.3) WILD-TYPE
  CLUS_1                       8                            43
  CLUS_2                       3                            39
  CLUS_3                       2                            23
  CLUS_4                       0                            23
D18V4, multiclass
        clus
vv       DEL PEAK  8(6P12.3) CNV DEL PEAK  8(6P12.3) WILD-TYPE
  CLUS_1                       2                            21
  CLUS_2                       5                            69
  CLUS_3                       6                            38
D18V5, multiclass
        clus
vv       DEL PEAK  8(6P12.3) CNV DEL PEAK  8(6P12.3) WILD-TYPE
  CLUS_1                       2                            32
  CLUS_2                       4                            41
  CLUS_3                       4                            37
  CLUS_4                       3                            19
D18V6, multiclass
        clus
vv       DEL PEAK  8(6P12.3) CNV DEL PEAK  8(6P12.3) WILD-TYPE
  CLUS_1                       5                            40
  CLUS_2                       3                            40
  CLUS_3                       5                            49
D18V7, multiclass
        clus
vv       DEL PEAK  8(6P12.3) CNV DEL PEAK  8(6P12.3) WILD-TYPE
  CLUS_1                       4                            36
  CLUS_2                       4                            43
  CLUS_3                       4                            35
D18V8, multiclass
        clus
vv       DEL PEAK  8(6P12.3) CNV DEL PEAK  8(6P12.3) WILD-TYPE
  CLUS_1                       2                             8
  CLUS_2                       5                            47
  CLUS_3                       5                            59

Clustering(19) Variable = Del Peak  9(6q22.31)
D19V1, multiclass
        clus
vv       DEL PEAK  9(6Q22.31) CNV DEL PEAK  9(6Q22.31) WILD-TYPE
  CLUS_1                        1                             35
  CLUS_2                       11                             41
  CLUS_3                        4                             66
D19V2, multiclass
        clus
vv       DEL PEAK  9(6Q22.31) CNV DEL PEAK  9(6Q22.31) WILD-TYPE
  CLUS_1                        3                             34
  CLUS_2                       10                             33
  CLUS_3                        2                             60
D19V3, multiclass
        clus
vv       DEL PEAK  9(6Q22.31) CNV DEL PEAK  9(6Q22.31) WILD-TYPE
  CLUS_1                       11                             40
  CLUS_2                        2                             40
  CLUS_3                        1                             24
  CLUS_4                        0                             23
D19V4, multiclass
        clus
vv       DEL PEAK  9(6Q22.31) CNV DEL PEAK  9(6Q22.31) WILD-TYPE
  CLUS_1                        5                             18
  CLUS_2                        4                             70
  CLUS_3                        5                             39
D19V5, multiclass
        clus
vv       DEL PEAK  9(6Q22.31) CNV DEL PEAK  9(6Q22.31) WILD-TYPE
  CLUS_1                        1                             33
  CLUS_2                        6                             39
  CLUS_3                        4                             37
  CLUS_4                        3                             19
D19V6, multiclass
        clus
vv       DEL PEAK  9(6Q22.31) CNV DEL PEAK  9(6Q22.31) WILD-TYPE
  CLUS_1                        4                             41
  CLUS_2                        2                             41
  CLUS_3                        8                             46
D19V7, multiclass
        clus
vv       DEL PEAK  9(6Q22.31) CNV DEL PEAK  9(6Q22.31) WILD-TYPE
  CLUS_1                        4                             36
  CLUS_2                        7                             40
  CLUS_3                        2                             37
D19V8, multiclass
        clus
vv       DEL PEAK  9(6Q22.31) CNV DEL PEAK  9(6Q22.31) WILD-TYPE
  CLUS_1                        2                              8
  CLUS_2                        8                             44
  CLUS_3                        3                             61

