
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/12/Correlate_Genomic_Events.R")
> result <- main("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/12/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-tTRUE", "-iD=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/OV-TP/4469940/transformed.cor.cli.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPicker/OV-TP/4434824/OV-TP.clin.merged.picked.txt", "-fF=", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=OV-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"       "-oT=OV-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPicker/OV-TP/4434824/OV-TP.clin.merged.picked.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/OV-TP/4469940/transformed.cor.cli.txt"

nPatients in clinical file=579, in cluster file=570, common to both=562
[1]  80 562
[1] "1P GAIN MUTATION ANALYSIS"
[1] 3
  1P GAIN MUTATED 1P GAIN WILD-TYPE 
              161               401 
  1P GAIN MUTATED 1P GAIN WILD-TYPE 
              161               401 
[1] "1Q GAIN MUTATION ANALYSIS"
[1] 3
  1Q GAIN MUTATED 1Q GAIN WILD-TYPE 
              215               347 
  1Q GAIN MUTATED 1Q GAIN WILD-TYPE 
              215               347 
[1] "2P GAIN MUTATION ANALYSIS"
[1] 3
  2P GAIN MUTATED 2P GAIN WILD-TYPE 
              173               389 
  2P GAIN MUTATED 2P GAIN WILD-TYPE 
              173               389 
[1] "2Q GAIN MUTATION ANALYSIS"
[1] 3
  2Q GAIN MUTATED 2Q GAIN WILD-TYPE 
              142               420 
  2Q GAIN MUTATED 2Q GAIN WILD-TYPE 
              142               420 
[1] "3P GAIN MUTATION ANALYSIS"
[1] 3
  3P GAIN MUTATED 3P GAIN WILD-TYPE 
              155               407 
  3P GAIN MUTATED 3P GAIN WILD-TYPE 
              155               407 
[1] "3Q GAIN MUTATION ANALYSIS"
[1] 3
  3Q GAIN MUTATED 3Q GAIN WILD-TYPE 
              264               298 
  3Q GAIN MUTATED 3Q GAIN WILD-TYPE 
              264               298 
[1] "4P GAIN MUTATION ANALYSIS"
[1] 3
  4P GAIN MUTATED 4P GAIN WILD-TYPE 
               51               511 
  4P GAIN MUTATED 4P GAIN WILD-TYPE 
               51               511 
[1] "4Q GAIN MUTATION ANALYSIS"
[1] 3
  4Q GAIN MUTATED 4Q GAIN WILD-TYPE 
               31               531 
  4Q GAIN MUTATED 4Q GAIN WILD-TYPE 
               31               531 
[1] "5P GAIN MUTATION ANALYSIS"
[1] 3
  5P GAIN MUTATED 5P GAIN WILD-TYPE 
              190               372 
  5P GAIN MUTATED 5P GAIN WILD-TYPE 
              190               372 
[1] "5Q GAIN MUTATION ANALYSIS"
[1] 3
  5Q GAIN MUTATED 5Q GAIN WILD-TYPE 
               53               509 
  5Q GAIN MUTATED 5Q GAIN WILD-TYPE 
               53               509 
[1] "6P GAIN MUTATION ANALYSIS"
[1] 3
  6P GAIN MUTATED 6P GAIN WILD-TYPE 
              159               403 
  6P GAIN MUTATED 6P GAIN WILD-TYPE 
              159               403 
[1] "6Q GAIN MUTATION ANALYSIS"
[1] 3
  6Q GAIN MUTATED 6Q GAIN WILD-TYPE 
               92               470 
  6Q GAIN MUTATED 6Q GAIN WILD-TYPE 
               92               470 
[1] "7P GAIN MUTATION ANALYSIS"
[1] 3
  7P GAIN MUTATED 7P GAIN WILD-TYPE 
              174               388 
  7P GAIN MUTATED 7P GAIN WILD-TYPE 
              174               388 
[1] "7Q GAIN MUTATION ANALYSIS"
[1] 3
  7Q GAIN MUTATED 7Q GAIN WILD-TYPE 
              193               369 
  7Q GAIN MUTATED 7Q GAIN WILD-TYPE 
              193               369 
[1] "8P GAIN MUTATION ANALYSIS"
[1] 3
  8P GAIN MUTATED 8P GAIN WILD-TYPE 
              119               443 
  8P GAIN MUTATED 8P GAIN WILD-TYPE 
              119               443 
[1] "8Q GAIN MUTATION ANALYSIS"
[1] 3
  8Q GAIN MUTATED 8Q GAIN WILD-TYPE 
              238               324 
  8Q GAIN MUTATED 8Q GAIN WILD-TYPE 
              238               324 
[1] "9P GAIN MUTATION ANALYSIS"
[1] 3
  9P GAIN MUTATED 9P GAIN WILD-TYPE 
               87               475 
  9P GAIN MUTATED 9P GAIN WILD-TYPE 
               87               475 
[1] "9Q GAIN MUTATION ANALYSIS"
[1] 3
  9Q GAIN MUTATED 9Q GAIN WILD-TYPE 
               41               521 
  9Q GAIN MUTATED 9Q GAIN WILD-TYPE 
               41               521 
[1] "10P GAIN MUTATION ANALYSIS"
[1] 3
  10P GAIN MUTATED 10P GAIN WILD-TYPE 
               178                384 
  10P GAIN MUTATED 10P GAIN WILD-TYPE 
               178                384 
[1] "10Q GAIN MUTATION ANALYSIS"
[1] 3
  10Q GAIN MUTATED 10Q GAIN WILD-TYPE 
               101                461 
  10Q GAIN MUTATED 10Q GAIN WILD-TYPE 
               101                461 
[1] "11P GAIN MUTATION ANALYSIS"
[1] 3
  11P GAIN MUTATED 11P GAIN WILD-TYPE 
                71                491 
  11P GAIN MUTATED 11P GAIN WILD-TYPE 
                71                491 
[1] "11Q GAIN MUTATION ANALYSIS"
[1] 3
  11Q GAIN MUTATED 11Q GAIN WILD-TYPE 
               103                459 
  11Q GAIN MUTATED 11Q GAIN WILD-TYPE 
               103                459 
[1] "12P GAIN MUTATION ANALYSIS"
[1] 3
  12P GAIN MUTATED 12P GAIN WILD-TYPE 
               244                318 
  12P GAIN MUTATED 12P GAIN WILD-TYPE 
               244                318 
[1] "12Q GAIN MUTATION ANALYSIS"
[1] 3
  12Q GAIN MUTATED 12Q GAIN WILD-TYPE 
               168                394 
  12Q GAIN MUTATED 12Q GAIN WILD-TYPE 
               168                394 
[1] "13Q GAIN MUTATION ANALYSIS"
[1] 3
  13Q GAIN MUTATED 13Q GAIN WILD-TYPE 
                57                505 
  13Q GAIN MUTATED 13Q GAIN WILD-TYPE 
                57                505 
[1] "14Q GAIN MUTATION ANALYSIS"
[1] 3
  14Q GAIN MUTATED 14Q GAIN WILD-TYPE 
                56                506 
  14Q GAIN MUTATED 14Q GAIN WILD-TYPE 
                56                506 
[1] "15Q GAIN MUTATION ANALYSIS"
[1] 3
  15Q GAIN MUTATED 15Q GAIN WILD-TYPE 
                39                523 
  15Q GAIN MUTATED 15Q GAIN WILD-TYPE 
                39                523 
[1] "16P GAIN MUTATION ANALYSIS"
[1] 3
  16P GAIN MUTATED 16P GAIN WILD-TYPE 
                58                504 
  16P GAIN MUTATED 16P GAIN WILD-TYPE 
                58                504 
[1] "16Q GAIN MUTATION ANALYSIS"
[1] 3
  16Q GAIN MUTATED 16Q GAIN WILD-TYPE 
                31                531 
  16Q GAIN MUTATED 16Q GAIN WILD-TYPE 
                31                531 
[1] "17P GAIN MUTATION ANALYSIS"
[1] 3
  17P GAIN MUTATED 17P GAIN WILD-TYPE 
                21                541 
  17P GAIN MUTATED 17P GAIN WILD-TYPE 
                21                541 
[1] "17Q GAIN MUTATION ANALYSIS"
[1] 3
  17Q GAIN MUTATED 17Q GAIN WILD-TYPE 
                46                516 
  17Q GAIN MUTATED 17Q GAIN WILD-TYPE 
                46                516 
[1] "18P GAIN MUTATION ANALYSIS"
[1] 3
  18P GAIN MUTATED 18P GAIN WILD-TYPE 
               111                451 
  18P GAIN MUTATED 18P GAIN WILD-TYPE 
               111                451 
[1] "18Q GAIN MUTATION ANALYSIS"
[1] 3
  18Q GAIN MUTATED 18Q GAIN WILD-TYPE 
                65                497 
  18Q GAIN MUTATED 18Q GAIN WILD-TYPE 
                65                497 
[1] "19P GAIN MUTATION ANALYSIS"
[1] 3
  19P GAIN MUTATED 19P GAIN WILD-TYPE 
               159                403 
  19P GAIN MUTATED 19P GAIN WILD-TYPE 
               159                403 
[1] "19Q GAIN MUTATION ANALYSIS"
[1] 3
  19Q GAIN MUTATED 19Q GAIN WILD-TYPE 
               153                409 
  19Q GAIN MUTATED 19Q GAIN WILD-TYPE 
               153                409 
[1] "20P GAIN MUTATION ANALYSIS"
[1] 3
  20P GAIN MUTATED 20P GAIN WILD-TYPE 
               277                285 
  20P GAIN MUTATED 20P GAIN WILD-TYPE 
               277                285 
[1] "20Q GAIN MUTATION ANALYSIS"
[1] 3
  20Q GAIN MUTATED 20Q GAIN WILD-TYPE 
               320                242 
  20Q GAIN MUTATED 20Q GAIN WILD-TYPE 
               320                242 
[1] "21Q GAIN MUTATION ANALYSIS"
[1] 3
  21Q GAIN MUTATED 21Q GAIN WILD-TYPE 
               109                453 
  21Q GAIN MUTATED 21Q GAIN WILD-TYPE 
               109                453 
[1] "22Q GAIN MUTATION ANALYSIS"
[1] 3
  22Q GAIN MUTATED 22Q GAIN WILD-TYPE 
                22                540 
  22Q GAIN MUTATED 22Q GAIN WILD-TYPE 
                22                540 
[1] "XQ GAIN MUTATION ANALYSIS"
[1] 3
  XQ GAIN MUTATED XQ GAIN WILD-TYPE 
              117               445 
  XQ GAIN MUTATED XQ GAIN WILD-TYPE 
              117               445 
[1] "1P LOSS MUTATION ANALYSIS"
[1] 3
  1P LOSS MUTATED 1P LOSS WILD-TYPE 
               62               500 
  1P LOSS MUTATED 1P LOSS WILD-TYPE 
               62               500 
[1] "1Q LOSS MUTATION ANALYSIS"
[1] 3
  1Q LOSS MUTATED 1Q LOSS WILD-TYPE 
               39               523 
  1Q LOSS MUTATED 1Q LOSS WILD-TYPE 
               39               523 
[1] "2P LOSS MUTATION ANALYSIS"
[1] 3
  2P LOSS MUTATED 2P LOSS WILD-TYPE 
               52               510 
  2P LOSS MUTATED 2P LOSS WILD-TYPE 
               52               510 
[1] "2Q LOSS MUTATION ANALYSIS"
[1] 3
  2Q LOSS MUTATED 2Q LOSS WILD-TYPE 
               59               503 
  2Q LOSS MUTATED 2Q LOSS WILD-TYPE 
               59               503 
[1] "3P LOSS MUTATION ANALYSIS"
[1] 3
  3P LOSS MUTATED 3P LOSS WILD-TYPE 
               98               464 
  3P LOSS MUTATED 3P LOSS WILD-TYPE 
               98               464 
[1] "3Q LOSS MUTATION ANALYSIS"
[1] 3
  3Q LOSS MUTATED 3Q LOSS WILD-TYPE 
               44               518 
  3Q LOSS MUTATED 3Q LOSS WILD-TYPE 
               44               518 
[1] "4P LOSS MUTATION ANALYSIS"
[1] 3
  4P LOSS MUTATED 4P LOSS WILD-TYPE 
              304               258 
  4P LOSS MUTATED 4P LOSS WILD-TYPE 
              304               258 
[1] "4Q LOSS MUTATION ANALYSIS"
[1] 3
  4Q LOSS MUTATED 4Q LOSS WILD-TYPE 
              345               217 
  4Q LOSS MUTATED 4Q LOSS WILD-TYPE 
              345               217 
[1] "5P LOSS MUTATION ANALYSIS"
[1] 3
  5P LOSS MUTATED 5P LOSS WILD-TYPE 
              128               434 
  5P LOSS MUTATED 5P LOSS WILD-TYPE 
              128               434 
[1] "5Q LOSS MUTATION ANALYSIS"
[1] 3
  5Q LOSS MUTATED 5Q LOSS WILD-TYPE 
              215               347 
  5Q LOSS MUTATED 5Q LOSS WILD-TYPE 
              215               347 
[1] "6P LOSS MUTATION ANALYSIS"
[1] 3
  6P LOSS MUTATED 6P LOSS WILD-TYPE 
              162               400 
  6P LOSS MUTATED 6P LOSS WILD-TYPE 
              162               400 
[1] "6Q LOSS MUTATION ANALYSIS"
[1] 3
  6Q LOSS MUTATED 6Q LOSS WILD-TYPE 
              236               326 
  6Q LOSS MUTATED 6Q LOSS WILD-TYPE 
              236               326 
[1] "7P LOSS MUTATION ANALYSIS"
[1] 3
  7P LOSS MUTATED 7P LOSS WILD-TYPE 
              113               449 
  7P LOSS MUTATED 7P LOSS WILD-TYPE 
              113               449 
[1] "7Q LOSS MUTATION ANALYSIS"
[1] 3
  7Q LOSS MUTATED 7Q LOSS WILD-TYPE 
               77               485 
  7Q LOSS MUTATED 7Q LOSS WILD-TYPE 
               77               485 
[1] "8P LOSS MUTATION ANALYSIS"
[1] 3
  8P LOSS MUTATED 8P LOSS WILD-TYPE 
              264               298 
  8P LOSS MUTATED 8P LOSS WILD-TYPE 
              264               298 
[1] "8Q LOSS MUTATION ANALYSIS"
[1] 3
  8Q LOSS MUTATED 8Q LOSS WILD-TYPE 
               85               477 
  8Q LOSS MUTATED 8Q LOSS WILD-TYPE 
               85               477 
[1] "9P LOSS MUTATION ANALYSIS"
[1] 3
  9P LOSS MUTATED 9P LOSS WILD-TYPE 
              259               303 
  9P LOSS MUTATED 9P LOSS WILD-TYPE 
              259               303 
[1] "9Q LOSS MUTATION ANALYSIS"
[1] 3
  9Q LOSS MUTATED 9Q LOSS WILD-TYPE 
              284               278 
  9Q LOSS MUTATED 9Q LOSS WILD-TYPE 
              284               278 
[1] "10P LOSS MUTATION ANALYSIS"
[1] 3
  10P LOSS MUTATED 10P LOSS WILD-TYPE 
                95                467 
  10P LOSS MUTATED 10P LOSS WILD-TYPE 
                95                467 
[1] "10Q LOSS MUTATION ANALYSIS"
[1] 3
  10Q LOSS MUTATED 10Q LOSS WILD-TYPE 
               123                439 
  10Q LOSS MUTATED 10Q LOSS WILD-TYPE 
               123                439 
[1] "11P LOSS MUTATION ANALYSIS"
[1] 3
  11P LOSS MUTATED 11P LOSS WILD-TYPE 
               191                371 
  11P LOSS MUTATED 11P LOSS WILD-TYPE 
               191                371 
[1] "11Q LOSS MUTATION ANALYSIS"
[1] 3
  11Q LOSS MUTATED 11Q LOSS WILD-TYPE 
               151                411 
  11Q LOSS MUTATED 11Q LOSS WILD-TYPE 
               151                411 
[1] "12P LOSS MUTATION ANALYSIS"
[1] 3
  12P LOSS MUTATED 12P LOSS WILD-TYPE 
                81                481 
  12P LOSS MUTATED 12P LOSS WILD-TYPE 
                81                481 
[1] "12Q LOSS MUTATION ANALYSIS"
[1] 3
  12Q LOSS MUTATED 12Q LOSS WILD-TYPE 
               103                459 
  12Q LOSS MUTATED 12Q LOSS WILD-TYPE 
               103                459 
[1] "13Q LOSS MUTATION ANALYSIS"
[1] 3
  13Q LOSS MUTATED 13Q LOSS WILD-TYPE 
               299                263 
  13Q LOSS MUTATED 13Q LOSS WILD-TYPE 
               299                263 
[1] "14Q LOSS MUTATION ANALYSIS"
[1] 3
  14Q LOSS MUTATED 14Q LOSS WILD-TYPE 
               205                357 
  14Q LOSS MUTATED 14Q LOSS WILD-TYPE 
               205                357 
[1] "15Q LOSS MUTATION ANALYSIS"
[1] 3
  15Q LOSS MUTATED 15Q LOSS WILD-TYPE 
               266                296 
  15Q LOSS MUTATED 15Q LOSS WILD-TYPE 
               266                296 
[1] "16P LOSS MUTATION ANALYSIS"
[1] 3
  16P LOSS MUTATED 16P LOSS WILD-TYPE 
               323                239 
  16P LOSS MUTATED 16P LOSS WILD-TYPE 
               323                239 
[1] "16Q LOSS MUTATION ANALYSIS"
[1] 3
  16Q LOSS MUTATED 16Q LOSS WILD-TYPE 
               400                162 
  16Q LOSS MUTATED 16Q LOSS WILD-TYPE 
               400                162 
[1] "17P LOSS MUTATION ANALYSIS"
[1] 3
  17P LOSS MUTATED 17P LOSS WILD-TYPE 
               465                 97 
  17P LOSS MUTATED 17P LOSS WILD-TYPE 
               465                 97 
[1] "17Q LOSS MUTATION ANALYSIS"
[1] 3
  17Q LOSS MUTATED 17Q LOSS WILD-TYPE 
               364                198 
  17Q LOSS MUTATED 17Q LOSS WILD-TYPE 
               364                198 
[1] "18P LOSS MUTATION ANALYSIS"
[1] 3
  18P LOSS MUTATED 18P LOSS WILD-TYPE 
               225                337 
  18P LOSS MUTATED 18P LOSS WILD-TYPE 
               225                337 
[1] "18Q LOSS MUTATION ANALYSIS"
[1] 3
  18Q LOSS MUTATED 18Q LOSS WILD-TYPE 
               280                282 
  18Q LOSS MUTATED 18Q LOSS WILD-TYPE 
               280                282 
[1] "19P LOSS MUTATION ANALYSIS"
[1] 3
  19P LOSS MUTATED 19P LOSS WILD-TYPE 
               181                381 
  19P LOSS MUTATED 19P LOSS WILD-TYPE 
               181                381 
[1] "19Q LOSS MUTATION ANALYSIS"
[1] 3
  19Q LOSS MUTATED 19Q LOSS WILD-TYPE 
               170                392 
  19Q LOSS MUTATED 19Q LOSS WILD-TYPE 
               170                392 
[1] "20P LOSS MUTATION ANALYSIS"
[1] 3
  20P LOSS MUTATED 20P LOSS WILD-TYPE 
                50                512 
  20P LOSS MUTATED 20P LOSS WILD-TYPE 
                50                512 
[1] "20Q LOSS MUTATION ANALYSIS"
[1] 3
  20Q LOSS MUTATED 20Q LOSS WILD-TYPE 
                31                531 
  20Q LOSS MUTATED 20Q LOSS WILD-TYPE 
                31                531 
[1] "21Q LOSS MUTATION ANALYSIS"
[1] 3
  21Q LOSS MUTATED 21Q LOSS WILD-TYPE 
               189                373 
  21Q LOSS MUTATED 21Q LOSS WILD-TYPE 
               189                373 
[1] "22Q LOSS MUTATION ANALYSIS"
[1] 3
  22Q LOSS MUTATED 22Q LOSS WILD-TYPE 
               416                146 
  22Q LOSS MUTATED 22Q LOSS WILD-TYPE 
               416                146 
[1] "XQ LOSS MUTATION ANALYSIS"
[1] 3
  XQ LOSS MUTATED XQ LOSS WILD-TYPE 
              281               281 
  XQ LOSS MUTATED XQ LOSS WILD-TYPE 
              281               281 
[1] "terrence_modification_tag"
[1] TRUE
[1] "data2feature, selection="
 [1] "YEARSTOBIRTH"                                      
 [2] "VITALSTATUS"                                       
 [3] "DAYSTODEATH"                                       
 [4] "DAYSTOLASTFOLLOWUP"                                
 [5] "PRIMARYSITEOFDESEASE"                              
 [6] "NEOPLASM.DISEASESTAGE"                             
 [7] "PATHOLOGY.T.STAGE"                                 
 [8] "PATHOLOGY.N.STAGE"                                 
 [9] "PATHOLOGY.M.STAGE"                                 
[10] "DCCUPLOADDATE"                                     
[11] "GENDER"                                            
[12] "DATEOFINITIALPATHOLOGICDIAGNOSIS"                  
[13] "RADIATIONTHERAPY"                                  
[14] "KARNOFSKYPERFORMANCESCORE"                         
[15] "EXAMINATIONS.EXAMINATION.KARNOFSKYPERFORMANCESCORE"
[16] "HISTOLOGICALTYPE"                                  
[17] "TUMORGRADE"                                        
[18] "TUMORSTAGE"                                        
[19] "PATIENTTUMORRECURRENCESTATUS"                      
[20] "DAYSTOTUMORRECURRENCE"                             
[21] "CHEMOTHERAPY"                                      
[22] "RADIATIONS.RADIATION.REGIMENINDICATION"            
[23] "COMPLETENESS.OF.RESECTION"                         
[24] "BATCHNUMBER"                                       

Input Data has 24 rows and 562 columns.

[1] "Batch" "24"   
[1] "Last Follow UP"
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
        1224         1247           55         1495           61         1418 
TCGA-04-1341 TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 
          NA          563          361         1992         1918         1483 
TCGA-04-1349 TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1357 TCGA-04-1360 
         656         1946         1991         1499           NA           NA 
TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 
         989         1348         1024         2328         2174         2505 
TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1519 TCGA-04-1525 TCGA-04-1530 
        1720         1265          608           NA         1167         3622 
TCGA-04-1536 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 TCGA-04-1648 
         884         2561         1685         1487          848          871 
TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 TCGA-04-1655 TCGA-09-0364 
        1966         1102          969         1451         1379           NA 
TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 
          NA           NA           NA           NA           NA           NA 
TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 
          NA           NA           NA         1751         1882         1684 
TCGA-09-1669 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 
         927          547          178           92          260         2967 
TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 
         187          186           NA           NA         3418         2163 
TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 
        1919         1209           NA          819          379         1652 
TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 TCGA-10-0933 
         788         2478          562         1011          982          356 
TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 
         118         1077         1089          460          604          189 
TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 
         748         1355         1204           83          377          945 
TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 
         462          541         1678           75          340          346 
TCGA-13-0760 TCGA-13-0761 TCGA-13-0762 TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 
         351         1036          981          944          651          256 
TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 
        1184         1117          873          923          595          265 
TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 
         237          247          252          249         1333         1073 
TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 
        1073          414         2096         3260         2780         2259 
TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 
        2027         2141         1880         2068         2099         1319 
TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 
        1748         1708         1736          589         1441         1470 
TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 
        1455         1367         1364         1128          842         1036 
TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 TCGA-13-0921 TCGA-13-0923 
         912          643          453          420          141          195 
TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 
         185          331          201          224          184          180 
TCGA-13-1409 TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 
         208          143          128          162         1661         2648 
TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 
        1877          894         2982          629          681         2154 
TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 
        2521         1595         2237         1161         1497          129 
TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 
        1652         1144         1167          425          999          504 
TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 
         128          134          145          126           78          118 
TCGA-13-1512 TCGA-13-2057 TCGA-13-2059 TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 
          94          433          372          261          328          266 
TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 
         191           NA          789          797         2196          836 
TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 
         772          580          507           89           81         1446 
TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 
        1293         1233          468          816          965         1503 
TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 
         268          885          574           68         1562         1658 
TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 
          98          949         2089          139         1013         2616 
TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 
        3953          130          194         1189         1018         1768 
TCGA-23-1809 TCGA-23-2072 TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 
          16          759         3525         2661         2788         2342 
TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 
        1516           84          143          137          232          597 
TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 
         354          663         1264          233          679         1645 
TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 
        1933         1442          192          194          238          243 
TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 TCGA-24-1426 
         239           23          190          183          181          163 
TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 
         146          528          862          583          568         1324 
TCGA-24-1436 TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 TCGA-24-1469 
         260         2218          379         1373         3224          277 
TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 
         104           36          675          820         1745         1955 
TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 
         493         1721         1249         1579         1259         1767 
TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 
        2692         2148         1213          594         1341         1384 
TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 
        1451          787          312          524         2742         2687 
TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 TCGA-24-1845 
        1470         1163          253          106          113          116 
TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 
         133          343          175          167          298          689 
TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 
         919          499          336         2467          148         4623 
TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 
        1364         1769         1059         3336          439         1641 
TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 
         562          857         1947         1353         1736         1100 
TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 
          24           11         1446          962         2143         1356 
TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 
          25         2049         1102          506         1007         1699 
TCGA-24-2298 TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 
        1620           31          819          973         1553         1126 
TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 
          31         1064         1977         1124         1033           91 
TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 
         365           90          565          548          480           11 
TCGA-25-1628 TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 
         626          239            9         1732         1843         1081 
TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 
        1558          454          760          549         2587          396 
TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 
        1492           31         1157           92          365         1369 
TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 
         608         1278           90          882          942          820 
TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 
        2399         1360         1435         3095         1172           24 
TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 TCGA-29-1702 
        1025          948         2077           16          514          567 
TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 
        1815          555         1276          889         1053          517 
TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 
        2606         2031         1914         1189          950          699 
TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 TCGA-29-1776 TCGA-29-1777 
         741          685          526          376          360          374 
TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 
         454          254          219          163         1053         2621 
TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 
        1977         1900         1372          148         1285          360 
TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 TCGA-30-1855 
         349          297         1158         1579         1103           75 
TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 TCGA-30-1861 TCGA-30-1862 
         477            8         1462         1366         1058          185 
TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 
        1114           36         1751          738          914         1484 
TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 
        1386          918          571          683          204         1293 
TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 
        1341           66          874          884          655          695 
TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 
         686          260          914          783          847          737 
TCGA-36-1581 TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2533 TCGA-36-2534 
         751         1066         1004          897           NA          906 
TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 
         788          763          724          657           68          638 
TCGA-36-2545 TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 TCGA-36-2552 
         557          624          431          184          491          349 
TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 
         792          722          287          230          227          681 
TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 
          NA          731          346          643           53          679 
TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 
         881          762          761         5480           NA           NA 
TCGA-59-2351 TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 
        3532           NA           NA           NA          164           NA 
TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 
         338          245          637          955          564          848 
TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 
         132          966          866         1484         1364         1089 
TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 
          74         1024         1329           43          256          176 
TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 
         347          396          276         1038          952         1126 
TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 
        1292         1488         1721         2060         1321          479 
TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 
        1161           60          168          441          547          121 
TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 
         931         1212          932           36         1398         1381 
TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 
         146          145         1573         2182         1875         1776 
TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 
        1844         1992         1688          197         2337          629 
TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
        1354         3824          676          193          945          261 
TCGA-72-4231 TCGA-72-4232 TCGA-72-4233 TCGA-72-4234 TCGA-72-4235 TCGA-72-4236 
          NA           NA           NA           NA           NA           NA 
TCGA-72-4237 TCGA-72-4238 TCGA-72-4240 TCGA-72-4241 
          NA           NA           NA           NA 
Variable 1:'AGE':	nDistinctValues=55,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 2:'VITALSTATUS':	nDistinctValues=2,	numeric=TRUE,	binary=TRUE,	exclude=FALSE.
Variable 3:'DAYSTODEATH':	nDistinctValues=265,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 4:'DAYSTOLASTFOLLOWUP':	nDistinctValues=455,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 5:'PRIMARY.SITE.OF.DISEASE':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'NEOPLASM.DISEASESTAGE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 7:'PATHOLOGY.T.STAGE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 8:'PATHOLOGY.N.STAGE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 9:'PATHOLOGY.M.STAGE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 10:'DCCUPLOADDAY':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 11:'GENDER':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 12:'DAYOFINITIALPATHOLOGICDIAGNOSIS':	nDistinctValues=18,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 13:'RADIATION.THERAPY':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 14:'KARNOFSKY.PERFORMANCE.SCORE':	nDistinctValues=4,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 15:'EXAMINATIONS.EXAMINATION.KARNOFSKYPERFORMANCESCORE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 16:'HISTOLOGICAL.TYPE':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 17:'TUMOR.GRADE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 18:'TUMOR.STAGE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 19:'PATIENTTUMORRECURRENCESTATUS':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 20:'DAYSTOTUMORRECURRENCE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 21:'CHEMOTHERAPY':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 22:'RADIATIONS.RADIATION.REGIMENINDICATION':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 23:'COMPLETENESS.OF.RESECTION':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 24:'BATCH.NUMBER':	nDistinctValues=17,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
[1] "rownames(nsurv.mat)"
[1] "AGE"                                   
[2] "PRIMARY.SITE.OF.DISEASE"               
[3] "KARNOFSKY.PERFORMANCE.SCORE"           
[4] "RADIATIONS.RADIATION.REGIMENINDICATION"
[5] "COMPLETENESS.OF.RESECTION"             
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 562 columns, 1 survival variables, and 5 non-survival variables.
AGE, nv=55, binary=FALSE, numeric=TRUE
PRIMARY.SITE.OF.DISEASE, nv=3, binary=FALSE, numeric=FALSE
KARNOFSKY.PERFORMANCE.SCORE, nv=4, binary=FALSE, numeric=TRUE
RADIATIONS.RADIATION.REGIMENINDICATION, nv=2, binary=FALSE, numeric=FALSE
COMPLETENESS.OF.RESECTION, nv=3, binary=FALSE, numeric=FALSE

Clustering(1) Variable = 1P GAIN MUTATION ANALYSIS
D1V1, survival
                   sevent
clus2                 0   1
  1P GAIN MUTATED    67  89
  1P GAIN WILD-TYPE 194 197
  1P GAIN MUTATED 1P GAIN WILD-TYPE 
              156               391 
  1P GAIN MUTATED 1P GAIN WILD-TYPE 
               89               197 
$`1P GAIN MUTATED`
TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1364 TCGA-04-1525 
       18.51        11.87        65.49        63.06        33.67        38.37 
TCGA-04-1530 TCGA-04-1536 TCGA-04-1649 TCGA-04-1655 TCGA-09-0365 TCGA-09-0366 
      119.08        29.06        64.64        45.34         9.47        57.73 
TCGA-09-0369 TCGA-09-1667 TCGA-09-1670 TCGA-09-2045 TCGA-09-2048 TCGA-09-2051 
       35.54        61.87        17.98        35.15         4.50        63.09 
TCGA-10-0930 TCGA-13-0717 TCGA-13-0723 TCGA-13-0724 TCGA-13-0726 TCGA-13-0751 
       33.24        24.59        39.58         2.73        31.07        55.17 
TCGA-13-0757 TCGA-13-0760 TCGA-13-0795 TCGA-13-0885 TCGA-13-0888 TCGA-13-0893 
       11.18        11.54        19.56        91.40        70.39        43.36 
TCGA-13-0897 TCGA-13-0911 TCGA-13-1408 TCGA-13-1410 TCGA-13-1492 TCGA-13-1495 
       57.47        27.68         5.92         4.70        73.55        49.22 
TCGA-13-1496 TCGA-13-1504 TCGA-13-1506 TCGA-13-1512 TCGA-13-2061 TCGA-20-0987 
        4.24        16.57         4.41         3.09        10.78        23.05 
TCGA-20-0990 TCGA-20-0991 TCGA-23-1031 TCGA-23-1114 TCGA-23-1117 TCGA-23-1118 
       25.94        26.20        18.87        68.68        33.30        86.01 
TCGA-23-1119 TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 TCGA-23-2072 TCGA-23-2077 
      129.96        33.47        58.13         0.53        24.95       115.89 
TCGA-23-2079 TCGA-23-2084 TCGA-24-1104 TCGA-24-1417 TCGA-24-1418 TCGA-24-1431 
       91.66        49.84        63.55         7.82         7.99        19.17 
TCGA-24-1436 TCGA-24-1464 TCGA-24-1466 TCGA-24-1469 TCGA-24-1471 TCGA-24-1474 
        8.55        12.46        45.14         9.11         1.18        22.19 
TCGA-24-1544 TCGA-24-1548 TCGA-24-1549 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 
       26.96        16.21        56.58        39.88        19.53        44.09 
TCGA-24-1564 TCGA-24-1565 TCGA-24-1842 TCGA-24-1843 TCGA-24-1845 TCGA-24-1924 
       25.87        10.26         8.32         3.48         3.81        30.21 
TCGA-24-1928 TCGA-24-1930 TCGA-24-2026 TCGA-24-2029 TCGA-24-2030 TCGA-24-2038 
       11.05        81.11        34.82        14.43        53.95        44.48 
TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2290 TCGA-24-2297 
       47.54        31.63        70.45        44.58        36.23        55.86 
TCGA-25-1312 TCGA-25-1317 TCGA-25-1323 TCGA-25-1329 TCGA-25-1626 TCGA-25-1627 
        1.02         1.02        12.00         2.96        15.78         0.36 
TCGA-25-1633 TCGA-25-1635 TCGA-25-2392 TCGA-25-2400 TCGA-29-1701 TCGA-29-1705 
       60.59        51.22         1.02        42.02        16.90        18.25 
TCGA-29-1707 TCGA-29-1710 TCGA-29-1761 TCGA-29-1763 TCGA-29-1764 TCGA-29-1769 
       41.95        29.23        17.00        66.77        62.93        22.98 
TCGA-29-1770 TCGA-29-1775 TCGA-29-1777 TCGA-29-1783 TCGA-29-1784 TCGA-29-2425 
       24.36        12.36        12.30         7.20         5.36        65.00 
TCGA-29-2432 TCGA-30-1714 TCGA-30-1718 TCGA-30-1855 TCGA-30-1856 TCGA-30-1862 
       11.84        38.07        51.91         2.47        15.68         6.08 
TCGA-30-1866 TCGA-30-1867 TCGA-31-1959 TCGA-36-1577 TCGA-36-1581 TCGA-36-2529 
       36.62         1.18         2.17        25.74        24.69        35.05 
TCGA-36-2551 TCGA-42-2582 TCGA-42-2587 TCGA-57-1582 TCGA-57-1994 TCGA-59-2351 
       16.14        26.04        23.74        24.03        25.02       116.12 
TCGA-59-2355 TCGA-61-1722 TCGA-61-1730 TCGA-61-1733 TCGA-61-1738 TCGA-61-1740 
        2.14         8.05         4.34        31.76        35.80         2.43 
TCGA-61-1741 TCGA-61-1743 TCGA-61-1899 TCGA-61-1904 TCGA-61-1906 TCGA-61-1911 
       33.67        43.69         8.42         9.07        34.13        42.48 
TCGA-61-1914 TCGA-61-1919 TCGA-61-2008 TCGA-61-2009 TCGA-61-2088 TCGA-61-2092 
       56.58        38.17        30.61        39.85         4.77        51.72 
TCGA-61-2097 TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 TCGA-61-2111 TCGA-61-2614 
       60.62         6.48        76.83        20.68       125.72         8.58 