Clustering(20) Variable = Del Peak 10(6q25.3)
D20V1, multiclass
        clus
vv       DEL PEAK 10(6Q25.3) CNV DEL PEAK 10(6Q25.3) WILD-TYPE
  CLUS_1                       1                            35
  CLUS_2                      13                            39
  CLUS_3                       3                            67
D20V2, multiclass
        clus
vv       DEL PEAK 10(6Q25.3) CNV DEL PEAK 10(6Q25.3) WILD-TYPE
  CLUS_1                       2                            35
  CLUS_2                      12                            31
  CLUS_3                       2                            60
D20V3, multiclass
        clus
vv       DEL PEAK 10(6Q25.3) CNV DEL PEAK 10(6Q25.3) WILD-TYPE
  CLUS_1                      11                            40
  CLUS_2                       2                            40
  CLUS_3                       2                            23
  CLUS_4                       0                            23
D20V4, multiclass
        clus
vv       DEL PEAK 10(6Q25.3) CNV DEL PEAK 10(6Q25.3) WILD-TYPE
  CLUS_1                       4                            19
  CLUS_2                       4                            70
  CLUS_3                       7                            37
D20V5, multiclass
        clus
vv       DEL PEAK 10(6Q25.3) CNV DEL PEAK 10(6Q25.3) WILD-TYPE
  CLUS_1                       2                            32
  CLUS_2                       5                            40
  CLUS_3                       5                            36
  CLUS_4                       3                            19
D20V6, multiclass
        clus
vv       DEL PEAK 10(6Q25.3) CNV DEL PEAK 10(6Q25.3) WILD-TYPE
  CLUS_1                       5                            40
  CLUS_2                       2                            41
  CLUS_3                       8                            46
D20V7, multiclass
        clus
vv       DEL PEAK 10(6Q25.3) CNV DEL PEAK 10(6Q25.3) WILD-TYPE
  CLUS_1                       5                            35
  CLUS_2                       6                            41
  CLUS_3                       3                            36
D20V8, multiclass
        clus
vv       DEL PEAK 10(6Q25.3) CNV DEL PEAK 10(6Q25.3) WILD-TYPE
  CLUS_1                       2                             8
  CLUS_2                       8                            44
  CLUS_3                       4                            60

Clustering(21) Variable = Del Peak 11(9p21.3)
D21V1, multiclass
        clus
vv       DEL PEAK 11(9P21.3) CNV DEL PEAK 11(9P21.3) WILD-TYPE
  CLUS_1                       1                            35
  CLUS_2                      19                            33
  CLUS_3                       4                            66
D21V2, multiclass
        clus
vv       DEL PEAK 11(9P21.3) CNV DEL PEAK 11(9P21.3) WILD-TYPE
  CLUS_1                       4                            33
  CLUS_2                      17                            26
  CLUS_3                       0                            62
D21V3, multiclass
        clus
vv       DEL PEAK 11(9P21.3) CNV DEL PEAK 11(9P21.3) WILD-TYPE
  CLUS_1                      20                            31
  CLUS_2                       0                            42
  CLUS_3                       1                            24
  CLUS_4                       0                            23
D21V4, multiclass
        clus
vv       DEL PEAK 11(9P21.3) CNV DEL PEAK 11(9P21.3) WILD-TYPE
  CLUS_1                       8                            15
  CLUS_2                       3                            71
  CLUS_3                      10                            34
D21V5, multiclass
        clus
vv       DEL PEAK 11(9P21.3) CNV DEL PEAK 11(9P21.3) WILD-TYPE
  CLUS_1                       1                            33
  CLUS_2                      10                            35
  CLUS_3                       5                            36
  CLUS_4                       5                            17
D21V6, multiclass
        clus
vv       DEL PEAK 11(9P21.3) CNV DEL PEAK 11(9P21.3) WILD-TYPE
  CLUS_1                       6                            39
  CLUS_2                       3                            40
  CLUS_3                      12                            42
D21V7, multiclass
        clus
vv       DEL PEAK 11(9P21.3) CNV DEL PEAK 11(9P21.3) WILD-TYPE
  CLUS_1                       4                            36
  CLUS_2                      11                            36
  CLUS_3                       3                            36
D21V8, multiclass
        clus
vv       DEL PEAK 11(9P21.3) CNV DEL PEAK 11(9P21.3) WILD-TYPE
  CLUS_1                       1                             9
  CLUS_2                      14                            38
  CLUS_3                       3                            61

Clustering(22) Variable = Del Peak 12(11q22.3)
D22V1, multiclass
        clus
vv       DEL PEAK 12(11Q22.3) CNV DEL PEAK 12(11Q22.3) WILD-TYPE
  CLUS_1                        0                             36
  CLUS_2                       12                             40
  CLUS_3                        4                             66
D22V2, multiclass
        clus
vv       DEL PEAK 12(11Q22.3) CNV DEL PEAK 12(11Q22.3) WILD-TYPE
  CLUS_1                        2                             35
  CLUS_2                       11                             32
  CLUS_3                        2                             60
D22V3, multiclass
        clus
vv       DEL PEAK 12(11Q22.3) CNV DEL PEAK 12(11Q22.3) WILD-TYPE
  CLUS_1                       13                             38
  CLUS_2                        1                             41
  CLUS_3                        1                             24
  CLUS_4                        0                             23
D22V4, multiclass
        clus
vv       DEL PEAK 12(11Q22.3) CNV DEL PEAK 12(11Q22.3) WILD-TYPE
  CLUS_1                        6                             17
  CLUS_2                        1                             73
  CLUS_3                        8                             36
D22V5, multiclass
        clus
vv       DEL PEAK 12(11Q22.3) CNV DEL PEAK 12(11Q22.3) WILD-TYPE
  CLUS_1                        3                             31
  CLUS_2                        6                             39
  CLUS_3                        2                             39
  CLUS_4                        3                             19
D22V6, multiclass
        clus
vv       DEL PEAK 12(11Q22.3) CNV DEL PEAK 12(11Q22.3) WILD-TYPE
  CLUS_1                        6                             39
  CLUS_2                        1                             42
  CLUS_3                        7                             47
D22V7, multiclass
        clus
vv       DEL PEAK 12(11Q22.3) CNV DEL PEAK 12(11Q22.3) WILD-TYPE
  CLUS_1                        5                             35
  CLUS_2                        6                             41
  CLUS_3                        2                             37
D22V8, multiclass
        clus
vv       DEL PEAK 12(11Q22.3) CNV DEL PEAK 12(11Q22.3) WILD-TYPE
  CLUS_1                        3                              7
  CLUS_2                        7                             45
  CLUS_3                        3                             61

Clustering(23) Variable = Del Peak 13(11q24.2)
D23V1, multiclass
        clus
vv       DEL PEAK 13(11Q24.2) CNV DEL PEAK 13(11Q24.2) WILD-TYPE
  CLUS_1                        1                             35
  CLUS_2                       12                             40
  CLUS_3                        4                             66
D23V2, multiclass
        clus
vv       DEL PEAK 13(11Q24.2) CNV DEL PEAK 13(11Q24.2) WILD-TYPE
  CLUS_1                        2                             35
  CLUS_2                       12                             31
  CLUS_3                        2                             60
D23V3, multiclass
        clus
vv       DEL PEAK 13(11Q24.2) CNV DEL PEAK 13(11Q24.2) WILD-TYPE
  CLUS_1                       13                             38
  CLUS_2                        1                             41
  CLUS_3                        1                             24
  CLUS_4                        1                             22
D23V4, multiclass
        clus
vv       DEL PEAK 13(11Q24.2) CNV DEL PEAK 13(11Q24.2) WILD-TYPE
  CLUS_1                        5                             18
  CLUS_2                        2                             72
  CLUS_3                        9                             35
D23V5, multiclass
        clus
vv       DEL PEAK 13(11Q24.2) CNV DEL PEAK 13(11Q24.2) WILD-TYPE
  CLUS_1                        3                             31
  CLUS_2                        7                             38
  CLUS_3                        2                             39
  CLUS_4                        4                             18
D23V6, multiclass
        clus
vv       DEL PEAK 13(11Q24.2) CNV DEL PEAK 13(11Q24.2) WILD-TYPE
  CLUS_1                        7                             38
  CLUS_2                        1                             42
  CLUS_3                        8                             46
D23V7, multiclass
        clus
vv       DEL PEAK 13(11Q24.2) CNV DEL PEAK 13(11Q24.2) WILD-TYPE
  CLUS_1                        5                             35
  CLUS_2                        7                             40
  CLUS_3                        3                             36
D23V8, multiclass
        clus
vv       DEL PEAK 13(11Q24.2) CNV DEL PEAK 13(11Q24.2) WILD-TYPE
  CLUS_1                        3                              7
  CLUS_2                        8                             44
  CLUS_3                        4                             60

Clustering(24) Variable = Del Peak 14(14q11.2)
D24V1, multiclass
        clus
vv       DEL PEAK 14(14Q11.2) CNV DEL PEAK 14(14Q11.2) WILD-TYPE
  CLUS_1                        3                             33
  CLUS_2                       30                             22
  CLUS_3                        2                             68
D24V2, multiclass
        clus
vv       DEL PEAK 14(14Q11.2) CNV DEL PEAK 14(14Q11.2) WILD-TYPE
  CLUS_1                        9                             28
  CLUS_2                       13                             30
  CLUS_3                        8                             54
D24V3, multiclass
        clus
vv       DEL PEAK 14(14Q11.2) CNV DEL PEAK 14(14Q11.2) WILD-TYPE
  CLUS_1                       19                             32
  CLUS_2                        3                             39
  CLUS_3                        5                             20
  CLUS_4                        4                             19
D24V4, multiclass
        clus
vv       DEL PEAK 14(14Q11.2) CNV DEL PEAK 14(14Q11.2) WILD-TYPE
  CLUS_1                        9                             14
  CLUS_2                       11                             63
  CLUS_3                       11                             33
D24V5, multiclass
        clus
vv       DEL PEAK 14(14Q11.2) CNV DEL PEAK 14(14Q11.2) WILD-TYPE
  CLUS_1                        6                             28
  CLUS_2                       11                             34
  CLUS_3                        9                             32
  CLUS_4                        5                             17
D24V6, multiclass
        clus
vv       DEL PEAK 14(14Q11.2) CNV DEL PEAK 14(14Q11.2) WILD-TYPE
  CLUS_1                       12                             33
  CLUS_2                        7                             36
  CLUS_3                       12                             42
D24V7, multiclass
        clus
vv       DEL PEAK 14(14Q11.2) CNV DEL PEAK 14(14Q11.2) WILD-TYPE
  CLUS_1                        8                             32
  CLUS_2                       11                             36
  CLUS_3                        7                             32
D24V8, multiclass
        clus
vv       DEL PEAK 14(14Q11.2) CNV DEL PEAK 14(14Q11.2) WILD-TYPE
  CLUS_1                        3                              7
  CLUS_2                       13                             39
  CLUS_3                       10                             54