$`1P GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 
       48.76        21.57        63.98        65.46        49.28        32.52 
TCGA-04-1362 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 
       44.32        76.54        71.47        82.36        56.55        41.59 
TCGA-04-1517 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 TCGA-04-1648 
       19.99        84.20        55.40        48.89        27.88        28.64 
TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 TCGA-09-0364 TCGA-09-0367 TCGA-09-1659 
       36.23        31.86        47.70        29.16        17.95         9.96 
TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1668 
       38.43        89.33        74.89        41.59        57.57        55.36 
TCGA-09-1669 TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 
       30.48         5.85         3.02         8.55        97.55         6.15 
TCGA-09-2044 TCGA-09-2049 TCGA-09-2050 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 
        6.12       112.37        71.11        39.75        20.91        26.93 
TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0931 
       12.46        54.31        25.91        81.47        18.48        32.28 
TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 
       11.70         3.88        35.41        35.80        15.12        19.86 
TCGA-13-0714 TCGA-13-0720 TCGA-13-0725 TCGA-13-0727 TCGA-13-0730 TCGA-13-0755 
        6.21        44.55        12.39        15.19        17.79         2.47 
TCGA-13-0758 TCGA-13-0761 TCGA-13-0762 TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 
       11.38        34.06        32.25        31.04        21.40         8.42 
TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0797 TCGA-13-0799 
       38.93        36.72        28.70        30.35         8.71         7.79 
TCGA-13-0800 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 
        8.12         8.28         8.19        43.82        35.28        35.28 
TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 TCGA-13-0886 TCGA-13-0887 TCGA-13-0889 
       13.61        68.91       107.18        74.27        66.64        61.81 
TCGA-13-0890 TCGA-13-0891 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 
       67.99        69.01        56.15        57.07        19.36        47.38 
TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0912 
       48.33        47.84        44.94        44.84        37.08        34.06 
TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 TCGA-13-0921 TCGA-13-0923 
       29.98        21.14        14.89        13.81         4.64         6.41 
TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 TCGA-13-1409 
        6.08        10.88         6.61         7.36         6.05         6.84 
TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 
        4.21         5.33        54.61        87.06        61.71        29.39 
TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 
       98.04        20.68        22.39        70.82        82.88        52.44 
TCGA-13-1494 TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 
       38.17        54.31        37.61        38.37        13.97        32.84 
TCGA-13-1505 TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-2057 
        4.21         4.77         4.14         2.56         3.88        14.24 
TCGA-13-2059 TCGA-13-2060 TCGA-13-2065 TCGA-13-2071 TCGA-20-0996 TCGA-20-1682 
       12.23         8.58         8.75         6.28        72.20        27.48 
TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 
       25.38        19.07        16.67         2.93         2.66        47.54 
TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 
       42.51        40.54        15.39        26.83        31.73        49.41 
TCGA-23-1029 TCGA-23-1030 TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 
        8.81        29.10         2.24        51.35        54.51         3.22 
TCGA-23-1113 TCGA-23-1116 TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-2078 
       31.20         4.57         4.27         6.38        39.09        87.48 
TCGA-23-2081 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 
       77.00         2.76         4.70         4.50         7.63        19.63 
TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 
       11.64        21.80        41.56         7.66        22.32        54.08 
TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 
       47.41         6.31         6.38         7.86         0.76         6.25 
TCGA-24-1424 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 
        6.02         5.95         5.36         4.80        17.36        28.34 
TCGA-24-1434 TCGA-24-1435 TCGA-24-1463 TCGA-24-1467 TCGA-24-1470 TCGA-24-1545 
       18.67        43.53        72.92       105.99         3.42        57.37 
TCGA-24-1546 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 
       64.27        41.06        51.91        41.39        58.09        88.50 
TCGA-24-1556 TCGA-24-1562 TCGA-24-1563 TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 
       70.62        45.50        47.70        17.23        90.15        88.34 
TCGA-24-1614 TCGA-24-1616 TCGA-24-1844 TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 
       48.33        38.24         3.72         4.37        11.28         5.75 
TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 TCGA-24-1927 TCGA-24-2019 TCGA-24-2020 
        5.49         9.80        22.65        16.41         4.87       151.99 
TCGA-24-2023 TCGA-24-2024 TCGA-24-2027 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 
       44.84        58.16       109.68        18.48        28.18        64.01 
TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 TCGA-24-2262 TCGA-24-2288 TCGA-24-2289 
       57.07        36.16         0.79         0.36         0.82        67.36 
TCGA-24-2293 TCGA-24-2295 TCGA-24-2298 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 
       16.64        33.11        53.26        26.93        31.99        51.06 
TCGA-25-1316 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 
       37.02        34.98        65.00        36.95        33.96         2.99 
TCGA-25-1623 TCGA-25-1625 TCGA-25-1628 TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 
       18.58        18.02        20.58         7.86         0.30        56.94 
TCGA-25-1634 TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 
       35.54        14.93        24.99        18.05        85.05        13.02 
TCGA-25-2391 TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 
       49.05        38.04         3.02        12.00        45.01        19.99 
TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 
        2.96        29.00        30.97        26.96        78.87        44.71 
TCGA-29-1691 TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 
       47.18       101.75        38.53         0.79        33.70        31.17 
TCGA-29-1698 TCGA-29-1699 TCGA-29-1702 TCGA-29-1703 TCGA-29-1711 TCGA-29-1762 
       68.28         0.53        18.64        59.67        34.62        85.68 
TCGA-29-1766 TCGA-29-1768 TCGA-29-1771 TCGA-29-1774 TCGA-29-1776 TCGA-29-1778 
       39.09        31.23        22.52        17.29        11.84        14.93 
TCGA-29-1781 TCGA-29-1785 TCGA-29-2414 TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 
        8.35        34.62        86.17        62.47        45.11         4.87 
TCGA-29-2431 TCGA-29-2434 TCGA-29-2436 TCGA-30-1853 TCGA-30-1857 TCGA-30-1859 
       42.25        11.47         9.76        36.26         0.26        48.07 
TCGA-30-1860 TCGA-30-1861 TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 
       44.91        34.78        57.57        24.26        30.05        48.79 
TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 
       45.57        30.18        18.77        22.45         6.71        42.51 
TCGA-31-1956 TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 
       44.09        28.73        29.06        21.53        22.85        22.55 
TCGA-36-1575 TCGA-36-1576 TCGA-36-1578 TCGA-36-1580 TCGA-36-2530 TCGA-36-2532 
        8.55        30.05        27.85        24.23        33.01        29.49 
TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 
       29.79        25.91        25.08        23.80        21.60         2.24 
TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 TCGA-36-2552 
       20.98        18.31        20.52        14.17         6.05        11.47 
TCGA-42-2588 TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1583 
        9.44         7.56         7.46        22.39         1.48        11.38 
TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-59-2348 
       21.14         1.74        22.32        28.96        25.05       180.16 
TCGA-59-2349 TCGA-59-2350 TCGA-59-2352 TCGA-59-2354 TCGA-59-2363 TCGA-59-2372 
       80.12        22.32         9.40        34.39         5.39        44.78 
TCGA-61-1721 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 TCGA-61-1734 
       11.11        20.94        31.40        18.54        27.88        28.47 
TCGA-61-1736 TCGA-61-1737 TCGA-61-1895 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 
       48.79        44.84         1.41         5.79        11.41        13.02 
TCGA-61-1907 TCGA-61-1910 TCGA-61-1913 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 
       31.30        37.02        48.92        67.73        43.43        15.75 
TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 TCGA-61-2012 
        1.97         5.52        14.50        17.98         3.98        30.64 
TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2094 TCGA-61-2095 
        1.18        45.96        45.40         4.80        71.74        61.64 
TCGA-61-2096 TCGA-61-2098 TCGA-61-2101 TCGA-61-2110 TCGA-61-2113 TCGA-61-2612 
       58.39        65.49        55.50        44.52        22.22         6.35 
TCGA-61-2613 
       31.07 

  1P GAIN MUTATED 1P GAIN WILD-TYPE 
             0.36              0.26 
  1P GAIN MUTATED 1P GAIN WILD-TYPE 
           129.96            180.16 
  1P GAIN MUTATED 1P GAIN WILD-TYPE 
            26.12             28.64 
[1] "0.4 - 130.0 (26.1)" "0.3 - 180.2 (28.6)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "1P GAIN MUTATED"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED"   "1P GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "1P GAIN MUTATED" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" "1P GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"1P GAIN WILD-TYPE" "1P GAIN WILD-TYPE"   "1P GAIN MUTATED" 
[1] "hr=" "1.1"
D1V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  1P GAIN MUTATED         1   155                1
  1P GAIN WILD-TYPE       1   393                1
D1V3, multiclass
                  clus
vv                 1P GAIN MUTATED 1P GAIN WILD-TYPE
  OMENTUM                        1                 1
  OVARY                        155               393
  PERITONEUM OVARY               1                 1
D1V4, continuous
D1V5, binary
                   cls
clus                  0   1
  1P GAIN MUTATED     2 159
  1P GAIN WILD-TYPE   1 400
[1] "tbl2"
                   cls
clus                [,1] [,2]
  1P GAIN MUTATED      2  159
  1P GAIN WILD-TYPE    1  400
     clus
vv    1P GAIN MUTATED 1P GAIN WILD-TYPE
  NO                2                 1
  YES             159               400
                   vv
clus                R0 R1 R2
  1P GAIN MUTATED    1  7  0
  1P GAIN WILD-TYPE 13 19  2
D1V6, multiclass
    clus
vv   1P GAIN MUTATED 1P GAIN WILD-TYPE
  R0               1                13
  R1               7                19
  R2               0                 2

Clustering(2) Variable = 1Q GAIN MUTATION ANALYSIS
D2V1, survival
                   sevent
clus2                 0   1
  1Q GAIN MUTATED    93 114
  1Q GAIN WILD-TYPE 168 172
  1Q GAIN MUTATED 1Q GAIN WILD-TYPE 
              207               340 
  1Q GAIN MUTATED 1Q GAIN WILD-TYPE 
              114               172 
$`1Q GAIN MUTATED`
TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1356 TCGA-04-1364 
       18.51        11.87        65.49        63.06        49.28        33.67 
TCGA-04-1514 TCGA-04-1516 TCGA-04-1525 TCGA-04-1530 TCGA-04-1536 TCGA-04-1542 
       56.55        41.59        38.37       119.08        29.06        84.20 
TCGA-04-1638 TCGA-04-1649 TCGA-04-1652 TCGA-04-1655 TCGA-09-0365 TCGA-09-0366 
       55.40        64.64        31.86        45.34         9.47        57.73 
TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 TCGA-09-1667 TCGA-09-1668 TCGA-09-1670 
       35.54         9.96        38.43        61.87        55.36        17.98 
TCGA-09-1672 TCGA-09-1674 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 
        5.85         8.55         6.12        35.15         4.50       112.37 
TCGA-09-2051 TCGA-09-2056 TCGA-10-0930 TCGA-10-0933 TCGA-10-0935 TCGA-10-0938 
       63.09        12.46        33.24        11.70        35.41        19.86 
TCGA-13-0717 TCGA-13-0723 TCGA-13-0724 TCGA-13-0727 TCGA-13-0751 TCGA-13-0757 
       24.59        39.58         2.73        15.19        55.17        11.18 
TCGA-13-0760 TCGA-13-0762 TCGA-13-0795 TCGA-13-0799 TCGA-13-0800 TCGA-13-0888 
       11.54        32.25        19.56         7.79         8.12        70.39 
TCGA-13-0890 TCGA-13-0897 TCGA-13-0901 TCGA-13-0911 TCGA-13-0921 TCGA-13-1408 
       67.99        57.47        19.36        27.68         4.64         5.92 
TCGA-13-1409 TCGA-13-1410 TCGA-13-1481 TCGA-13-1484 TCGA-13-1492 TCGA-13-1495 
        6.84         4.70        87.06        98.04        73.55        49.22 
TCGA-13-1504 TCGA-13-1506 TCGA-13-1512 TCGA-13-2061 TCGA-20-0987 TCGA-20-0990 
       16.57         4.41         3.09        10.78        23.05        25.94 
TCGA-20-0991 TCGA-20-1683 TCGA-20-1684 TCGA-23-1031 TCGA-23-1114 TCGA-23-1118 
       26.20        25.38        19.07        18.87        68.68        86.01 
TCGA-23-1119 TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 TCGA-23-2072 TCGA-23-2077 
      129.96        33.47        58.13         0.53        24.95       115.89 
TCGA-24-0982 TCGA-24-1104 TCGA-24-1413 TCGA-24-1418 TCGA-24-1422 TCGA-24-1423 
       22.32        63.55         6.31         7.99         0.76         6.25 
TCGA-24-1431 TCGA-24-1436 TCGA-24-1464 TCGA-24-1466 TCGA-24-1469 TCGA-24-1471 
       19.17         8.55        12.46        45.14         9.11         1.18 
TCGA-24-1474 TCGA-24-1544 TCGA-24-1548 TCGA-24-1549 TCGA-24-1553 TCGA-24-1557 
       22.19        26.96        16.21        56.58        58.09        39.88 
TCGA-24-1558 TCGA-24-1560 TCGA-24-1564 TCGA-24-1565 TCGA-24-1604 TCGA-24-1842 
       19.53        44.09        25.87        10.26        88.34         8.32 
TCGA-24-1843 TCGA-24-1845 TCGA-24-1850 TCGA-24-1924 TCGA-24-1928 TCGA-24-1930 
        3.48         3.81         5.49        30.21        11.05        81.11 
TCGA-24-2026 TCGA-24-2029 TCGA-24-2030 TCGA-24-2038 TCGA-24-2267 TCGA-24-2271 
       34.82        14.43        53.95        44.48        47.54        31.63 
TCGA-24-2280 TCGA-24-2281 TCGA-24-2290 TCGA-24-2297 TCGA-25-1312 TCGA-25-1316 
       70.45        44.58        36.23        55.86         1.02        37.02 
TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 TCGA-25-1323 
        1.02        34.98        65.00        36.95        33.96        12.00 
TCGA-25-1329 TCGA-25-1626 TCGA-25-1627 TCGA-25-1633 TCGA-25-1634 TCGA-25-1635 
        2.96        15.78         0.36        60.59        35.54        51.22 
TCGA-25-1871 TCGA-25-2392 TCGA-25-2396 TCGA-25-2400 TCGA-29-1688 TCGA-29-1690 
       24.99         1.02         3.02        42.02        78.87        44.71 
TCGA-29-1695 TCGA-29-1701 TCGA-29-1702 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 
        0.79        16.90        18.64        18.25        41.95        29.23 
TCGA-29-1711 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1769 TCGA-29-1770 
       34.62        66.77        62.93        39.09        22.98        24.36 
TCGA-29-1774 TCGA-29-1775 TCGA-29-1777 TCGA-29-1783 TCGA-29-1784 TCGA-29-2425 
       17.29        12.36        12.30         7.20         5.36        65.00 
TCGA-29-2432 TCGA-29-2434 TCGA-30-1714 TCGA-30-1718 TCGA-30-1855 TCGA-30-1856 
       11.84        11.47        38.07        51.91         2.47        15.68 
TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-31-1959 TCGA-36-1569 TCGA-36-1571 
        6.08        36.62         1.18         2.17        29.06        22.85 
TCGA-36-1576 TCGA-36-1581 TCGA-36-2529 TCGA-36-2551 TCGA-36-2552 TCGA-42-2582 
       30.05        24.69        35.05        16.14        11.47        26.04 
TCGA-42-2587 TCGA-57-1582 TCGA-57-1586 TCGA-57-1994 TCGA-59-2351 TCGA-59-2355 
       23.74        24.03        22.32        25.02       116.12         2.14 
TCGA-61-1722 TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 TCGA-61-1738 TCGA-61-1740 
        8.05         4.34        31.76        28.47        35.80         2.43 
TCGA-61-1741 TCGA-61-1743 TCGA-61-1899 TCGA-61-1904 TCGA-61-1906 TCGA-61-1911 
       33.67        43.69         8.42         9.07        34.13        42.48 
TCGA-61-1914 TCGA-61-1919 TCGA-61-2003 TCGA-61-2008 TCGA-61-2009 TCGA-61-2088 
       56.58        38.17         3.98        30.61        39.85         4.77 
TCGA-61-2092 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 
       51.72        60.62        65.49        55.50         6.48        76.83 
TCGA-61-2109 TCGA-61-2111 TCGA-61-2614 
       20.68       125.72         8.58 

$`1Q GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 TCGA-04-1351 TCGA-04-1361 TCGA-04-1362 
       48.76        21.57        63.98        65.46        32.52        44.32 
TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1517 TCGA-04-1644 TCGA-04-1646 
       76.54        71.47        82.36        19.99        48.89        27.88 
TCGA-04-1648 TCGA-04-1651 TCGA-04-1654 TCGA-09-0364 TCGA-09-0367 TCGA-09-1662 
       28.64        36.23        47.70        29.16        17.95        89.33 
TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1669 TCGA-09-1673 TCGA-09-1675 
       74.89        41.59        57.57        30.48         3.02        97.55 
TCGA-09-2043 TCGA-09-2050 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-10-0925 
        6.15        71.11        39.75        20.91        26.93        54.31 
TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0931 TCGA-10-0934 TCGA-10-0936 
       25.91        81.47        18.48        32.28         3.88        35.80 
TCGA-10-0937 TCGA-13-0714 TCGA-13-0720 TCGA-13-0725 TCGA-13-0726 TCGA-13-0730 
       15.12         6.21        44.55        12.39        31.07        17.79 
TCGA-13-0755 TCGA-13-0758 TCGA-13-0761 TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 
        2.47        11.38        34.06        31.04        21.40         8.42 
TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0797 TCGA-13-0801 
       38.93        36.72        28.70        30.35         8.71         8.28 
TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 
        8.19        43.82        35.28        35.28        13.61        68.91 
TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0889 TCGA-13-0891 
      107.18        91.40        74.27        66.64        61.81        69.01 
TCGA-13-0893 TCGA-13-0899 TCGA-13-0900 TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 
       43.36        56.15        57.07        47.38        48.33        47.84 
TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 
       44.94        44.84        37.08        34.06        29.98        21.14 
TCGA-13-0919 TCGA-13-0920 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 
       14.89        13.81         6.41         6.08        10.88         6.61 
TCGA-13-1405 TCGA-13-1407 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 TCGA-13-1482 
        7.36         6.05         4.21         5.33        54.61        61.71 
TCGA-13-1483 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 
       29.39        20.68        22.39        70.82        82.88        52.44 
TCGA-13-1494 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 
       38.17         4.24        54.31        37.61        38.37        13.97 
TCGA-13-1501 TCGA-13-1505 TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 
       32.84         4.21         4.77         4.14         2.56         3.88 
TCGA-13-2057 TCGA-13-2059 TCGA-13-2060 TCGA-13-2065 TCGA-13-2071 TCGA-20-0996 
       14.24        12.23         8.58         8.75         6.28        72.20 
TCGA-20-1682 TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 TCGA-23-1022 
       27.48        16.67         2.93         2.66        47.54        42.51 
TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 
       40.54        15.39        26.83        31.73        49.41         8.81 
TCGA-23-1030 TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 
       29.10         2.24        51.35        54.51         3.22        31.20 
TCGA-23-1116 TCGA-23-1117 TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-2078 
        4.57        33.30         4.27         6.38        39.09        87.48 
TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 
       91.66        77.00        49.84         2.76         4.70         4.50 
TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 
        7.63        19.63        11.64        21.80        41.56         7.66 
TCGA-24-1103 TCGA-24-1105 TCGA-24-1416 TCGA-24-1417 TCGA-24-1419 TCGA-24-1424 
       54.08        47.41         6.38         7.82         7.86         6.02 
TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 TCGA-24-1434 
        5.95         5.36         4.80        17.36        28.34        18.67 
TCGA-24-1435 TCGA-24-1463 TCGA-24-1467 TCGA-24-1470 TCGA-24-1545 TCGA-24-1546 
       43.53        72.92       105.99         3.42        57.37        64.27 
TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1555 TCGA-24-1556 TCGA-24-1562 
       41.06        51.91        41.39        88.50        70.62        45.50 
TCGA-24-1563 TCGA-24-1567 TCGA-24-1603 TCGA-24-1614 TCGA-24-1616 TCGA-24-1844 
       47.70        17.23        90.15        48.33        38.24         3.72 
TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 TCGA-24-1920 TCGA-24-1923 TCGA-24-1927 
        4.37        11.28         5.75         9.80        22.65        16.41 
TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 TCGA-24-2027 TCGA-24-2033 
        4.87       151.99        44.84        58.16       109.68        18.48 
TCGA-24-2035 TCGA-24-2036 TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 TCGA-24-2262 
       28.18        64.01        57.07        36.16         0.79         0.36 
TCGA-24-2288 TCGA-24-2289 TCGA-24-2293 TCGA-24-2295 TCGA-24-2298 TCGA-25-1313 
        0.82        67.36        16.64        33.11        53.26        26.93 
TCGA-25-1314 TCGA-25-1315 TCGA-25-1322 TCGA-25-1623 TCGA-25-1625 TCGA-25-1628 
       31.99        51.06         2.99        18.58        18.02        20.58 
TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1870 TCGA-25-1877 TCGA-25-1878 
        7.86         0.30        56.94        14.93        18.05        85.05 
TCGA-25-2042 TCGA-25-2391 TCGA-25-2393 TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 
       13.02        49.05        38.04        12.00        45.01        19.99 
TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1691 TCGA-29-1693 
        2.96        29.00        30.97        26.96        47.18       101.75 
TCGA-29-1694 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1703 
       38.53        33.70        31.17        68.28         0.53        59.67 
TCGA-29-1761 TCGA-29-1762 TCGA-29-1768 TCGA-29-1771 TCGA-29-1776 TCGA-29-1778 
       17.00        85.68        31.23        22.52        11.84        14.93 
TCGA-29-1781 TCGA-29-1785 TCGA-29-2414 TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 
        8.35        34.62        86.17        62.47        45.11         4.87 
TCGA-29-2431 TCGA-29-2436 TCGA-30-1853 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 
       42.25         9.76        36.26         0.26        48.07        44.91 
TCGA-30-1861 TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 
       34.78        57.57        24.26        30.05        48.79        45.57 
TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 
       30.18        18.77        22.45         6.71        42.51        44.09 
TCGA-36-1568 TCGA-36-1570 TCGA-36-1574 TCGA-36-1575 TCGA-36-1577 TCGA-36-1578 
       28.73        21.53        22.55         8.55        25.74        27.85 
TCGA-36-1580 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 
       24.23        33.01        29.49        29.79        25.91        25.08 
TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 
       23.80        21.60         2.24        20.98        18.31        20.52 
TCGA-36-2548 TCGA-36-2549 TCGA-42-2588 TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 
       14.17         6.05         9.44         7.56         7.46        22.39 
TCGA-42-2593 TCGA-57-1583 TCGA-57-1584 TCGA-57-1585 TCGA-57-1992 TCGA-57-1993 
        1.48        11.38        21.14         1.74        28.96        25.05 
TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2352 TCGA-59-2354 TCGA-59-2363 
      180.16        80.12        22.32         9.40        34.39         5.39 
TCGA-59-2372 TCGA-61-1721 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 
       44.78        11.11        20.94        31.40        18.54        27.88 
TCGA-61-1736 TCGA-61-1737 TCGA-61-1895 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 
       48.79        44.84         1.41         5.79        11.41        13.02 
TCGA-61-1907 TCGA-61-1910 TCGA-61-1913 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 
       31.30        37.02        48.92        67.73        43.43        15.75 
TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2012 TCGA-61-2016 
        1.97         5.52        14.50        17.98        30.64         1.18 
TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 
       45.96        45.40         4.80        71.74        61.64        58.39 
TCGA-61-2110 TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 
       44.52        22.22         6.35        31.07 

  1Q GAIN MUTATED 1Q GAIN WILD-TYPE 
             0.36              0.26 
  1Q GAIN MUTATED 1Q GAIN WILD-TYPE 
           129.96            180.16 
  1Q GAIN MUTATED 1Q GAIN WILD-TYPE 
           26.040            28.715 
[1] "0.4 - 130.0 (26.0)" "0.3 - 180.2 (28.7)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED"   "1Q GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" "1Q GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"1Q GAIN WILD-TYPE" "1Q GAIN WILD-TYPE"   "1Q GAIN MUTATED" 
[1] "hr=" "1.1"
D2V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  1Q GAIN MUTATED         1   205                2
  1Q GAIN WILD-TYPE       1   343                0
D2V3, multiclass
                  clus
vv                 1Q GAIN MUTATED 1Q GAIN WILD-TYPE
  OMENTUM                        1                 1
  OVARY                        205               343
  PERITONEUM OVARY               2                 0
D2V4, continuous
D2V5, binary
                   cls
clus                  0   1
  1Q GAIN MUTATED     1 214
  1Q GAIN WILD-TYPE   2 345
[1] "tbl2"
                   cls
clus                [,1] [,2]
  1Q GAIN MUTATED      1  214
  1Q GAIN WILD-TYPE    2  345
     clus
vv    1Q GAIN MUTATED 1Q GAIN WILD-TYPE
  NO                1                 2
  YES             214               345
                   vv
clus                R0 R1 R2
  1Q GAIN MUTATED    4  7  0
  1Q GAIN WILD-TYPE 10 19  2
D2V6, multiclass
    clus
vv   1Q GAIN MUTATED 1Q GAIN WILD-TYPE
  R0               4                10
  R1               7                19
  R2               0                 2

Clustering(3) Variable = 2P GAIN MUTATION ANALYSIS
D3V1, survival
                   sevent
clus2                 0   1
  2P GAIN MUTATED    77  90
  2P GAIN WILD-TYPE 184 196
  2P GAIN MUTATED 2P GAIN WILD-TYPE 
              167               380 
  2P GAIN MUTATED 2P GAIN WILD-TYPE 
               90               196 
$`2P GAIN MUTATED`
TCGA-04-1336 TCGA-04-1342 TCGA-04-1347 TCGA-04-1350 TCGA-04-1356 TCGA-04-1364 
       49.15        18.51        63.06        63.98        49.28        33.67 
TCGA-04-1371 TCGA-04-1525 TCGA-04-1542 TCGA-04-1646 TCGA-04-1655 TCGA-09-0364 
       82.36        38.37        84.20        27.88        45.34        29.16 
TCGA-09-0365 TCGA-09-0366 TCGA-09-0369 TCGA-09-1661 TCGA-09-1672 TCGA-09-1674 
        9.47        57.73        35.54        38.43         5.85         8.55 
TCGA-09-2043 TCGA-09-2048 TCGA-10-0927 TCGA-10-0930 TCGA-10-0933 TCGA-10-0935 
        6.15         4.50        81.47        33.24        11.70        35.41 
TCGA-10-0938 TCGA-13-0724 TCGA-13-0730 TCGA-13-0757 TCGA-13-0760 TCGA-13-0800 
       19.86         2.73        17.79        11.18        11.54         8.12 
TCGA-13-0802 TCGA-13-0884 TCGA-13-0888 TCGA-13-0893 TCGA-13-0899 TCGA-13-0901 
        8.19       107.18        70.39        43.36        56.15        19.36 
TCGA-13-0906 TCGA-13-0920 TCGA-13-0921 TCGA-13-1407 TCGA-13-1409 TCGA-13-1410 
       44.94        13.81         4.64         6.05         6.84         4.70 
TCGA-13-1412 TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-2057 TCGA-13-2060 
        5.33        32.84        16.57         4.21        14.24         8.58 
TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 TCGA-23-1024 TCGA-23-1114 TCGA-23-1119 
        2.93         2.66        47.54        15.39        68.68       129.96 
TCGA-23-1121 TCGA-23-1122 TCGA-23-1809 TCGA-23-2072 TCGA-23-2078 TCGA-23-2643 
        6.38        39.09         0.53        24.95        87.48         4.70 
TCGA-24-0970 TCGA-24-1417 TCGA-24-1422 TCGA-24-1424 TCGA-24-1436 TCGA-24-1467 
       11.64         7.82         0.76         6.02         8.55       105.99 
TCGA-24-1469 TCGA-24-1474 TCGA-24-1544 TCGA-24-1552 TCGA-24-1553 TCGA-24-1558 
        9.11        22.19        26.96        41.39        58.09        19.53 
TCGA-24-1560 TCGA-24-1604 TCGA-24-1616 TCGA-24-1842 TCGA-24-1844 TCGA-24-1845 
       44.09        88.34        38.24         8.32         3.72         3.81 
TCGA-24-1850 TCGA-24-1924 TCGA-24-1928 TCGA-24-2019 TCGA-24-2029 TCGA-24-2033 
        5.49        30.21        11.05         4.87        14.43        18.48 
TCGA-24-2261 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 TCGA-24-2295 TCGA-25-1312 
        0.79        44.58         0.82        67.36        33.11         1.02 
TCGA-25-1315 TCGA-25-1317 TCGA-25-1319 TCGA-25-1320 TCGA-25-1329 TCGA-25-1623 
       51.06         1.02        65.00        36.95         2.96        18.58 
TCGA-25-1626 TCGA-25-1628 TCGA-25-1631 TCGA-25-1634 TCGA-25-1870 TCGA-25-1877 
       15.78        20.58         0.30        35.54        14.93        18.05 
TCGA-25-2391 TCGA-25-2393 TCGA-25-2398 TCGA-25-2400 TCGA-25-2409 TCGA-29-1691 
       49.05        38.04        45.01        42.02        26.96        47.18 
TCGA-29-1695 TCGA-29-1698 TCGA-29-1701 TCGA-29-1702 TCGA-29-1763 TCGA-29-1764 
        0.79        68.28        16.90        18.64        66.77        62.93 
TCGA-29-1769 TCGA-29-1774 TCGA-29-1775 TCGA-29-1778 TCGA-29-2425 TCGA-29-2429 
       22.98        17.29        12.36        14.93        65.00         4.87 
TCGA-30-1714 TCGA-30-1718 TCGA-30-1859 TCGA-30-1862 TCGA-31-1950 TCGA-31-1953 
       38.07        51.91        48.07         6.08        18.77         6.71 
TCGA-31-1959 TCGA-36-1571 TCGA-36-1575 TCGA-36-1576 TCGA-36-1578 TCGA-36-1581 
        2.17        22.85         8.55        30.05        27.85        24.69 
TCGA-36-2547 TCGA-36-2552 TCGA-42-2587 TCGA-42-2589 TCGA-57-1582 TCGA-57-1583 
       20.52        11.47        23.74         7.56        24.03        11.38 
TCGA-57-1585 TCGA-57-1586 TCGA-57-1994 TCGA-59-2348 TCGA-59-2352 TCGA-59-2372 
        1.74        22.32        25.02       180.16         9.40        44.78 
TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 TCGA-61-1741 TCGA-61-1899 TCGA-61-1900 
       27.88         4.34        31.76        33.67         8.42         5.79 
TCGA-61-1904 TCGA-61-1914 TCGA-61-1919 TCGA-61-2000 TCGA-61-2003 TCGA-61-2009 
        9.07        56.58        38.17        14.50         3.98        39.85 
TCGA-61-2018 TCGA-61-2088 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 
       45.40         4.77        60.62        65.49        55.50         6.48 
TCGA-61-2104 TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 TCGA-61-2614 
       76.83       125.72        22.22         6.35         8.58 

$`2P GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1337 TCGA-04-1338 TCGA-04-1343 
       40.24        41.00         1.81         2.01        46.62        11.87 
TCGA-04-1346 TCGA-04-1348 TCGA-04-1349 TCGA-04-1351 TCGA-04-1361 TCGA-04-1362 
       65.49        48.76        21.57        65.46        32.52        44.32 
TCGA-04-1365 TCGA-04-1367 TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1530 
       76.54        71.47        56.55        41.59        19.99       119.08 
TCGA-04-1536 TCGA-04-1638 TCGA-04-1644 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 
       29.06        55.40        48.89        28.64        64.64        36.23 
TCGA-04-1652 TCGA-04-1654 TCGA-09-0367 TCGA-09-1659 TCGA-09-1662 TCGA-09-1664 
       31.86        47.70        17.95         9.96        89.33        74.89 
TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 
       41.59        57.57        61.87        55.36        30.48        17.98 
TCGA-09-1673 TCGA-09-1675 TCGA-09-2044 TCGA-09-2045 TCGA-09-2049 TCGA-09-2050 
        3.02        97.55         6.12        35.15       112.37        71.11 
TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 
       63.09        39.75        20.91        26.93        12.46        54.31 
TCGA-10-0926 TCGA-10-0928 TCGA-10-0931 TCGA-10-0934 TCGA-10-0936 TCGA-10-0937 
       25.91        18.48        32.28         3.88        35.80        15.12 
TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0725 TCGA-13-0726 
        6.21        24.59        44.55        39.58        12.39        31.07 
TCGA-13-0727 TCGA-13-0751 TCGA-13-0755 TCGA-13-0758 TCGA-13-0761 TCGA-13-0762 
       15.19        55.17         2.47        11.38        34.06        32.25 
TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 
       31.04        21.40         8.42        38.93        36.72        28.70 
TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0801 TCGA-13-0803 
       30.35        19.56         8.71         7.79         8.28        43.82 
TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0885 TCGA-13-0886 
       35.28        35.28        13.61        68.91        91.40        74.27 
TCGA-13-0887 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0897 TCGA-13-0900 
       66.64        61.81        67.99        69.01        57.47        57.07 
TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 
       47.38        48.33        47.84        44.84        37.08        27.68 
TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0923 TCGA-13-0924 
       34.06        29.98        21.14        14.89         6.41         6.08 
TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1408 TCGA-13-1411 TCGA-13-1477 
       10.88         6.61         7.36         5.92         4.21        54.61 
TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 
       87.06        61.71        29.39        98.04        20.68        22.39 
TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 
       70.82        82.88        52.44        73.55        38.17        49.22 
TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1506 
        4.24        54.31        37.61        38.37        13.97         4.41 
TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2059 
        4.77         4.14         2.56         3.88         3.09        12.23 
TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 
       10.78         8.75         6.28        23.05        25.94        26.20 
TCGA-20-0996 TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-23-1022 
       72.20        27.48        25.38        19.07        16.67        42.51 
TCGA-23-1023 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 
       40.54        26.83        31.73        49.41         8.81        29.10 
TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 
       18.87         2.24        51.35        54.51         3.22        31.20 
TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1120 TCGA-23-1123 TCGA-23-1124 
        4.57        33.30        86.01         4.27        33.47        58.13 
TCGA-23-2077 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2645 
      115.89        91.66        77.00        49.84         2.76         4.50 
TCGA-24-0966 TCGA-24-0968 TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 
        7.63        19.63        21.80        41.56         7.66        22.32 
TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1418 
       54.08        63.55        47.41         6.31         6.38         7.99 
TCGA-24-1419 TCGA-24-1423 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 
        7.86         6.25         5.95         5.36         4.80        17.36 
TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 TCGA-24-1463 TCGA-24-1464 
       28.34        19.17        18.67        43.53        72.92        12.46 
TCGA-24-1466 TCGA-24-1470 TCGA-24-1471 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 
       45.14         3.42         1.18        57.37        64.27        16.21 
TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 
       56.58        41.06        51.91        88.50        70.62        39.88 
TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 
       45.50        47.70        25.87        10.26        17.23        90.15 
TCGA-24-1614 TCGA-24-1843 TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 TCGA-24-1920 
       48.33         3.48         4.37        11.28         5.75         9.80 
TCGA-24-1923 TCGA-24-1927 TCGA-24-1930 TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 
       22.65        16.41        81.11       151.99        44.84        58.16 
TCGA-24-2026 TCGA-24-2027 TCGA-24-2030 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 
       34.82       109.68        53.95        28.18        64.01        44.48 
TCGA-24-2254 TCGA-24-2260 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 
       57.07        36.16         0.36        47.54        31.63        70.45 
TCGA-24-2290 TCGA-24-2293 TCGA-24-2297 TCGA-24-2298 TCGA-25-1313 TCGA-25-1314 
       36.23        16.64        55.86        53.26        26.93        31.99 
TCGA-25-1316 TCGA-25-1318 TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1625 
       37.02        34.98        33.96         2.99        12.00        18.02 
TCGA-25-1627 TCGA-25-1630 TCGA-25-1632 TCGA-25-1633 TCGA-25-1635 TCGA-25-1871 
        0.36         7.86        56.94        60.59        51.22        24.99 
TCGA-25-1878 TCGA-25-2042 TCGA-25-2392 TCGA-25-2396 TCGA-25-2397 TCGA-25-2399 
       85.05        13.02         1.02         3.02        12.00        19.99 
TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-29-1688 TCGA-29-1690 TCGA-29-1693 
        2.96        29.00        30.97        78.87        44.71       101.75 
TCGA-29-1694 TCGA-29-1696 TCGA-29-1697 TCGA-29-1699 TCGA-29-1703 TCGA-29-1705 
       38.53        33.70        31.17         0.53        59.67        18.25 
TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 TCGA-29-1766 
       41.95        29.23        34.62        17.00        85.68        39.09 
TCGA-29-1768 TCGA-29-1770 TCGA-29-1771 TCGA-29-1776 TCGA-29-1777 TCGA-29-1781 
       31.23        24.36        22.52        11.84        12.30         8.35 
TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 TCGA-29-2427 TCGA-29-2428 
        7.20         5.36        34.62        86.17        62.47        45.11 
TCGA-29-2431 TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 TCGA-30-1853 TCGA-30-1855 
       42.25        11.84        11.47         9.76        36.26         2.47 
TCGA-30-1856 TCGA-30-1857 TCGA-30-1860 TCGA-30-1861 TCGA-30-1866 TCGA-30-1867 
       15.68         0.26        44.91        34.78        36.62         1.18 
TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 
       57.57        24.26        30.05        48.79        45.57        30.18 
TCGA-31-1951 TCGA-31-1955 TCGA-31-1956 TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 
       22.45        42.51        44.09        28.73        29.06        21.53 
TCGA-36-1574 TCGA-36-1577 TCGA-36-1580 TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 
       22.55        25.74        24.23        35.05        33.01        29.49 
TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 
       29.79        25.91        25.08        23.80        21.60         2.24 
TCGA-36-2544 TCGA-36-2545 TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 TCGA-42-2582 
       20.98        18.31        14.17         6.05        16.14        26.04 
TCGA-42-2588 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1584 TCGA-57-1992 
        9.44         7.46        22.39         1.48        21.14        28.96 
TCGA-57-1993 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2354 TCGA-59-2355 
       25.05        80.12        22.32       116.12        34.39         2.14 
TCGA-59-2363 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 
        5.39        11.11         8.05        20.94        31.40        18.54 
TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1743 
       28.47        48.79        44.84        35.80         2.43        43.69 
TCGA-61-1895 TCGA-61-1901 TCGA-61-1903 TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 
        1.41        11.41        13.02        34.13        31.30        37.02 
TCGA-61-1911 TCGA-61-1913 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-1995 
       42.48        48.92        67.73        43.43        15.75         1.97 
TCGA-61-1998 TCGA-61-2002 TCGA-61-2008 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 
        5.52        17.98        30.61        30.64         1.18        45.96 
TCGA-61-2087 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2109 
        4.80        51.72        71.74        61.64        58.39        20.68 
TCGA-61-2110 TCGA-61-2613 
       44.52        31.07 

  2P GAIN MUTATED 2P GAIN WILD-TYPE 
             0.30              0.26 
  2P GAIN MUTATED 2P GAIN WILD-TYPE 
           180.16            151.99 
  2P GAIN MUTATED 2P GAIN WILD-TYPE 
           20.520            30.115 
[1] "0.3 - 180.2 (20.5)" "0.3 - 152.0 (30.1)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "2P GAIN MUTATED"   "2P GAIN MUTATED"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
  "2P GAIN MUTATED"   "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "2P GAIN MUTATED"   "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "2P GAIN MUTATED"   "2P GAIN MUTATED"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "2P GAIN MUTATED"   "2P GAIN MUTATED"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
  "2P GAIN MUTATED"   "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "2P GAIN MUTATED"   "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "2P GAIN MUTATED"   "2P GAIN MUTATED"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "2P GAIN MUTATED"   "2P GAIN MUTATED"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
  "2P GAIN MUTATED"   "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "2P GAIN MUTATED"   "2P GAIN MUTATED"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" "2P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "2P GAIN MUTATED"   "2P GAIN MUTATED"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"2P GAIN WILD-TYPE" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED"   "2P GAIN MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "2P GAIN MUTATED" "2P GAIN WILD-TYPE"   "2P GAIN MUTATED" 
[1] "hr=" "1.2"
D3V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  2P GAIN MUTATED         0   168                0
  2P GAIN WILD-TYPE       2   380                2
D3V3, multiclass
                  clus
vv                 2P GAIN MUTATED 2P GAIN WILD-TYPE
  OMENTUM                        0                 2
  OVARY                        168               380
  PERITONEUM OVARY               0                 2
D3V4, continuous
D3V5, binary
                   cls
clus                  0   1
  2P GAIN MUTATED     1 172
  2P GAIN WILD-TYPE   2 387
[1] "tbl2"
                   cls
clus                [,1] [,2]
  2P GAIN MUTATED      1  172
  2P GAIN WILD-TYPE    2  387
     clus
vv    2P GAIN MUTATED 2P GAIN WILD-TYPE
  NO                1                 2
  YES             172               387
                   vv
clus                R0 R1 R2
  2P GAIN MUTATED    4  6  0
  2P GAIN WILD-TYPE 10 20  2
D3V6, multiclass
    clus
vv   2P GAIN MUTATED 2P GAIN WILD-TYPE
  R0               4                10
  R1               6                20
  R2               0                 2