Clustering(25) Variable = Del Peak 15(14q32.2)
D25V1, multiclass
        clus
vv       DEL PEAK 15(14Q32.2) CNV DEL PEAK 15(14Q32.2) WILD-TYPE
  CLUS_1                        2                             34
  CLUS_2                       30                             22
  CLUS_3                        3                             67
D25V2, multiclass
        clus
vv       DEL PEAK 15(14Q32.2) CNV DEL PEAK 15(14Q32.2) WILD-TYPE
  CLUS_1                        9                             28
  CLUS_2                       14                             29
  CLUS_3                        8                             54
D25V3, multiclass
        clus
vv       DEL PEAK 15(14Q32.2) CNV DEL PEAK 15(14Q32.2) WILD-TYPE
  CLUS_1                       19                             32
  CLUS_2                        2                             40
  CLUS_3                        5                             20
  CLUS_4                        3                             20
D25V4, multiclass
        clus
vv       DEL PEAK 15(14Q32.2) CNV DEL PEAK 15(14Q32.2) WILD-TYPE
  CLUS_1                        9                             14
  CLUS_2                        9                             65
  CLUS_3                       11                             33
D25V5, multiclass
        clus
vv       DEL PEAK 15(14Q32.2) CNV DEL PEAK 15(14Q32.2) WILD-TYPE
  CLUS_1                        6                             28
  CLUS_2                       11                             34
  CLUS_3                        8                             33
  CLUS_4                        5                             17
D25V6, multiclass
        clus
vv       DEL PEAK 15(14Q32.2) CNV DEL PEAK 15(14Q32.2) WILD-TYPE
  CLUS_1                       12                             33
  CLUS_2                        6                             37
  CLUS_3                       12                             42
D25V7, multiclass
        clus
vv       DEL PEAK 15(14Q32.2) CNV DEL PEAK 15(14Q32.2) WILD-TYPE
  CLUS_1                        8                             32
  CLUS_2                       11                             36
  CLUS_3                        7                             32
D25V8, multiclass
        clus
vv       DEL PEAK 15(14Q32.2) CNV DEL PEAK 15(14Q32.2) WILD-TYPE
  CLUS_1                        3                              7
  CLUS_2                       13                             39
  CLUS_3                       10                             54

Clustering(26) Variable = Del Peak 16(14q32.2)
D26V1, multiclass
        clus
vv       DEL PEAK 16(14Q32.2) CNV DEL PEAK 16(14Q32.2) WILD-TYPE
  CLUS_1                        2                             34
  CLUS_2                       31                             21
  CLUS_3                        2                             68
D26V2, multiclass
        clus
vv       DEL PEAK 16(14Q32.2) CNV DEL PEAK 16(14Q32.2) WILD-TYPE
  CLUS_1                        9                             28
  CLUS_2                       15                             28
  CLUS_3                        7                             55
D26V3, multiclass
        clus
vv       DEL PEAK 16(14Q32.2) CNV DEL PEAK 16(14Q32.2) WILD-TYPE
  CLUS_1                       20                             31
  CLUS_2                        2                             40
  CLUS_3                        5                             20
  CLUS_4                        3                             20
D26V4, multiclass
        clus
vv       DEL PEAK 16(14Q32.2) CNV DEL PEAK 16(14Q32.2) WILD-TYPE
  CLUS_1                       10                             13
  CLUS_2                        9                             65
  CLUS_3                       11                             33
D26V5, multiclass
        clus
vv       DEL PEAK 16(14Q32.2) CNV DEL PEAK 16(14Q32.2) WILD-TYPE
  CLUS_1                        6                             28
  CLUS_2                       11                             34
  CLUS_3                        8                             33
  CLUS_4                        5                             17
D26V6, multiclass
        clus
vv       DEL PEAK 16(14Q32.2) CNV DEL PEAK 16(14Q32.2) WILD-TYPE
  CLUS_1                       12                             33
  CLUS_2                        6                             37
  CLUS_3                       12                             42
D26V7, multiclass
        clus
vv       DEL PEAK 16(14Q32.2) CNV DEL PEAK 16(14Q32.2) WILD-TYPE
  CLUS_1                        8                             32
  CLUS_2                       11                             36
  CLUS_3                        7                             32
D26V8, multiclass
        clus
vv       DEL PEAK 16(14Q32.2) CNV DEL PEAK 16(14Q32.2) WILD-TYPE
  CLUS_1                        3                              7
  CLUS_2                       13                             39
  CLUS_3                       10                             54