Clustering(4) Variable = 2Q GAIN MUTATION ANALYSIS
D4V1, survival
                   sevent
clus2                 0   1
  2Q GAIN MUTATED    59  79
  2Q GAIN WILD-TYPE 202 207
  2Q GAIN MUTATED 2Q GAIN WILD-TYPE 
              138               409 
  2Q GAIN MUTATED 2Q GAIN WILD-TYPE 
               79               207 
$`2Q GAIN MUTATED`
TCGA-04-1347 TCGA-04-1350 TCGA-04-1356 TCGA-04-1364 TCGA-04-1516 TCGA-04-1536 
       63.06        63.98        49.28        33.67        41.59        29.06 
TCGA-04-1542 TCGA-04-1646 TCGA-04-1649 TCGA-04-1655 TCGA-09-0365 TCGA-09-0366 
       84.20        27.88        64.64        45.34         9.47        57.73 
TCGA-09-1661 TCGA-09-1672 TCGA-09-1674 TCGA-09-2043 TCGA-09-2048 TCGA-10-0927 
       38.43         5.85         8.55         6.15         4.50        81.47 
TCGA-10-0930 TCGA-10-0933 TCGA-10-0935 TCGA-10-0938 TCGA-13-0724 TCGA-13-0730 
       33.24        11.70        35.41        19.86         2.73        17.79 
TCGA-13-0757 TCGA-13-0760 TCGA-13-0800 TCGA-13-0883 TCGA-13-0884 TCGA-13-0888 
       11.18        11.54         8.12        68.91       107.18        70.39 
TCGA-13-0893 TCGA-13-0901 TCGA-13-0906 TCGA-13-0920 TCGA-13-1407 TCGA-13-1409 
       43.36        19.36        44.94        13.81         6.05         6.84 
TCGA-13-1410 TCGA-13-1412 TCGA-13-1488 TCGA-13-1496 TCGA-13-1501 TCGA-13-1504 
        4.70         5.33        70.82         4.24        32.84        16.57 
TCGA-13-1505 TCGA-13-2057 TCGA-13-2060 TCGA-20-1687 TCGA-23-1021 TCGA-23-1024 
        4.21        14.24         8.58         2.66        47.54        15.39 
TCGA-23-1111 TCGA-23-1114 TCGA-23-1119 TCGA-23-1121 TCGA-23-1122 TCGA-23-1809 
        3.22        68.68       129.96         6.38        39.09         0.53 
TCGA-23-2072 TCGA-23-2643 TCGA-24-1422 TCGA-24-1424 TCGA-24-1430 TCGA-24-1436 
       24.95         4.70         0.76         6.02        28.34         8.55 
TCGA-24-1467 TCGA-24-1469 TCGA-24-1474 TCGA-24-1544 TCGA-24-1553 TCGA-24-1558 
      105.99         9.11        22.19        26.96        58.09        19.53 
TCGA-24-1560 TCGA-24-1604 TCGA-24-1616 TCGA-24-1842 TCGA-24-1844 TCGA-24-1850 
       44.09        88.34        38.24         8.32         3.72         5.49 
TCGA-24-1924 TCGA-24-1928 TCGA-24-2033 TCGA-24-2261 TCGA-24-2288 TCGA-24-2289 
       30.21        11.05        18.48         0.79         0.82        67.36 
TCGA-24-2295 TCGA-25-1317 TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 TCGA-25-1329 
       33.11         1.02        65.00        36.95        33.96         2.96 
TCGA-25-1623 TCGA-25-1626 TCGA-25-1634 TCGA-25-1870 TCGA-25-1877 TCGA-25-1878 
       18.58        15.78        35.54        14.93        18.05        85.05 
TCGA-29-1691 TCGA-29-1695 TCGA-29-1696 TCGA-29-1698 TCGA-29-1763 TCGA-29-1764 
       47.18         0.79        33.70        68.28        66.77        62.93 
TCGA-29-1769 TCGA-29-1775 TCGA-29-2425 TCGA-29-2429 TCGA-30-1714 TCGA-30-1718 
       22.98        12.36        65.00         4.87        38.07        51.91 
TCGA-30-1859 TCGA-30-1862 TCGA-31-1950 TCGA-31-1959 TCGA-36-1576 TCGA-36-1578 
       48.07         6.08        18.77         2.17        30.05        27.85 
TCGA-36-1581 TCGA-36-2547 TCGA-36-2552 TCGA-42-2587 TCGA-57-1582 TCGA-57-1583 
       24.69        20.52        11.47        23.74        24.03        11.38 
TCGA-57-1585 TCGA-57-1586 TCGA-57-1994 TCGA-59-2348 TCGA-59-2352 TCGA-61-1730 
        1.74        22.32        25.02       180.16         9.40         4.34 
TCGA-61-1741 TCGA-61-1743 TCGA-61-1899 TCGA-61-1904 TCGA-61-1914 TCGA-61-1919 
       33.67        43.69         8.42         9.07        56.58        38.17 
TCGA-61-2003 TCGA-61-2012 TCGA-61-2018 TCGA-61-2088 TCGA-61-2097 TCGA-61-2098 
        3.98        30.64        45.40         4.77        60.62        65.49 
TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2113 TCGA-61-2612 TCGA-61-2614 
       55.50         6.48        76.83        22.22         6.35         8.58 

$`2Q GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1348 TCGA-04-1349 TCGA-04-1351 
       18.51        11.87        65.49        48.76        21.57        65.46 
TCGA-04-1361 TCGA-04-1362 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 
       32.52        44.32        76.54        71.47        82.36        56.55 
TCGA-04-1517 TCGA-04-1525 TCGA-04-1530 TCGA-04-1638 TCGA-04-1644 TCGA-04-1648 
       19.99        38.37       119.08        55.40        48.89        28.64 
TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 TCGA-09-0364 TCGA-09-0367 TCGA-09-0369 
       36.23        31.86        47.70        29.16        17.95        35.54 
TCGA-09-1659 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 
        9.96        89.33        74.89        41.59        57.57        61.87 
TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 TCGA-09-1673 TCGA-09-1675 TCGA-09-2044 
       55.36        30.48        17.98         3.02        97.55         6.12 
TCGA-09-2045 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 
       35.15       112.37        71.11        63.09        39.75        20.91 
TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0928 TCGA-10-0931 
       26.93        12.46        54.31        25.91        18.48        32.28 
TCGA-10-0934 TCGA-10-0936 TCGA-10-0937 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 
        3.88        35.80        15.12         6.21        24.59        44.55 
TCGA-13-0723 TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0751 TCGA-13-0755 
       39.58        12.39        31.07        15.19        55.17         2.47 
TCGA-13-0758 TCGA-13-0761 TCGA-13-0762 TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 
       11.38        34.06        32.25        31.04        21.40         8.42 
TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 
       38.93        36.72        28.70        30.35        19.56         8.71 
TCGA-13-0799 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 
        7.79         8.28         8.19        43.82        35.28        35.28 
TCGA-13-0807 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0889 TCGA-13-0890 
       13.61        91.40        74.27        66.64        61.81        67.99 
TCGA-13-0891 TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 TCGA-13-0903 TCGA-13-0904 
       69.01        57.47        56.15        57.07        47.38        48.33 
TCGA-13-0905 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 
       47.84        44.84        37.08        27.68        34.06        29.98 
TCGA-13-0916 TCGA-13-0919 TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 
       21.14        14.89         4.64         6.41         6.08        10.88 
TCGA-13-1404 TCGA-13-1405 TCGA-13-1408 TCGA-13-1411 TCGA-13-1477 TCGA-13-1481 
        6.61         7.36         5.92         4.21        54.61        87.06 
TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 TCGA-13-1489 
       61.71        29.39        98.04        20.68        22.39        82.88 
TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1497 TCGA-13-1498 
       52.44        73.55        38.17        49.22        54.31        37.61 
TCGA-13-1499 TCGA-13-1500 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 
       38.37        13.97         4.41         4.77         4.14         2.56 
TCGA-13-1511 TCGA-13-1512 TCGA-13-2059 TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 
        3.88         3.09        12.23        10.78         8.75         6.28 
TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 TCGA-20-1683 
       23.05        25.94        26.20        72.20        27.48        25.38 
TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-23-1022 TCGA-23-1023 TCGA-23-1026 
       19.07        16.67         2.93        42.51        40.54        26.83 
TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 
       31.73        49.41         8.81        29.10        18.87         2.24 
TCGA-23-1109 TCGA-23-1110 TCGA-23-1113 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 
       51.35        54.51        31.20         4.57        33.30        86.01 
TCGA-23-1120 TCGA-23-1123 TCGA-23-1124 TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 
        4.27        33.47        58.13       115.89        87.48        91.66 
TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 
       77.00        49.84         2.76         4.50         7.63        19.63 
TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 
       11.64        21.80        41.56         7.66        22.32        54.08 
TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 
       63.55        47.41         6.31         6.38         7.82         7.99 
TCGA-24-1419 TCGA-24-1423 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 
        7.86         6.25         5.95         5.36         4.80        17.36 
TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 
       19.17        18.67        43.53        72.92        12.46        45.14 
TCGA-24-1470 TCGA-24-1471 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 
        3.42         1.18        57.37        64.27        16.21        56.58 
TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 
       41.06        51.91        41.39        88.50        70.62        39.88 
TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 
       45.50        47.70        25.87        10.26        17.23        90.15 
TCGA-24-1614 TCGA-24-1843 TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 
       48.33         3.48         3.81         4.37        11.28         5.75 
TCGA-24-1920 TCGA-24-1923 TCGA-24-1927 TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 
        9.80        22.65        16.41        81.11         4.87       151.99 
TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 
       44.84        58.16        34.82       109.68        14.43        53.95 
TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 TCGA-24-2262 
       28.18        64.01        44.48        57.07        36.16         0.36 
TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2290 TCGA-24-2293 
       47.54        31.63        70.45        44.58        36.23        16.64 
TCGA-24-2297 TCGA-24-2298 TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 
       55.86        53.26         1.02        26.93        31.99        51.06 
TCGA-25-1316 TCGA-25-1318 TCGA-25-1322 TCGA-25-1323 TCGA-25-1625 TCGA-25-1627 
       37.02        34.98         2.99        12.00        18.02         0.36 
TCGA-25-1628 TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1635 
       20.58         7.86         0.30        56.94        60.59        51.22 
TCGA-25-1871 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 TCGA-25-2396 
       24.99        13.02        49.05         1.02        38.04         3.02 
TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 
       12.00        45.01        19.99        42.02         2.96        29.00 
TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1693 TCGA-29-1694 
       30.97        26.96        78.87        44.71       101.75        38.53 
TCGA-29-1697 TCGA-29-1699 TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 
       31.17         0.53        16.90        18.64        59.67        18.25 
TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 TCGA-29-1766 
       41.95        29.23        34.62        17.00        85.68        39.09 
TCGA-29-1768 TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 TCGA-29-1776 TCGA-29-1777 
       31.23        24.36        22.52        17.29        11.84        12.30 
TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 
       14.93         8.35         7.20         5.36        34.62        86.17 
TCGA-29-2427 TCGA-29-2428 TCGA-29-2431 TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 
       62.47        45.11        42.25        11.84        11.47         9.76 
TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1860 TCGA-30-1861 
       36.26         2.47        15.68         0.26        44.91        34.78 
TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 
       36.62         1.18        57.57        24.26        30.05        48.79 
TCGA-31-1944 TCGA-31-1946 TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 
       45.57        30.18        22.45         6.71        42.51        44.09 
TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 
       28.73        29.06        21.53        22.85        22.55         8.55 
TCGA-36-1577 TCGA-36-1580 TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 
       25.74        24.23        35.05        33.01        29.49        29.79 
TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 
       25.91        25.08        23.80        21.60         2.24        20.98 
TCGA-36-2545 TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 TCGA-42-2582 TCGA-42-2588 
       18.31        14.17         6.05        16.14        26.04         9.44 
TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1584 TCGA-57-1992 
        7.56         7.46        22.39         1.48        21.14        28.96 
TCGA-57-1993 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2354 TCGA-59-2355 
       25.05        80.12        22.32       116.12        34.39         2.14 
TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 
        5.39        44.78        11.11         8.05        20.94        31.40 
TCGA-61-1727 TCGA-61-1728 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 
       18.54        27.88        31.76        28.47        48.79        44.84 
TCGA-61-1738 TCGA-61-1740 TCGA-61-1895 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 
       35.80         2.43         1.41         5.79        11.41        13.02 
TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1915 
       34.13        31.30        37.02        42.48        48.92        67.73 
TCGA-61-1917 TCGA-61-1918 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 
       43.43        15.75         1.97         5.52        14.50        17.98 
TCGA-61-2008 TCGA-61-2009 TCGA-61-2016 TCGA-61-2017 TCGA-61-2087 TCGA-61-2092 
       30.61        39.85         1.18        45.96         4.80        51.72 
TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 
       71.74        61.64        58.39        20.68        44.52       125.72 
TCGA-61-2613 
       31.07 

  2Q GAIN MUTATED 2Q GAIN WILD-TYPE 
             0.53              0.26 
  2Q GAIN MUTATED 2Q GAIN WILD-TYPE 
           180.16            151.99 
  2Q GAIN MUTATED 2Q GAIN WILD-TYPE 
            22.65             29.16 
[1] "0.5 - 180.2 (22.6)" "0.3 - 152.0 (29.2)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
  "2Q GAIN MUTATED"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "2Q GAIN MUTATED"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
  "2Q GAIN MUTATED"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "2Q GAIN MUTATED"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
  "2Q GAIN MUTATED"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "2Q GAIN MUTATED"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "2Q GAIN MUTATED"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED"   "2Q GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "2Q GAIN MUTATED" "2Q GAIN WILD-TYPE"   "2Q GAIN MUTATED" 
[1] "hr=" "1.2"
D4V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  2Q GAIN MUTATED         0   138                0
  2Q GAIN WILD-TYPE       2   410                2
D4V3, multiclass
                  clus
vv                 2Q GAIN MUTATED 2Q GAIN WILD-TYPE
  OMENTUM                        0                 2
  OVARY                        138               410
  PERITONEUM OVARY               0                 2
D4V4, continuous
D4V5, binary
                   cls
clus                  0   1
  2Q GAIN MUTATED     2 140
  2Q GAIN WILD-TYPE   1 419
[1] "tbl2"
                   cls
clus                [,1] [,2]
  2Q GAIN MUTATED      2  140
  2Q GAIN WILD-TYPE    1  419
     clus
vv    2Q GAIN MUTATED 2Q GAIN WILD-TYPE
  NO                2                 1
  YES             140               419
                   vv
clus                R0 R1 R2
  2Q GAIN MUTATED    3  6  0
  2Q GAIN WILD-TYPE 11 20  2
D4V6, multiclass
    clus
vv   2Q GAIN MUTATED 2Q GAIN WILD-TYPE
  R0               3                11
  R1               6                20
  R2               0                 2

Clustering(5) Variable = 3P GAIN MUTATION ANALYSIS
D5V1, survival
                   sevent
clus2                 0   1
  3P GAIN MUTATED    72  78
  3P GAIN WILD-TYPE 189 208
  3P GAIN MUTATED 3P GAIN WILD-TYPE 
              150               397 
  3P GAIN MUTATED 3P GAIN WILD-TYPE 
               78               208 
$`3P GAIN MUTATED`
TCGA-04-1332 TCGA-04-1337 TCGA-04-1338 TCGA-04-1343 TCGA-04-1349 TCGA-04-1362 
       41.00         2.01        46.62        11.87        21.57        44.32 
TCGA-04-1371 TCGA-04-1516 TCGA-04-1517 TCGA-04-1536 TCGA-04-1646 TCGA-04-1655 
       82.36        41.59        19.99        29.06        27.88        45.34 
TCGA-09-0364 TCGA-09-0367 TCGA-09-1659 TCGA-09-1665 TCGA-09-1668 TCGA-09-1670 
       29.16        17.95         9.96        41.59        55.36        17.98 
TCGA-09-1672 TCGA-09-1674 TCGA-09-2043 TCGA-10-0930 TCGA-10-0935 TCGA-10-0936 
        5.85         8.55         6.15        33.24        35.41        35.80 
TCGA-13-0723 TCGA-13-0724 TCGA-13-0751 TCGA-13-0760 TCGA-13-0762 TCGA-13-0795 
       39.58         2.73        55.17        11.54        32.25        19.56 
TCGA-13-0800 TCGA-13-0884 TCGA-13-0911 TCGA-13-0921 TCGA-13-1403 TCGA-13-1410 
        8.12       107.18        27.68         4.64        10.88         4.70 
TCGA-13-1484 TCGA-13-1489 TCGA-13-1495 TCGA-13-1497 TCGA-13-1504 TCGA-13-1505 
       98.04        82.88        49.22        54.31        16.57         4.21 
TCGA-13-1507 TCGA-13-2060 TCGA-13-2061 TCGA-20-0991 TCGA-20-1683 TCGA-20-1686 
        4.77         8.58        10.78        26.20        25.38         2.93 
TCGA-20-1687 TCGA-23-1026 TCGA-23-1109 TCGA-23-1110 TCGA-23-1116 TCGA-23-1117 
        2.66        26.83        51.35        54.51         4.57        33.30 
TCGA-23-1119 TCGA-23-2072 TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 TCGA-23-2643 
      129.96        24.95       115.89        87.48        91.66         4.70 
TCGA-24-0979 TCGA-24-0982 TCGA-24-1413 TCGA-24-1424 TCGA-24-1426 TCGA-24-1428 
       41.56        22.32         6.31         6.02         5.36        17.36 
TCGA-24-1434 TCGA-24-1436 TCGA-24-1467 TCGA-24-1470 TCGA-24-1474 TCGA-24-1553 
       18.67         8.55       105.99         3.42        22.19        58.09 
TCGA-24-1557 TCGA-24-1558 TCGA-24-1564 TCGA-24-1567 TCGA-24-1614 TCGA-24-1842 
       39.88        19.53        25.87        17.23        48.33         8.32 
TCGA-24-1844 TCGA-24-1847 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 
        3.72        11.28         5.49         9.80        22.65        30.21 
TCGA-24-1927 TCGA-24-1928 TCGA-24-2019 TCGA-24-2020 TCGA-24-2038 TCGA-24-2261 
       16.41        11.05         4.87       151.99        44.48         0.79 
TCGA-24-2267 TCGA-24-2295 TCGA-25-1318 TCGA-25-1319 TCGA-25-1321 TCGA-25-1329 
       47.54        33.11        34.98        65.00        33.96         2.96 
TCGA-25-1623 TCGA-25-1626 TCGA-25-1634 TCGA-25-1635 TCGA-25-1877 TCGA-25-1878 
       18.58        15.78        35.54        51.22        18.05        85.05 
TCGA-25-2398 TCGA-25-2400 TCGA-25-2404 TCGA-29-1698 TCGA-29-1701 TCGA-29-1705 
       45.01        42.02        29.00        68.28        16.90        18.25 
TCGA-29-1710 TCGA-29-1761 TCGA-29-1770 TCGA-29-1778 TCGA-29-1783 TCGA-29-2414 
       29.23        17.00        24.36        14.93         7.20        86.17 
TCGA-29-2425 TCGA-29-2428 TCGA-29-2431 TCGA-30-1718 TCGA-30-1859 TCGA-30-1861 
       65.00        45.11        42.25        51.91        48.07        34.78 
TCGA-30-1866 TCGA-30-1867 TCGA-30-1892 TCGA-31-1950 TCGA-36-1574 TCGA-36-1578 
       36.62         1.18        48.79        18.77        22.55        27.85 
TCGA-36-2529 TCGA-36-2543 TCGA-42-2587 TCGA-42-2590 TCGA-57-1582 TCGA-57-1585 
       35.05         2.24        23.74         7.46        24.03         1.74 
TCGA-57-1994 TCGA-59-2351 TCGA-59-2352 TCGA-61-1899 TCGA-61-1901 TCGA-61-1903 
       25.02       116.12         9.40         8.42        11.41        13.02 
TCGA-61-1904 TCGA-61-1906 TCGA-61-1907 TCGA-61-1915 TCGA-61-2002 TCGA-61-2003 
        9.07        34.13        31.30        67.73        17.98         3.98 
TCGA-61-2008 TCGA-61-2009 TCGA-61-2097 TCGA-61-2111 TCGA-61-2612 TCGA-61-2614 
       30.61        39.85        60.62       125.72         6.35         8.58 

$`3P GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1335 TCGA-04-1336 TCGA-04-1342 TCGA-04-1346 TCGA-04-1347 
       40.24         1.81        49.15        18.51        65.49        63.06 
TCGA-04-1348 TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 TCGA-04-1364 
       48.76        63.98        65.46        49.28        32.52        33.67 
TCGA-04-1365 TCGA-04-1367 TCGA-04-1514 TCGA-04-1525 TCGA-04-1530 TCGA-04-1542 
       76.54        71.47        56.55        38.37       119.08        84.20 
TCGA-04-1638 TCGA-04-1644 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 
       55.40        48.89        28.64        64.64        36.23        31.86 
TCGA-04-1654 TCGA-09-0365 TCGA-09-0366 TCGA-09-0369 TCGA-09-1661 TCGA-09-1662 
       47.70         9.47        57.73        35.54        38.43        89.33 
TCGA-09-1664 TCGA-09-1666 TCGA-09-1667 TCGA-09-1669 TCGA-09-1673 TCGA-09-1675 
       74.89        57.57        61.87        30.48         3.02        97.55 
TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 
        6.12        35.15         4.50       112.37        71.11        63.09 
TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 
       39.75        20.91        26.93        12.46        54.31        25.91 
TCGA-10-0927 TCGA-10-0928 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0937 
       81.47        18.48        32.28        11.70         3.88        15.12 
TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0725 TCGA-13-0726 
       19.86         6.21        24.59        44.55        12.39        31.07 
TCGA-13-0727 TCGA-13-0730 TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 TCGA-13-0761 
       15.19        17.79         2.47        11.18        11.38        34.06 
TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 
       31.04        21.40         8.42        38.93        36.72        28.70 
TCGA-13-0794 TCGA-13-0797 TCGA-13-0799 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 
       30.35         8.71         7.79         8.28         8.19        43.82 
TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0885 TCGA-13-0886 
       35.28        35.28        13.61        68.91        91.40        74.27 
TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 
       66.64        70.39        61.81        67.99        69.01        43.36 
TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 
       57.47        56.15        57.07        19.36        47.38        48.33 
TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0912 TCGA-13-0913 
       47.84        44.94        44.84        37.08        34.06        29.98 
TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 TCGA-13-0923 TCGA-13-0924 TCGA-13-1404 
       21.14        14.89        13.81         6.41         6.08         6.61 
TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 TCGA-13-1411 TCGA-13-1412 
        7.36         6.05         5.92         6.84         4.21         5.33 
TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1485 TCGA-13-1487 
       54.61        87.06        61.71        29.39        20.68        22.39 
TCGA-13-1488 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1496 TCGA-13-1498 
       70.82        52.44        73.55        38.17         4.24        37.61 
TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1506 TCGA-13-1509 TCGA-13-1510 
       38.37        13.97        32.84         4.41         4.14         2.56 
TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 TCGA-13-2059 TCGA-13-2065 TCGA-13-2071 
        3.88         3.09        14.24        12.23         8.75         6.28 
TCGA-20-0987 TCGA-20-0990 TCGA-20-0996 TCGA-20-1682 TCGA-20-1684 TCGA-20-1685 
       23.05        25.94        72.20        27.48        19.07        16.67 
TCGA-23-1021 TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 TCGA-23-1027 TCGA-23-1028 
       47.54        42.51        40.54        15.39        31.73        49.41 
TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1111 TCGA-23-1113 
        8.81        29.10        18.87         2.24         3.22        31.20 
TCGA-23-1114 TCGA-23-1118 TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 
       68.68        86.01         4.27         6.38        39.09        33.47 
TCGA-23-1124 TCGA-23-1809 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2645 
       58.13         0.53        77.00        49.84         2.76         4.50 
TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-0980 TCGA-24-1103 
        7.63        19.63        11.64        21.80         7.66        54.08 
TCGA-24-1104 TCGA-24-1105 TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 
       63.55        47.41         6.38         7.82         7.99         7.86 
TCGA-24-1422 TCGA-24-1423 TCGA-24-1425 TCGA-24-1427 TCGA-24-1430 TCGA-24-1431 
        0.76         6.25         5.95         4.80        28.34        19.17 
TCGA-24-1435 TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 TCGA-24-1469 TCGA-24-1471 
       43.53        72.92        12.46        45.14         9.11         1.18 
TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 
       26.96        57.37        64.27        16.21        56.58        41.06 
TCGA-24-1551 TCGA-24-1552 TCGA-24-1555 TCGA-24-1556 TCGA-24-1560 TCGA-24-1562 
       51.91        41.39        88.50        70.62        44.09        45.50 
TCGA-24-1563 TCGA-24-1565 TCGA-24-1603 TCGA-24-1604 TCGA-24-1616 TCGA-24-1843 
       47.70        10.26        90.15        88.34        38.24         3.48 
TCGA-24-1845 TCGA-24-1846 TCGA-24-1849 TCGA-24-1930 TCGA-24-2023 TCGA-24-2024 
        3.81         4.37         5.75        81.11        44.84        58.16 
TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 
       34.82       109.68        14.43        53.95        18.48        28.18 
TCGA-24-2036 TCGA-24-2254 TCGA-24-2260 TCGA-24-2262 TCGA-24-2271 TCGA-24-2280 
       64.01        57.07        36.16         0.36        31.63        70.45 
TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2297 
       44.58         0.82        67.36        36.23        16.64        55.86 
TCGA-24-2298 TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 
       53.26         1.02        26.93        31.99        51.06        37.02 
TCGA-25-1317 TCGA-25-1320 TCGA-25-1322 TCGA-25-1323 TCGA-25-1625 TCGA-25-1627 
        1.02        36.95         2.99        12.00        18.02         0.36 
TCGA-25-1628 TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1870 
       20.58         7.86         0.30        56.94        60.59        14.93 
TCGA-25-1871 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 TCGA-25-2396 
       24.99        13.02        49.05         1.02        38.04         3.02 
TCGA-25-2397 TCGA-25-2399 TCGA-25-2401 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 
       12.00        19.99         2.96        30.97        26.96        78.87 
TCGA-29-1690 TCGA-29-1691 TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 
       44.71        47.18       101.75        38.53         0.79        33.70 
TCGA-29-1697 TCGA-29-1699 TCGA-29-1702 TCGA-29-1703 TCGA-29-1707 TCGA-29-1711 
       31.17         0.53        18.64        59.67        41.95        34.62 
TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 
       85.68        66.77        62.93        39.09        31.23        22.98 
TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 TCGA-29-1776 TCGA-29-1777 TCGA-29-1781 
       22.52        17.29        12.36        11.84        12.30         8.35 
TCGA-29-1784 TCGA-29-1785 TCGA-29-2427 TCGA-29-2429 TCGA-29-2432 TCGA-29-2434 
        5.36        34.62        62.47         4.87        11.84        11.47 
TCGA-29-2436 TCGA-30-1714 TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 
        9.76        38.07        36.26         2.47        15.68         0.26 
TCGA-30-1860 TCGA-30-1862 TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-31-1944 
       44.91         6.08        57.57        24.26        30.05        45.57 
TCGA-31-1946 TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 
       30.18        22.45         6.71        42.51        44.09         2.17 
TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 TCGA-36-1575 TCGA-36-1576 
       28.73        29.06        21.53        22.85         8.55        30.05 
TCGA-36-1577 TCGA-36-1580 TCGA-36-1581 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 
       25.74        24.23        24.69        33.01        29.49        29.79 
TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2544 TCGA-36-2545 
       25.91        25.08        23.80        21.60        20.98        18.31 
TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 TCGA-36-2552 TCGA-42-2582 
       20.52        14.17         6.05        16.14        11.47        26.04 
TCGA-42-2588 TCGA-42-2589 TCGA-42-2591 TCGA-42-2593 TCGA-57-1583 TCGA-57-1584 
        9.44         7.56        22.39         1.48        11.38        21.14 
TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 
       22.32        28.96        25.05       180.16        80.12        22.32 
TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 
       34.39         2.14         5.39        44.78        11.11         8.05 
TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 
       20.94        31.40        18.54        27.88         4.34        31.76 
TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 
       28.47        48.79        44.84        35.80         2.43        33.67 
TCGA-61-1743 TCGA-61-1895 TCGA-61-1900 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 
       43.69         1.41         5.79        37.02        42.48        48.92 
TCGA-61-1914 TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 
       56.58        43.43        15.75        38.17         1.97         5.52 
TCGA-61-2000 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 
       14.50        30.64         1.18        45.96        45.40         4.80 
TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2098 
        4.77        51.72        71.74        61.64        58.39        65.49 
TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 TCGA-61-2113 
       55.50         6.48        76.83        20.68        44.52        22.22 
TCGA-61-2613 
       31.07 

  3P GAIN MUTATED 3P GAIN WILD-TYPE 
             0.79              0.26 
  3P GAIN MUTATED 3P GAIN WILD-TYPE 
           151.99            180.16 
  3P GAIN MUTATED 3P GAIN WILD-TYPE 
           24.985            29.100 
[1] "0.8 - 152.0 (25.0)" "0.3 - 180.2 (29.1)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "3P GAIN MUTATED"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED"   "3P GAIN MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "3P GAIN MUTATED"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED"   "3P GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED"   "3P GAIN MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "3P GAIN MUTATED"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED"   "3P GAIN MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "3P GAIN MUTATED"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED"   "3P GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED"   "3P GAIN MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "3P GAIN MUTATED"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED"   "3P GAIN MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "3P GAIN MUTATED"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED"   "3P GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "3P GAIN MUTATED"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"3P GAIN WILD-TYPE"   "3P GAIN MUTATED"   "3P GAIN MUTATED"   "3P GAIN MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"3P GAIN WILD-TYPE" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" "3P GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "3P GAIN MUTATED" "3P GAIN WILD-TYPE"   "3P GAIN MUTATED" 
[1] "hr=" "1"  
D5V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  3P GAIN MUTATED         0   151                1
  3P GAIN WILD-TYPE       2   397                1
D5V3, multiclass
                  clus
vv                 3P GAIN MUTATED 3P GAIN WILD-TYPE
  OMENTUM                        0                 2
  OVARY                        151               397
  PERITONEUM OVARY               1                 1
D5V4, continuous
D5V5, binary
                   cls
clus                  0   1
  3P GAIN MUTATED     0 155
  3P GAIN WILD-TYPE   3 404
[1] "tbl2"
                   cls
clus                [,1] [,2]
  3P GAIN MUTATED      0  155
  3P GAIN WILD-TYPE    3  404
     clus
vv    3P GAIN MUTATED 3P GAIN WILD-TYPE
  NO                0                 3
  YES             155               404
                   vv
clus                R0 R1 R2
  3P GAIN MUTATED    2 10  0
  3P GAIN WILD-TYPE 12 16  2
D5V6, multiclass
    clus
vv   3P GAIN MUTATED 3P GAIN WILD-TYPE
  R0               2                12
  R1              10                16
  R2               0                 2

Clustering(6) Variable = 3Q GAIN MUTATION ANALYSIS
D6V1, survival
                   sevent
clus2                 0   1
  3Q GAIN MUTATED   124 133
  3Q GAIN WILD-TYPE 137 153
  3Q GAIN MUTATED 3Q GAIN WILD-TYPE 
              257               290 
  3Q GAIN MUTATED 3Q GAIN WILD-TYPE 
              133               153 
$`3Q GAIN MUTATED`
TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 TCGA-04-1343 
       41.00         1.81        49.15         2.01        46.62        11.87 
TCGA-04-1346 TCGA-04-1347 TCGA-04-1349 TCGA-04-1350 TCGA-04-1361 TCGA-04-1362 
       65.49        63.06        21.57        63.98        32.52        44.32 
TCGA-04-1364 TCGA-04-1365 TCGA-04-1371 TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 
       33.67        76.54        82.36        41.59        19.99        38.37 
TCGA-04-1530 TCGA-04-1536 TCGA-04-1542 TCGA-04-1646 TCGA-04-1655 TCGA-09-0364 
      119.08        29.06        84.20        27.88        45.34        29.16 
TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-1659 TCGA-09-1665 TCGA-09-1668 
        9.47        57.73        17.95         9.96        41.59        55.36 
TCGA-09-1669 TCGA-09-1670 TCGA-09-1672 TCGA-09-1674 TCGA-09-2043 TCGA-09-2044 
       30.48        17.98         5.85         8.55         6.15         6.12 
TCGA-09-2048 TCGA-09-2049 TCGA-09-2053 TCGA-10-0930 TCGA-10-0933 TCGA-10-0935 
        4.50       112.37        39.75        33.24        11.70        35.41 
TCGA-10-0936 TCGA-13-0723 TCGA-13-0724 TCGA-13-0727 TCGA-13-0751 TCGA-13-0757 
       35.80        39.58         2.73        15.19        55.17        11.18 
TCGA-13-0760 TCGA-13-0768 TCGA-13-0795 TCGA-13-0800 TCGA-13-0802 TCGA-13-0804 
       11.54         8.42        19.56         8.12         8.19        35.28 
TCGA-13-0884 TCGA-13-0888 TCGA-13-0897 TCGA-13-0901 TCGA-13-0911 TCGA-13-0920 
      107.18        70.39        57.47        19.36        27.68        13.81 
TCGA-13-0921 TCGA-13-1403 TCGA-13-1409 TCGA-13-1410 TCGA-13-1411 TCGA-13-1481 
        4.64        10.88         6.84         4.70         4.21        87.06 
TCGA-13-1484 TCGA-13-1487 TCGA-13-1489 TCGA-13-1495 TCGA-13-1496 TCGA-13-1497 
       98.04        22.39        82.88        49.22         4.24        54.31 
TCGA-13-1499 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-2057 
       38.37        16.57         4.21         4.41         4.77        14.24 
TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 TCGA-20-0990 TCGA-20-0991 TCGA-20-1683 
        8.58        10.78         8.75        25.94        26.20        25.38 
TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 TCGA-23-1026 TCGA-23-1029 TCGA-23-1031 
        2.93         2.66        47.54        26.83         8.81        18.87 
TCGA-23-1109 TCGA-23-1110 TCGA-23-1114 TCGA-23-1116 TCGA-23-1117 TCGA-23-1119 
       51.35        54.51        68.68         4.57        33.30       129.96 
TCGA-23-1122 TCGA-23-1123 TCGA-23-1809 TCGA-23-2072 TCGA-23-2077 TCGA-23-2078 
       39.09        33.47         0.53        24.95       115.89        87.48 
TCGA-23-2079 TCGA-23-2084 TCGA-23-2643 TCGA-24-0968 TCGA-24-0970 TCGA-24-0979 
       91.66        49.84         4.70        19.63        11.64        41.56 
TCGA-24-0982 TCGA-24-1413 TCGA-24-1417 TCGA-24-1424 TCGA-24-1426 TCGA-24-1427 
       22.32         6.31         7.82         6.02         5.36         4.80 
TCGA-24-1428 TCGA-24-1434 TCGA-24-1436 TCGA-24-1467 TCGA-24-1470 TCGA-24-1474 
       17.36        18.67         8.55       105.99         3.42        22.19 
TCGA-24-1548 TCGA-24-1553 TCGA-24-1557 TCGA-24-1558 TCGA-24-1564 TCGA-24-1567 
       16.21        58.09        39.88        19.53        25.87        17.23 
TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 
       88.34        48.33        38.24         8.32         3.48         3.72 
TCGA-24-1847 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 
       11.28         5.49         9.80        22.65        30.21        16.41 
TCGA-24-1928 TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 TCGA-24-2026 TCGA-24-2033 
       11.05        81.11         4.87       151.99        34.82        18.48 
TCGA-24-2038 TCGA-24-2260 TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2280 
       44.48        36.16         0.79         0.36        47.54        70.45 
TCGA-24-2295 TCGA-25-1312 TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 TCGA-25-1321 
       33.11         1.02         1.02        34.98        65.00        33.96 
TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 
       12.00         2.96        18.58        18.02        15.78         0.36 
TCGA-25-1630 TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 
        7.86        35.54        51.22        14.93        24.99        18.05 
TCGA-25-1878 TCGA-25-2396 TCGA-25-2398 TCGA-25-2400 TCGA-25-2404 TCGA-29-1693 
       85.05         3.02        45.01        42.02        29.00       101.75 
TCGA-29-1698 TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1710 
       68.28        16.90        18.64        59.67        18.25        29.23 
TCGA-29-1761 TCGA-29-1764 TCGA-29-1766 TCGA-29-1770 TCGA-29-1775 TCGA-29-1776 
       17.00        62.93        39.09        24.36        12.36        11.84 
TCGA-29-1778 TCGA-29-1783 TCGA-29-2414 TCGA-29-2425 TCGA-29-2428 TCGA-29-2431 
       14.93         7.20        86.17        65.00        45.11        42.25 
TCGA-29-2432 TCGA-29-2434 TCGA-30-1718 TCGA-30-1857 TCGA-30-1859 TCGA-30-1861 
       11.84        11.47        51.91         0.26        48.07        34.78 
TCGA-30-1866 TCGA-30-1867 TCGA-30-1887 TCGA-30-1892 TCGA-31-1950 TCGA-31-1956 
       36.62         1.18        24.26        48.79        18.77        44.09 
TCGA-36-1569 TCGA-36-1574 TCGA-36-1576 TCGA-36-1578 TCGA-36-1580 TCGA-36-1581 
       29.06        22.55        30.05        27.85        24.23        24.69 
TCGA-36-2529 TCGA-36-2530 TCGA-36-2534 TCGA-36-2543 TCGA-36-2545 TCGA-36-2547 
       35.05        33.01        29.79         2.24        18.31        20.52 
TCGA-36-2548 TCGA-36-2551 TCGA-36-2552 TCGA-42-2587 TCGA-42-2590 TCGA-42-2593 
       14.17        16.14        11.47        23.74         7.46         1.48 
TCGA-57-1582 TCGA-57-1585 TCGA-57-1586 TCGA-57-1993 TCGA-57-1994 TCGA-59-2350 
       24.03         1.74        22.32        25.05        25.02        22.32 
TCGA-59-2351 TCGA-59-2352 TCGA-61-1722 TCGA-61-1727 TCGA-61-1728 TCGA-61-1733 
      116.12         9.40         8.05        18.54        27.88        31.76 
TCGA-61-1899 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 TCGA-61-1907 
        8.42        11.41        13.02         9.07        34.13        31.30 
TCGA-61-1914 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 TCGA-61-2002 
       56.58        67.73        43.43        15.75        38.17        17.98 
TCGA-61-2003 TCGA-61-2008 TCGA-61-2009 TCGA-61-2097 TCGA-61-2098 TCGA-61-2102 
        3.98        30.61        39.85        60.62        65.49         6.48 
TCGA-61-2104 TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 TCGA-61-2614 
       76.83       125.72        22.22         6.35         8.58 

$`3Q GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1342 TCGA-04-1348 TCGA-04-1351 TCGA-04-1356 TCGA-04-1367 
       40.24        18.51        48.76        65.46        49.28        71.47 
TCGA-04-1514 TCGA-04-1638 TCGA-04-1644 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 
       56.55        55.40        48.89        28.64        64.64        36.23 
TCGA-04-1652 TCGA-04-1654 TCGA-09-0369 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 
       31.86        47.70        35.54        38.43        89.33        74.89 
TCGA-09-1666 TCGA-09-1667 TCGA-09-1673 TCGA-09-1675 TCGA-09-2045 TCGA-09-2050 
       57.57        61.87         3.02        97.55        35.15        71.11 
TCGA-09-2051 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 
       63.09        20.91        26.93        12.46        54.31        25.91 
TCGA-10-0927 TCGA-10-0928 TCGA-10-0931 TCGA-10-0934 TCGA-10-0937 TCGA-10-0938 
       81.47        18.48        32.28         3.88        15.12        19.86 
TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0725 TCGA-13-0726 TCGA-13-0730 
        6.21        24.59        44.55        12.39        31.07        17.79 
TCGA-13-0755 TCGA-13-0758 TCGA-13-0761 TCGA-13-0762 TCGA-13-0764 TCGA-13-0766 
        2.47        11.38        34.06        32.25        31.04        21.40 
TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0797 TCGA-13-0799 
       38.93        36.72        28.70        30.35         8.71         7.79 
TCGA-13-0801 TCGA-13-0803 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0885 
        8.28        43.82        35.28        13.61        68.91        91.40 
TCGA-13-0886 TCGA-13-0887 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 
       74.27        66.64        61.81        67.99        69.01        43.36 
TCGA-13-0899 TCGA-13-0900 TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 
       56.15        57.07        47.38        48.33        47.84        44.94 
TCGA-13-0908 TCGA-13-0910 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 
       44.84        37.08        34.06        29.98        21.14        14.89 
TCGA-13-0923 TCGA-13-0924 TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 
        6.41         6.08         6.61         7.36         6.05         5.92 
TCGA-13-1412 TCGA-13-1477 TCGA-13-1482 TCGA-13-1483 TCGA-13-1485 TCGA-13-1488 
        5.33        54.61        61.71        29.39        20.68        70.82 
TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1498 TCGA-13-1500 TCGA-13-1501 
       52.44        73.55        38.17        37.61        13.97        32.84 
TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2059 TCGA-13-2071 
        4.14         2.56         3.88         3.09        12.23         6.28 
TCGA-20-0987 TCGA-20-0996 TCGA-20-1682 TCGA-20-1684 TCGA-20-1685 TCGA-23-1022 
       23.05        72.20        27.48        19.07        16.67        42.51 
TCGA-23-1023 TCGA-23-1024 TCGA-23-1027 TCGA-23-1028 TCGA-23-1030 TCGA-23-1032 
       40.54        15.39        31.73        49.41        29.10         2.24 
TCGA-23-1111 TCGA-23-1113 TCGA-23-1118 TCGA-23-1120 TCGA-23-1121 TCGA-23-1124 
        3.22        31.20        86.01         4.27         6.38        58.13 
TCGA-23-2081 TCGA-23-2641 TCGA-23-2645 TCGA-24-0966 TCGA-24-0975 TCGA-24-0980 
       77.00         2.76         4.50         7.63        21.80         7.66 
TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 TCGA-24-1416 TCGA-24-1418 TCGA-24-1419 
       54.08        63.55        47.41         6.38         7.99         7.86 
TCGA-24-1422 TCGA-24-1423 TCGA-24-1425 TCGA-24-1430 TCGA-24-1431 TCGA-24-1435 
        0.76         6.25         5.95        28.34        19.17        43.53 
TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 TCGA-24-1469 TCGA-24-1471 TCGA-24-1544 
       72.92        12.46        45.14         9.11         1.18        26.96 
TCGA-24-1545 TCGA-24-1546 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 
       57.37        64.27        56.58        41.06        51.91        41.39 
TCGA-24-1555 TCGA-24-1556 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1565 
       88.50        70.62        44.09        45.50        47.70        10.26 
TCGA-24-1603 TCGA-24-1845 TCGA-24-1846 TCGA-24-1849 TCGA-24-2023 TCGA-24-2024 
       90.15         3.81         4.37         5.75        44.84        58.16 
TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 TCGA-24-2035 TCGA-24-2036 TCGA-24-2254 
      109.68        14.43        53.95        28.18        64.01        57.07 
TCGA-24-2271 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 
       31.63        44.58         0.82        67.36        36.23        16.64 
TCGA-24-2297 TCGA-24-2298 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 
       55.86        53.26        26.93        31.99        51.06        37.02 
TCGA-25-1320 TCGA-25-1322 TCGA-25-1628 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 
       36.95         2.99        20.58         0.30        56.94        60.59 
TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 TCGA-25-2397 TCGA-25-2399 
       13.02        49.05         1.02        38.04        12.00        19.99 
TCGA-25-2401 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 
        2.96        30.97        26.96        78.87        44.71        47.18 
TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1699 TCGA-29-1707 
       38.53         0.79        33.70        31.17         0.53        41.95 
TCGA-29-1711 TCGA-29-1762 TCGA-29-1763 TCGA-29-1768 TCGA-29-1769 TCGA-29-1771 
       34.62        85.68        66.77        31.23        22.98        22.52 
TCGA-29-1774 TCGA-29-1777 TCGA-29-1781 TCGA-29-1784 TCGA-29-1785 TCGA-29-2427 
       17.29        12.30         8.35         5.36        34.62        62.47 
TCGA-29-2429 TCGA-29-2436 TCGA-30-1714 TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 
        4.87         9.76        38.07        36.26         2.47        15.68 
TCGA-30-1860 TCGA-30-1862 TCGA-30-1880 TCGA-30-1891 TCGA-31-1944 TCGA-31-1946 
       44.91         6.08        57.57        30.05        45.57        30.18 
TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 TCGA-31-1959 TCGA-36-1568 TCGA-36-1570 
       22.45         6.71        42.51         2.17        28.73        21.53 
TCGA-36-1571 TCGA-36-1575 TCGA-36-1577 TCGA-36-2532 TCGA-36-2537 TCGA-36-2538 
       22.85         8.55        25.74        29.49        25.91        25.08 
TCGA-36-2540 TCGA-36-2542 TCGA-36-2544 TCGA-36-2549 TCGA-42-2582 TCGA-42-2588 
       23.80        21.60        20.98         6.05        26.04         9.44 
TCGA-42-2589 TCGA-42-2591 TCGA-57-1583 TCGA-57-1584 TCGA-57-1992 TCGA-59-2348 
        7.56        22.39        11.38        21.14        28.96       180.16 
TCGA-59-2349 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 
       80.12        34.39         2.14         5.39        44.78        11.11 
TCGA-61-1724 TCGA-61-1725 TCGA-61-1730 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 
       20.94        31.40         4.34        28.47        48.79        44.84 
TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 TCGA-61-1900 
       35.80         2.43        33.67        43.69         1.41         5.79 
TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 
       37.02        42.48        48.92         1.97         5.52        14.50 
TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 
       30.64         1.18        45.96        45.40         4.80         4.77 
TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2101 TCGA-61-2109 
       51.72        71.74        61.64        58.39        55.50        20.68 
TCGA-61-2110 TCGA-61-2613 
       44.52        31.07 

  3Q GAIN MUTATED 3Q GAIN WILD-TYPE 
             0.26              0.30 
  3Q GAIN MUTATED 3Q GAIN WILD-TYPE 
           151.99            180.16 
  3Q GAIN MUTATED 3Q GAIN WILD-TYPE 
            24.03             31.07 
[1] "0.3 - 152.0 (24.0)" "0.3 - 180.2 (31.1)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "3Q GAIN MUTATED"   "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"3Q GAIN WILD-TYPE" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED"   "3Q GAIN MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "3Q GAIN MUTATED" "3Q GAIN WILD-TYPE"   "3Q GAIN MUTATED" 
[1] "hr=" "1.1"
D6V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  3Q GAIN MUTATED         0   258                2
  3Q GAIN WILD-TYPE       2   290                0
D6V3, multiclass
                  clus
vv                 3Q GAIN MUTATED 3Q GAIN WILD-TYPE
  OMENTUM                        0                 2
  OVARY                        258               290
  PERITONEUM OVARY               2                 0
D6V4, continuous
D6V5, binary
                   cls
clus                  0   1
  3Q GAIN MUTATED     0 264
  3Q GAIN WILD-TYPE   3 295
[1] "tbl2"
                   cls
clus                [,1] [,2]
  3Q GAIN MUTATED      0  264
  3Q GAIN WILD-TYPE    3  295
     clus
vv    3Q GAIN MUTATED 3Q GAIN WILD-TYPE
  NO                0                 3
  YES             264               295
                   vv
clus                R0 R1 R2
  3Q GAIN MUTATED    7 16  1
  3Q GAIN WILD-TYPE  7 10  1
D6V6, multiclass
    clus
vv   3Q GAIN MUTATED 3Q GAIN WILD-TYPE
  R0               7                 7
  R1              16                10
  R2               1                 1

Clustering(7) Variable = 4P GAIN MUTATION ANALYSIS
D7V1, survival
                   sevent
clus2                 0   1
  4P GAIN MUTATED    19  31
  4P GAIN WILD-TYPE 242 255
  4P GAIN MUTATED 4P GAIN WILD-TYPE 
               50               497 
  4P GAIN MUTATED 4P GAIN WILD-TYPE 
               31               255 
$`4P GAIN MUTATED`
TCGA-04-1349 TCGA-04-1356 TCGA-04-1364 TCGA-04-1525 TCGA-04-1530 TCGA-04-1646 
       21.57        49.28        33.67        38.37       119.08        27.88 
TCGA-09-1668 TCGA-09-2048 TCGA-10-0926 TCGA-13-0714 TCGA-13-0724 TCGA-13-0794 
       55.36         4.50        25.91         6.21         2.73        30.35 
TCGA-13-0802 TCGA-13-0883 TCGA-13-0920 TCGA-13-1483 TCGA-13-1499 TCGA-13-1505 
        8.19        68.91        13.81        29.39        38.37         4.21 
TCGA-13-2060 TCGA-23-1026 TCGA-23-1110 TCGA-23-1114 TCGA-23-2645 TCGA-24-1427 
        8.58        26.83        54.51        68.68         4.50         4.80 
TCGA-24-1428 TCGA-24-1464 TCGA-24-1545 TCGA-24-1558 TCGA-24-1843 TCGA-24-1928 
       17.36        12.46        57.37        19.53         3.48        11.05 
TCGA-24-2026 TCGA-24-2033 TCGA-25-1313 TCGA-25-1635 TCGA-25-1877 TCGA-25-2392 
       34.82        18.48        26.93        51.22        18.05         1.02 
TCGA-25-2396 TCGA-25-2398 TCGA-29-1691 TCGA-29-1761 TCGA-29-1770 TCGA-29-2432 
        3.02        45.01        47.18        17.00        24.36        11.84 
TCGA-30-1718 TCGA-36-1569 TCGA-36-1570 TCGA-36-1575 TCGA-61-1728 TCGA-61-1743 
       51.91        29.06        21.53         8.55        27.88        43.69 
TCGA-61-1915 TCGA-61-1918 
       67.73        15.75 

$`4P GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1350 
       18.51        11.87        65.49        63.06        48.76        63.98 
TCGA-04-1351 TCGA-04-1361 TCGA-04-1362 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 
       65.46        32.52        44.32        76.54        71.47        82.36 
TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1536 TCGA-04-1542 TCGA-04-1638 
       56.55        41.59        19.99        29.06        84.20        55.40 
TCGA-04-1644 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 
       48.89        28.64        64.64        36.23        31.86        47.70 
TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 
       45.34        29.16         9.47        57.73        17.95        35.54 
TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 
        9.96        38.43        89.33        74.89        41.59        57.57 
TCGA-09-1667 TCGA-09-1669 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 
       61.87        30.48        17.98         5.85         3.02         8.55 
TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2049 TCGA-09-2050 
       97.55         6.15         6.12        35.15       112.37        71.11 
TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 
       63.09        39.75        20.91        26.93        12.46        54.31 
TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 
       81.47        18.48        33.24        32.28        11.70         3.88 
TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 TCGA-13-0717 TCGA-13-0720 
       35.41        35.80        15.12        19.86        24.59        44.55 
TCGA-13-0723 TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 
       39.58        12.39        31.07        15.19        17.79        55.17 
TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 TCGA-13-0762 
        2.47        11.18        11.38        11.54        34.06        32.25 
TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 
       31.04        21.40         8.42        38.93        36.72        28.70 
TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 TCGA-13-0803 
       19.56         8.71         7.79         8.12         8.28        43.82 
TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 
       35.28        35.28        13.61       107.18        91.40        74.27 
TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 
       66.64        70.39        61.81        67.99        69.01        43.36 
TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 
       57.47        56.15        57.07        19.36        47.38        48.33 
TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 
       47.84        44.94        44.84        37.08        27.68        34.06 
TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 
       29.98        21.14        14.89         4.64         6.41         6.08 
TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 
       10.88         6.61         7.36         6.05         5.92         6.84 
TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 
        4.70         4.21         5.33        54.61        87.06        61.71 
TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 
       98.04        20.68        22.39        70.82        82.88        52.44 
TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 
       73.55        38.17        49.22         4.24        54.31        37.61 
TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 
       13.97        32.84        16.57         4.41         4.77         4.14 
TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 TCGA-13-2059 TCGA-13-2061 
        2.56         3.88         3.09        14.24        12.23        10.78 
TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 
        8.75         6.28        23.05        25.94        26.20        72.20 
TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 
       27.48        25.38        19.07        16.67         2.93         2.66 
TCGA-23-1021 TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 TCGA-23-1027 TCGA-23-1028 
       47.54        42.51        40.54        15.39        31.73        49.41 
TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 TCGA-23-1111 
        8.81        29.10        18.87         2.24        51.35         3.22 
TCGA-23-1113 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 TCGA-23-1120 
       31.20         4.57        33.30        86.01       129.96         4.27 
TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 TCGA-23-2072 
        6.38        39.09        33.47        58.13         0.53        24.95 
TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 
      115.89        87.48        91.66        77.00        49.84         2.76 
TCGA-23-2643 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 
        4.70         7.63        19.63        11.64        21.80        41.56 
TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 
        7.66        22.32        54.08        63.55        47.41         6.31 
TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 
        6.38         7.82         7.99         7.86         0.76         6.25 
TCGA-24-1424 TCGA-24-1425 TCGA-24-1426 TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 
        6.02         5.95         5.36        28.34        19.17        18.67 
TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 TCGA-24-1466 TCGA-24-1467 TCGA-24-1469 
       43.53         8.55        72.92        45.14       105.99         9.11 
TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 TCGA-24-1546 TCGA-24-1548 
        3.42         1.18        22.19        26.96        64.27        16.21 
TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 
       56.58        41.06        51.91        41.39        58.09        88.50 
TCGA-24-1556 TCGA-24-1557 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 
       70.62        39.88        44.09        45.50        47.70        25.87 
TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 
       10.26        17.23        90.15        88.34        48.33        38.24 
TCGA-24-1842 TCGA-24-1844 TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 
        8.32         3.72         3.81         4.37        11.28         5.75 
TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-1930 
        5.49         9.80        22.65        30.21        16.41        81.11 
TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 TCGA-24-2027 TCGA-24-2029 
        4.87       151.99        44.84        58.16       109.68        14.43 
TCGA-24-2030 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 
       53.95        28.18        64.01        44.48        57.07        36.16 
TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 
        0.79         0.36        47.54        31.63        70.45        44.58 
TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 
        0.82        67.36        36.23        16.64        33.11        55.86 
TCGA-24-2298 TCGA-25-1312 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 
       53.26         1.02        31.99        51.06        37.02         1.02 
TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 
       34.98        65.00        36.95        33.96         2.99        12.00 
TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 
        2.96        18.58        18.02        15.78         0.36        20.58 
TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 TCGA-25-1870 
        7.86         0.30        56.94        60.59        35.54        14.93 
TCGA-25-1871 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2393 TCGA-25-2397 
       24.99        85.05        13.02        49.05        38.04        12.00 
TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 
       19.99        42.02         2.96        29.00        30.97        26.96 
TCGA-29-1688 TCGA-29-1690 TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 
       78.87        44.71       101.75        38.53         0.79        33.70 
TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 
       31.17        68.28         0.53        16.90        18.64        59.67 
TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 TCGA-29-1762 TCGA-29-1763 
       18.25        41.95        29.23        34.62        85.68        66.77 
TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 TCGA-29-1771 TCGA-29-1774 
       62.93        39.09        31.23        22.98        22.52        17.29 
TCGA-29-1775 TCGA-29-1776 TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 
       12.36        11.84        12.30        14.93         8.35         7.20 
TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 
        5.36        34.62        86.17        65.00        62.47        45.11 
TCGA-29-2429 TCGA-29-2431 TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1853 
        4.87        42.25        11.47         9.76        38.07        36.26 
TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 TCGA-30-1861 
        2.47        15.68         0.26        48.07        44.91        34.78 
TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 
        6.08        36.62         1.18        57.57        24.26        30.05 
TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 
       48.79        45.57        30.18        18.77        22.45         6.71 
TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1571 TCGA-36-1574 
       42.51        44.09         2.17        28.73        22.85        22.55 
TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 TCGA-36-1581 TCGA-36-2529 
       30.05        25.74        27.85        24.23        24.69        35.05 
TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 
       33.01        29.49        29.79        25.91        25.08        23.80 
TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 TCGA-36-2548 
       21.60         2.24        20.98        18.31        20.52        14.17 
TCGA-36-2549 TCGA-36-2551 TCGA-36-2552 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 
        6.05        16.14        11.47        26.04        23.74         9.44 
TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 
        7.56         7.46        22.39         1.48        24.03        11.38 
TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 
       21.14         1.74        22.32        28.96        25.05        25.02 
TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 TCGA-59-2354 
      180.16        80.12        22.32       116.12         9.40        34.39 
TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 
        2.14         5.39        44.78        11.11         8.05        20.94 
TCGA-61-1725 TCGA-61-1727 TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 
       31.40        18.54         4.34        31.76        28.47        48.79 
TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1895 TCGA-61-1899 
       44.84        35.80         2.43        33.67         1.41         8.42 
TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 TCGA-61-1907 
        5.79        11.41        13.02         9.07        34.13        31.30 
TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1917 TCGA-61-1919 
       37.02        42.48        48.92        56.58        43.43        38.17 
TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 
        1.97         5.52        14.50        17.98         3.98        30.61 
TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 
       39.85        30.64         1.18        45.96        45.40         4.80 
TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 
        4.77        51.72        71.74        61.64        58.39        60.62 
TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 
       65.49        55.50         6.48        76.83        20.68        44.52 
TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
      125.72        22.22         6.35        31.07         8.58 

  4P GAIN MUTATED 4P GAIN WILD-TYPE 
             1.02              0.26 
  4P GAIN MUTATED 4P GAIN WILD-TYPE 
           119.08            180.16 
  4P GAIN MUTATED 4P GAIN WILD-TYPE 
           25.135            28.730 
[1] "1.0 - 119.1 (25.1)" "0.3 - 180.2 (28.7)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "4P GAIN MUTATED"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "4P GAIN MUTATED"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "4P GAIN MUTATED"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "4P GAIN MUTATED"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "4P GAIN MUTATED"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "4P GAIN MUTATED"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE"   "4P GAIN MUTATED" "4P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "4P GAIN MUTATED" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
[1] "hr=" "1.5"
D7V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  4P GAIN MUTATED         0    50                0
  4P GAIN WILD-TYPE       2   498                2
D7V3, multiclass
                  clus
vv                 4P GAIN MUTATED 4P GAIN WILD-TYPE
  OMENTUM                        0                 2
  OVARY                         50               498
  PERITONEUM OVARY               0                 2
D7V4, continuous
D7V5, binary
                   cls
clus                  0   1
  4P GAIN MUTATED     0  51
  4P GAIN WILD-TYPE   3 508
[1] "tbl2"
                   cls
clus                [,1] [,2]
  4P GAIN MUTATED      0   51
  4P GAIN WILD-TYPE    3  508
     clus
vv    4P GAIN MUTATED 4P GAIN WILD-TYPE
  NO                0                 3
  YES              51               508
                   vv
clus                R0 R1 R2
  4P GAIN MUTATED    0  2  0
  4P GAIN WILD-TYPE 14 24  2
D7V6, multiclass
[1] "Remove cluster labels:" "4P GAIN MUTATED"       
clus
  4P GAIN MUTATED 4P GAIN WILD-TYPE 
                2                40 
       TCGA-04-1516        TCGA-04-1644        TCGA-13-0807        TCGA-13-0911 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-2414        TCGA-29-2425        TCGA-29-2427        TCGA-29-2428 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-29-2429        TCGA-29-2431        TCGA-29-2434        TCGA-29-2436 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-36-2529        TCGA-36-2530        TCGA-36-2532        TCGA-36-2534 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-36-2537        TCGA-36-2538        TCGA-36-2540        TCGA-36-2542 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-36-2543        TCGA-36-2544        TCGA-36-2545        TCGA-36-2547 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-36-2548        TCGA-36-2549        TCGA-36-2551        TCGA-36-2552 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-42-2582        TCGA-42-2587        TCGA-42-2588        TCGA-42-2589 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-42-2590        TCGA-42-2593        TCGA-57-1993        TCGA-59-2363 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 
       TCGA-59-2372        TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" "4P GAIN WILD-TYPE" 

Clustering(8) Variable = 4Q GAIN MUTATION ANALYSIS
D8V1, survival
                   sevent
clus2                 0   1
  4Q GAIN MUTATED    12  19
  4Q GAIN WILD-TYPE 249 267
  4Q GAIN MUTATED 4Q GAIN WILD-TYPE 
               31               516 
  4Q GAIN MUTATED 4Q GAIN WILD-TYPE 
               19               267 
$`4Q GAIN MUTATED`
TCGA-04-1349 TCGA-04-1356 TCGA-04-1525 TCGA-04-1530 TCGA-09-1668 TCGA-10-0936 
       21.57        49.28        38.37       119.08        55.36        35.80 
TCGA-13-0714 TCGA-13-0794 TCGA-13-0802 TCGA-13-0883 TCGA-13-0920 TCGA-13-2060 
        6.21        30.35         8.19        68.91        13.81         8.58 
TCGA-20-1682 TCGA-23-2645 TCGA-24-0968 TCGA-24-1427 TCGA-24-1558 TCGA-24-1843 
       27.48         4.50        19.63         4.80        19.53         3.48 
TCGA-24-2026 TCGA-25-1313 TCGA-25-1635 TCGA-25-1877 TCGA-25-2396 TCGA-29-1691 
       34.82        26.93        51.22        18.05         3.02        47.18 
TCGA-29-1701 TCGA-29-1702 TCGA-29-1770 TCGA-29-2432 TCGA-36-1575 TCGA-61-1728 
       16.90        18.64        24.36        11.84         8.55        27.88 
TCGA-61-1743 
       43.69 

$`4Q GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1350 
       18.51        11.87        65.49        63.06        48.76        63.98 
TCGA-04-1351 TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 
       65.46        32.52        44.32        33.67        76.54        71.47 
TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1536 TCGA-04-1542 
       82.36        56.55        41.59        19.99        29.06        84.20 
TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 
       55.40        48.89        27.88        28.64        64.64        36.23 
TCGA-04-1652 TCGA-04-1654 TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 
       31.86        47.70        45.34        29.16         9.47        57.73 
TCGA-09-0367 TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 
       17.95        35.54         9.96        38.43        89.33        74.89 
TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 TCGA-09-1669 TCGA-09-1670 TCGA-09-1672 
       41.59        57.57        61.87        30.48        17.98         5.85 
TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 
        3.02         8.55        97.55         6.15         6.12        35.15 
TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 
        4.50       112.37        71.11        63.09        39.75        20.91 
TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 
       26.93        12.46        54.31        25.91        81.47        18.48 
TCGA-10-0930 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0937 
       33.24        32.28        11.70         3.88        35.41        15.12 
TCGA-10-0938 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 TCGA-13-0725 
       19.86        24.59        44.55        39.58         2.73        12.39 
TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 TCGA-13-0757 
       31.07        15.19        17.79        55.17         2.47        11.18 
TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 TCGA-13-0762 TCGA-13-0764 TCGA-13-0766 
       11.38        11.54        34.06        32.25        31.04        21.40 
TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0795 TCGA-13-0797 
        8.42        38.93        36.72        28.70        19.56         8.71 
TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 
        7.79         8.12         8.28        43.82        35.28        35.28 
TCGA-13-0807 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 
       13.61       107.18        91.40        74.27        66.64        70.39 
TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 TCGA-13-0899 
       61.81        67.99        69.01        43.36        57.47        56.15 
TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 
       57.07        19.36        47.38        48.33        47.84        44.94 
TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 
       44.84        37.08        27.68        34.06        29.98        21.14 
TCGA-13-0919 TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 
       14.89         4.64         6.41         6.08        10.88         6.61 
TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 TCGA-13-1411 
        7.36         6.05         5.92         6.84         4.70         4.21 
TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 
        5.33        54.61        87.06        61.71        29.39        98.04 
TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 
       20.68        22.39        70.82        82.88        52.44        73.55 
TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 
       38.17        49.22         4.24        54.31        37.61        38.37 
TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 
       13.97        32.84        16.57         4.21         4.41         4.77 
TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 TCGA-13-2059 
        4.14         2.56         3.88         3.09        14.24        12.23 
TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 
       10.78         8.75         6.28        23.05        25.94        26.20 
TCGA-20-0996 TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 
       72.20        25.38        19.07        16.67         2.93         2.66 
TCGA-23-1021 TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 
       47.54        42.51        40.54        15.39        26.83        31.73 
TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 
       49.41         8.81        29.10        18.87         2.24        51.35 
TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 TCGA-23-1116 TCGA-23-1117 
       54.51         3.22        31.20        68.68         4.57        33.30 
TCGA-23-1118 TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 
       86.01       129.96         4.27         6.38        39.09        33.47 
TCGA-23-1124 TCGA-23-1809 TCGA-23-2072 TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 
       58.13         0.53        24.95       115.89        87.48        91.66 
TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 TCGA-24-0966 TCGA-24-0970 
       77.00        49.84         2.76         4.70         7.63        11.64 
TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 
       21.80        41.56         7.66        22.32        54.08        63.55 
TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 
       47.41         6.31         6.38         7.82         7.99         7.86 
TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 TCGA-24-1426 TCGA-24-1428 
        0.76         6.25         6.02         5.95         5.36        17.36 
TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 
       28.34        19.17        18.67        43.53         8.55        72.92 
TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 
       12.46        45.14       105.99         9.11         3.42         1.18 
TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 
       22.19        26.96        57.37        64.27        16.21        56.58 
TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 
       41.06        51.91        41.39        58.09        88.50        70.62 
TCGA-24-1557 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 
       39.88        44.09        45.50        47.70        25.87        10.26 
TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 
       17.23        90.15        88.34        48.33        38.24         8.32 
TCGA-24-1844 TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 
        3.72         3.81         4.37        11.28         5.75         5.49 
TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 TCGA-24-1930 
        9.80        22.65        30.21        16.41        11.05        81.11 
TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 TCGA-24-2027 TCGA-24-2029 
        4.87       151.99        44.84        58.16       109.68        14.43 
TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 
       53.95        18.48        28.18        64.01        44.48        57.07 
TCGA-24-2260 TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 
       36.16         0.79         0.36        47.54        31.63        70.45 
TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 
       44.58         0.82        67.36        36.23        16.64        33.11 
TCGA-24-2297 TCGA-24-2298 TCGA-25-1312 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 
       55.86        53.26         1.02        31.99        51.06        37.02 
TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 
        1.02        34.98        65.00        36.95        33.96         2.99 
TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 
       12.00         2.96        18.58        18.02        15.78         0.36 
TCGA-25-1628 TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 
       20.58         7.86         0.30        56.94        60.59        35.54 
TCGA-25-1870 TCGA-25-1871 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 
       14.93        24.99        85.05        13.02        49.05         1.02 
TCGA-25-2393 TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 
       38.04        12.00        45.01        19.99        42.02         2.96 
TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1693 
       29.00        30.97        26.96        78.87        44.71       101.75 
TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 
       38.53         0.79        33.70        31.17        68.28         0.53 
TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 
       59.67        18.25        41.95        29.23        34.62        17.00 
TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 
       85.68        66.77        62.93        39.09        31.23        22.98 
TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 TCGA-29-1776 TCGA-29-1777 TCGA-29-1778 
       22.52        17.29        12.36        11.84        12.30        14.93 
TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 
        8.35         7.20         5.36        34.62        86.17        65.00 
TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 TCGA-29-2434 TCGA-29-2436 
       62.47        45.11         4.87        42.25        11.47         9.76 
TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 
       38.07        51.91        36.26         2.47        15.68         0.26 
TCGA-30-1859 TCGA-30-1860 TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 
       48.07        44.91        34.78         6.08        36.62         1.18 
TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 
       57.57        24.26        30.05        48.79        45.57        30.18 
TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 
       18.77        22.45         6.71        42.51        44.09         2.17 
TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1576 
       28.73        29.06        21.53        22.85        22.55        30.05 
TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 TCGA-36-1581 TCGA-36-2529 TCGA-36-2530 
       25.74        27.85        24.23        24.69        35.05        33.01 
TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 
       29.49        29.79        25.91        25.08        23.80        21.60 
TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 
        2.24        20.98        18.31        20.52        14.17         6.05 
TCGA-36-2551 TCGA-36-2552 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 TCGA-42-2589 
       16.14        11.47        26.04        23.74         9.44         7.56 
TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 
        7.46        22.39         1.48        24.03        11.38        21.14 
TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 
        1.74        22.32        28.96        25.05        25.02       180.16 
TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 
       80.12        22.32       116.12         9.40        34.39         2.14 
TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 
        5.39        44.78        11.11         8.05        20.94        31.40 
TCGA-61-1727 TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 
       18.54         4.34        31.76        28.47        48.79        44.84 
TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 
       35.80         2.43        33.67         1.41         8.42         5.79 
TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 
       11.41        13.02         9.07        34.13        31.30        37.02 
TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 
       42.48        48.92        56.58        67.73        43.43        15.75 
TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 
       38.17         1.97         5.52        14.50        17.98         3.98 
TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 
       30.61        39.85        30.64         1.18        45.96        45.40 
TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 
        4.80         4.77        51.72        71.74        61.64        58.39 
TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 
       60.62        65.49        55.50         6.48        76.83        20.68 
TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
       44.52       125.72        22.22         6.35        31.07         8.58 

  4Q GAIN MUTATED 4Q GAIN WILD-TYPE 
             3.02              0.26 
  4Q GAIN MUTATED 4Q GAIN WILD-TYPE 
           119.08            180.16 
  4Q GAIN MUTATED 4Q GAIN WILD-TYPE 
           21.570            28.715 
[1] "3.0 - 119.1 (21.6)" "0.3 - 180.2 (28.7)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "4Q GAIN MUTATED"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED"   "4Q GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "4Q GAIN MUTATED"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED"   "4Q GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "4Q GAIN MUTATED"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED"   "4Q GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"4Q GAIN WILD-TYPE"   "4Q GAIN MUTATED" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
[1] "hr=" "1.5"
D8V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  4Q GAIN MUTATED         0    31                0
  4Q GAIN WILD-TYPE       2   517                2
D8V3, multiclass
                  clus
vv                 4Q GAIN MUTATED 4Q GAIN WILD-TYPE
  OMENTUM                        0                 2
  OVARY                         31               517
  PERITONEUM OVARY               0                 2
D8V4, continuous
D8V5, binary
                   cls
clus                  0   1
  4Q GAIN MUTATED     0  31
  4Q GAIN WILD-TYPE   3 528
[1] "tbl2"
                   cls
clus                [,1] [,2]
  4Q GAIN MUTATED      0   31
  4Q GAIN WILD-TYPE    3  528
     clus
vv    4Q GAIN MUTATED 4Q GAIN WILD-TYPE
  NO                0                 3
  YES              31               528
                   vv
clus                R0 R1 R2
  4Q GAIN MUTATED    0  1  0
  4Q GAIN WILD-TYPE 14 25  2
D8V6, multiclass
[1] "Remove cluster labels:" "4Q GAIN MUTATED"       
clus
  4Q GAIN MUTATED 4Q GAIN WILD-TYPE 
                1                41 
       TCGA-04-1516        TCGA-04-1644        TCGA-13-0807        TCGA-13-0911 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-29-2414        TCGA-29-2425        TCGA-29-2427 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-2428        TCGA-29-2429        TCGA-29-2431        TCGA-29-2434 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-29-2436        TCGA-36-2529        TCGA-36-2530        TCGA-36-2532 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-2534        TCGA-36-2537        TCGA-36-2538        TCGA-36-2540 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-2542        TCGA-36-2543        TCGA-36-2544        TCGA-36-2545 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-2547        TCGA-36-2548        TCGA-36-2549        TCGA-36-2551 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-36-2552        TCGA-42-2582        TCGA-42-2587        TCGA-42-2588 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-42-2589        TCGA-42-2590        TCGA-42-2593        TCGA-57-1993 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-59-2363        TCGA-59-2372        TCGA-61-2612        TCGA-61-2613 
"4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" "4Q GAIN WILD-TYPE" 
       TCGA-61-2614 
"4Q GAIN WILD-TYPE" 

Clustering(9) Variable = 5P GAIN MUTATION ANALYSIS
D9V1, survival
                   sevent
clus2                 0   1
  5P GAIN MUTATED    95  88
  5P GAIN WILD-TYPE 166 198
  5P GAIN MUTATED 5P GAIN WILD-TYPE 
              183               364 
  5P GAIN MUTATED 5P GAIN WILD-TYPE 
               88               198 
$`5P GAIN MUTATED`
TCGA-04-1337 TCGA-04-1342 TCGA-04-1346 TCGA-04-1347 TCGA-04-1349 TCGA-04-1350 
        2.01        18.51        65.49        63.06        21.57        63.98 
TCGA-04-1364 TCGA-04-1530 TCGA-04-1542 TCGA-04-1646 TCGA-04-1649 TCGA-04-1654 
       33.67       119.08        84.20        27.88        64.64        47.70 
TCGA-09-0366 TCGA-09-0367 TCGA-09-1661 TCGA-09-1666 TCGA-09-1670 TCGA-09-1674 
       57.73        17.95        38.43        57.57        17.98         8.55 
TCGA-09-1675 TCGA-09-2043 TCGA-09-2054 TCGA-09-2056 TCGA-10-0927 TCGA-10-0930 
       97.55         6.15        20.91        12.46        81.47        33.24 
TCGA-10-0933 TCGA-10-0936 TCGA-13-0717 TCGA-13-0723 TCGA-13-0725 TCGA-13-0727 
       11.70        35.80        24.59        39.58        12.39        15.19 
TCGA-13-0730 TCGA-13-0751 TCGA-13-0757 TCGA-13-0760 TCGA-13-0766 TCGA-13-0768 
       17.79        55.17        11.18        11.54        21.40         8.42 
TCGA-13-0792 TCGA-13-0794 TCGA-13-0801 TCGA-13-0883 TCGA-13-0886 TCGA-13-0889 
       36.72        30.35         8.28        68.91        74.27        61.81 
TCGA-13-0899 TCGA-13-0901 TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 TCGA-13-0911 
       56.15        19.36        48.33        47.84        44.94        27.68 
TCGA-13-1403 TCGA-13-1404 TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 TCGA-13-1411 
       10.88         6.61         6.05         5.92         6.84         4.21 
TCGA-13-1481 TCGA-13-1484 TCGA-13-1488 TCGA-13-1492 TCGA-13-1501 TCGA-13-1504 
       87.06        98.04        70.82        73.55        32.84        16.57 
TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-1512 TCGA-13-2065 TCGA-20-0990 
        4.21         4.41         4.77         3.09         8.75        25.94 
TCGA-20-0991 TCGA-20-1685 TCGA-20-1686 TCGA-23-1024 TCGA-23-1029 TCGA-23-1032 
       26.20        16.67         2.93        15.39         8.81         2.24 
TCGA-23-1111 TCGA-23-1116 TCGA-23-1119 TCGA-23-1121 TCGA-23-1122 TCGA-23-1809 
        3.22         4.57       129.96         6.38        39.09         0.53 
TCGA-23-2079 TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0975 
       91.66        49.84         2.76         4.70         4.50        21.80 
TCGA-24-0979 TCGA-24-0982 TCGA-24-1104 TCGA-24-1417 TCGA-24-1418 TCGA-24-1423 
       41.56        22.32        63.55         7.82         7.99         6.25 
TCGA-24-1425 TCGA-24-1428 TCGA-24-1436 TCGA-24-1469 TCGA-24-1471 TCGA-24-1474 
        5.95        17.36         8.55         9.11         1.18        22.19 
TCGA-24-1549 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1604 
       56.58        58.09        88.50        70.62        39.88        88.34 
TCGA-24-1616 TCGA-24-1842 TCGA-24-1844 TCGA-24-1845 TCGA-24-1847 TCGA-24-1850 
       38.24         8.32         3.72         3.81        11.28         5.49 
TCGA-24-1923 TCGA-24-1924 TCGA-24-1928 TCGA-24-2020 TCGA-24-2026 TCGA-24-2030 
       22.65        30.21        11.05       151.99        34.82        53.95 
TCGA-24-2260 TCGA-24-2267 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 TCGA-24-2295 
       36.16        47.54        44.58         0.82        67.36        33.11 
TCGA-24-2298 TCGA-25-1318 TCGA-25-1319 TCGA-25-1321 TCGA-25-1322 TCGA-25-1329 
       53.26        34.98        65.00        33.96         2.99         2.96 
TCGA-25-1623 TCGA-25-1627 TCGA-25-1631 TCGA-25-1634 TCGA-25-1877 TCGA-25-1878 
       18.58         0.36         0.30        35.54        18.05        85.05 
TCGA-25-2392 TCGA-25-2396 TCGA-25-2404 TCGA-29-1688 TCGA-29-1691 TCGA-29-1693 
        1.02         3.02        29.00        78.87        47.18       101.75 
TCGA-29-1695 TCGA-29-1707 TCGA-29-1761 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 
        0.79        41.95        17.00        66.77        62.93        39.09 
TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 TCGA-29-1774 TCGA-29-2425 TCGA-29-2432 
       31.23        22.98        24.36        17.29        65.00        11.84 
TCGA-30-1718 TCGA-31-1950 TCGA-36-1568 TCGA-36-1569 TCGA-36-1576 TCGA-36-1578 
       51.91        18.77        28.73        29.06        30.05        27.85 
TCGA-36-1581 TCGA-36-2529 TCGA-36-2543 TCGA-36-2548 TCGA-42-2582 TCGA-42-2588 
       24.69        35.05         2.24        14.17        26.04         9.44 
TCGA-42-2593 TCGA-57-1582 TCGA-57-1585 TCGA-57-1993 TCGA-61-1725 TCGA-61-1733 
        1.48        24.03         1.74        25.05        31.40        31.76 
TCGA-61-1899 TCGA-61-1903 TCGA-61-1914 TCGA-61-1918 TCGA-61-1919 TCGA-61-2003 
        8.42        13.02        56.58        15.75        38.17         3.98 
TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 TCGA-61-2087 TCGA-61-2098 TCGA-61-2101 
       30.61        39.85        30.64         4.80        65.49        55.50 
TCGA-61-2111 TCGA-61-2612 TCGA-61-2614 
      125.72         6.35         8.58 