Clustering(27) Variable = Del Peak 17(15q15.1)
D27V1, multiclass
        clus
vv       DEL PEAK 17(15Q15.1) CNV DEL PEAK 17(15Q15.1) WILD-TYPE
  CLUS_1                        2                             34
  CLUS_2                       16                             36
  CLUS_3                        3                             67
D27V2, multiclass
        clus
vv       DEL PEAK 17(15Q15.1) CNV DEL PEAK 17(15Q15.1) WILD-TYPE
  CLUS_1                        7                             30
  CLUS_2                       10                             33
  CLUS_3                        2                             60
D27V3, multiclass
        clus
vv       DEL PEAK 17(15Q15.1) CNV DEL PEAK 17(15Q15.1) WILD-TYPE
  CLUS_1                       14                             37
  CLUS_2                        1                             41
  CLUS_3                        3                             22
  CLUS_4                        0                             23
D27V4, multiclass
        clus
vv       DEL PEAK 17(15Q15.1) CNV DEL PEAK 17(15Q15.1) WILD-TYPE
  CLUS_1                        7                             16
  CLUS_2                        6                             68
  CLUS_3                        5                             39
D27V5, multiclass
        clus
vv       DEL PEAK 17(15Q15.1) CNV DEL PEAK 17(15Q15.1) WILD-TYPE
  CLUS_1                        2                             32
  CLUS_2                        9                             36
  CLUS_3                        4                             37
  CLUS_4                        2                             20
D27V6, multiclass
        clus
vv       DEL PEAK 17(15Q15.1) CNV DEL PEAK 17(15Q15.1) WILD-TYPE
  CLUS_1                        4                             41
  CLUS_2                        3                             40
  CLUS_3                       10                             44
D27V7, multiclass
        clus
vv       DEL PEAK 17(15Q15.1) CNV DEL PEAK 17(15Q15.1) WILD-TYPE
  CLUS_1                        3                             37
  CLUS_2                        8                             39
  CLUS_3                        4                             35
D27V8, multiclass
        clus
vv       DEL PEAK 17(15Q15.1) CNV DEL PEAK 17(15Q15.1) WILD-TYPE
  CLUS_1                        1                              9
  CLUS_2                       10                             42
  CLUS_3                        4                             60

Clustering(28) Variable = Del Peak 18(16q24.1)
D28V1, multiclass
        clus
vv       DEL PEAK 18(16Q24.1) CNV DEL PEAK 18(16Q24.1) WILD-TYPE
  CLUS_1                        0                             36
  CLUS_2                        5                             47
  CLUS_3                        2                             68
D28V2, multiclass
        clus
vv       DEL PEAK 18(16Q24.1) CNV DEL PEAK 18(16Q24.1) WILD-TYPE
  CLUS_1                        0                             37
  CLUS_2                        6                             37
  CLUS_3                        1                             61
D28V3, multiclass
        clus
vv       DEL PEAK 18(16Q24.1) CNV DEL PEAK 18(16Q24.1) WILD-TYPE
  CLUS_1                        6                             45
  CLUS_2                        0                             42
  CLUS_3                        1                             24
  CLUS_4                        0                             23
D28V4, multiclass
        clus
vv       DEL PEAK 18(16Q24.1) CNV DEL PEAK 18(16Q24.1) WILD-TYPE
  CLUS_1                        4                             19
  CLUS_2                        0                             74
  CLUS_3                        3                             41
D28V5, multiclass
        clus
vv       DEL PEAK 18(16Q24.1) CNV DEL PEAK 18(16Q24.1) WILD-TYPE
  CLUS_1                        0                             34
  CLUS_2                        2                             43
  CLUS_3                        1                             40
  CLUS_4                        3                             19
D28V6, multiclass
        clus
vv       DEL PEAK 18(16Q24.1) CNV DEL PEAK 18(16Q24.1) WILD-TYPE
  CLUS_1                        1                             44
  CLUS_2                        1                             42
  CLUS_3                        4                             50
D28V7, multiclass
        clus
vv       DEL PEAK 18(16Q24.1) CNV DEL PEAK 18(16Q24.1) WILD-TYPE
  CLUS_1                        2                             38
  CLUS_2                        2                             45
  CLUS_3                        2                             37
D28V8, multiclass
        clus
vv       DEL PEAK 18(16Q24.1) CNV DEL PEAK 18(16Q24.1) WILD-TYPE
  CLUS_1                        1                              9
  CLUS_2                        4                             48
  CLUS_3                        1                             63