$`5P GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1338 TCGA-04-1343 
       40.24        41.00         1.81        49.15        46.62        11.87 
TCGA-04-1348 TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 TCGA-04-1362 TCGA-04-1365 
       48.76        65.46        49.28        32.52        44.32        76.54 
TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 
       71.47        82.36        56.55        41.59        19.99        38.37 
TCGA-04-1536 TCGA-04-1638 TCGA-04-1644 TCGA-04-1648 TCGA-04-1651 TCGA-04-1652 
       29.06        55.40        48.89        28.64        36.23        31.86 
TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0369 TCGA-09-1659 TCGA-09-1662 
       45.34        29.16         9.47        35.54         9.96        89.33 
TCGA-09-1664 TCGA-09-1665 TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 TCGA-09-1672 
       74.89        41.59        61.87        55.36        30.48         5.85 
TCGA-09-1673 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 
        3.02         6.12        35.15         4.50       112.37        71.11 
TCGA-09-2051 TCGA-09-2053 TCGA-09-2055 TCGA-10-0925 TCGA-10-0926 TCGA-10-0928 
       63.09        39.75        26.93        54.31        25.91        18.48 
TCGA-10-0931 TCGA-10-0934 TCGA-10-0935 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 
       32.28         3.88        35.41        15.12        19.86         6.21 
TCGA-13-0720 TCGA-13-0724 TCGA-13-0726 TCGA-13-0755 TCGA-13-0758 TCGA-13-0761 
       44.55         2.73        31.07         2.47        11.38        34.06 
TCGA-13-0762 TCGA-13-0764 TCGA-13-0791 TCGA-13-0793 TCGA-13-0795 TCGA-13-0797 
       32.25        31.04        38.93        28.70        19.56         8.71 
TCGA-13-0799 TCGA-13-0800 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 
        7.79         8.12         8.19        43.82        35.28        35.28 
TCGA-13-0807 TCGA-13-0884 TCGA-13-0885 TCGA-13-0887 TCGA-13-0888 TCGA-13-0890 
       13.61       107.18        91.40        66.64        70.39        67.99 
TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 TCGA-13-0900 TCGA-13-0903 TCGA-13-0908 
       69.01        43.36        57.47        57.07        47.38        44.84 
TCGA-13-0910 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 
       37.08        34.06        29.98        21.14        14.89        13.81 
TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1405 TCGA-13-1410 TCGA-13-1412 
        4.64         6.41         6.08         7.36         4.70         5.33 
TCGA-13-1477 TCGA-13-1482 TCGA-13-1483 TCGA-13-1485 TCGA-13-1487 TCGA-13-1489 
       54.61        61.71        29.39        20.68        22.39        82.88 
TCGA-13-1491 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 
       52.44        38.17        49.22         4.24        54.31        37.61 
TCGA-13-1499 TCGA-13-1500 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-2057 
       38.37        13.97         4.14         2.56         3.88        14.24 
TCGA-13-2059 TCGA-13-2060 TCGA-13-2061 TCGA-13-2071 TCGA-20-0987 TCGA-20-0996 
       12.23         8.58        10.78         6.28        23.05        72.20 
TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 TCGA-20-1687 TCGA-23-1021 TCGA-23-1022 
       27.48        25.38        19.07         2.66        47.54        42.51 
TCGA-23-1023 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1030 TCGA-23-1031 
       40.54        26.83        31.73        49.41        29.10        18.87 
TCGA-23-1109 TCGA-23-1110 TCGA-23-1113 TCGA-23-1114 TCGA-23-1117 TCGA-23-1118 
       51.35        54.51        31.20        68.68        33.30        86.01 
TCGA-23-1120 TCGA-23-1123 TCGA-23-1124 TCGA-23-2072 TCGA-23-2077 TCGA-23-2078 
        4.27        33.47        58.13        24.95       115.89        87.48 
TCGA-23-2081 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0980 TCGA-24-1103 
       77.00         7.63        19.63        11.64         7.66        54.08 
TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1419 TCGA-24-1422 TCGA-24-1424 
       47.41         6.31         6.38         7.86         0.76         6.02 
TCGA-24-1426 TCGA-24-1427 TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 
        5.36         4.80        28.34        19.17        18.67        43.53 
TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 TCGA-24-1470 TCGA-24-1544 
       72.92        12.46        45.14       105.99         3.42        26.96 
TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 
       57.37        64.27        16.21        41.06        51.91        41.39 
TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 
       19.53        44.09        45.50        47.70        25.87        10.26 
TCGA-24-1567 TCGA-24-1603 TCGA-24-1614 TCGA-24-1843 TCGA-24-1846 TCGA-24-1849 
       17.23        90.15        48.33         3.48         4.37         5.75 
TCGA-24-1920 TCGA-24-1927 TCGA-24-1930 TCGA-24-2019 TCGA-24-2023 TCGA-24-2024 
        9.80        16.41        81.11         4.87        44.84        58.16 
TCGA-24-2027 TCGA-24-2029 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 
      109.68        14.43        18.48        28.18        64.01        44.48 
TCGA-24-2254 TCGA-24-2261 TCGA-24-2262 TCGA-24-2271 TCGA-24-2280 TCGA-24-2290 
       57.07         0.79         0.36        31.63        70.45        36.23 
TCGA-24-2293 TCGA-24-2297 TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 
       16.64        55.86         1.02        26.93        31.99        51.06 
TCGA-25-1316 TCGA-25-1317 TCGA-25-1320 TCGA-25-1323 TCGA-25-1625 TCGA-25-1626 
       37.02         1.02        36.95        12.00        18.02        15.78 
TCGA-25-1628 TCGA-25-1630 TCGA-25-1632 TCGA-25-1633 TCGA-25-1635 TCGA-25-1870 
       20.58         7.86        56.94        60.59        51.22        14.93 
TCGA-25-1871 TCGA-25-2042 TCGA-25-2391 TCGA-25-2393 TCGA-25-2397 TCGA-25-2398 
       24.99        13.02        49.05        38.04        12.00        45.01 
TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 TCGA-25-2408 TCGA-25-2409 TCGA-29-1690 
       19.99        42.02         2.96        30.97        26.96        44.71 
TCGA-29-1694 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 
       38.53        33.70        31.17        68.28         0.53        16.90 
TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1710 TCGA-29-1711 TCGA-29-1762 
       18.64        59.67        18.25        29.23        34.62        85.68 
TCGA-29-1771 TCGA-29-1775 TCGA-29-1776 TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 
       22.52        12.36        11.84        12.30        14.93         8.35 
TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 TCGA-29-2427 TCGA-29-2428 
        7.20         5.36        34.62        86.17        62.47        45.11 
TCGA-29-2429 TCGA-29-2431 TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1853 
        4.87        42.25        11.47         9.76        38.07        36.26 
TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 TCGA-30-1861 
        2.47        15.68         0.26        48.07        44.91        34.78 
TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 
        6.08        36.62         1.18        57.57        24.26        30.05 
TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 
       48.79        45.57        30.18        22.45         6.71        42.51 
TCGA-31-1956 TCGA-31-1959 TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 
       44.09         2.17        21.53        22.85        22.55         8.55 
TCGA-36-1577 TCGA-36-1580 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 
       25.74        24.23        33.01        29.49        29.79        25.91 
TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 
       25.08        23.80        21.60        20.98        18.31        20.52 
TCGA-36-2549 TCGA-36-2551 TCGA-36-2552 TCGA-42-2587 TCGA-42-2589 TCGA-42-2590 
        6.05        16.14        11.47        23.74         7.56         7.46 
TCGA-42-2591 TCGA-57-1583 TCGA-57-1584 TCGA-57-1586 TCGA-57-1992 TCGA-57-1994 
       22.39        11.38        21.14        22.32        28.96        25.02 
TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 TCGA-59-2354 
      180.16        80.12        22.32       116.12         9.40        34.39 
TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 
        2.14         5.39        44.78        11.11         8.05        20.94 
TCGA-61-1727 TCGA-61-1728 TCGA-61-1730 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 
       18.54        27.88         4.34        28.47        48.79        44.84 
TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 TCGA-61-1900 
       35.80         2.43        33.67        43.69         1.41         5.79 
TCGA-61-1901 TCGA-61-1904 TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 
       11.41         9.07        34.13        31.30        37.02        42.48 
TCGA-61-1913 TCGA-61-1915 TCGA-61-1917 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 
       48.92        67.73        43.43         1.97         5.52        14.50 
TCGA-61-2002 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2088 TCGA-61-2092 
       17.98         1.18        45.96        45.40         4.77        51.72 
TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 TCGA-61-2102 TCGA-61-2104 
       71.74        61.64        58.39        60.62         6.48        76.83 
TCGA-61-2109 TCGA-61-2110 TCGA-61-2113 TCGA-61-2613 
       20.68        44.52        22.22        31.07 

  5P GAIN MUTATED 5P GAIN WILD-TYPE 
             0.30              0.26 
  5P GAIN MUTATED 5P GAIN WILD-TYPE 
           151.99            180.16 
  5P GAIN MUTATED 5P GAIN WILD-TYPE 
            24.69             29.13 
[1] "0.3 - 152.0 (24.7)" "0.3 - 180.2 (29.1)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
  "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
  "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
  "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
  "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
  "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
  "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED"   "5P GAIN MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "5P GAIN MUTATED"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"5P GAIN WILD-TYPE" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" "5P GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "5P GAIN MUTATED" "5P GAIN WILD-TYPE"   "5P GAIN MUTATED" 
[1] "hr=" "1.2"
D9V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  5P GAIN MUTATED         0   184                2
  5P GAIN WILD-TYPE       2   364                0
D9V3, multiclass
                  clus
vv                 5P GAIN MUTATED 5P GAIN WILD-TYPE
  OMENTUM                        0                 2
  OVARY                        184               364
  PERITONEUM OVARY               2                 0
D9V4, continuous
D9V5, binary
                   cls
clus                  0   1
  5P GAIN MUTATED     1 189
  5P GAIN WILD-TYPE   2 370
[1] "tbl2"
                   cls
clus                [,1] [,2]
  5P GAIN MUTATED      1  189
  5P GAIN WILD-TYPE    2  370
     clus
vv    5P GAIN MUTATED 5P GAIN WILD-TYPE
  NO                1                 2
  YES             189               370
                   vv
clus                R0 R1 R2
  5P GAIN MUTATED    2  8  2
  5P GAIN WILD-TYPE 12 18  0
D9V6, multiclass
    clus
vv   5P GAIN MUTATED 5P GAIN WILD-TYPE
  R0               2                12
  R1               8                18
  R2               2                 0

Clustering(10) Variable = 5Q GAIN MUTATION ANALYSIS
D10V1, survival
                   sevent
clus2                 0   1
  5Q GAIN MUTATED    27  23
  5Q GAIN WILD-TYPE 234 263
  5Q GAIN MUTATED 5Q GAIN WILD-TYPE 
               50               497 
  5Q GAIN MUTATED 5Q GAIN WILD-TYPE 
               23               263 
$`5Q GAIN MUTATED`
TCGA-04-1337 TCGA-04-1347 TCGA-04-1349 TCGA-04-1364 TCGA-04-1530 TCGA-04-1542 
        2.01        63.06        21.57        33.67       119.08        84.20 
TCGA-09-1661 TCGA-09-1666 TCGA-09-1670 TCGA-10-0930 TCGA-10-0936 TCGA-13-0751 
       38.43        57.57        17.98        33.24        35.80        55.17 
TCGA-13-0768 TCGA-13-0792 TCGA-13-0911 TCGA-13-1409 TCGA-13-1492 TCGA-13-1504 
        8.42        36.72        27.68         6.84        73.55        16.57 
TCGA-13-2065 TCGA-23-1111 TCGA-23-1116 TCGA-23-2079 TCGA-23-2645 TCGA-24-1104 
        8.75         3.22         4.57        91.66         4.50        63.55 
TCGA-24-1417 TCGA-24-1428 TCGA-24-1436 TCGA-24-1471 TCGA-24-1556 TCGA-24-1604 
        7.82        17.36         8.55         1.18        70.62        88.34 
TCGA-24-1845 TCGA-24-1850 TCGA-24-1923 TCGA-24-2288 TCGA-25-1329 TCGA-25-1631 
        3.81         5.49        22.65         0.82         2.96         0.30 
TCGA-25-2392 TCGA-29-1688 TCGA-29-1693 TCGA-29-1763 TCGA-29-1769 TCGA-29-1770 
        1.02        78.87       101.75        66.77        22.98        24.36 
TCGA-29-2432 TCGA-36-1569 TCGA-36-2529 TCGA-36-2543 TCGA-61-1725 TCGA-61-2009 
       11.84        29.06        35.05         2.24        31.40        39.85 
TCGA-61-2612 TCGA-61-2614 
        6.35         8.58 

$`5Q GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1338 TCGA-04-1342 
       40.24        41.00         1.81        49.15        46.62        18.51 
TCGA-04-1343 TCGA-04-1346 TCGA-04-1348 TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 
       11.87        65.49        48.76        63.98        65.46        49.28 
TCGA-04-1361 TCGA-04-1362 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 
       32.52        44.32        76.54        71.47        82.36        56.55 
TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 TCGA-04-1536 TCGA-04-1638 TCGA-04-1644 
       41.59        19.99        38.37        29.06        55.40        48.89 
TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 
       27.88        28.64        64.64        36.23        31.86        47.70 
TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 
       45.34        29.16         9.47        57.73        17.95        35.54 
TCGA-09-1659 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1667 TCGA-09-1668 
        9.96        89.33        74.89        41.59        61.87        55.36 
TCGA-09-1669 TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 
       30.48         5.85         3.02         8.55        97.55         6.15 
TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 
        6.12        35.15         4.50       112.37        71.11        63.09 
TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 
       39.75        20.91        26.93        12.46        54.31        25.91 
TCGA-10-0927 TCGA-10-0928 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 
       81.47        18.48        32.28        11.70         3.88        35.41 
TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 
       15.12        19.86         6.21        24.59        44.55        39.58 
TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0755 
        2.73        12.39        31.07        15.19        17.79         2.47 
TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 TCGA-13-0762 TCGA-13-0764 
       11.18        11.38        11.54        34.06        32.25        31.04 
TCGA-13-0766 TCGA-13-0791 TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 
       21.40        38.93        28.70        30.35        19.56         8.71 
TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 
        7.79         8.12         8.28         8.19        43.82        35.28 
TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 
       35.28        13.61        68.91       107.18        91.40        74.27 
TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 
       66.64        70.39        61.81        67.99        69.01        43.36 
TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 
       57.47        56.15        57.07        19.36        47.38        48.33 
TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0912 TCGA-13-0913 
       47.84        44.94        44.84        37.08        34.06        29.98 
TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 
       21.14        14.89        13.81         4.64         6.41         6.08 
TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 TCGA-13-1410 
       10.88         6.61         7.36         6.05         5.92         4.70 
TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 
        4.21         5.33        54.61        87.06        61.71        29.39 
TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 
       98.04        20.68        22.39        70.82        82.88        52.44 
TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 
       38.17        49.22         4.24        54.31        37.61        38.37 
TCGA-13-1500 TCGA-13-1501 TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 
       13.97        32.84         4.21         4.41         4.77         4.14 
TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 TCGA-13-2059 TCGA-13-2060 
        2.56         3.88         3.09        14.24        12.23         8.58 
TCGA-13-2061 TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 
       10.78         6.28        23.05        25.94        26.20        72.20 
TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 
       27.48        25.38        19.07        16.67         2.93         2.66 
TCGA-23-1021 TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 
       47.54        42.51        40.54        15.39        26.83        31.73 
TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 
       49.41         8.81        29.10        18.87         2.24        51.35 
TCGA-23-1110 TCGA-23-1113 TCGA-23-1114 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 
       54.51        31.20        68.68        33.30        86.01       129.96 
TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 
        4.27         6.38        39.09        33.47        58.13         0.53 
TCGA-23-2072 TCGA-23-2077 TCGA-23-2078 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 
       24.95       115.89        87.48        77.00        49.84         2.76 
TCGA-23-2643 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 
        4.70         7.63        19.63        11.64        21.80        41.56 
TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 
        7.66        22.32        54.08        47.41         6.31         6.38 
TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 
        7.99         7.86         0.76         6.25         6.02         5.95 
TCGA-24-1426 TCGA-24-1427 TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 
        5.36         4.80        28.34        19.17        18.67        43.53 
TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 
       72.92        12.46        45.14       105.99         9.11         3.42 
TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 
       22.19        26.96        57.37        64.27        16.21        56.58 
TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1557 
       41.06        51.91        41.39        58.09        88.50        39.88 
TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 
       19.53        44.09        45.50        47.70        25.87        10.26 
TCGA-24-1567 TCGA-24-1603 TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 
       17.23        90.15        48.33        38.24         8.32         3.48 
TCGA-24-1844 TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 TCGA-24-1920 TCGA-24-1924 
        3.72         4.37        11.28         5.75         9.80        30.21 
TCGA-24-1927 TCGA-24-1928 TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 
       16.41        11.05        81.11         4.87       151.99        44.84 
TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 
       58.16        34.82       109.68        14.43        53.95        18.48 
TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 
       28.18        64.01        44.48        57.07        36.16         0.79 
TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2289 
        0.36        47.54        31.63        70.45        44.58        67.36 
TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 TCGA-24-2298 TCGA-25-1312 
       36.23        16.64        33.11        55.86        53.26         1.02 
TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 
       26.93        31.99        51.06        37.02         1.02        34.98 
TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1623 
       65.00        36.95        33.96         2.99        12.00        18.58 
TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 TCGA-25-1630 TCGA-25-1632 
       18.02        15.78         0.36        20.58         7.86        56.94 
TCGA-25-1633 TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 
       60.59        35.54        51.22        14.93        24.99        18.05 
TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 
       85.05        13.02        49.05        38.04         3.02        12.00 
TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 
       45.01        19.99        42.02         2.96        29.00        30.97 
TCGA-25-2409 TCGA-29-1690 TCGA-29-1691 TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 
       26.96        44.71        47.18        38.53         0.79        33.70 
TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 
       31.17        68.28         0.53        16.90        18.64        59.67 
TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 
       18.25        41.95        29.23        34.62        17.00        85.68 
TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 
       62.93        39.09        31.23        22.52        17.29        12.36 
TCGA-29-1776 TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 
       11.84        12.30        14.93         8.35         7.20         5.36 
TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 
       34.62        86.17        65.00        62.47        45.11         4.87 
TCGA-29-2431 TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 
       42.25        11.47         9.76        38.07        51.91        36.26 
TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 TCGA-30-1861 
        2.47        15.68         0.26        48.07        44.91        34.78 
TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 
        6.08        36.62         1.18        57.57        24.26        30.05 
TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 
       48.79        45.57        30.18        18.77        22.45         6.71 
TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1570 TCGA-36-1571 
       42.51        44.09         2.17        28.73        21.53        22.85 
TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 
       22.55         8.55        30.05        25.74        27.85        24.23 
TCGA-36-1581 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 
       24.69        33.01        29.49        29.79        25.91        25.08 
TCGA-36-2540 TCGA-36-2542 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 TCGA-36-2548 
       23.80        21.60        20.98        18.31        20.52        14.17 
TCGA-36-2549 TCGA-36-2551 TCGA-36-2552 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 
        6.05        16.14        11.47        26.04        23.74         9.44 
TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 
        7.56         7.46        22.39         1.48        24.03        11.38 
TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 
       21.14         1.74        22.32        28.96        25.05        25.02 
TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 TCGA-59-2354 
      180.16        80.12        22.32       116.12         9.40        34.39 
TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 
        2.14         5.39        44.78        11.11         8.05        20.94 
TCGA-61-1727 TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 
       18.54        27.88         4.34        31.76        28.47        48.79 
TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 
       44.84        35.80         2.43        33.67        43.69         1.41 
TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 
        8.42         5.79        11.41        13.02         9.07        34.13 
TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 
       31.30        37.02        42.48        48.92        56.58        67.73 
TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 
       43.43        15.75        38.17         1.97         5.52        14.50 
TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 
       17.98         3.98        30.61        30.64         1.18        45.96 
TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 
       45.40         4.80         4.77        51.72        71.74        61.64 
TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 
       58.39        60.62        65.49        55.50         6.48        76.83 
TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 TCGA-61-2613 
       20.68        44.52       125.72        22.22        31.07 

  5Q GAIN MUTATED 5Q GAIN WILD-TYPE 
             0.30              0.26 
  5Q GAIN MUTATED 5Q GAIN WILD-TYPE 
           119.08            180.16 
  5Q GAIN MUTATED 5Q GAIN WILD-TYPE 
           22.815            28.640 
[1] "0.3 - 119.1 (22.8)" "0.3 - 180.2 (28.6)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" "5Q GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "5Q GAIN MUTATED" "5Q GAIN WILD-TYPE"   "5Q GAIN MUTATED" 
[1] "hr=" "1.2"
D10V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  5Q GAIN MUTATED         0    50                1
  5Q GAIN WILD-TYPE       2   498                1
D10V3, multiclass
                  clus
vv                 5Q GAIN MUTATED 5Q GAIN WILD-TYPE
  OMENTUM                        0                 2
  OVARY                         50               498
  PERITONEUM OVARY               1                 1
D10V4, continuous
D10V5, binary
                   cls
clus                  0   1
  5Q GAIN MUTATED     0  53
  5Q GAIN WILD-TYPE   3 506
[1] "tbl2"
                   cls
clus                [,1] [,2]
  5Q GAIN MUTATED      0   53
  5Q GAIN WILD-TYPE    3  506
     clus
vv    5Q GAIN MUTATED 5Q GAIN WILD-TYPE
  NO                0                 3
  YES              53               506
                   vv
clus                R0 R1 R2
  5Q GAIN MUTATED    0  6  0
  5Q GAIN WILD-TYPE 14 20  2
D10V6, multiclass
    clus
vv   5Q GAIN MUTATED 5Q GAIN WILD-TYPE
  R0               0                14
  R1               6                20
  R2               0                 2

Clustering(11) Variable = 6P GAIN MUTATION ANALYSIS
D11V1, survival
                   sevent
clus2                 0   1
  6P GAIN MUTATED    80  75
  6P GAIN WILD-TYPE 181 211
  6P GAIN MUTATED 6P GAIN WILD-TYPE 
              155               392 
  6P GAIN MUTATED 6P GAIN WILD-TYPE 
               75               211 
$`6P GAIN MUTATED`
TCGA-04-1342 TCGA-04-1346 TCGA-04-1347 TCGA-04-1349 TCGA-04-1356 TCGA-04-1362 
       18.51        65.49        63.06        21.57        49.28        44.32 
TCGA-04-1364 TCGA-04-1516 TCGA-04-1525 TCGA-04-1530 TCGA-04-1536 TCGA-09-0364 
       33.67        41.59        38.37       119.08        29.06        29.16 
TCGA-09-0366 TCGA-09-1661 TCGA-09-1662 TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 
       57.73        38.43        89.33        41.59        57.57        61.87 
TCGA-09-1668 TCGA-09-1669 TCGA-09-1674 TCGA-09-2049 TCGA-09-2051 TCGA-09-2054 
       55.36        30.48         8.55       112.37        63.09        20.91 
TCGA-10-0930 TCGA-10-0933 TCGA-13-0717 TCGA-13-0724 TCGA-13-0760 TCGA-13-0764 
       33.24        11.70        24.59         2.73        11.54        31.04 
TCGA-13-0792 TCGA-13-0793 TCGA-13-0795 TCGA-13-0800 TCGA-13-0885 TCGA-13-0886 
       36.72        28.70        19.56         8.12        91.40        74.27 
TCGA-13-0920 TCGA-13-0923 TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 TCGA-13-1481 
       13.81         6.41         6.05         5.92         6.84        87.06 
TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 TCGA-13-1496 TCGA-13-1499 TCGA-13-1510 
       22.39        70.82        82.88         4.24        38.37         2.56 
TCGA-13-2057 TCGA-13-2060 TCGA-13-2061 TCGA-20-0990 TCGA-20-0991 TCGA-20-1682 
       14.24         8.58        10.78        25.94        26.20        27.48 
TCGA-20-1685 TCGA-20-1686 TCGA-23-1023 TCGA-23-1031 TCGA-23-1109 TCGA-23-1110 
       16.67         2.93        40.54        18.87        51.35        54.51 
TCGA-23-1114 TCGA-23-1116 TCGA-23-1120 TCGA-23-1124 TCGA-23-1809 TCGA-23-2077 
       68.68         4.57         4.27        58.13         0.53       115.89 
TCGA-23-2079 TCGA-24-0982 TCGA-24-1417 TCGA-24-1423 TCGA-24-1424 TCGA-24-1469 
       91.66        22.32         7.82         6.25         6.02         9.11 
TCGA-24-1474 TCGA-24-1558 TCGA-24-1563 TCGA-24-1564 TCGA-24-1604 TCGA-24-1614 
       22.19        19.53        47.70        25.87        88.34        48.33 
TCGA-24-1850 TCGA-24-2020 TCGA-24-2026 TCGA-24-2254 TCGA-24-2261 TCGA-24-2267 
        5.49       151.99        34.82        57.07         0.79        47.54 
TCGA-24-2281 TCGA-25-1317 TCGA-25-1319 TCGA-25-1323 TCGA-25-1634 TCGA-25-1870 
       44.58         1.02        65.00        12.00        35.54        14.93 
TCGA-25-1871 TCGA-25-1877 TCGA-25-1878 TCGA-25-2392 TCGA-25-2398 TCGA-25-2400 
       24.99        18.05        85.05         1.02        45.01        42.02 
TCGA-25-2401 TCGA-25-2404 TCGA-29-1691 TCGA-29-1695 TCGA-29-1698 TCGA-29-1701 
        2.96        29.00        47.18         0.79        68.28        16.90 
TCGA-29-1702 TCGA-29-1710 TCGA-29-1764 TCGA-29-1769 TCGA-29-1770 TCGA-29-1774 
       18.64        29.23        62.93        22.98        24.36        17.29 
TCGA-29-1778 TCGA-29-2414 TCGA-29-2425 TCGA-29-2432 TCGA-30-1718 TCGA-30-1856 
       14.93        86.17        65.00        11.84        51.91        15.68 
TCGA-30-1861 TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1571 
       34.78         6.71        42.51        44.09         2.17        22.85 
TCGA-36-1575 TCGA-36-1576 TCGA-36-1580 TCGA-36-1581 TCGA-36-2529 TCGA-36-2542 
        8.55        30.05        24.23        24.69        35.05        21.60 
TCGA-36-2545 TCGA-36-2551 TCGA-36-2552 TCGA-42-2593 TCGA-57-1582 TCGA-57-1585 
       18.31        16.14        11.47         1.48        24.03         1.74 
TCGA-57-1586 TCGA-57-1993 TCGA-57-1994 TCGA-61-1722 TCGA-61-1730 TCGA-61-1737 
       22.32        25.05        25.02         8.05         4.34        44.84 
TCGA-61-1741 TCGA-61-1743 TCGA-61-1907 TCGA-61-1915 TCGA-61-1918 TCGA-61-1919 
       33.67        43.69        31.30        67.73        15.75        38.17 
TCGA-61-1998 TCGA-61-2003 TCGA-61-2009 TCGA-61-2088 TCGA-61-2097 TCGA-61-2098 
        5.52         3.98        39.85         4.77        60.62        65.49 
TCGA-61-2104 TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 TCGA-61-2614 
       76.83       125.72        22.22         6.35         8.58 

$`6P GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1343 TCGA-04-1348 TCGA-04-1350 TCGA-04-1351 TCGA-04-1361 TCGA-04-1365 
       11.87        48.76        63.98        65.46        32.52        76.54 
TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 TCGA-04-1517 TCGA-04-1542 TCGA-04-1638 
       71.47        82.36        56.55        19.99        84.20        55.40 
TCGA-04-1644 TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 
       48.89        27.88        28.64        64.64        36.23        31.86 
TCGA-04-1654 TCGA-04-1655 TCGA-09-0365 TCGA-09-0367 TCGA-09-0369 TCGA-09-1659 
       47.70        45.34         9.47        17.95        35.54         9.96 
TCGA-09-1664 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 TCGA-09-1675 TCGA-09-2043 
       74.89        17.98         5.85         3.02        97.55         6.15 
TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2050 TCGA-09-2053 TCGA-09-2055 
        6.12        35.15         4.50        71.11        39.75        26.93 
TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0931 
       12.46        54.31        25.91        81.47        18.48        32.28 
TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 
        3.88        35.41        35.80        15.12        19.86         6.21 
TCGA-13-0720 TCGA-13-0723 TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 
       44.55        39.58        12.39        31.07        15.19        17.79 
TCGA-13-0751 TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 TCGA-13-0761 TCGA-13-0762 
       55.17         2.47        11.18        11.38        34.06        32.25 
TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 TCGA-13-0794 TCGA-13-0797 TCGA-13-0799 
       21.40         8.42        38.93        30.35         8.71         7.79 
TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 
        8.28         8.19        43.82        35.28        35.28        13.61 
TCGA-13-0883 TCGA-13-0884 TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 
       68.91       107.18        66.64        70.39        61.81        67.99 
TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 
       69.01        43.36        57.47        56.15        57.07        19.36 
TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 
       47.38        48.33        47.84        44.94        44.84        37.08 
TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0921 
       27.68        34.06        29.98        21.14        14.89         4.64 
TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1410 TCGA-13-1411 
        6.08        10.88         6.61         7.36         4.70         4.21 
TCGA-13-1412 TCGA-13-1477 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 
        5.33        54.61        61.71        29.39        98.04        20.68 
TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1497 TCGA-13-1498 
       52.44        73.55        38.17        49.22        54.31        37.61 
TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 
       13.97        32.84        16.57         4.21         4.41         4.77 
TCGA-13-1509 TCGA-13-1511 TCGA-13-1512 TCGA-13-2059 TCGA-13-2065 TCGA-13-2071 
        4.14         3.88         3.09        12.23         8.75         6.28 
TCGA-20-0987 TCGA-20-0996 TCGA-20-1683 TCGA-20-1684 TCGA-20-1687 TCGA-23-1021 
       23.05        72.20        25.38        19.07         2.66        47.54 
TCGA-23-1022 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 
       42.51        15.39        26.83        31.73        49.41         8.81 
TCGA-23-1030 TCGA-23-1032 TCGA-23-1111 TCGA-23-1113 TCGA-23-1117 TCGA-23-1118 
       29.10         2.24         3.22        31.20        33.30        86.01 
TCGA-23-1119 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-2072 TCGA-23-2078 
      129.96         6.38        39.09        33.47        24.95        87.48 
TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 
       77.00        49.84         2.76         4.70         4.50         7.63 
TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 TCGA-24-1103 
       19.63        11.64        21.80        41.56         7.66        54.08 
TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1418 TCGA-24-1419 
       63.55        47.41         6.31         6.38         7.99         7.86 
TCGA-24-1422 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 
        0.76         5.95         5.36         4.80        17.36        28.34 
TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 TCGA-24-1464 
       19.17        18.67        43.53         8.55        72.92        12.46 
TCGA-24-1466 TCGA-24-1467 TCGA-24-1470 TCGA-24-1471 TCGA-24-1544 TCGA-24-1545 
       45.14       105.99         3.42         1.18        26.96        57.37 
TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 
       64.27        16.21        56.58        41.06        51.91        41.39 
TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1560 TCGA-24-1562 
       58.09        88.50        70.62        39.88        44.09        45.50 
TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 
       10.26        17.23        90.15        38.24         8.32         3.48 
TCGA-24-1844 TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 TCGA-24-1920 
        3.72         3.81         4.37        11.28         5.75         9.80 
TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 TCGA-24-1930 TCGA-24-2019 
       22.65        30.21        16.41        11.05        81.11         4.87 
TCGA-24-2023 TCGA-24-2024 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 
       44.84        58.16       109.68        14.43        53.95        18.48 
TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2260 TCGA-24-2262 TCGA-24-2271 
       28.18        64.01        44.48        36.16         0.36        31.63 
TCGA-24-2280 TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 
       70.45         0.82        67.36        36.23        16.64        33.11 
TCGA-24-2297 TCGA-24-2298 TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 
       55.86        53.26         1.02        26.93        31.99        51.06 
TCGA-25-1316 TCGA-25-1318 TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 TCGA-25-1329 
       37.02        34.98        36.95        33.96         2.99         2.96 
TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 TCGA-25-1630 
       18.58        18.02        15.78         0.36        20.58         7.86 
TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1635 TCGA-25-2042 TCGA-25-2391 
        0.30        56.94        60.59        51.22        13.02        49.05 
TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 TCGA-25-2399 TCGA-25-2408 TCGA-25-2409 
       38.04         3.02        12.00        19.99        30.97        26.96 
TCGA-29-1688 TCGA-29-1690 TCGA-29-1693 TCGA-29-1694 TCGA-29-1696 TCGA-29-1697 
       78.87        44.71       101.75        38.53        33.70        31.17 
TCGA-29-1699 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1711 TCGA-29-1761 
        0.53        59.67        18.25        41.95        34.62        17.00 
TCGA-29-1762 TCGA-29-1763 TCGA-29-1766 TCGA-29-1768 TCGA-29-1771 TCGA-29-1775 
       85.68        66.77        39.09        31.23        22.52        12.36 
TCGA-29-1776 TCGA-29-1777 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 
       11.84        12.30         8.35         7.20         5.36        34.62 
TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 TCGA-29-2434 TCGA-29-2436 
       62.47        45.11         4.87        42.25        11.47         9.76 
TCGA-30-1714 TCGA-30-1853 TCGA-30-1855 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 
       38.07        36.26         2.47         0.26        48.07        44.91 
TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 
        6.08        36.62         1.18        57.57        24.26        30.05 
TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 TCGA-36-1568 
       48.79        45.57        30.18        18.77        22.45        28.73 
TCGA-36-1569 TCGA-36-1570 TCGA-36-1574 TCGA-36-1577 TCGA-36-1578 TCGA-36-2530 
       29.06        21.53        22.55        25.74        27.85        33.01 
TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2543 
       29.49        29.79        25.91        25.08        23.80         2.24 
TCGA-36-2544 TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 TCGA-42-2582 TCGA-42-2587 
       20.98        20.52        14.17         6.05        26.04        23.74 
TCGA-42-2588 TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-57-1583 TCGA-57-1584 
        9.44         7.56         7.46        22.39        11.38        21.14 
TCGA-57-1992 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 
       28.96       180.16        80.12        22.32       116.12         9.40 
TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 TCGA-61-1724 
       34.39         2.14         5.39        44.78        11.11        20.94 
TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 
       31.40        18.54        27.88        31.76        28.47        48.79 
TCGA-61-1738 TCGA-61-1740 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 
       35.80         2.43         1.41         8.42         5.79        11.41 
TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 
       13.02         9.07        34.13        37.02        42.48        48.92 
TCGA-61-1914 TCGA-61-1917 TCGA-61-1995 TCGA-61-2000 TCGA-61-2002 TCGA-61-2008 
       56.58        43.43         1.97        14.50        17.98        30.61 
TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2092 
       30.64         1.18        45.96        45.40         4.80        51.72 
TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2101 TCGA-61-2102 TCGA-61-2109 
       71.74        61.64        58.39        55.50         6.48        20.68 
TCGA-61-2110 TCGA-61-2613 
       44.52        31.07 

  6P GAIN MUTATED 6P GAIN WILD-TYPE 
             0.53              0.26 
  6P GAIN MUTATED 6P GAIN WILD-TYPE 
           151.99            180.16 
  6P GAIN MUTATED 6P GAIN WILD-TYPE 
           25.870            28.685 
[1] "0.5 - 152.0 (25.9)" "0.3 - 180.2 (28.7)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "6P GAIN MUTATED"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" "6P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"6P GAIN WILD-TYPE" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED"   "6P GAIN MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "6P GAIN MUTATED" "6P GAIN WILD-TYPE"   "6P GAIN MUTATED" 
[1] "hr=" "1.2"
D11V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  6P GAIN MUTATED         0   156                1
  6P GAIN WILD-TYPE       2   392                1
D11V3, multiclass
                  clus
vv                 6P GAIN MUTATED 6P GAIN WILD-TYPE
  OMENTUM                        0                 2
  OVARY                        156               392
  PERITONEUM OVARY               1                 1
D11V4, continuous
D11V5, binary
                   cls
clus                  0   1
  6P GAIN MUTATED     0 159
  6P GAIN WILD-TYPE   3 400
[1] "tbl2"
                   cls
clus                [,1] [,2]
  6P GAIN MUTATED      0  159
  6P GAIN WILD-TYPE    3  400
     clus
vv    6P GAIN MUTATED 6P GAIN WILD-TYPE
  NO                0                 3
  YES             159               400
                   vv
clus                R0 R1 R2
  6P GAIN MUTATED    4  8  1
  6P GAIN WILD-TYPE 10 18  1
D11V6, multiclass
    clus
vv   6P GAIN MUTATED 6P GAIN WILD-TYPE
  R0               4                10
  R1               8                18
  R2               1                 1

Clustering(12) Variable = 6Q GAIN MUTATION ANALYSIS
D12V1, survival
                   sevent
clus2                 0   1
  6Q GAIN MUTATED    48  41
  6Q GAIN WILD-TYPE 213 245
  6Q GAIN MUTATED 6Q GAIN WILD-TYPE 
               89               458 
  6Q GAIN MUTATED 6Q GAIN WILD-TYPE 
               41               245 
$`6Q GAIN MUTATED`
TCGA-04-1342 TCGA-04-1346 TCGA-04-1347 TCGA-04-1362 TCGA-04-1516 TCGA-04-1530 
       18.51        65.49        63.06        44.32        41.59       119.08 
TCGA-04-1536 TCGA-09-0364 TCGA-09-1665 TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 
       29.06        29.16        41.59        61.87        55.36        30.48 
TCGA-09-1674 TCGA-09-2051 TCGA-10-0930 TCGA-10-0933 TCGA-13-0723 TCGA-13-0724 
        8.55        63.09        33.24        11.70        39.58         2.73 
TCGA-13-0760 TCGA-13-0764 TCGA-13-0795 TCGA-13-0800 TCGA-13-0885 TCGA-13-0920 
       11.54        31.04        19.56         8.12        91.40        13.81 
TCGA-13-1408 TCGA-13-1409 TCGA-13-1487 TCGA-13-1488 TCGA-13-1496 TCGA-13-1499 
        5.92         6.84        22.39        70.82         4.24        38.37 
TCGA-13-2057 TCGA-13-2061 TCGA-20-0991 TCGA-20-1682 TCGA-23-1110 TCGA-23-1111 
       14.24        10.78        26.20        27.48        54.51         3.22 
TCGA-23-1114 TCGA-23-1116 TCGA-23-1120 TCGA-23-1124 TCGA-23-1809 TCGA-23-2077 
       68.68         4.57         4.27        58.13         0.53       115.89 
TCGA-23-2079 TCGA-24-1424 TCGA-24-1469 TCGA-24-1474 TCGA-24-1558 TCGA-24-1563 
       91.66         6.02         9.11        22.19        19.53        47.70 
TCGA-24-1604 TCGA-24-1614 TCGA-24-1850 TCGA-24-1928 TCGA-24-2267 TCGA-24-2281 
       88.34        48.33         5.49        11.05        47.54        44.58 
TCGA-25-1635 TCGA-25-1871 TCGA-25-1877 TCGA-25-2392 TCGA-25-2400 TCGA-25-2404 
       51.22        24.99        18.05         1.02        42.02        29.00 
TCGA-29-1691 TCGA-29-1695 TCGA-29-1698 TCGA-29-1702 TCGA-29-1710 TCGA-29-1764 
       47.18         0.79        68.28        18.64        29.23        62.93 
TCGA-29-1770 TCGA-29-1774 TCGA-29-1778 TCGA-29-2425 TCGA-30-1861 TCGA-30-1862 
       24.36        17.29        14.93        65.00        34.78         6.08 
TCGA-36-1575 TCGA-36-1576 TCGA-36-1581 TCGA-36-2551 TCGA-36-2552 TCGA-57-1582 
        8.55        30.05        24.69        16.14        11.47        24.03 
TCGA-57-1993 TCGA-57-1994 TCGA-61-1741 TCGA-61-1743 TCGA-61-1915 TCGA-61-1919 
       25.05        25.02        33.67        43.69        67.73        38.17 
TCGA-61-2003 TCGA-61-2088 TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 
        3.98         4.77       125.72        22.22         6.35 