Clustering(29) Variable = Del Peak 19(19p13.3)
D29V1, multiclass
        clus
vv       DEL PEAK 19(19P13.3) CNV DEL PEAK 19(19P13.3) WILD-TYPE
  CLUS_1                        1                             35
  CLUS_2                       13                             39
  CLUS_3                        2                             68
D29V2, multiclass
        clus
vv       DEL PEAK 19(19P13.3) CNV DEL PEAK 19(19P13.3) WILD-TYPE
  CLUS_1                        1                             36
  CLUS_2                       10                             33
  CLUS_3                        4                             58
D29V3, multiclass
        clus
vv       DEL PEAK 19(19P13.3) CNV DEL PEAK 19(19P13.3) WILD-TYPE
  CLUS_1                        9                             42
  CLUS_2                        2                             40
  CLUS_3                        2                             23
  CLUS_4                        0                             23
D29V4, multiclass
        clus
vv       DEL PEAK 19(19P13.3) CNV DEL PEAK 19(19P13.3) WILD-TYPE
  CLUS_1                        1                             22
  CLUS_2                        3                             71
  CLUS_3                        9                             35
D29V5, multiclass
        clus
vv       DEL PEAK 19(19P13.3) CNV DEL PEAK 19(19P13.3) WILD-TYPE
  CLUS_1                        4                             30
  CLUS_2                        4                             41
  CLUS_3                        3                             38
  CLUS_4                        3                             19
D29V6, multiclass
        clus
vv       DEL PEAK 19(19P13.3) CNV DEL PEAK 19(19P13.3) WILD-TYPE
  CLUS_1                        8                             37
  CLUS_2                        2                             41
  CLUS_3                        4                             50
D29V7, multiclass
        clus
vv       DEL PEAK 19(19P13.3) CNV DEL PEAK 19(19P13.3) WILD-TYPE
  CLUS_1                        7                             33
  CLUS_2                        3                             44
  CLUS_3                        3                             36
D29V8, multiclass
        clus
vv       DEL PEAK 19(19P13.3) CNV DEL PEAK 19(19P13.3) WILD-TYPE
  CLUS_1                        3                              7
  CLUS_2                        4                             48
  CLUS_3                        6                             58

Clustering(30) Variable = Del Peak 20(19q13.2)
D30V1, multiclass
        clus
vv       DEL PEAK 20(19Q13.2) CNV DEL PEAK 20(19Q13.2) WILD-TYPE
  CLUS_1                        1                             35
  CLUS_2                       10                             42
  CLUS_3                        3                             67
D30V2, multiclass
        clus
vv       DEL PEAK 20(19Q13.2) CNV DEL PEAK 20(19Q13.2) WILD-TYPE
  CLUS_1                        1                             36
  CLUS_2                        9                             34
  CLUS_3                        4                             58
D30V3, multiclass
        clus
vv       DEL PEAK 20(19Q13.2) CNV DEL PEAK 20(19Q13.2) WILD-TYPE
  CLUS_1                        9                             42
  CLUS_2                        2                             40
  CLUS_3                        0                             25
  CLUS_4                        0                             23
D30V4, multiclass
        clus
vv       DEL PEAK 20(19Q13.2) CNV DEL PEAK 20(19Q13.2) WILD-TYPE
  CLUS_1                        1                             22
  CLUS_2                        2                             72
  CLUS_3                        8                             36
D30V5, multiclass
        clus
vv       DEL PEAK 20(19Q13.2) CNV DEL PEAK 20(19Q13.2) WILD-TYPE
  CLUS_1                        4                             30
  CLUS_2                        3                             42
  CLUS_3                        1                             40
  CLUS_4                        4                             18
D30V6, multiclass
        clus
vv       DEL PEAK 20(19Q13.2) CNV DEL PEAK 20(19Q13.2) WILD-TYPE
  CLUS_1                        6                             39
  CLUS_2                        2                             41
  CLUS_3                        4                             50
D30V7, multiclass
        clus
vv       DEL PEAK 20(19Q13.2) CNV DEL PEAK 20(19Q13.2) WILD-TYPE
  CLUS_1                        8                             32
  CLUS_2                        3                             44
  CLUS_3                        1                             38
D30V8, multiclass
        clus
vv       DEL PEAK 20(19Q13.2) CNV DEL PEAK 20(19Q13.2) WILD-TYPE
  CLUS_1                        2                              8
  CLUS_2                        4                             48
  CLUS_3                        6                             58