$`6Q GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1343 TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 
       11.87        48.76        21.57        63.98        65.46        49.28 
TCGA-04-1361 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 
       32.52        33.67        76.54        71.47        82.36        56.55 
TCGA-04-1517 TCGA-04-1525 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 
       19.99        38.37        84.20        55.40        48.89        27.88 
TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 TCGA-04-1655 
       28.64        64.64        36.23        31.86        47.70        45.34 
TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 
        9.47        57.73        17.95        35.54         9.96        38.43 
TCGA-09-1662 TCGA-09-1664 TCGA-09-1666 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 
       89.33        74.89        57.57        17.98         5.85         3.02 
TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 
       97.55         6.15         6.12        35.15         4.50       112.37 
TCGA-09-2050 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 
       71.11        39.75        20.91        26.93        12.46        54.31 
TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0931 TCGA-10-0934 TCGA-10-0935 
       25.91        81.47        18.48        32.28         3.88        35.41 
TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 
       35.80        15.12        19.86         6.21        24.59        44.55 
TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 
       12.39        31.07        15.19        17.79        55.17         2.47 
TCGA-13-0757 TCGA-13-0758 TCGA-13-0761 TCGA-13-0762 TCGA-13-0766 TCGA-13-0768 
       11.18        11.38        34.06        32.25        21.40         8.42 
TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0797 TCGA-13-0799 
       38.93        36.72        28.70        30.35         8.71         7.79 
TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 
        8.28         8.19        43.82        35.28        35.28        13.61 
TCGA-13-0883 TCGA-13-0884 TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 
       68.91       107.18        74.27        66.64        70.39        61.81 
TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 
       67.99        69.01        43.36        57.47        56.15        57.07 
TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 
       19.36        47.38        48.33        47.84        44.94        44.84 
TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 
       37.08        27.68        34.06        29.98        21.14        14.89 
TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 
        4.64         6.41         6.08        10.88         6.61         7.36 
TCGA-13-1407 TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 
        6.05         4.70         4.21         5.33        54.61        87.06 
TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 TCGA-13-1489 TCGA-13-1491 
       61.71        29.39        98.04        20.68        82.88        52.44 
TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1497 TCGA-13-1498 TCGA-13-1500 
       73.55        38.17        49.22        54.31        37.61        13.97 
TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 
       32.84        16.57         4.21         4.41         4.77         4.14 
TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2059 TCGA-13-2060 TCGA-13-2065 
        2.56         3.88         3.09        12.23         8.58         8.75 
TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 TCGA-20-0996 TCGA-20-1683 TCGA-20-1684 
        6.28        23.05        25.94        72.20        25.38        19.07 
TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 TCGA-23-1022 TCGA-23-1023 
       16.67         2.93         2.66        47.54        42.51        40.54 
TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 
       15.39        26.83        31.73        49.41         8.81        29.10 
TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 TCGA-23-1113 TCGA-23-1117 TCGA-23-1118 
       18.87         2.24        51.35        31.20        33.30        86.01 
TCGA-23-1119 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-2072 TCGA-23-2078 
      129.96         6.38        39.09        33.47        24.95        87.48 
TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 
       77.00        49.84         2.76         4.70         4.50         7.63 
TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 
       19.63        11.64        21.80        41.56         7.66        22.32 
TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 
       54.08        63.55        47.41         6.31         6.38         7.82 
TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1425 TCGA-24-1426 
        7.99         7.86         0.76         6.25         5.95         5.36 
TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 
        4.80        17.36        28.34        19.17        18.67        43.53 
TCGA-24-1436 TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 TCGA-24-1470 
        8.55        72.92        12.46        45.14       105.99         3.42 
TCGA-24-1471 TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 
        1.18        26.96        57.37        64.27        16.21        56.58 
TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 
       41.06        51.91        41.39        58.09        88.50        70.62 
TCGA-24-1557 TCGA-24-1560 TCGA-24-1562 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 
       39.88        44.09        45.50        25.87        10.26        17.23 
TCGA-24-1603 TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 TCGA-24-1845 
       90.15        38.24         8.32         3.48         3.72         3.81 
TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 
        4.37        11.28         5.75         9.80        22.65        30.21 
TCGA-24-1927 TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 
       16.41        81.11         4.87       151.99        44.84        58.16 
TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 
       34.82       109.68        14.43        53.95        18.48        28.18 
TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 TCGA-24-2262 
       64.01        44.48        57.07        36.16         0.79         0.36 
TCGA-24-2271 TCGA-24-2280 TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 
       31.63        70.45         0.82        67.36        36.23        16.64 
TCGA-24-2295 TCGA-24-2297 TCGA-24-2298 TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 
       33.11        55.86        53.26         1.02        26.93        31.99 
TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 
       51.06        37.02         1.02        34.98        65.00        36.95 
TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 
       33.96         2.99        12.00         2.96        18.58        18.02 
TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 
       15.78         0.36        20.58         7.86         0.30        56.94 
TCGA-25-1633 TCGA-25-1634 TCGA-25-1870 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 
       60.59        35.54        14.93        85.05        13.02        49.05 
TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2401 
       38.04         3.02        12.00        45.01        19.99         2.96 
TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1693 TCGA-29-1694 
       30.97        26.96        78.87        44.71       101.75        38.53 
TCGA-29-1696 TCGA-29-1697 TCGA-29-1699 TCGA-29-1701 TCGA-29-1703 TCGA-29-1705 
       33.70        31.17         0.53        16.90        59.67        18.25 
TCGA-29-1707 TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 TCGA-29-1763 TCGA-29-1766 
       41.95        34.62        17.00        85.68        66.77        39.09 
TCGA-29-1768 TCGA-29-1769 TCGA-29-1771 TCGA-29-1775 TCGA-29-1776 TCGA-29-1777 
       31.23        22.98        22.52        12.36        11.84        12.30 
TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 TCGA-29-2427 
        8.35         7.20         5.36        34.62        86.17        62.47 
TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 
       45.11         4.87        42.25        11.84        11.47         9.76 
TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 
       38.07        51.91        36.26         2.47        15.68         0.26 
TCGA-30-1859 TCGA-30-1860 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 
       48.07        44.91        36.62         1.18        57.57        24.26 
TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 
       30.05        48.79        45.57        30.18        18.77        22.45 
TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1569 
        6.71        42.51        44.09         2.17        28.73        29.06 
TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 
       21.53        22.85        22.55        25.74        27.85        24.23 
TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 
       35.05        33.01        29.49        29.79        25.91        25.08 
TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 
       23.80        21.60         2.24        20.98        18.31        20.52 
TCGA-36-2548 TCGA-36-2549 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 TCGA-42-2589 
       14.17         6.05        26.04        23.74         9.44         7.56 
TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1583 TCGA-57-1584 TCGA-57-1585 
        7.46        22.39         1.48        11.38        21.14         1.74 
TCGA-57-1586 TCGA-57-1992 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 
       22.32        28.96       180.16        80.12        22.32       116.12 
TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 
        9.40        34.39         2.14         5.39        44.78        11.11 
TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 TCGA-61-1730 
        8.05        20.94        31.40        18.54        27.88         4.34 
TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 
       31.76        28.47        48.79        44.84        35.80         2.43 
TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 
        1.41         8.42         5.79        11.41        13.02         9.07 
TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 
       34.13        31.30        37.02        42.48        48.92        56.58 
TCGA-61-1917 TCGA-61-1918 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 
       43.43        15.75         1.97         5.52        14.50        17.98 
TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 
       30.61        39.85        30.64         1.18        45.96        45.40 
TCGA-61-2087 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 
        4.80        51.72        71.74        61.64        58.39        60.62 
TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 
       65.49        55.50         6.48        76.83        20.68        44.52 
TCGA-61-2613 TCGA-61-2614 
       31.07         8.58 

  6Q GAIN MUTATED 6Q GAIN WILD-TYPE 
             0.53              0.26 
  6Q GAIN MUTATED 6Q GAIN WILD-TYPE 
           125.72            180.16 
  6Q GAIN MUTATED 6Q GAIN WILD-TYPE 
           26.200            28.405 
[1] "0.5 - 125.7 (26.2)" "0.3 - 180.2 (28.4)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "6Q GAIN MUTATED"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE"   "6Q GAIN MUTATED"   "6Q GAIN MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "6Q GAIN MUTATED" "6Q GAIN WILD-TYPE" "6Q GAIN WILD-TYPE" 
[1] "hr=" "1.2"
D12V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  6Q GAIN MUTATED         0    90                0
  6Q GAIN WILD-TYPE       2   458                2
D12V3, multiclass
                  clus
vv                 6Q GAIN MUTATED 6Q GAIN WILD-TYPE
  OMENTUM                        0                 2
  OVARY                         90               458
  PERITONEUM OVARY               0                 2
D12V4, continuous
D12V5, binary
                   cls
clus                  0   1
  6Q GAIN MUTATED     0  92
  6Q GAIN WILD-TYPE   3 467
[1] "tbl2"
                   cls
clus                [,1] [,2]
  6Q GAIN MUTATED      0   92
  6Q GAIN WILD-TYPE    3  467
     clus
vv    6Q GAIN MUTATED 6Q GAIN WILD-TYPE
  NO                0                 3
  YES              92               467
                   vv
clus                R0 R1 R2
  6Q GAIN MUTATED    3  3  0
  6Q GAIN WILD-TYPE 11 23  2
D12V6, multiclass
    clus
vv   6Q GAIN MUTATED 6Q GAIN WILD-TYPE
  R0               3                11
  R1               3                23
  R2               0                 2

Clustering(13) Variable = 7P GAIN MUTATION ANALYSIS
D13V1, survival
                   sevent
clus2                 0   1
  7P GAIN MUTATED    80  90
  7P GAIN WILD-TYPE 181 196
  7P GAIN MUTATED 7P GAIN WILD-TYPE 
              170               377 
  7P GAIN MUTATED 7P GAIN WILD-TYPE 
               90               196 
$`7P GAIN MUTATED`
TCGA-04-1337 TCGA-04-1342 TCGA-04-1346 TCGA-04-1351 TCGA-04-1364 TCGA-04-1367 
        2.01        18.51        65.49        65.46        33.67        71.47 
TCGA-04-1514 TCGA-04-1517 TCGA-04-1542 TCGA-04-1644 TCGA-04-1646 TCGA-04-1649 
       56.55        19.99        84.20        48.89        27.88        64.64 
TCGA-04-1652 TCGA-09-0365 TCGA-09-0367 TCGA-09-1661 TCGA-09-1665 TCGA-09-1667 
       31.86         9.47        17.95        38.43        41.59        61.87 
TCGA-09-1670 TCGA-09-1672 TCGA-09-1674 TCGA-09-2043 TCGA-09-2045 TCGA-09-2049 
       17.98         5.85         8.55         6.15        35.15       112.37 
TCGA-09-2051 TCGA-09-2054 TCGA-10-0926 TCGA-13-0717 TCGA-13-0724 TCGA-13-0730 
       63.09        20.91        25.91        24.59         2.73        17.79 
TCGA-13-0757 TCGA-13-0760 TCGA-13-0762 TCGA-13-0768 TCGA-13-0795 TCGA-13-0803 
       11.18        11.54        32.25         8.42        19.56        43.82 
TCGA-13-0807 TCGA-13-0883 TCGA-13-0888 TCGA-13-0899 TCGA-13-0901 TCGA-13-0903 
       13.61        68.91        70.39        56.15        19.36        47.38 
TCGA-13-0904 TCGA-13-0912 TCGA-13-0921 TCGA-13-0923 TCGA-13-1407 TCGA-13-1408 
       48.33        34.06         4.64         6.41         6.05         5.92 
TCGA-13-1410 TCGA-13-1411 TCGA-13-1481 TCGA-13-1482 TCGA-13-1484 TCGA-13-1485 
        4.70         4.21        87.06        61.71        98.04        20.68 
TCGA-13-1488 TCGA-13-1489 TCGA-13-1495 TCGA-13-1496 TCGA-13-1500 TCGA-13-1504 
       70.82        82.88        49.22         4.24        13.97        16.57 
TCGA-13-1509 TCGA-13-2059 TCGA-13-2060 TCGA-20-0987 TCGA-20-0991 TCGA-20-1682 
        4.14        12.23         8.58        23.05        26.20        27.48 
TCGA-20-1686 TCGA-20-1687 TCGA-23-1024 TCGA-23-1032 TCGA-23-1111 TCGA-23-1116 
        2.93         2.66        15.39         2.24         3.22         4.57 
TCGA-23-1117 TCGA-23-1121 TCGA-23-1124 TCGA-23-1809 TCGA-23-2072 TCGA-23-2079 
       33.30         6.38        58.13         0.53        24.95        91.66 
TCGA-23-2081 TCGA-24-0980 TCGA-24-1418 TCGA-24-1424 TCGA-24-1428 TCGA-24-1431 
       77.00         7.66         7.99         6.02        17.36        19.17 
TCGA-24-1474 TCGA-24-1557 TCGA-24-1558 TCGA-24-1564 TCGA-24-1614 TCGA-24-1844 
       22.19        39.88        19.53        25.87        48.33         3.72 
TCGA-24-1845 TCGA-24-1928 TCGA-24-2019 TCGA-24-2020 TCGA-24-2026 TCGA-24-2030 
        3.81        11.05         4.87       151.99        34.82        53.95 
TCGA-24-2038 TCGA-24-2261 TCGA-24-2267 TCGA-24-2280 TCGA-24-2288 TCGA-24-2293 
       44.48         0.79        47.54        70.45         0.82        16.64 
TCGA-24-2295 TCGA-25-1312 TCGA-25-1313 TCGA-25-1318 TCGA-25-1320 TCGA-25-1323 
       33.11         1.02        26.93        34.98        36.95        12.00 
TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 TCGA-25-1870 TCGA-25-1871 TCGA-25-2397 
       15.78         0.36        20.58        14.93        24.99        12.00 
TCGA-25-2400 TCGA-29-1693 TCGA-29-1695 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 
       42.02       101.75         0.79        31.17        68.28         0.53 
TCGA-29-1707 TCGA-29-1710 TCGA-29-1763 TCGA-29-1764 TCGA-29-1775 TCGA-29-1778 
       41.95        29.23        66.77        62.93        12.36        14.93 
TCGA-29-1783 TCGA-29-2428 TCGA-29-2429 TCGA-29-2432 TCGA-29-2434 TCGA-30-1853 
        7.20        45.11         4.87        11.84        11.47        36.26 
TCGA-30-1856 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-31-1950 TCGA-31-1959 
       15.68         6.08        36.62         1.18        18.77         2.17 
TCGA-36-1580 TCGA-36-2543 TCGA-36-2547 TCGA-36-2548 TCGA-42-2582 TCGA-42-2587 
       24.23         2.24        20.52        14.17        26.04        23.74 
TCGA-57-1993 TCGA-59-2348 TCGA-59-2349 TCGA-59-2351 TCGA-59-2355 TCGA-59-2372 
       25.05       180.16        80.12       116.12         2.14        44.78 
TCGA-61-1730 TCGA-61-1734 TCGA-61-1737 TCGA-61-1743 TCGA-61-1899 TCGA-61-1904 
        4.34        28.47        44.84        43.69         8.42         9.07 
TCGA-61-1907 TCGA-61-1911 TCGA-61-1914 TCGA-61-1918 TCGA-61-1919 TCGA-61-2003 
       31.30        42.48        56.58        15.75        38.17         3.98 
TCGA-61-2088 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2110 
        4.77        65.49        55.50         6.48        76.83        44.52 
TCGA-61-2113 TCGA-61-2614 
       22.22         8.58 

$`7P GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1338 TCGA-04-1343 
       40.24        41.00         1.81        49.15        46.62        11.87 
TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 TCGA-04-1356 TCGA-04-1361 
       63.06        48.76        21.57        63.98        49.28        32.52 
TCGA-04-1362 TCGA-04-1365 TCGA-04-1371 TCGA-04-1516 TCGA-04-1525 TCGA-04-1530 
       44.32        76.54        82.36        41.59        38.37       119.08 
TCGA-04-1536 TCGA-04-1638 TCGA-04-1648 TCGA-04-1651 TCGA-04-1654 TCGA-04-1655 
       29.06        55.40        28.64        36.23        47.70        45.34 
TCGA-09-0364 TCGA-09-0366 TCGA-09-0369 TCGA-09-1659 TCGA-09-1662 TCGA-09-1664 
       29.16        57.73        35.54         9.96        89.33        74.89 
TCGA-09-1666 TCGA-09-1668 TCGA-09-1669 TCGA-09-1673 TCGA-09-1675 TCGA-09-2044 
       57.57        55.36        30.48         3.02        97.55         6.12 
TCGA-09-2048 TCGA-09-2050 TCGA-09-2053 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 
        4.50        71.11        39.75        26.93        12.46        54.31 
TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 
       81.47        18.48        33.24        32.28        11.70         3.88 
TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 TCGA-13-0720 
       35.41        35.80        15.12        19.86         6.21        44.55 
TCGA-13-0723 TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0751 TCGA-13-0755 
       39.58        12.39        31.07        15.19        55.17         2.47 
TCGA-13-0758 TCGA-13-0761 TCGA-13-0764 TCGA-13-0766 TCGA-13-0791 TCGA-13-0792 
       11.38        34.06        31.04        21.40        38.93        36.72 
TCGA-13-0793 TCGA-13-0794 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 
       28.70        30.35         8.71         7.79         8.12         8.28 
TCGA-13-0802 TCGA-13-0804 TCGA-13-0805 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 
        8.19        35.28        35.28       107.18        91.40        74.27 
TCGA-13-0887 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 
       66.64        61.81        67.99        69.01        43.36        57.47 
TCGA-13-0900 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 
       57.07        47.84        44.94        44.84        37.08        27.68 
TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 TCGA-13-0924 TCGA-13-1403 
       29.98        21.14        14.89        13.81         6.08        10.88 
TCGA-13-1404 TCGA-13-1405 TCGA-13-1409 TCGA-13-1412 TCGA-13-1477 TCGA-13-1483 
        6.61         7.36         6.84         5.33        54.61        29.39 
TCGA-13-1487 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1497 TCGA-13-1498 
       22.39        52.44        73.55        38.17        54.31        37.61 
TCGA-13-1499 TCGA-13-1501 TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-1510 
       38.37        32.84         4.21         4.41         4.77         2.56 
TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 
        3.88         3.09        14.24        10.78         8.75         6.28 
TCGA-20-0990 TCGA-20-0996 TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-23-1021 
       25.94        72.20        25.38        19.07        16.67        47.54 
TCGA-23-1022 TCGA-23-1023 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 
       42.51        40.54        26.83        31.73        49.41         8.81 
TCGA-23-1030 TCGA-23-1031 TCGA-23-1109 TCGA-23-1110 TCGA-23-1113 TCGA-23-1114 
       29.10        18.87        51.35        54.51        31.20        68.68 
TCGA-23-1118 TCGA-23-1119 TCGA-23-1120 TCGA-23-1122 TCGA-23-1123 TCGA-23-2077 
       86.01       129.96         4.27        39.09        33.47       115.89 
TCGA-23-2078 TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 
       87.48        49.84         2.76         4.70         4.50         7.63 
TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 TCGA-24-0982 TCGA-24-1103 
       19.63        11.64        21.80        41.56        22.32        54.08 
TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 TCGA-24-1419 
       63.55        47.41         6.31         6.38         7.82         7.86 
TCGA-24-1422 TCGA-24-1423 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1430 
        0.76         6.25         5.95         5.36         4.80        28.34 
TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 
       18.67        43.53         8.55        72.92        12.46        45.14 
TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 TCGA-24-1544 TCGA-24-1545 
      105.99         9.11         3.42         1.18        26.96        57.37 
TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 
       64.27        16.21        56.58        41.06        51.91        41.39 
TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 
       58.09        88.50        70.62        44.09        45.50        47.70 
TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 TCGA-24-1616 TCGA-24-1842 
       10.26        17.23        90.15        88.34        38.24         8.32 
TCGA-24-1843 TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 
        3.48         4.37        11.28         5.75         5.49         9.80 
TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-1930 TCGA-24-2023 TCGA-24-2024 
       22.65        30.21        16.41        81.11        44.84        58.16 
TCGA-24-2027 TCGA-24-2029 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2254 
      109.68        14.43        18.48        28.18        64.01        57.07 
TCGA-24-2260 TCGA-24-2262 TCGA-24-2271 TCGA-24-2281 TCGA-24-2289 TCGA-24-2290 
       36.16         0.36        31.63        44.58        67.36        36.23 
TCGA-24-2297 TCGA-24-2298 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 
       55.86        53.26        31.99        51.06        37.02         1.02 
TCGA-25-1319 TCGA-25-1321 TCGA-25-1322 TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 
       65.00        33.96         2.99         2.96        18.58        18.02 
TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 TCGA-25-1635 
        7.86         0.30        56.94        60.59        35.54        51.22 
TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 
       18.05        85.05        13.02        49.05         1.02        38.04 
TCGA-25-2396 TCGA-25-2398 TCGA-25-2399 TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 
        3.02        45.01        19.99         2.96        29.00        30.97 
TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 TCGA-29-1694 TCGA-29-1696 
       26.96        78.87        44.71        47.18        38.53        33.70 
TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1711 TCGA-29-1761 
       16.90        18.64        59.67        18.25        34.62        17.00 
TCGA-29-1762 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 
       85.68        39.09        31.23        22.98        24.36        22.52 
TCGA-29-1774 TCGA-29-1776 TCGA-29-1777 TCGA-29-1781 TCGA-29-1784 TCGA-29-1785 
       17.29        11.84        12.30         8.35         5.36        34.62 
TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2431 TCGA-29-2436 TCGA-30-1714 
       86.17        65.00        62.47        42.25         9.76        38.07 
TCGA-30-1718 TCGA-30-1855 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 TCGA-30-1861 
       51.91         2.47         0.26        48.07        44.91        34.78 
TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 
       57.57        24.26        30.05        48.79        45.57        30.18 
TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-36-1568 TCGA-36-1569 
       22.45         6.71        42.51        44.09        28.73        29.06 
TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 
       21.53        22.85        22.55         8.55        30.05        25.74 
TCGA-36-1578 TCGA-36-1581 TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 
       27.85        24.69        35.05        33.01        29.49        29.79 
TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2544 TCGA-36-2545 
       25.91        25.08        23.80        21.60        20.98        18.31 
TCGA-36-2549 TCGA-36-2551 TCGA-36-2552 TCGA-42-2588 TCGA-42-2589 TCGA-42-2590 
        6.05        16.14        11.47         9.44         7.56         7.46 
TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 TCGA-57-1585 
       22.39         1.48        24.03        11.38        21.14         1.74 
TCGA-57-1586 TCGA-57-1992 TCGA-57-1994 TCGA-59-2350 TCGA-59-2352 TCGA-59-2354 
       22.32        28.96        25.02        22.32         9.40        34.39 
TCGA-59-2363 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 
        5.39        11.11         8.05        20.94        31.40        18.54 
TCGA-61-1728 TCGA-61-1733 TCGA-61-1736 TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 
       27.88        31.76        48.79        35.80         2.43        33.67 
TCGA-61-1895 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1906 TCGA-61-1910 
        1.41         5.79        11.41        13.02        34.13        37.02 
TCGA-61-1913 TCGA-61-1915 TCGA-61-1917 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 
       48.92        67.73        43.43         1.97         5.52        14.50 
TCGA-61-2002 TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 
       17.98        30.61        39.85        30.64         1.18        45.96 
TCGA-61-2018 TCGA-61-2087 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 
       45.40         4.80        51.72        71.74        61.64        58.39 
TCGA-61-2097 TCGA-61-2109 TCGA-61-2111 TCGA-61-2612 TCGA-61-2613 
       60.62        20.68       125.72         6.35        31.07 

  7P GAIN MUTATED 7P GAIN WILD-TYPE 
             0.36              0.26 
  7P GAIN MUTATED 7P GAIN WILD-TYPE 
           180.16            129.96 
  7P GAIN MUTATED 7P GAIN WILD-TYPE 
           22.205            30.050 
[1] "0.4 - 180.2 (22.2)" "0.3 - 130.0 (30.1)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "7P GAIN MUTATED"   "7P GAIN MUTATED"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "7P GAIN MUTATED"   "7P GAIN MUTATED"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "7P GAIN MUTATED"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "7P GAIN MUTATED"   "7P GAIN MUTATED"   "7P GAIN MUTATED"   "7P GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"7P GAIN WILD-TYPE"   "7P GAIN MUTATED" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"7P GAIN WILD-TYPE" "7P GAIN WILD-TYPE"   "7P GAIN MUTATED" 
[1] "hr=" "1.1"
D13V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  7P GAIN MUTATED         1   170                0
  7P GAIN WILD-TYPE       1   378                2
D13V3, multiclass
                  clus
vv                 7P GAIN MUTATED 7P GAIN WILD-TYPE
  OMENTUM                        1                 1
  OVARY                        170               378
  PERITONEUM OVARY               0                 2
D13V4, continuous
D13V5, binary
                   cls
clus                  0   1
  7P GAIN MUTATED     0 174
  7P GAIN WILD-TYPE   3 385
[1] "tbl2"
                   cls
clus                [,1] [,2]
  7P GAIN MUTATED      0  174
  7P GAIN WILD-TYPE    3  385
     clus
vv    7P GAIN MUTATED 7P GAIN WILD-TYPE
  NO                0                 3
  YES             174               385
                   vv
clus                R0 R1 R2
  7P GAIN MUTATED    5  9  0
  7P GAIN WILD-TYPE  9 17  2
D13V6, multiclass
    clus
vv   7P GAIN MUTATED 7P GAIN WILD-TYPE
  R0               5                 9
  R1               9                17
  R2               0                 2

Clustering(14) Variable = 7Q GAIN MUTATION ANALYSIS
D14V1, survival
                   sevent
clus2                 0   1
  7Q GAIN MUTATED    83 102
  7Q GAIN WILD-TYPE 178 184
  7Q GAIN MUTATED 7Q GAIN WILD-TYPE 
              185               362 
  7Q GAIN MUTATED 7Q GAIN WILD-TYPE 
              102               184 
$`7Q GAIN MUTATED`
TCGA-04-1337 TCGA-04-1342 TCGA-04-1347 TCGA-04-1351 TCGA-04-1364 TCGA-04-1514 
        2.01        18.51        63.06        65.46        33.67        56.55 
TCGA-04-1516 TCGA-04-1517 TCGA-04-1536 TCGA-04-1542 TCGA-04-1644 TCGA-04-1646 
       41.59        19.99        29.06        84.20        48.89        27.88 
TCGA-04-1649 TCGA-04-1652 TCGA-04-1655 TCGA-09-0365 TCGA-09-0367 TCGA-09-1661 
       64.64        31.86        45.34         9.47        17.95        38.43 
TCGA-09-1665 TCGA-09-1667 TCGA-09-1670 TCGA-09-1672 TCGA-09-1674 TCGA-09-2043 
       41.59        61.87        17.98         5.85         8.55         6.15 
TCGA-09-2045 TCGA-09-2051 TCGA-10-0926 TCGA-10-0927 TCGA-13-0717 TCGA-13-0724 
       35.15        63.09        25.91        81.47        24.59         2.73 
TCGA-13-0757 TCGA-13-0760 TCGA-13-0762 TCGA-13-0768 TCGA-13-0795 TCGA-13-0803 
       11.18        11.54        32.25         8.42        19.56        43.82 
TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0885 TCGA-13-0888 TCGA-13-0899 
       35.28        13.61        68.91        91.40        70.39        56.15 
TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0912 TCGA-13-0921 TCGA-13-0923 
       19.36        47.38        48.33        34.06         4.64         6.41 
TCGA-13-1407 TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 TCGA-13-1481 TCGA-13-1482 
        6.05         4.70         4.21         5.33        87.06        61.71 
TCGA-13-1484 TCGA-13-1485 TCGA-13-1488 TCGA-13-1489 TCGA-13-1495 TCGA-13-1496 
       98.04        20.68        70.82        82.88        49.22         4.24 
TCGA-13-1497 TCGA-13-1500 TCGA-13-1504 TCGA-13-1509 TCGA-13-2059 TCGA-13-2060 
       54.31        13.97        16.57         4.14        12.23         8.58 
TCGA-20-0987 TCGA-20-0991 TCGA-20-1682 TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 
       23.05        26.20        27.48         2.93         2.66        47.54 
TCGA-23-1024 TCGA-23-1031 TCGA-23-1032 TCGA-23-1111 TCGA-23-1119 TCGA-23-1121 
       15.39        18.87         2.24         3.22       129.96         6.38 
TCGA-23-1122 TCGA-23-1809 TCGA-23-2072 TCGA-23-2079 TCGA-23-2081 TCGA-24-1104 
       39.09         0.53        24.95        91.66        77.00        63.55 
TCGA-24-1418 TCGA-24-1424 TCGA-24-1428 TCGA-24-1431 TCGA-24-1436 TCGA-24-1474 
        7.99         6.02        17.36        19.17         8.55        22.19 
TCGA-24-1546 TCGA-24-1548 TCGA-24-1557 TCGA-24-1558 TCGA-24-1614 TCGA-24-1844 
       64.27        16.21        39.88        19.53        48.33         3.72 
TCGA-24-1845 TCGA-24-1850 TCGA-24-1928 TCGA-24-2019 TCGA-24-2020 TCGA-24-2026 
        3.81         5.49        11.05         4.87       151.99        34.82 
TCGA-24-2030 TCGA-24-2033 TCGA-24-2038 TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 
       53.95        18.48        44.48         0.79         0.36        47.54 
TCGA-24-2280 TCGA-24-2293 TCGA-24-2295 TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 
       70.45        16.64        33.11         1.02        26.93        31.99 
TCGA-25-1318 TCGA-25-1320 TCGA-25-1323 TCGA-25-1623 TCGA-25-1626 TCGA-25-1627 
       34.98        36.95        12.00        18.58        15.78         0.36 
TCGA-25-1628 TCGA-25-1870 TCGA-25-1871 TCGA-25-1878 TCGA-25-2397 TCGA-25-2400 
       20.58        14.93        24.99        85.05        12.00        42.02 
TCGA-25-2401 TCGA-29-1695 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1707 
        2.96         0.79        31.17        68.28         0.53        41.95 
TCGA-29-1764 TCGA-29-1775 TCGA-29-1778 TCGA-29-1783 TCGA-29-2428 TCGA-29-2429 
       62.93        12.36        14.93         7.20        45.11         4.87 
TCGA-29-2432 TCGA-29-2434 TCGA-30-1853 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 
       11.84        11.47        36.26         6.08        36.62         1.18 
TCGA-31-1944 TCGA-31-1950 TCGA-36-1580 TCGA-36-2529 TCGA-36-2543 TCGA-36-2545 
       45.57        18.77        24.23        35.05         2.24        18.31 
TCGA-36-2547 TCGA-36-2548 TCGA-42-2582 TCGA-42-2587 TCGA-42-2590 TCGA-57-1586 
       20.52        14.17        26.04        23.74         7.46        22.32 
TCGA-57-1993 TCGA-59-2348 TCGA-59-2349 TCGA-59-2351 TCGA-59-2355 TCGA-59-2372 
       25.05       180.16        80.12       116.12         2.14        44.78 
TCGA-61-1725 TCGA-61-1730 TCGA-61-1734 TCGA-61-1737 TCGA-61-1740 TCGA-61-1743 
       31.40         4.34        28.47        44.84         2.43        43.69 
TCGA-61-1899 TCGA-61-1901 TCGA-61-1904 TCGA-61-1906 TCGA-61-1911 TCGA-61-1914 
        8.42        11.41         9.07        34.13        42.48        56.58 
TCGA-61-1918 TCGA-61-1919 TCGA-61-2003 TCGA-61-2088 TCGA-61-2098 TCGA-61-2101 
       15.75        38.17         3.98         4.77        65.49        55.50 
TCGA-61-2102 TCGA-61-2104 TCGA-61-2110 TCGA-61-2113 TCGA-61-2614 
        6.48        76.83        44.52        22.22         8.58 

$`7Q GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1338 TCGA-04-1343 
       40.24        41.00         1.81        49.15        46.62        11.87 
TCGA-04-1346 TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 TCGA-04-1356 TCGA-04-1361 
       65.49        48.76        21.57        63.98        49.28        32.52 
TCGA-04-1362 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1525 TCGA-04-1530 
       44.32        76.54        71.47        82.36        38.37       119.08 
TCGA-04-1638 TCGA-04-1648 TCGA-04-1651 TCGA-04-1654 TCGA-09-0364 TCGA-09-0366 
       55.40        28.64        36.23        47.70        29.16        57.73 
TCGA-09-0369 TCGA-09-1659 TCGA-09-1662 TCGA-09-1664 TCGA-09-1666 TCGA-09-1668 
       35.54         9.96        89.33        74.89        57.57        55.36 
TCGA-09-1669 TCGA-09-1673 TCGA-09-1675 TCGA-09-2044 TCGA-09-2048 TCGA-09-2049 
       30.48         3.02        97.55         6.12         4.50       112.37 
TCGA-09-2050 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 
       71.11        39.75        20.91        26.93        12.46        54.31 
TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 
       18.48        33.24        32.28        11.70         3.88        35.41 
TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 TCGA-13-0720 TCGA-13-0723 
       35.80        15.12        19.86         6.21        44.55        39.58 
TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 
       12.39        31.07        15.19        17.79        55.17         2.47 
TCGA-13-0758 TCGA-13-0761 TCGA-13-0764 TCGA-13-0766 TCGA-13-0791 TCGA-13-0792 
       11.38        34.06        31.04        21.40        38.93        36.72 
TCGA-13-0793 TCGA-13-0794 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 
       28.70        30.35         8.71         7.79         8.12         8.28 
TCGA-13-0802 TCGA-13-0804 TCGA-13-0884 TCGA-13-0886 TCGA-13-0887 TCGA-13-0889 
        8.19        35.28       107.18        74.27        66.64        61.81 
TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 TCGA-13-0900 TCGA-13-0905 
       67.99        69.01        43.36        57.47        57.07        47.84 
TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0913 TCGA-13-0916 
       44.94        44.84        37.08        27.68        29.98        21.14 
TCGA-13-0919 TCGA-13-0920 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 
       14.89        13.81         6.08        10.88         6.61         7.36 
TCGA-13-1408 TCGA-13-1409 TCGA-13-1477 TCGA-13-1483 TCGA-13-1487 TCGA-13-1491 
        5.92         6.84        54.61        29.39        22.39        52.44 
TCGA-13-1492 TCGA-13-1494 TCGA-13-1498 TCGA-13-1499 TCGA-13-1501 TCGA-13-1505 
       73.55        38.17        37.61        38.37        32.84         4.21 
TCGA-13-1506 TCGA-13-1507 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 
        4.41         4.77         2.56         3.88         3.09        14.24 
TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0990 TCGA-20-0996 TCGA-20-1683 
       10.78         8.75         6.28        25.94        72.20        25.38 
TCGA-20-1684 TCGA-20-1685 TCGA-23-1022 TCGA-23-1023 TCGA-23-1026 TCGA-23-1027 
       19.07        16.67        42.51        40.54        26.83        31.73 
TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 TCGA-23-1109 TCGA-23-1110 TCGA-23-1113 
       49.41         8.81        29.10        51.35        54.51        31.20 
TCGA-23-1114 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1120 TCGA-23-1123 
       68.68         4.57        33.30        86.01         4.27        33.47 
TCGA-23-1124 TCGA-23-2077 TCGA-23-2078 TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 
       58.13       115.89        87.48        49.84         2.76         4.70 
TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 
        4.50         7.63        19.63        11.64        21.80        41.56 
TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 
        7.66        22.32        54.08        47.41         6.31         6.38 
TCGA-24-1417 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1425 TCGA-24-1426 
        7.82         7.86         0.76         6.25         5.95         5.36 
TCGA-24-1427 TCGA-24-1430 TCGA-24-1434 TCGA-24-1435 TCGA-24-1463 TCGA-24-1464 
        4.80        28.34        18.67        43.53        72.92        12.46 
TCGA-24-1466 TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 TCGA-24-1544 
       45.14       105.99         9.11         3.42         1.18        26.96 
TCGA-24-1545 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 
       57.37        56.58        41.06        51.91        41.39        58.09 
TCGA-24-1555 TCGA-24-1556 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 
       88.50        70.62        44.09        45.50        47.70        25.87 
TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 TCGA-24-1616 TCGA-24-1842 
       10.26        17.23        90.15        88.34        38.24         8.32 
TCGA-24-1843 TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 TCGA-24-1920 TCGA-24-1923 
        3.48         4.37        11.28         5.75         9.80        22.65 
TCGA-24-1924 TCGA-24-1927 TCGA-24-1930 TCGA-24-2023 TCGA-24-2024 TCGA-24-2027 
       30.21        16.41        81.11        44.84        58.16       109.68 
TCGA-24-2029 TCGA-24-2035 TCGA-24-2036 TCGA-24-2254 TCGA-24-2260 TCGA-24-2271 
       14.43        28.18        64.01        57.07        36.16        31.63 
TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2297 TCGA-24-2298 
       44.58         0.82        67.36        36.23        55.86        53.26 
TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 TCGA-25-1319 TCGA-25-1321 TCGA-25-1322 
       51.06        37.02         1.02        65.00        33.96         2.99 
TCGA-25-1329 TCGA-25-1625 TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 
        2.96        18.02         7.86         0.30        56.94        60.59 
TCGA-25-1634 TCGA-25-1635 TCGA-25-1877 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 
       35.54        51.22        18.05        13.02        49.05         1.02 
TCGA-25-2393 TCGA-25-2396 TCGA-25-2398 TCGA-25-2399 TCGA-25-2404 TCGA-25-2408 
       38.04         3.02        45.01        19.99        29.00        30.97 
TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 TCGA-29-1693 TCGA-29-1694 
       26.96        78.87        44.71        47.18       101.75        38.53 
TCGA-29-1696 TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1710 
       33.70        16.90        18.64        59.67        18.25        29.23 
TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 TCGA-29-1763 TCGA-29-1766 TCGA-29-1768 
       34.62        17.00        85.68        66.77        39.09        31.23 
TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 TCGA-29-1776 TCGA-29-1777 
       22.98        24.36        22.52        17.29        11.84        12.30 
TCGA-29-1781 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 
        8.35         5.36        34.62        86.17        65.00        62.47 
TCGA-29-2431 TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 TCGA-30-1855 TCGA-30-1856 
       42.25         9.76        38.07        51.91         2.47        15.68 
TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 TCGA-30-1861 TCGA-30-1880 TCGA-30-1887 
        0.26        48.07        44.91        34.78        57.57        24.26 
TCGA-30-1891 TCGA-30-1892 TCGA-31-1946 TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 
       30.05        48.79        30.18        22.45         6.71        42.51 
TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 
       44.09         2.17        28.73        29.06        21.53        22.85 
TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 TCGA-36-1581 
       22.55         8.55        30.05        25.74        27.85        24.69 
TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 
       33.01        29.49        29.79        25.91        25.08        23.80 
TCGA-36-2542 TCGA-36-2544 TCGA-36-2549 TCGA-36-2551 TCGA-36-2552 TCGA-42-2588 
       21.60        20.98         6.05        16.14        11.47         9.44 
TCGA-42-2589 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 
        7.56        22.39         1.48        24.03        11.38        21.14 
TCGA-57-1585 TCGA-57-1992 TCGA-57-1994 TCGA-59-2350 TCGA-59-2352 TCGA-59-2354 
        1.74        28.96        25.02        22.32         9.40        34.39 
TCGA-59-2363 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 TCGA-61-1727 TCGA-61-1728 
        5.39        11.11         8.05        20.94        18.54        27.88 
TCGA-61-1733 TCGA-61-1736 TCGA-61-1738 TCGA-61-1741 TCGA-61-1895 TCGA-61-1900 
       31.76        48.79        35.80        33.67         1.41         5.79 
TCGA-61-1903 TCGA-61-1907 TCGA-61-1910 TCGA-61-1913 TCGA-61-1915 TCGA-61-1917 
       13.02        31.30        37.02        48.92        67.73        43.43 
TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2008 TCGA-61-2009 
        1.97         5.52        14.50        17.98        30.61        39.85 
TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2092 
       30.64         1.18        45.96        45.40         4.80        51.72 
TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 TCGA-61-2109 TCGA-61-2111 
       71.74        61.64        58.39        60.62        20.68       125.72 
TCGA-61-2612 TCGA-61-2613 
        6.35        31.07 