Clustering(31) Variable = Del Peak 21(19q13.42)
D31V1, multiclass
        clus
vv       DEL PEAK 21(19Q13.42) CNV DEL PEAK 21(19Q13.42) WILD-TYPE
  CLUS_1                         1                              35
  CLUS_2                        10                              42
  CLUS_3                         4                              66
D31V2, multiclass
        clus
vv       DEL PEAK 21(19Q13.42) CNV DEL PEAK 21(19Q13.42) WILD-TYPE
  CLUS_1                         1                              36
  CLUS_2                         9                              34
  CLUS_3                         5                              57
D31V3, multiclass
        clus
vv       DEL PEAK 21(19Q13.42) CNV DEL PEAK 21(19Q13.42) WILD-TYPE
  CLUS_1                         9                              42
  CLUS_2                         2                              40
  CLUS_3                         1                              24
  CLUS_4                         0                              23
D31V4, multiclass
        clus
vv       DEL PEAK 21(19Q13.42) CNV DEL PEAK 21(19Q13.42) WILD-TYPE
  CLUS_1                         1                              22
  CLUS_2                         3                              71
  CLUS_3                         8                              36
D31V5, multiclass
        clus
vv       DEL PEAK 21(19Q13.42) CNV DEL PEAK 21(19Q13.42) WILD-TYPE
  CLUS_1                         4                              30
  CLUS_2                         3                              42
  CLUS_3                         2                              39
  CLUS_4                         3                              19
D31V6, multiclass
        clus
vv       DEL PEAK 21(19Q13.42) CNV DEL PEAK 21(19Q13.42) WILD-TYPE
  CLUS_1                         6                              39
  CLUS_2                         2                              41
  CLUS_3                         4                              50
D31V7, multiclass
        clus
vv       DEL PEAK 21(19Q13.42) CNV DEL PEAK 21(19Q13.42) WILD-TYPE
  CLUS_1                         7                              33
  CLUS_2                         3                              44
  CLUS_3                         2                              37
D31V8, multiclass
        clus
vv       DEL PEAK 21(19Q13.42) CNV DEL PEAK 21(19Q13.42) WILD-TYPE
  CLUS_1                         1                               9
  CLUS_2                         4                              48
  CLUS_3                         7                              57

Clustering(32) Variable = Del Peak 22(22q12.2)
D32V1, multiclass
        clus
vv       DEL PEAK 22(22Q12.2) CNV DEL PEAK 22(22Q12.2) WILD-TYPE
  CLUS_1                        2                             34
  CLUS_2                       26                             26
  CLUS_3                       12                             58
D32V2, multiclass
        clus
vv       DEL PEAK 22(22Q12.2) CNV DEL PEAK 22(22Q12.2) WILD-TYPE
  CLUS_1                        5                             32
  CLUS_2                       23                             20
  CLUS_3                        9                             53
D32V3, multiclass
        clus
vv       DEL PEAK 22(22Q12.2) CNV DEL PEAK 22(22Q12.2) WILD-TYPE
  CLUS_1                       23                             28
  CLUS_2                        5                             37
  CLUS_3                        5                             20
  CLUS_4                        1                             22
D32V4, multiclass
        clus
vv       DEL PEAK 22(22Q12.2) CNV DEL PEAK 22(22Q12.2) WILD-TYPE
  CLUS_1                        6                             17
  CLUS_2                       10                             64
  CLUS_3                       18                             26
D32V5, multiclass
        clus
vv       DEL PEAK 22(22Q12.2) CNV DEL PEAK 22(22Q12.2) WILD-TYPE
  CLUS_1                        8                             26
  CLUS_2                        9                             36
  CLUS_3                        8                             33
  CLUS_4                       10                             12
D32V6, multiclass
        clus
vv       DEL PEAK 22(22Q12.2) CNV DEL PEAK 22(22Q12.2) WILD-TYPE
  CLUS_1                       17                             28
  CLUS_2                        7                             36
  CLUS_3                       11                             43
D32V7, multiclass
        clus
vv       DEL PEAK 22(22Q12.2) CNV DEL PEAK 22(22Q12.2) WILD-TYPE
  CLUS_1                       14                             26
  CLUS_2                       10                             37
  CLUS_3                        8                             31
D32V8, multiclass
        clus
vv       DEL PEAK 22(22Q12.2) CNV DEL PEAK 22(22Q12.2) WILD-TYPE
  CLUS_1                        4                              6
  CLUS_2                       13                             39
  CLUS_3                       15                             49

Clustering(33) Variable = Del Peak 23(Xq21.31)
D33V1, multiclass
        clus
vv       DEL PEAK 23(XQ21.31) CNV DEL PEAK 23(XQ21.31) WILD-TYPE
  CLUS_1                        1                             35
  CLUS_2                       19                             33
  CLUS_3                        2                             68
D33V2, multiclass
        clus
vv       DEL PEAK 23(XQ21.31) CNV DEL PEAK 23(XQ21.31) WILD-TYPE
  CLUS_1                        2                             35
  CLUS_2                       15                             28
  CLUS_3                        3                             59
D33V3, multiclass
        clus
vv       DEL PEAK 23(XQ21.31) CNV DEL PEAK 23(XQ21.31) WILD-TYPE
  CLUS_1                       15                             36
  CLUS_2                        1                             41
  CLUS_3                        1                             24
  CLUS_4                        0                             23
D33V4, multiclass
        clus
vv       DEL PEAK 23(XQ21.31) CNV DEL PEAK 23(XQ21.31) WILD-TYPE
  CLUS_1                        7                             16
  CLUS_2                        3                             71
  CLUS_3                        7                             37
D33V5, multiclass
        clus
vv       DEL PEAK 23(XQ21.31) CNV DEL PEAK 23(XQ21.31) WILD-TYPE
  CLUS_1                        2                             32
  CLUS_2                        9                             36
  CLUS_3                        3                             38
  CLUS_4                        4                             18
D33V6, multiclass
        clus
vv       DEL PEAK 23(XQ21.31) CNV DEL PEAK 23(XQ21.31) WILD-TYPE
  CLUS_1                        8                             37
  CLUS_2                        2                             41
  CLUS_3                        8                             46
D33V7, multiclass
        clus
vv       DEL PEAK 23(XQ21.31) CNV DEL PEAK 23(XQ21.31) WILD-TYPE
  CLUS_1                        5                             35
  CLUS_2                        9                             38
  CLUS_3                        2                             37
D33V8, multiclass
        clus
vv       DEL PEAK 23(XQ21.31) CNV DEL PEAK 23(XQ21.31) WILD-TYPE
  CLUS_1                        3                              7
  CLUS_2                       10                             42
  CLUS_3                        3                             61

Clustering(34) Variable = Del Peak 24(Xq28)
D34V1, multiclass
        clus
vv       DEL PEAK 24(XQ28) CNV DEL PEAK 24(XQ28) WILD-TYPE
  CLUS_1                     1                          35
  CLUS_2                    18                          34
  CLUS_3                     2                          68
D34V2, multiclass
        clus
vv       DEL PEAK 24(XQ28) CNV DEL PEAK 24(XQ28) WILD-TYPE
  CLUS_1                     2                          35
  CLUS_2                    13                          30
  CLUS_3                     4                          58
D34V3, multiclass
        clus
vv       DEL PEAK 24(XQ28) CNV DEL PEAK 24(XQ28) WILD-TYPE
  CLUS_1                    13                          38
  CLUS_2                     2                          40
  CLUS_3                     1                          24
  CLUS_4                     0                          23
D34V4, multiclass
        clus
vv       DEL PEAK 24(XQ28) CNV DEL PEAK 24(XQ28) WILD-TYPE
  CLUS_1                     6                          17
  CLUS_2                     4                          70
  CLUS_3                     6                          38
D34V5, multiclass
        clus
vv       DEL PEAK 24(XQ28) CNV DEL PEAK 24(XQ28) WILD-TYPE
  CLUS_1                     2                          32
  CLUS_2                     9                          36
  CLUS_3                     4                          37
  CLUS_4                     2                          20
D34V6, multiclass
        clus
vv       DEL PEAK 24(XQ28) CNV DEL PEAK 24(XQ28) WILD-TYPE
  CLUS_1                     6                          39
  CLUS_2                     3                          40
  CLUS_3                     8                          46
D34V7, multiclass
        clus
vv       DEL PEAK 24(XQ28) CNV DEL PEAK 24(XQ28) WILD-TYPE
  CLUS_1                     4                          36
  CLUS_2                     8                          39
  CLUS_3                     3                          36
D34V8, multiclass
        clus
vv       DEL PEAK 24(XQ28) CNV DEL PEAK 24(XQ28) WILD-TYPE
  CLUS_1                     3                           7
  CLUS_2                     8                          44
  CLUS_3                     4                          60
                           V1                            V2 
                    "CN_CNMF"            "METHLYATION_CNMF" 
                           V3                            V4 
               "MRNASEQ_CNMF"       "MRNASEQ_CHIERARCHICAL" 
                           V5                            V6 
                "MIRSEQ_CNMF"        "MIRSEQ_CHIERARCHICAL" 
                           V7                            V8 
         "MIRSEQ_MATURE_CNMF" "MIRSEQ_MATURE_CHIERARCHICAL" 
> q(save="no")