  7Q GAIN MUTATED 7Q GAIN WILD-TYPE 
             0.36              0.26 
  7Q GAIN MUTATED 7Q GAIN WILD-TYPE 
           180.16            125.72 
  7Q GAIN MUTATED 7Q GAIN WILD-TYPE 
            23.05             29.64 
[1] "0.4 - 180.2 (23.1)" "0.3 - 125.7 (29.6)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "7Q GAIN MUTATED"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED"   "7Q GAIN MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"7Q GAIN WILD-TYPE" "7Q GAIN WILD-TYPE"   "7Q GAIN MUTATED" 
[1] "hr=" "1.1"
D14V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  7Q GAIN MUTATED         1   187                1
  7Q GAIN WILD-TYPE       1   361                1
D14V3, multiclass
                  clus
vv                 7Q GAIN MUTATED 7Q GAIN WILD-TYPE
  OMENTUM                        1                 1
  OVARY                        187               361
  PERITONEUM OVARY               1                 1
D14V4, continuous
D14V5, binary
                   cls
clus                  0   1
  7Q GAIN MUTATED     0 193
  7Q GAIN WILD-TYPE   3 366
[1] "tbl2"
                   cls
clus                [,1] [,2]
  7Q GAIN MUTATED      0  193
  7Q GAIN WILD-TYPE    3  366
     clus
vv    7Q GAIN MUTATED 7Q GAIN WILD-TYPE
  NO                0                 3
  YES             193               366
                   vv
clus                R0 R1 R2
  7Q GAIN MUTATED    7 12  0
  7Q GAIN WILD-TYPE  7 14  2
D14V6, multiclass
    clus
vv   7Q GAIN MUTATED 7Q GAIN WILD-TYPE
  R0               7                 7
  R1              12                14
  R2               0                 2

Clustering(15) Variable = 8P GAIN MUTATION ANALYSIS
D15V1, survival
                   sevent
clus2                 0   1
  8P GAIN MUTATED    51  66
  8P GAIN WILD-TYPE 210 220
  8P GAIN MUTATED 8P GAIN WILD-TYPE 
              117               430 
  8P GAIN MUTATED 8P GAIN WILD-TYPE 
               66               220 
$`8P GAIN MUTATED`
TCGA-04-1342 TCGA-04-1343 TCGA-04-1347 TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 
       18.51        11.87        63.06        63.98        65.46        49.28 
TCGA-04-1362 TCGA-04-1364 TCGA-04-1542 TCGA-09-0365 TCGA-09-0369 TCGA-09-1659 
       44.32        33.67        84.20         9.47        35.54         9.96 
TCGA-09-1665 TCGA-09-1667 TCGA-09-1672 TCGA-09-2043 TCGA-10-0935 TCGA-10-0937 
       41.59        61.87         5.85         6.15        35.41        15.12 
TCGA-13-0717 TCGA-13-0724 TCGA-13-0726 TCGA-13-0751 TCGA-13-0755 TCGA-13-0760 
       24.59         2.73        31.07        55.17         2.47        11.54 
TCGA-13-0768 TCGA-13-0794 TCGA-13-0800 TCGA-13-0884 TCGA-13-0893 TCGA-13-0897 
        8.42        30.35         8.12       107.18        43.36        57.47 
TCGA-13-0903 TCGA-13-0908 TCGA-13-0911 TCGA-13-1404 TCGA-13-1408 TCGA-13-1409 
       47.38        44.84        27.68         6.61         5.92         6.84 
TCGA-13-1484 TCGA-13-1485 TCGA-13-1488 TCGA-13-1497 TCGA-13-1506 TCGA-13-2057 
       98.04        20.68        70.82        54.31         4.41        14.24 
TCGA-13-2060 TCGA-13-2071 TCGA-20-0987 TCGA-20-1683 TCGA-20-1685 TCGA-20-1687 
        8.58         6.28        23.05        25.38        16.67         2.66 
TCGA-23-1023 TCGA-23-1029 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 TCGA-23-1119 
       40.54         8.81        51.35        54.51         3.22       129.96 
TCGA-23-2079 TCGA-24-0979 TCGA-24-1103 TCGA-24-1418 TCGA-24-1435 TCGA-24-1545 
       91.66        41.56        54.08         7.99        43.53        57.37 
TCGA-24-1553 TCGA-24-1556 TCGA-24-1557 TCGA-24-1563 TCGA-24-1847 TCGA-24-1849 
       58.09        70.62        39.88        47.70        11.28         5.75 
TCGA-24-1923 TCGA-24-2019 TCGA-24-2020 TCGA-24-2271 TCGA-25-1312 TCGA-25-1317 
       22.65         4.87       151.99        31.63         1.02         1.02 
TCGA-25-1320 TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 TCGA-25-1628 TCGA-25-1632 
       36.95         2.96        18.58        18.02        20.58        56.94 
TCGA-25-1877 TCGA-25-2392 TCGA-25-2398 TCGA-25-2401 TCGA-29-1690 TCGA-29-1691 
       18.05         1.02        45.01         2.96        44.71        47.18 
TCGA-29-1693 TCGA-29-1696 TCGA-29-1702 TCGA-29-1763 TCGA-29-1764 TCGA-29-1776 
      101.75        33.70        18.64        66.77        62.93        11.84 
TCGA-29-1785 TCGA-29-2431 TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 TCGA-30-1861 
       34.62        42.25        38.07        51.91        36.26        34.78 
TCGA-30-1892 TCGA-31-1946 TCGA-31-1956 TCGA-31-1959 TCGA-36-1576 TCGA-36-2529 
       48.79        30.18        44.09         2.17        30.05        35.05 
TCGA-36-2548 TCGA-36-2551 TCGA-42-2582 TCGA-57-1582 TCGA-59-2354 TCGA-59-2355 
       14.17        16.14        26.04        24.03        34.39         2.14 
TCGA-61-1743 TCGA-61-1899 TCGA-61-1906 TCGA-61-1918 TCGA-61-2003 TCGA-61-2009 
       43.69         8.42        34.13        15.75         3.98        39.85 
TCGA-61-2111 TCGA-61-2612 TCGA-61-2614 
      125.72         6.35         8.58 

$`8P GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1346 TCGA-04-1348 TCGA-04-1349 TCGA-04-1361 TCGA-04-1365 TCGA-04-1367 
       65.49        48.76        21.57        32.52        76.54        71.47 
TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 TCGA-04-1530 
       82.36        56.55        41.59        19.99        38.37       119.08 
TCGA-04-1536 TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 
       29.06        55.40        48.89        27.88        28.64        64.64 
TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 TCGA-04-1655 TCGA-09-0364 TCGA-09-0366 
       36.23        31.86        47.70        45.34        29.16        57.73 
TCGA-09-0367 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1666 TCGA-09-1668 
       17.95        38.43        89.33        74.89        57.57        55.36 
TCGA-09-1669 TCGA-09-1670 TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 TCGA-09-2044 
       30.48        17.98         3.02         8.55        97.55         6.12 
TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 
       35.15         4.50       112.37        71.11        63.09        39.75 
TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 
       20.91        26.93        12.46        54.31        25.91        81.47 
TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0936 
       18.48        33.24        32.28        11.70         3.88        35.80 
TCGA-10-0938 TCGA-13-0714 TCGA-13-0720 TCGA-13-0723 TCGA-13-0725 TCGA-13-0727 
       19.86         6.21        44.55        39.58        12.39        15.19 
TCGA-13-0730 TCGA-13-0757 TCGA-13-0758 TCGA-13-0761 TCGA-13-0762 TCGA-13-0764 
       17.79        11.18        11.38        34.06        32.25        31.04 
TCGA-13-0766 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0795 TCGA-13-0797 
       21.40        38.93        36.72        28.70        19.56         8.71 
TCGA-13-0799 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 
        7.79         8.28         8.19        43.82        35.28        35.28 
TCGA-13-0807 TCGA-13-0883 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 
       13.61        68.91        91.40        74.27        66.64        70.39 
TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 
       61.81        67.99        69.01        56.15        57.07        19.36 
TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 TCGA-13-0910 TCGA-13-0912 TCGA-13-0913 
       48.33        47.84        44.94        37.08        34.06        29.98 
TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 
       21.14        14.89        13.81         4.64         6.41         6.08 
TCGA-13-1403 TCGA-13-1405 TCGA-13-1407 TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 
       10.88         7.36         6.05         4.70         4.21         5.33 
TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1487 TCGA-13-1489 
       54.61        87.06        61.71        29.39        22.39        82.88 
TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 TCGA-13-1498 
       52.44        73.55        38.17        49.22         4.24        37.61 
TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1507 
       38.37        13.97        32.84        16.57         4.21         4.77 
TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2059 TCGA-13-2061 
        4.14         2.56         3.88         3.09        12.23        10.78 
TCGA-13-2065 TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 TCGA-20-1684 
        8.75        25.94        26.20        72.20        27.48        19.07 
TCGA-20-1686 TCGA-23-1021 TCGA-23-1022 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 
        2.93        47.54        42.51        15.39        26.83        31.73 
TCGA-23-1028 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1113 TCGA-23-1114 
       49.41        29.10        18.87         2.24        31.20        68.68 
TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 
        4.57        33.30        86.01         4.27         6.38        39.09 
TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 TCGA-23-2072 TCGA-23-2077 TCGA-23-2078 
       33.47        58.13         0.53        24.95       115.89        87.48 
TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 
       77.00        49.84         2.76         4.70         4.50         7.63 
TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-0980 TCGA-24-0982 TCGA-24-1104 
       19.63        11.64        21.80         7.66        22.32        63.55 
TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 TCGA-24-1419 TCGA-24-1422 
       47.41         6.31         6.38         7.82         7.86         0.76 
TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 
        6.25         6.02         5.95         5.36         4.80        17.36 
TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 TCGA-24-1436 TCGA-24-1463 TCGA-24-1464 
       28.34        19.17        18.67         8.55        72.92        12.46 
TCGA-24-1466 TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 
       45.14       105.99         9.11         3.42         1.18        22.19 
TCGA-24-1544 TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 
       26.96        64.27        16.21        56.58        41.06        51.91 
TCGA-24-1552 TCGA-24-1555 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 TCGA-24-1564 
       41.39        88.50        19.53        44.09        45.50        25.87 
TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 
       10.26        17.23        90.15        88.34        48.33        38.24 
TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 TCGA-24-1845 TCGA-24-1846 TCGA-24-1850 
        8.32         3.48         3.72         3.81         4.37         5.49 
TCGA-24-1920 TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 TCGA-24-1930 TCGA-24-2023 
        9.80        30.21        16.41        11.05        81.11        44.84 
TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 
       58.16        34.82       109.68        14.43        53.95        18.48 
TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 
       28.18        64.01        44.48        57.07        36.16         0.79 
TCGA-24-2262 TCGA-24-2267 TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 
        0.36        47.54        70.45        44.58         0.82        67.36 
TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 TCGA-24-2298 TCGA-25-1313 
       36.23        16.64        33.11        55.86        53.26        26.93 
TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1318 TCGA-25-1319 TCGA-25-1321 
       31.99        51.06        37.02        34.98        65.00        33.96 
TCGA-25-1322 TCGA-25-1323 TCGA-25-1626 TCGA-25-1627 TCGA-25-1630 TCGA-25-1631 
        2.99        12.00        15.78         0.36         7.86         0.30 
TCGA-25-1633 TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 TCGA-25-1878 
       60.59        35.54        51.22        14.93        24.99        85.05 
TCGA-25-2042 TCGA-25-2391 TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 TCGA-25-2399 
       13.02        49.05        38.04         3.02        12.00        19.99 
TCGA-25-2400 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1694 
       42.02        29.00        30.97        26.96        78.87        38.53 
TCGA-29-1695 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 TCGA-29-1703 
        0.79        31.17        68.28         0.53        16.90        59.67 
TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 
       18.25        41.95        29.23        34.62        17.00        85.68 
TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 
       39.09        31.23        22.98        24.36        22.52        17.29 
TCGA-29-1775 TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 
       12.36        12.30        14.93         8.35         7.20         5.36 
TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 TCGA-29-2432 
       86.17        65.00        62.47        45.11         4.87        11.84 
TCGA-29-2434 TCGA-29-2436 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 
       11.47         9.76         2.47        15.68         0.26        48.07 
TCGA-30-1860 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 
       44.91         6.08        36.62         1.18        57.57        24.26 
TCGA-30-1891 TCGA-31-1944 TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 
       30.05        45.57        18.77        22.45         6.71        42.51 
TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 
       28.73        29.06        21.53        22.85        22.55         8.55 
TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 TCGA-36-1581 TCGA-36-2530 TCGA-36-2532 
       25.74        27.85        24.23        24.69        33.01        29.49 
TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 
       29.79        25.91        25.08        23.80        21.60         2.24 
TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 TCGA-36-2549 TCGA-36-2552 TCGA-42-2587 
       20.98        18.31        20.52         6.05        11.47        23.74 
TCGA-42-2588 TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1583 
        9.44         7.56         7.46        22.39         1.48        11.38 
TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 
       21.14         1.74        22.32        28.96        25.05        25.02 
TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 TCGA-59-2363 
      180.16        80.12        22.32       116.12         9.40         5.39 
TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 
       44.78        11.11         8.05        20.94        31.40        18.54 
TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 
       27.88         4.34        31.76        28.47        48.79        44.84 
TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1895 TCGA-61-1900 TCGA-61-1901 
       35.80         2.43        33.67         1.41         5.79        11.41 
TCGA-61-1903 TCGA-61-1904 TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 
       13.02         9.07        31.30        37.02        42.48        48.92 
TCGA-61-1914 TCGA-61-1915 TCGA-61-1917 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 
       56.58        67.73        43.43        38.17         1.97         5.52 
TCGA-61-2000 TCGA-61-2002 TCGA-61-2008 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 
       14.50        17.98        30.61        30.64         1.18        45.96 
TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 
       45.40         4.80         4.77        51.72        71.74        61.64 
TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 
       58.39        60.62        65.49        55.50         6.48        76.83 
TCGA-61-2109 TCGA-61-2110 TCGA-61-2113 TCGA-61-2613 
       20.68        44.52        22.22        31.07 

  8P GAIN MUTATED 8P GAIN WILD-TYPE 
             1.02              0.26 
  8P GAIN MUTATED 8P GAIN WILD-TYPE 
           151.99            180.16 
  8P GAIN MUTATED 8P GAIN WILD-TYPE 
           31.070            27.665 
[1] "1.0 - 152.0 (31.1)" "0.3 - 180.2 (27.7)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "8P GAIN MUTATED"   "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "8P GAIN MUTATED"   "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED"   "8P GAIN MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "8P GAIN MUTATED"   "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "8P GAIN MUTATED"   "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "8P GAIN MUTATED"   "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED"   "8P GAIN MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "8P GAIN MUTATED"   "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "8P GAIN MUTATED"   "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "8P GAIN MUTATED"   "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED"   "8P GAIN MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "8P GAIN MUTATED"   "8P GAIN MUTATED"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED"   "8P GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"8P GAIN WILD-TYPE" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" "8P GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "8P GAIN MUTATED" "8P GAIN WILD-TYPE"   "8P GAIN MUTATED" 
[1] "hr=" "1"  
D15V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  8P GAIN MUTATED         0   117                1
  8P GAIN WILD-TYPE       2   431                1
D15V3, multiclass
                  clus
vv                 8P GAIN MUTATED 8P GAIN WILD-TYPE
  OMENTUM                        0                 2
  OVARY                        117               431
  PERITONEUM OVARY               1                 1
D15V4, continuous
D15V5, binary
                   cls
clus                  0   1
  8P GAIN MUTATED     1 118
  8P GAIN WILD-TYPE   2 441
[1] "tbl2"
                   cls
clus                [,1] [,2]
  8P GAIN MUTATED      1  118
  8P GAIN WILD-TYPE    2  441
     clus
vv    8P GAIN MUTATED 8P GAIN WILD-TYPE
  NO                1                 2
  YES             118               441
                   vv
clus                R0 R1 R2
  8P GAIN MUTATED    2  6  0
  8P GAIN WILD-TYPE 12 20  2
D15V6, multiclass
    clus
vv   8P GAIN MUTATED 8P GAIN WILD-TYPE
  R0               2                12
  R1               6                20
  R2               0                 2

Clustering(16) Variable = 8Q GAIN MUTATION ANALYSIS
D16V1, survival
                   sevent
clus2                 0   1
  8Q GAIN MUTATED   101 132
  8Q GAIN WILD-TYPE 160 154
  8Q GAIN MUTATED 8Q GAIN WILD-TYPE 
              233               314 
  8Q GAIN MUTATED 8Q GAIN WILD-TYPE 
              132               154 
$`8Q GAIN MUTATED`
TCGA-04-1335 TCGA-04-1338 TCGA-04-1342 TCGA-04-1343 TCGA-04-1347 TCGA-04-1349 
        1.81        46.62        18.51        11.87        63.06        21.57 
TCGA-04-1351 TCGA-04-1356 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1530 
       65.46        49.28        44.32        33.67        76.54       119.08 
TCGA-04-1536 TCGA-04-1542 TCGA-04-1646 TCGA-04-1652 TCGA-09-0365 TCGA-09-0369 
       29.06        84.20        27.88        31.86         9.47        35.54 
TCGA-09-1659 TCGA-09-1665 TCGA-09-1667 TCGA-09-1668 TCGA-09-1670 TCGA-09-1672 
        9.96        41.59        61.87        55.36        17.98         5.85 
TCGA-09-1674 TCGA-09-2043 TCGA-10-0925 TCGA-10-0927 TCGA-10-0930 TCGA-10-0933 
        8.55         6.15        54.31        81.47        33.24        11.70 
TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 TCGA-13-0717 TCGA-13-0724 
       35.41        35.80        15.12        19.86        24.59         2.73 
TCGA-13-0726 TCGA-13-0751 TCGA-13-0755 TCGA-13-0760 TCGA-13-0761 TCGA-13-0768 
       31.07        55.17         2.47        11.54        34.06         8.42 
TCGA-13-0792 TCGA-13-0794 TCGA-13-0800 TCGA-13-0802 TCGA-13-0807 TCGA-13-0883 
       36.72        30.35         8.12         8.19        13.61        68.91 
TCGA-13-0884 TCGA-13-0890 TCGA-13-0893 TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 
      107.18        67.99        43.36        57.47        56.15        57.07 
TCGA-13-0903 TCGA-13-0911 TCGA-13-0919 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 
       47.38        27.68        14.89         6.08        10.88         6.61 
TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 TCGA-13-1411 TCGA-13-1484 TCGA-13-1485 
        5.92         6.84         4.70         4.21        98.04        20.68 
TCGA-13-1488 TCGA-13-1497 TCGA-13-1500 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 
       70.82        54.31        13.97        16.57         4.21         4.41 
TCGA-13-1507 TCGA-13-2059 TCGA-13-2060 TCGA-13-2071 TCGA-20-0987 TCGA-20-0991 
        4.77        12.23         8.58         6.28        23.05        26.20 
TCGA-20-1683 TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1022 TCGA-23-1023 
       25.38        16.67         2.93         2.66        42.51        40.54 
TCGA-23-1026 TCGA-23-1029 TCGA-23-1031 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 
       26.83         8.81        18.87        51.35        54.51         3.22 
TCGA-23-1116 TCGA-23-1117 TCGA-23-1119 TCGA-23-1121 TCGA-23-1124 TCGA-23-2072 
        4.57        33.30       129.96         6.38        58.13        24.95 
TCGA-23-2077 TCGA-23-2079 TCGA-23-2084 TCGA-23-2643 TCGA-23-2645 TCGA-24-0975 
      115.89        91.66        49.84         4.70         4.50        21.80 
TCGA-24-0979 TCGA-24-1103 TCGA-24-1105 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 
       41.56        54.08        47.41         7.82         7.99         7.86 
TCGA-24-1422 TCGA-24-1423 TCGA-24-1435 TCGA-24-1436 TCGA-24-1464 TCGA-24-1467 
        0.76         6.25        43.53         8.55        12.46       105.99 
TCGA-24-1545 TCGA-24-1546 TCGA-24-1549 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 
       57.37        64.27        56.58        41.39        58.09        88.50 
TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 TCGA-24-1563 TCGA-24-1564 TCGA-24-1844 
       70.62        39.88        19.53        47.70        25.87         3.72 
TCGA-24-1847 TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-2019 TCGA-24-2020 
       11.28        22.65        30.21        16.41         4.87       151.99 
TCGA-24-2027 TCGA-24-2033 TCGA-24-2035 TCGA-24-2262 TCGA-24-2271 TCGA-24-2290 
      109.68        18.48        28.18         0.36        31.63        36.23 
TCGA-24-2295 TCGA-25-1312 TCGA-25-1317 TCGA-25-1320 TCGA-25-1321 TCGA-25-1329 
       33.11         1.02         1.02        36.95        33.96         2.96 
TCGA-25-1623 TCGA-25-1625 TCGA-25-1627 TCGA-25-1628 TCGA-25-1632 TCGA-25-1877 
       18.58        18.02         0.36        20.58        56.94        18.05 
TCGA-25-1878 TCGA-25-2392 TCGA-25-2396 TCGA-25-2398 TCGA-25-2399 TCGA-25-2401 
       85.05         1.02         3.02        45.01        19.99         2.96 
TCGA-29-1690 TCGA-29-1691 TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 
       44.71        47.18       101.75        38.53         0.79        33.70 
TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 
       31.17        68.28         0.53        16.90        18.64        59.67 
TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1774 TCGA-29-1776 TCGA-29-1778 
       66.77        62.93        39.09        17.29        11.84        14.93 
TCGA-29-1783 TCGA-29-1785 TCGA-29-2427 TCGA-29-2431 TCGA-29-2432 TCGA-30-1714 
        7.20        34.62        62.47        42.25        11.84        38.07 
TCGA-30-1718 TCGA-30-1853 TCGA-30-1857 TCGA-30-1859 TCGA-30-1861 TCGA-30-1887 
       51.91        36.26         0.26        48.07        34.78        24.26 
TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 TCGA-31-1956 
       48.79        45.57        30.18        18.77        22.45        44.09 
TCGA-31-1959 TCGA-36-1569 TCGA-36-1570 TCGA-36-1574 TCGA-36-1576 TCGA-36-1580 
        2.17        29.06        21.53        22.55        30.05        24.23 
TCGA-36-2529 TCGA-36-2543 TCGA-36-2548 TCGA-36-2551 TCGA-42-2582 TCGA-42-2588 
       35.05         2.24        14.17        16.14        26.04         9.44 
TCGA-57-1582 TCGA-57-1585 TCGA-57-1586 TCGA-59-2348 TCGA-59-2354 TCGA-59-2355 
       24.03         1.74        22.32       180.16        34.39         2.14 
TCGA-61-1724 TCGA-61-1725 TCGA-61-1728 TCGA-61-1736 TCGA-61-1741 TCGA-61-1743 
       20.94        31.40        27.88        48.79        33.67        43.69 
TCGA-61-1899 TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1914 
        8.42        34.13        31.30        37.02        42.48        56.58 
TCGA-61-1918 TCGA-61-1919 TCGA-61-1998 TCGA-61-2003 TCGA-61-2009 TCGA-61-2016 
       15.75        38.17         5.52         3.98        39.85         1.18 
TCGA-61-2088 TCGA-61-2109 TCGA-61-2111 TCGA-61-2612 TCGA-61-2614 
        4.77        20.68       125.72         6.35         8.58 

$`8Q GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1336 TCGA-04-1337 TCGA-04-1346 TCGA-04-1348 
       40.24        41.00        49.15         2.01        65.49        48.76 
TCGA-04-1350 TCGA-04-1361 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 
       63.98        32.52        71.47        82.36        56.55        41.59 
TCGA-04-1517 TCGA-04-1525 TCGA-04-1638 TCGA-04-1644 TCGA-04-1648 TCGA-04-1649 
       19.99        38.37        55.40        48.89        28.64        64.64 
TCGA-04-1651 TCGA-04-1654 TCGA-04-1655 TCGA-09-0364 TCGA-09-0366 TCGA-09-0367 
       36.23        47.70        45.34        29.16        57.73        17.95 
TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1666 TCGA-09-1669 TCGA-09-1673 
       38.43        89.33        74.89        57.57        30.48         3.02 
TCGA-09-1675 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 
       97.55         6.12        35.15         4.50       112.37        71.11 
TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0926 
       63.09        39.75        20.91        26.93        12.46        25.91 
TCGA-10-0928 TCGA-10-0931 TCGA-10-0934 TCGA-13-0714 TCGA-13-0720 TCGA-13-0723 
       18.48        32.28         3.88         6.21        44.55        39.58 
TCGA-13-0725 TCGA-13-0727 TCGA-13-0730 TCGA-13-0757 TCGA-13-0758 TCGA-13-0762 
       12.39        15.19        17.79        11.18        11.38        32.25 
TCGA-13-0764 TCGA-13-0766 TCGA-13-0791 TCGA-13-0793 TCGA-13-0795 TCGA-13-0797 
       31.04        21.40        38.93        28.70        19.56         8.71 
TCGA-13-0799 TCGA-13-0801 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0885 
        7.79         8.28        43.82        35.28        35.28        91.40 
TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 TCGA-13-0891 TCGA-13-0901 
       74.27        66.64        70.39        61.81        69.01        19.36 
TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0912 
       48.33        47.84        44.94        44.84        37.08        34.06 
TCGA-13-0913 TCGA-13-0916 TCGA-13-0920 TCGA-13-0921 TCGA-13-0923 TCGA-13-1405 
       29.98        21.14        13.81         4.64         6.41         7.36 
TCGA-13-1407 TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 
        6.05         5.33        54.61        87.06        61.71        29.39 
TCGA-13-1487 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 
       22.39        82.88        52.44        73.55        38.17        49.22 
TCGA-13-1496 TCGA-13-1498 TCGA-13-1499 TCGA-13-1501 TCGA-13-1509 TCGA-13-1510 
        4.24        37.61        38.37        32.84         4.14         2.56 
TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 TCGA-13-2061 TCGA-13-2065 TCGA-20-0990 
        3.88         3.09        14.24        10.78         8.75        25.94 
TCGA-20-0996 TCGA-20-1682 TCGA-20-1684 TCGA-23-1021 TCGA-23-1024 TCGA-23-1027 
       72.20        27.48        19.07        47.54        15.39        31.73 
TCGA-23-1028 TCGA-23-1030 TCGA-23-1032 TCGA-23-1113 TCGA-23-1114 TCGA-23-1118 
       49.41        29.10         2.24        31.20        68.68        86.01 
TCGA-23-1120 TCGA-23-1122 TCGA-23-1123 TCGA-23-1809 TCGA-23-2078 TCGA-23-2081 
        4.27        39.09        33.47         0.53        87.48        77.00 
TCGA-23-2641 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0980 TCGA-24-0982 
        2.76         7.63        19.63        11.64         7.66        22.32 
TCGA-24-1104 TCGA-24-1413 TCGA-24-1416 TCGA-24-1424 TCGA-24-1425 TCGA-24-1426 
       63.55         6.31         6.38         6.02         5.95         5.36 
TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 TCGA-24-1463 
        4.80        17.36        28.34        19.17        18.67        72.92 
TCGA-24-1466 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 
       45.14         9.11         3.42         1.18        22.19        26.96 
TCGA-24-1548 TCGA-24-1550 TCGA-24-1551 TCGA-24-1560 TCGA-24-1562 TCGA-24-1565 
       16.21        41.06        51.91        44.09        45.50        10.26 
TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 
       17.23        90.15        88.34        48.33        38.24         8.32 
TCGA-24-1843 TCGA-24-1845 TCGA-24-1846 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 
        3.48         3.81         4.37         5.75         5.49         9.80 
TCGA-24-1928 TCGA-24-1930 TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2029 
       11.05        81.11        44.84        58.16        34.82        14.43 
TCGA-24-2030 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 
       53.95        64.01        44.48        57.07        36.16         0.79 
TCGA-24-2267 TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 TCGA-24-2293 
       47.54        70.45        44.58         0.82        67.36        16.64 
TCGA-24-2297 TCGA-24-2298 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 
       55.86        53.26        26.93        31.99        51.06        37.02 
TCGA-25-1318 TCGA-25-1319 TCGA-25-1322 TCGA-25-1323 TCGA-25-1626 TCGA-25-1630 
       34.98        65.00         2.99        12.00        15.78         7.86 
TCGA-25-1631 TCGA-25-1633 TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 
        0.30        60.59        35.54        51.22        14.93        24.99 
TCGA-25-2042 TCGA-25-2391 TCGA-25-2393 TCGA-25-2397 TCGA-25-2400 TCGA-25-2404 
       13.02        49.05        38.04        12.00        42.02        29.00 
TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 
       30.97        26.96        78.87        18.25        41.95        29.23 
TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 
       34.62        17.00        85.68        31.23        22.98        24.36 
TCGA-29-1771 TCGA-29-1775 TCGA-29-1777 TCGA-29-1781 TCGA-29-1784 TCGA-29-2414 
       22.52        12.36        12.30         8.35         5.36        86.17 
TCGA-29-2425 TCGA-29-2428 TCGA-29-2429 TCGA-29-2434 TCGA-29-2436 TCGA-30-1855 
       65.00        45.11         4.87        11.47         9.76         2.47 
TCGA-30-1856 TCGA-30-1860 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 
       15.68        44.91         6.08        36.62         1.18        57.57 
TCGA-30-1891 TCGA-31-1953 TCGA-31-1955 TCGA-36-1568 TCGA-36-1571 TCGA-36-1575 
       30.05         6.71        42.51        28.73        22.85         8.55 
TCGA-36-1577 TCGA-36-1578 TCGA-36-1581 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 
       25.74        27.85        24.69        33.01        29.49        29.79 
TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2544 TCGA-36-2545 
       25.91        25.08        23.80        21.60        20.98        18.31 
TCGA-36-2547 TCGA-36-2549 TCGA-36-2552 TCGA-42-2587 TCGA-42-2589 TCGA-42-2590 
       20.52         6.05        11.47        23.74         7.56         7.46 
TCGA-42-2591 TCGA-42-2593 TCGA-57-1583 TCGA-57-1584 TCGA-57-1992 TCGA-57-1993 
       22.39         1.48        11.38        21.14        28.96        25.05 
TCGA-57-1994 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 TCGA-59-2363 
       25.02        80.12        22.32       116.12         9.40         5.39 
TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 TCGA-61-1727 TCGA-61-1730 TCGA-61-1733 
       44.78        11.11         8.05        18.54         4.34        31.76 
TCGA-61-1734 TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1895 TCGA-61-1900 
       28.47        44.84        35.80         2.43         1.41         5.79 
TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1913 TCGA-61-1915 TCGA-61-1917 
       11.41        13.02         9.07        48.92        67.73        43.43 
TCGA-61-1995 TCGA-61-2000 TCGA-61-2002 TCGA-61-2008 TCGA-61-2012 TCGA-61-2017 
        1.97        14.50        17.98        30.61        30.64        45.96 
TCGA-61-2018 TCGA-61-2087 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 
       45.40         4.80        51.72        71.74        61.64        58.39 
TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2110 
       60.62        65.49        55.50         6.48        76.83        44.52 
TCGA-61-2113 TCGA-61-2613 
       22.22        31.07 

  8Q GAIN MUTATED 8Q GAIN WILD-TYPE 
             0.26              0.30 
  8Q GAIN MUTATED 8Q GAIN WILD-TYPE 
           180.16            116.12 
  8Q GAIN MUTATED 8Q GAIN WILD-TYPE 
           26.200            28.845 
[1] "0.3 - 180.2 (26.2)" "0.3 - 116.1 (28.8)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED"   "8Q GAIN MUTATED" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "8Q GAIN MUTATED"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" "8Q GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "8Q GAIN MUTATED" "8Q GAIN WILD-TYPE"   "8Q GAIN MUTATED" 
[1] "hr=" "1.2"
D16V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  8Q GAIN MUTATED         1   233                2
  8Q GAIN WILD-TYPE       1   315                0
D16V3, multiclass
                  clus
vv                 8Q GAIN MUTATED 8Q GAIN WILD-TYPE
  OMENTUM                        1                 1
  OVARY                        233               315
  PERITONEUM OVARY               2                 0
D16V4, continuous
D16V5, binary
                   cls
clus                  0   1
  8Q GAIN MUTATED     1 237
  8Q GAIN WILD-TYPE   2 322
[1] "tbl2"
                   cls
clus                [,1] [,2]
  8Q GAIN MUTATED      1  237
  8Q GAIN WILD-TYPE    2  322
     clus
vv    8Q GAIN MUTATED 8Q GAIN WILD-TYPE
  NO                1                 2
  YES             237               322
                   vv
clus                R0 R1 R2
  8Q GAIN MUTATED    2 11  1
  8Q GAIN WILD-TYPE 12 15  1
D16V6, multiclass
    clus
vv   8Q GAIN MUTATED 8Q GAIN WILD-TYPE
  R0               2                12
  R1              11                15
  R2               1                 1

Clustering(17) Variable = 9P GAIN MUTATION ANALYSIS
D17V1, survival
                   sevent
clus2                 0   1
  9P GAIN MUTATED    38  47
  9P GAIN WILD-TYPE 223 239
  9P GAIN MUTATED 9P GAIN WILD-TYPE 
               85               462 
  9P GAIN MUTATED 9P GAIN WILD-TYPE 
               47               239 
$`9P GAIN MUTATED`
TCGA-04-1516 TCGA-04-1655 TCGA-09-1668 TCGA-09-2045 TCGA-09-2051 TCGA-10-0933 
       41.59        45.34        55.36        35.15        63.09        11.70 
TCGA-10-0935 TCGA-10-0936 TCGA-13-0723 TCGA-13-0730 TCGA-13-0751 TCGA-13-0807 
       35.41        35.80        39.58        17.79        55.17        13.61 
TCGA-13-0884 TCGA-13-0893 TCGA-13-0911 TCGA-13-0923 TCGA-13-1484 TCGA-13-1488 
      107.18        43.36        27.68         6.41        98.04        70.82 
TCGA-13-1504 TCGA-13-1505 TCGA-13-1507 TCGA-13-1511 TCGA-20-0990 TCGA-20-1683 
       16.57         4.21         4.77         3.88        25.94        25.38 
TCGA-20-1686 TCGA-20-1687 TCGA-23-1024 TCGA-23-1026 TCGA-23-1032 TCGA-23-1117 
        2.93         2.66        15.39        26.83         2.24        33.30 
TCGA-23-1121 TCGA-23-1122 TCGA-23-1809 TCGA-23-2077 TCGA-23-2084 TCGA-24-0968 
        6.38        39.09         0.53       115.89        49.84        19.63 
TCGA-24-0980 TCGA-24-1424 TCGA-24-1428 TCGA-24-1436 TCGA-24-1466 TCGA-24-1469 
        7.66         6.02        17.36         8.55        45.14         9.11 
TCGA-24-1471 TCGA-24-1544 TCGA-24-1552 TCGA-24-1553 TCGA-24-1556 TCGA-24-1614 
        1.18        26.96        41.39        58.09        70.62        48.33 
TCGA-24-1842 TCGA-24-1844 TCGA-24-1847 TCGA-24-1850 TCGA-24-1924 TCGA-24-1928 
        8.32         3.72        11.28         5.49        30.21        11.05 
TCGA-24-2020 TCGA-24-2026 TCGA-24-2288 TCGA-24-2298 TCGA-25-1319 TCGA-25-1320 
      151.99        34.82         0.82        53.26        65.00        36.95 
TCGA-25-1329 TCGA-25-1628 TCGA-25-1635 TCGA-25-1878 TCGA-25-2396 TCGA-25-2404 
        2.96        20.58        51.22        85.05         3.02        29.00 
TCGA-29-1762 TCGA-29-1763 TCGA-29-1777 TCGA-29-1784 TCGA-30-1855 TCGA-30-1859 
       85.68        66.77        12.30         5.36         2.47        48.07 
TCGA-30-1862 TCGA-30-1867 TCGA-36-1577 TCGA-36-1581 TCGA-36-2532 TCGA-36-2543 
        6.08         1.18        25.74        24.69        29.49         2.24 
TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 TCGA-61-1904 TCGA-61-2087 TCGA-61-2094 
       33.67        43.69         1.41         9.07         4.80        71.74 
TCGA-61-2111 
      125.72 

$`9P GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 
       18.51        11.87        65.49        63.06        48.76        21.57 
TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 
       63.98        65.46        49.28        32.52        44.32        33.67 
TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 TCGA-04-1517 TCGA-04-1525 
       76.54        71.47        82.36        56.55        19.99        38.37 
TCGA-04-1530 TCGA-04-1536 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 
      119.08        29.06        84.20        55.40        48.89        27.88 
TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 TCGA-09-0364 
       28.64        64.64        36.23        31.86        47.70        29.16 
TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 
        9.47        57.73        17.95        35.54         9.96        38.43 
TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 TCGA-09-1669 
       89.33        74.89        41.59        57.57        61.87        30.48 
TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 
       17.98         5.85         3.02         8.55        97.55         6.15 
TCGA-09-2044 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2053 TCGA-09-2054 
        6.12         4.50       112.37        71.11        39.75        20.91 
TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 
       26.93        12.46        54.31        25.91        81.47        18.48 
TCGA-10-0930 TCGA-10-0931 TCGA-10-0934 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 
       33.24        32.28         3.88        15.12        19.86         6.21 
TCGA-13-0717 TCGA-13-0720 TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 
       24.59        44.55         2.73        12.39        31.07        15.19 
TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 TCGA-13-0762 
        2.47        11.18        11.38        11.54        34.06        32.25 
TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 
       31.04        21.40         8.42        38.93        36.72        28.70 
TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 
       30.35        19.56         8.71         7.79         8.12         8.28 
TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0883 TCGA-13-0885 
        8.19        43.82        35.28        35.28        68.91        91.40 
TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 
       74.27        66.64        70.39        61.81        67.99        69.01 
TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 
       57.47        56.15        57.07        19.36        47.38        48.33 
TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0912 TCGA-13-0913 
       47.84        44.94        44.84        37.08        34.06        29.98 
TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 TCGA-13-0921 TCGA-13-0924 TCGA-13-1403 
       21.14        14.89        13.81         4.64         6.08        10.88 
TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 
        6.61         7.36         6.05         5.92         6.84         4.70 
TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 
        4.21         5.33        54.61        87.06        61.71        29.39 
TCGA-13-1485 TCGA-13-1487 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 
       20.68        22.39        82.88        52.44        73.55        38.17 
TCGA-13-1495 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 
       49.22         4.24        54.31        37.61        38.37        13.97 
TCGA-13-1501 TCGA-13-1506 TCGA-13-1509 TCGA-13-1510 TCGA-13-1512 TCGA-13-2057 
       32.84         4.41         4.14         2.56         3.09        14.24 
TCGA-13-2059 TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 
       12.23         8.58        10.78         8.75         6.28        23.05 
TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 TCGA-20-1684 TCGA-20-1685 TCGA-23-1021 
       26.20        72.20        27.48        19.07        16.67        47.54 
TCGA-23-1022 TCGA-23-1023 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 
       42.51        40.54        31.73        49.41         8.81        29.10 
TCGA-23-1031 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 
       18.87        51.35        54.51         3.22        31.20        68.68 
TCGA-23-1116 TCGA-23-1118 TCGA-23-1119 TCGA-23-1120 TCGA-23-1123 TCGA-23-1124 
        4.57        86.01       129.96         4.27        33.47        58.13 
TCGA-23-2072 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2641 TCGA-23-2643 
       24.95        87.48        91.66        77.00         2.76         4.70 
TCGA-23-2645 TCGA-24-0966 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 TCGA-24-0982 
        4.50         7.63        11.64        21.80        41.56        22.32 
TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 
       54.08        63.55        47.41         6.31         6.38         7.82 
TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1425 TCGA-24-1426 
        7.99         7.86         0.76         6.25         5.95         5.36 
TCGA-24-1427 TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 TCGA-24-1463 
        4.80        28.34        19.17        18.67        43.53        72.92 
TCGA-24-1464 TCGA-24-1467 TCGA-24-1470 TCGA-24-1474 TCGA-24-1545 TCGA-24-1546 
       12.46       105.99         3.42        22.19        57.37        64.27 
TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1555 TCGA-24-1557 
       16.21        56.58        41.06        51.91        88.50        39.88 
TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 
       19.53        44.09        45.50        47.70        25.87        10.26 
TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 TCGA-24-1616 TCGA-24-1843 TCGA-24-1845 
       17.23        90.15        88.34        38.24         3.48         3.81 
TCGA-24-1846 TCGA-24-1849 TCGA-24-1920 TCGA-24-1923 TCGA-24-1927 TCGA-24-1930 
        4.37         5.75         9.80        22.65        16.41        81.11 
TCGA-24-2019 TCGA-24-2023 TCGA-24-2024 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 
        4.87        44.84        58.16       109.68        14.43        53.95 
TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 
       18.48        28.18        64.01        44.48        57.07        36.16 
TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 
        0.79         0.36        47.54        31.63        70.45        44.58 
TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 TCGA-25-1312 
       67.36        36.23        16.64        33.11        55.86         1.02 
TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 
       26.93        31.99        51.06        37.02         1.02        34.98 
TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 
       33.96         2.99        12.00        18.58        18.02        15.78 
TCGA-25-1627 TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 
        0.36         7.86         0.30        56.94        60.59        35.54 
TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 
       14.93        24.99        18.05        13.02        49.05         1.02 
TCGA-25-2393 TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 
       38.04        12.00        45.01        19.99        42.02         2.96 
TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 TCGA-29-1693 
       30.97        26.96        78.87        44.71        47.18       101.75 
TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 
       38.53         0.79        33.70        31.17        68.28         0.53 
TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 
       16.90        18.64        59.67        18.25        41.95        29.23 
TCGA-29-1711 TCGA-29-1761 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 
       34.62        17.00        62.93        39.09        31.23        22.98 
TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 TCGA-29-1776 TCGA-29-1778 
       24.36        22.52        17.29        12.36        11.84        14.93 
TCGA-29-1781 TCGA-29-1783 TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 
        8.35         7.20        34.62        86.17        65.00        62.47 
TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 
       45.11         4.87        42.25        11.84        11.47         9.76 
TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 TCGA-30-1856 TCGA-30-1857 TCGA-30-1860 
       38.07        51.91        36.26        15.68         0.26        44.91 
TCGA-30-1861 TCGA-30-1866 TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 
       34.78        36.62        57.57        24.26        30.05        48.79 
TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 
       45.57        30.18        18.77        22.45         6.71        42.51 
TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 
       44.09         2.17        28.73        29.06        21.53        22.85 
TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 TCGA-36-1578 TCGA-36-1580 TCGA-36-2529 
       22.55         8.55        30.05        27.85        24.23        35.05 
TCGA-36-2530 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 
       33.01        29.79        25.91        25.08        23.80        21.60 
TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 
       20.98        18.31        20.52        14.17         6.05        16.14 
TCGA-36-2552 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 TCGA-42-2589 TCGA-42-2590 
       11.47        26.04        23.74         9.44         7.56         7.46 
TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 TCGA-57-1585 
       22.39         1.48        24.03        11.38        21.14         1.74 
TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 
       22.32        28.96        25.05        25.02       180.16        80.12 
TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 
       22.32       116.12         9.40        34.39         2.14         5.39 
TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 
       44.78        11.11         8.05        20.94        31.40        18.54 
TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 
       27.88         4.34        31.76        28.47        48.79        44.84 
TCGA-61-1738 TCGA-61-1740 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 
       35.80         2.43         8.42         5.79        11.41        13.02 
TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 
       34.13        31.30        37.02        42.48        48.92        56.58 
TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 
       67.73        43.43        15.75        38.17         1.97         5.52 
TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 
       14.50        17.98         3.98        30.61        39.85        30.64 
TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2088 TCGA-61-2092 TCGA-61-2095 
        1.18        45.96        45.40         4.77        51.72        61.64 
TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 
       58.39        60.62        65.49        55.50         6.48        76.83 
TCGA-61-2109 TCGA-61-2110 TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
       20.68        44.52        22.22         6.35        31.07         8.58 

  9P GAIN MUTATED 9P GAIN WILD-TYPE 
             0.53              0.26 
  9P GAIN MUTATED 9P GAIN WILD-TYPE 
           151.99            180.16 
  9P GAIN MUTATED 9P GAIN WILD-TYPE 
            25.94             28.67 
[1] "0.5 - 152.0 (25.9)" "0.3 - 180.2 (28.7)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "9P GAIN MUTATED"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED"   "9P GAIN MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED"   "9P GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED"   "9P GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED"   "9P GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "9P GAIN MUTATED"   "9P GAIN MUTATED"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "9P GAIN MUTATED"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED"   "9P GAIN MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED"   "9P GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED"   "9P GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED"   "9P GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "9P GAIN MUTATED"   "9P GAIN MUTATED"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "9P GAIN MUTATED"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED"   "9P GAIN MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED"   "9P GAIN MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED"   "9P GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED"   "9P GAIN MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "9P GAIN MUTATED"   "9P GAIN MUTATED"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
  "9P GAIN MUTATED" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE"   "9P GAIN MUTATED" "9P GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" "9P GAIN WILD-TYPE" 
[1] "hr=" "1"  
D17V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  9P GAIN MUTATED         0    86                0
  9P GAIN WILD-TYPE       2   462                2
D17V3, multiclass
                  clus
vv                 9P GAIN MUTATED 9P GAIN WILD-TYPE
  OMENTUM                        0                 2
  OVARY                         86               462
  PERITONEUM OVARY               0                 2
D17V4, continuous
D17V5, binary
                   cls
clus                  0   1
  9P GAIN MUTATED     1  86
  9P GAIN WILD-TYPE   2 473
[1] "tbl2"
                   cls
clus                [,1] [,2]
  9P GAIN MUTATED      1   86
  9P GAIN WILD-TYPE    2  473
     clus
vv    9P GAIN MUTATED 9P GAIN WILD-TYPE
  NO                1                 2
  YES              86               473
                   vv
clus                R0 R1 R2
  9P GAIN MUTATED    2  3  0
  9P GAIN WILD-TYPE 12 23  2
D17V6, multiclass
    clus
vv   9P GAIN MUTATED 9P GAIN WILD-TYPE
  R0               2                12
  R1               3                23
  R2               0                 2

Clustering(18) Variable = 9Q GAIN MUTATION ANALYSIS
D18V1, survival
                   sevent
clus2                 0   1
  9Q GAIN MUTATED    19  21
  9Q GAIN WILD-TYPE 242 265
  9Q GAIN MUTATED 9Q GAIN WILD-TYPE 
               40               507 
  9Q GAIN MUTATED 9Q GAIN WILD-TYPE 
               21               265 
$`9Q GAIN MUTATED`
TCGA-04-1516 TCGA-09-1668 TCGA-13-0723 TCGA-13-0761 TCGA-13-0887 TCGA-13-0893 
       41.59        55.36        39.58        34.06        66.64        43.36 
TCGA-13-0911 TCGA-13-1505 TCGA-20-1683 TCGA-20-1687 TCGA-23-1032 TCGA-23-1117 
       27.68         4.21        25.38         2.66         2.24        33.30 
TCGA-23-1122 TCGA-23-1809 TCGA-23-2084 TCGA-24-0980 TCGA-24-1466 TCGA-24-1552 
       39.09         0.53        49.84         7.66        45.14        41.39 
TCGA-24-1614 TCGA-24-1842 TCGA-24-1844 TCGA-24-1847 TCGA-24-1850 TCGA-24-2020 
       48.33         8.32         3.72        11.28         5.49       151.99 
TCGA-25-1329 TCGA-25-1628 TCGA-25-1635 TCGA-25-1878 TCGA-25-2404 TCGA-29-1762 
        2.96        20.58        51.22        85.05        29.00        85.68 
TCGA-29-1784 TCGA-30-1855 TCGA-30-1862 TCGA-31-1959 TCGA-36-1577 TCGA-36-2542 
        5.36         2.47         6.08         2.17        25.74        21.60 
TCGA-42-2591 TCGA-61-1740 TCGA-61-1907 TCGA-61-2008 
       22.39         2.43        31.30        30.61 

$`9Q GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 
       18.51        11.87        65.49        63.06        48.76        21.57 
TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 
       63.98        65.46        49.28        32.52        44.32        33.67 
TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 TCGA-04-1517 TCGA-04-1525 
       76.54        71.47        82.36        56.55        19.99        38.37 
TCGA-04-1530 TCGA-04-1536 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 
      119.08        29.06        84.20        55.40        48.89        27.88 
TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 TCGA-04-1655 
       28.64        64.64        36.23        31.86        47.70        45.34 
TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 TCGA-09-1659 
       29.16         9.47        57.73        17.95        35.54         9.96 
TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 
       38.43        89.33        74.89        41.59        57.57        61.87 
TCGA-09-1669 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 
       30.48        17.98         5.85         3.02         8.55        97.55 
TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 
        6.15         6.12        35.15         4.50       112.37        71.11 
TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 
       63.09        39.75        20.91        26.93        12.46        54.31 
TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 TCGA-10-0933 
       25.91        81.47        18.48        33.24        32.28        11.70 
TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 
        3.88        35.41        35.80        15.12        19.86         6.21 
TCGA-13-0717 TCGA-13-0720 TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 
       24.59        44.55         2.73        12.39        31.07        15.19 
TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 
       17.79        55.17         2.47        11.18        11.38        11.54 
TCGA-13-0762 TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 
       32.25        31.04        21.40         8.42        38.93        36.72 
TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 
       28.70        30.35        19.56         8.71         7.79         8.12 
TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 
        8.28         8.19        43.82        35.28        35.28        13.61 
TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 TCGA-13-0888 TCGA-13-0889 
       68.91       107.18        91.40        74.27        70.39        61.81 
TCGA-13-0890 TCGA-13-0891 TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 
       67.99        69.01        57.47        56.15        57.07        19.36 
TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 
       47.38        48.33        47.84        44.94        44.84        37.08 
TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 TCGA-13-0921 
       34.06        29.98        21.14        14.89        13.81         4.64 
TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 
        6.41         6.08        10.88         6.61         7.36         6.05 
TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 
        5.92         6.84         4.70         4.21         5.33        54.61 
TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 
       87.06        61.71        29.39        98.04        20.68        22.39 
TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 
       70.82        82.88        52.44        73.55        38.17        49.22 
TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 
        4.24        54.31        37.61        38.37        13.97        32.84 
TCGA-13-1504 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 
       16.57         4.41         4.77         4.14         2.56         3.88 
TCGA-13-1512 TCGA-13-2057 TCGA-13-2059 TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 
        3.09        14.24        12.23         8.58        10.78         8.75 
TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 
        6.28        23.05        25.94        26.20        72.20        27.48 
TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-23-1021 TCGA-23-1022 TCGA-23-1023 
       19.07        16.67         2.93        47.54        42.51        40.54 
TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 
       15.39        26.83        31.73        49.41         8.81        29.10 
TCGA-23-1031 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 
       18.87        51.35        54.51         3.22        31.20        68.68 
TCGA-23-1116 TCGA-23-1118 TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 TCGA-23-1123 
        4.57        86.01       129.96         4.27         6.38        33.47 
TCGA-23-1124 TCGA-23-2072 TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 
       58.13        24.95       115.89        87.48        91.66        77.00 
TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 
        2.76         4.70         4.50         7.63        19.63        11.64 
TCGA-24-0975 TCGA-24-0979 TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 
       21.80        41.56        22.32        54.08        63.55        47.41 
TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 
        6.31         6.38         7.82         7.99         7.86         0.76 
TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 
        6.25         6.02         5.95         5.36         4.80        17.36 
TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 
       28.34        19.17        18.67        43.53         8.55        72.92 
TCGA-24-1464 TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 
       12.46       105.99         9.11         3.42         1.18        22.19 
TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 
       26.96        57.37        64.27        16.21        56.58        41.06 
TCGA-24-1551 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 
       51.91        58.09        88.50        70.62        39.88        19.53 
TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 
       44.09        45.50        47.70        25.87        10.26        17.23 
TCGA-24-1603 TCGA-24-1604 TCGA-24-1616 TCGA-24-1843 TCGA-24-1845 TCGA-24-1846 
       90.15        88.34        38.24         3.48         3.81         4.37 
TCGA-24-1849 TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 
        5.75         9.80        22.65        30.21        16.41        11.05 
TCGA-24-1930 TCGA-24-2019 TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 
       81.11         4.87        44.84        58.16        34.82       109.68 
TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 
       14.43        53.95        18.48        28.18        64.01        44.48 
TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 
       57.07        36.16         0.79         0.36        47.54        31.63 
TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 
       70.45        44.58         0.82        67.36        36.23        16.64 
TCGA-24-2295 TCGA-24-2297 TCGA-24-2298 TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 
       33.11        55.86        53.26         1.02        26.93        31.99 
TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 
       51.06        37.02         1.02        34.98        65.00        36.95 
TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 
       33.96         2.99        12.00        18.58        18.02        15.78 
TCGA-25-1627 TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 
        0.36         7.86         0.30        56.94        60.59        35.54 
TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 
       14.93        24.99        18.05        13.02        49.05         1.02 
TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 
       38.04         3.02        12.00        45.01        19.99        42.02 
TCGA-25-2401 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 
        2.96        30.97        26.96        78.87        44.71        47.18 
TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 
      101.75        38.53         0.79        33.70        31.17        68.28 
TCGA-29-1699 TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 
        0.53        16.90        18.64        59.67        18.25        41.95 
TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 
       29.23        34.62        17.00        66.77        62.93        39.09 
TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 
       31.23        22.98        24.36        22.52        17.29        12.36 
TCGA-29-1776 TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 TCGA-29-1785 
       11.84        12.30        14.93         8.35         7.20        34.62 
TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 
       86.17        65.00        62.47        45.11         4.87        42.25 
TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 
       11.84        11.47         9.76        38.07        51.91        36.26 
TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 TCGA-30-1861 TCGA-30-1866 
       15.68         0.26        48.07        44.91        34.78        36.62 
TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 
        1.18        57.57        24.26        30.05        48.79        45.57 
TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 
       30.18        18.77        22.45         6.71        42.51        44.09 
TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 
       28.73        29.06        21.53        22.85        22.55         8.55 
TCGA-36-1576 TCGA-36-1578 TCGA-36-1580 TCGA-36-1581 TCGA-36-2529 TCGA-36-2530 
       30.05        27.85        24.23        24.69        35.05        33.01 
TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2543 
       29.49        29.79        25.91        25.08        23.80         2.24 
TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 
       20.98        18.31        20.52        14.17         6.05        16.14 
TCGA-36-2552 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 TCGA-42-2589 TCGA-42-2590 
       11.47        26.04        23.74         9.44         7.56         7.46 
TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 
        1.48        24.03        11.38        21.14         1.74        22.32 
TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 
       28.96        25.05        25.02       180.16        80.12        22.32 
TCGA-59-2351 TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 
      116.12         9.40        34.39         2.14         5.39        44.78 
TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 
       11.11         8.05        20.94        31.40        18.54        27.88 
TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 
        4.34        31.76        28.47        48.79        44.84        35.80 
TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 
       33.67        43.69         1.41         8.42         5.79        11.41 
TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 
       13.02         9.07        34.13        37.02        42.48        48.92 
TCGA-61-1914 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 TCGA-61-1995 
       56.58        67.73        43.43        15.75        38.17         1.97 
TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 TCGA-61-2009 TCGA-61-2012 
        5.52        14.50        17.98         3.98        39.85        30.64 
TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 
        1.18        45.96        45.40         4.80         4.77        51.72 
TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 
       71.74        61.64        58.39        60.62        65.49        55.50 
TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 
        6.48        76.83        20.68        44.52       125.72        22.22 
TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
        6.35        31.07         8.58 

  9Q GAIN MUTATED 9Q GAIN WILD-TYPE 
             0.53              0.26 
  9Q GAIN MUTATED 9Q GAIN WILD-TYPE 
           151.99            180.16 
  9Q GAIN MUTATED 9Q GAIN WILD-TYPE 
            26.71             28.34 
[1] "0.5 - 152.0 (26.7)" "0.3 - 180.2 (28.3)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
  "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE"   "9Q GAIN MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" "9Q GAIN WILD-TYPE" 
[1] "hr=" "1.1"
D18V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  9Q GAIN MUTATED         0    40                0
  9Q GAIN WILD-TYPE       2   508                2
D18V3, multiclass
                  clus
vv                 9Q GAIN MUTATED 9Q GAIN WILD-TYPE
  OMENTUM                        0                 2
  OVARY                         40               508
  PERITONEUM OVARY               0                 2
D18V4, continuous
D18V5, binary
                   cls
clus                  0   1
  9Q GAIN MUTATED     1  40
  9Q GAIN WILD-TYPE   2 519
[1] "tbl2"
                   cls
clus                [,1] [,2]
  9Q GAIN MUTATED      1   40
  9Q GAIN WILD-TYPE    2  519
     clus
vv    9Q GAIN MUTATED 9Q GAIN WILD-TYPE
  NO                1                 2
  YES              40               519
                   vv
clus                R0 R1 R2
  9Q GAIN MUTATED    1  2  0
  9Q GAIN WILD-TYPE 13 24  2
D18V6, multiclass
    clus
vv   9Q GAIN MUTATED 9Q GAIN WILD-TYPE
  R0               1                13
  R1               2                24
  R2               0                 2

Clustering(19) Variable = 10P GAIN MUTATION ANALYSIS
D19V1, survival
                    sevent
clus2                  0   1
  10P GAIN MUTATED    83  91
  10P GAIN WILD-TYPE 178 195
  10P GAIN MUTATED 10P GAIN WILD-TYPE 
               174                373 
  10P GAIN MUTATED 10P GAIN WILD-TYPE 
                91                195 
$`10P GAIN MUTATED`
TCGA-04-1332 TCGA-04-1338 TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1349 
       41.00        46.62        11.87        65.49        63.06        21.57 
TCGA-04-1350 TCGA-04-1356 TCGA-04-1517 TCGA-04-1530 TCGA-04-1542 TCGA-04-1646 
       63.98        49.28        19.99       119.08        84.20        27.88 
TCGA-04-1649 TCGA-04-1652 TCGA-04-1655 TCGA-09-0365 TCGA-09-1659 TCGA-09-1661 
       64.64        31.86        45.34         9.47         9.96        38.43 
TCGA-09-1667 TCGA-09-1668 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 
       61.87        55.36        17.98         5.85         3.02         8.55 
TCGA-09-2050 TCGA-09-2051 TCGA-10-0930 TCGA-10-0933 TCGA-13-0727 TCGA-13-0730 
       71.11        63.09        33.24        11.70        15.19        17.79 
TCGA-13-0751 TCGA-13-0757 TCGA-13-0762 TCGA-13-0768 TCGA-13-0800 TCGA-13-0802 
       55.17        11.18        32.25         8.42         8.12         8.19 
TCGA-13-0807 TCGA-13-0884 TCGA-13-0885 TCGA-13-0888 TCGA-13-0890 TCGA-13-0911 
       13.61       107.18        91.40        70.39        67.99        27.68 
TCGA-13-0919 TCGA-13-0923 TCGA-13-1407 TCGA-13-1409 TCGA-13-1411 TCGA-13-1412 
       14.89         6.41         6.05         6.84         4.21         5.33 
TCGA-13-1477 TCGA-13-1481 TCGA-13-1492 TCGA-13-1495 TCGA-13-1496 TCGA-13-1499 
       54.61        87.06        73.55        49.22         4.24        38.37 
TCGA-13-1504 TCGA-13-2060 TCGA-13-2061 TCGA-20-0987 TCGA-20-1682 TCGA-20-1683 
       16.57         8.58        10.78        23.05        27.48        25.38 
TCGA-20-1685 TCGA-20-1686 TCGA-23-1021 TCGA-23-1022 TCGA-23-1024 TCGA-23-1031 
       16.67         2.93        47.54        42.51        15.39        18.87 
TCGA-23-1032 TCGA-23-1110 TCGA-23-1116 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 
        2.24        54.51         4.57        39.09        33.47        58.13 
TCGA-23-2077 TCGA-23-2643 TCGA-24-0982 TCGA-24-1417 TCGA-24-1418 TCGA-24-1424 
      115.89         4.70        22.32         7.82         7.99         6.02 
TCGA-24-1427 TCGA-24-1428 TCGA-24-1436 TCGA-24-1469 TCGA-24-1544 TCGA-24-1548 
        4.80        17.36         8.55         9.11        26.96        16.21 
TCGA-24-1549 TCGA-24-1564 TCGA-24-1565 TCGA-24-1616 TCGA-24-1843 TCGA-24-1850 
       56.58        25.87        10.26        38.24         3.48         5.49 
TCGA-24-1928 TCGA-24-2020 TCGA-24-2260 TCGA-24-2261 TCGA-24-2281 TCGA-24-2293 
       11.05       151.99        36.16         0.79        44.58        16.64 
TCGA-25-1312 TCGA-25-1317 TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 TCGA-25-1329 
        1.02         1.02        36.95        33.96         2.99         2.96 
TCGA-25-1623 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 TCGA-25-1631 TCGA-25-1634 
       18.58        15.78         0.36        20.58         0.30        35.54 
TCGA-25-1635 TCGA-25-1871 TCGA-25-1877 TCGA-25-2392 TCGA-25-2398 TCGA-29-1691 
       51.22        24.99        18.05         1.02        45.01        47.18 
TCGA-29-1693 TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1710 TCGA-29-1763 
      101.75        16.90        18.64        59.67        29.23        66.77 
TCGA-29-1766 TCGA-29-1775 TCGA-29-1777 TCGA-29-1778 TCGA-29-1783 TCGA-29-1785 
       39.09        12.36        12.30        14.93         7.20        34.62 
TCGA-29-2414 TCGA-29-2425 TCGA-29-2428 TCGA-29-2432 TCGA-29-2436 TCGA-30-1856 
       86.17        65.00        45.11        11.84         9.76        15.68 
TCGA-30-1861 TCGA-30-1866 TCGA-30-1887 TCGA-31-1950 TCGA-31-1953 TCGA-36-1569 
       34.78        36.62        24.26        18.77         6.71        29.06 
TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 TCGA-36-1581 TCGA-36-2529 TCGA-36-2543 
       25.74        27.85        24.23        24.69        35.05         2.24 
TCGA-36-2548 TCGA-36-2551 TCGA-36-2552 TCGA-42-2588 TCGA-57-1582 TCGA-57-1583 
       14.17        16.14        11.47         9.44        24.03        11.38 
TCGA-57-1586 TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 TCGA-59-2352 TCGA-59-2372 
       22.32        25.05        25.02       180.16         9.40        44.78 
TCGA-61-1722 TCGA-61-1728 TCGA-61-1730 TCGA-61-1740 TCGA-61-1741 TCGA-61-1904 
        8.05        27.88         4.34         2.43        33.67         9.07 
TCGA-61-1907 TCGA-61-1911 TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 TCGA-61-2003 
       31.30        42.48        43.43        15.75        38.17         3.98 
TCGA-61-2012 TCGA-61-2018 TCGA-61-2098 TCGA-61-2101 TCGA-61-2111 TCGA-61-2612 
       30.64        45.40        65.49        55.50       125.72         6.35 

$`10P GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1342 TCGA-04-1348 
       40.24         1.81        49.15         2.01        18.51        48.76 
TCGA-04-1351 TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 
       65.46        32.52        44.32        33.67        76.54        71.47 
TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 TCGA-04-1525 TCGA-04-1536 TCGA-04-1638 
       82.36        56.55        41.59        38.37        29.06        55.40 
TCGA-04-1644 TCGA-04-1648 TCGA-04-1651 TCGA-04-1654 TCGA-09-0364 TCGA-09-0366 
       48.89        28.64        36.23        47.70        29.16        57.73 
TCGA-09-0367 TCGA-09-0369 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 
       17.95        35.54        89.33        74.89        41.59        57.57 
TCGA-09-1669 TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 
       30.48        97.55         6.15         6.12        35.15         4.50 
TCGA-09-2049 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 
      112.37        39.75        20.91        26.93        12.46        54.31 
TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0931 TCGA-10-0934 TCGA-10-0935 
       25.91        81.47        18.48        32.28         3.88        35.41 
TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 
       35.80        15.12        19.86         6.21        24.59        44.55 
TCGA-13-0723 TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 TCGA-13-0755 TCGA-13-0758 
       39.58         2.73        12.39        31.07         2.47        11.38 
TCGA-13-0760 TCGA-13-0761 TCGA-13-0764 TCGA-13-0766 TCGA-13-0791 TCGA-13-0792 
       11.54        34.06        31.04        21.40        38.93        36.72 
TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0801 
       28.70        30.35        19.56         8.71         7.79         8.28 
TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0883 TCGA-13-0886 TCGA-13-0887 
       43.82        35.28        35.28        68.91        74.27        66.64 
TCGA-13-0889 TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 
       61.81        69.01        43.36        57.47        56.15        57.07 
TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 
       19.36        47.38        48.33        47.84        44.94        44.84 
TCGA-13-0910 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0920 TCGA-13-0921 
       37.08        34.06        29.98        21.14        13.81         4.64 
TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1408 TCGA-13-1410 
        6.08        10.88         6.61         7.36         5.92         4.70 
TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 
       61.71        29.39        98.04        20.68        22.39        70.82 
TCGA-13-1489 TCGA-13-1491 TCGA-13-1494 TCGA-13-1497 TCGA-13-1498 TCGA-13-1500 
       82.88        52.44        38.17        54.31        37.61        13.97 
TCGA-13-1501 TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 
       32.84         4.21         4.41         4.77         4.14         2.56 
TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 TCGA-13-2059 TCGA-13-2065 TCGA-13-2071 
        3.88         3.09        14.24        12.23         8.75         6.28 
TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1684 TCGA-20-1687 TCGA-23-1023 
       25.94        26.20        72.20        19.07         2.66        40.54 
TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 TCGA-23-1109 
       26.83        31.73        49.41         8.81        29.10        51.35 
TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 
        3.22        31.20        68.68        33.30        86.01       129.96 
TCGA-23-1120 TCGA-23-1121 TCGA-23-1809 TCGA-23-2072 TCGA-23-2078 TCGA-23-2079 
        4.27         6.38         0.53        24.95        87.48        91.66 
TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 
       77.00        49.84         2.76         4.50         7.63        19.63 
TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 TCGA-24-1103 TCGA-24-1104 
       11.64        21.80        41.56         7.66        54.08        63.55 
TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 
       47.41         6.31         6.38         7.86         0.76         6.25 
TCGA-24-1425 TCGA-24-1426 TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 
        5.95         5.36        28.34        19.17        18.67        43.53 
TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 TCGA-24-1470 TCGA-24-1471 
       72.92        12.46        45.14       105.99         3.42         1.18 
TCGA-24-1474 TCGA-24-1545 TCGA-24-1546 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 
       22.19        57.37        64.27        41.06        51.91        41.39 
TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 
       58.09        88.50        70.62        39.88        19.53        44.09 
TCGA-24-1562 TCGA-24-1563 TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 
       45.50        47.70        17.23        90.15        88.34        48.33 
TCGA-24-1842 TCGA-24-1844 TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 
        8.32         3.72         3.81         4.37        11.28         5.75 
TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-1930 TCGA-24-2019 
        9.80        22.65        30.21        16.41        81.11         4.87 
TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 
       44.84        58.16        34.82       109.68        14.43        53.95 
TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2262 
       18.48        28.18        64.01        44.48        57.07         0.36 
TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 
       47.54        31.63        70.45         0.82        67.36        36.23 
TCGA-24-2295 TCGA-24-2297 TCGA-24-2298 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 
       33.11        55.86        53.26        26.93        31.99        51.06 
TCGA-25-1316 TCGA-25-1318 TCGA-25-1319 TCGA-25-1323 TCGA-25-1625 TCGA-25-1630 
       37.02        34.98        65.00        12.00        18.02         7.86 
TCGA-25-1632 TCGA-25-1633 TCGA-25-1870 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 
       56.94        60.59        14.93        85.05        13.02        49.05 
TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 
       38.04         3.02        12.00        19.99        42.02         2.96 
TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1694 
       29.00        30.97        26.96        78.87        44.71        38.53 
TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1705 
        0.79        33.70        31.17        68.28         0.53        18.25 
TCGA-29-1707 TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 TCGA-29-1764 TCGA-29-1768 
       41.95        34.62        17.00        85.68        62.93        31.23 
TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 TCGA-29-1776 TCGA-29-1781 
       22.98        24.36        22.52        17.29        11.84         8.35 
TCGA-29-1784 TCGA-29-2427 TCGA-29-2429 TCGA-29-2431 TCGA-29-2434 TCGA-30-1714 
        5.36        62.47         4.87        42.25        11.47        38.07 
TCGA-30-1718 TCGA-30-1853 TCGA-30-1855 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 
       51.91        36.26         2.47         0.26        48.07        44.91 
TCGA-30-1862 TCGA-30-1867 TCGA-30-1880 TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 
        6.08         1.18        57.57        30.05        48.79        45.57 
TCGA-31-1946 TCGA-31-1951 TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 
       30.18        22.45        42.51        44.09         2.17        28.73 
TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 TCGA-36-2530 
       21.53        22.85        22.55         8.55        30.05        33.01 
TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 
       29.49        29.79        25.91        25.08        23.80        21.60 
TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 TCGA-36-2549 TCGA-42-2582 TCGA-42-2587 
       20.98        18.31        20.52         6.05        26.04        23.74 
TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1584 TCGA-57-1585 
        7.56         7.46        22.39         1.48        21.14         1.74 
TCGA-57-1992 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2354 TCGA-59-2355 
       28.96        80.12        22.32       116.12        34.39         2.14 
TCGA-59-2363 TCGA-61-1721 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1733 
        5.39        11.11        20.94        31.40        18.54        31.76 
TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1743 TCGA-61-1895 
       28.47        48.79        44.84        35.80        43.69         1.41 
TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1906 TCGA-61-1910 
        8.42         5.79        11.41        13.02        34.13        37.02 
TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 
       48.92        56.58        67.73         1.97         5.52        14.50 
TCGA-61-2002 TCGA-61-2008 TCGA-61-2009 TCGA-61-2016 TCGA-61-2017 TCGA-61-2087 
       17.98        30.61        39.85         1.18        45.96         4.80 
TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 
        4.77        51.72        71.74        61.64        58.39        60.62 
TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 TCGA-61-2113 TCGA-61-2613 
        6.48        76.83        20.68        44.52        22.22        31.07 
TCGA-61-2614 
        8.58 

  10P GAIN MUTATED 10P GAIN WILD-TYPE 
              0.30               0.26 
  10P GAIN MUTATED 10P GAIN WILD-TYPE 
            180.16             129.96 
  10P GAIN MUTATED 10P GAIN WILD-TYPE 
             23.54              30.05 
[1] "0.3 - 180.2 (23.5)" "0.3 - 130.0 (30.1)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "10P GAIN MUTATED"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "10P GAIN MUTATED"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "10P GAIN MUTATED"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "10P GAIN MUTATED"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "10P GAIN MUTATED"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-61-2614 
"10P GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "10P GAIN MUTATED"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "10P GAIN MUTATED"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "10P GAIN MUTATED"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "10P GAIN MUTATED"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "10P GAIN MUTATED"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-61-2614 
"10P GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "10P GAIN MUTATED"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "10P GAIN MUTATED"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "10P GAIN MUTATED"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "10P GAIN MUTATED"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "10P GAIN MUTATED"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED"   "10P GAIN MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "10P GAIN MUTATED"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "10P GAIN MUTATED" "10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"10P GAIN WILD-TYPE" "10P GAIN WILD-TYPE"   "10P GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"10P GAIN WILD-TYPE"   "10P GAIN MUTATED" "10P GAIN WILD-TYPE" 
        TCGA-61-2614 
"10P GAIN WILD-TYPE" 
[1] "hr=" "1.1"
D19V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  10P GAIN MUTATED         1   173                2
  10P GAIN WILD-TYPE       1   375                0
D19V3, multiclass
                  clus
vv                 10P GAIN MUTATED 10P GAIN WILD-TYPE
  OMENTUM                         1                  1
  OVARY                         173                375
  PERITONEUM OVARY                2                  0
D19V4, continuous
D19V5, binary
                    cls
clus                   0   1
  10P GAIN MUTATED     2 176
  10P GAIN WILD-TYPE   1 383
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  10P GAIN MUTATED      2  176
  10P GAIN WILD-TYPE    1  383
     clus
vv    10P GAIN MUTATED 10P GAIN WILD-TYPE
  NO                 2                  1
  YES              176                383
                    vv
clus                 R0 R1 R2
  10P GAIN MUTATED    4 11  1
  10P GAIN WILD-TYPE 10 15  1
D19V6, multiclass
    clus
vv   10P GAIN MUTATED 10P GAIN WILD-TYPE
  R0                4                 10
  R1               11                 15
  R2                1                  1

Clustering(20) Variable = 10Q GAIN MUTATION ANALYSIS
D20V1, survival
                    sevent
clus2                  0   1
  10Q GAIN MUTATED    42  57
  10Q GAIN WILD-TYPE 219 229
  10Q GAIN MUTATED 10Q GAIN WILD-TYPE 
                99                448 
  10Q GAIN MUTATED 10Q GAIN WILD-TYPE 
                57                229 
$`10Q GAIN MUTATED`
TCGA-04-1332 TCGA-04-1349 TCGA-04-1350 TCGA-04-1356 TCGA-04-1517 TCGA-04-1530 
       41.00        21.57        63.98        49.28        19.99       119.08 
TCGA-04-1542 TCGA-04-1646 TCGA-04-1652 TCGA-04-1655 TCGA-09-0365 TCGA-09-1659 
       84.20        27.88        31.86        45.34         9.47         9.96 
TCGA-09-1661 TCGA-09-1668 TCGA-09-1670 TCGA-09-1672 TCGA-09-1674 TCGA-09-2055 
       38.43        55.36        17.98         5.85         8.55        26.93 
TCGA-10-0930 TCGA-10-0933 TCGA-13-0727 TCGA-13-0730 TCGA-13-0757 TCGA-13-0762 
       33.24        11.70        15.19        17.79        11.18        32.25 
TCGA-13-0802 TCGA-13-0884 TCGA-13-0885 TCGA-13-0890 TCGA-13-0919 TCGA-13-1477 
        8.19       107.18        91.40        67.99        14.89        54.61 
TCGA-13-1481 TCGA-13-1484 TCGA-13-1495 TCGA-13-1504 TCGA-13-2061 TCGA-20-0990 
       87.06        98.04        49.22        16.57        10.78        25.94 
TCGA-20-1682 TCGA-20-1685 TCGA-23-1021 TCGA-23-1022 TCGA-23-1110 TCGA-23-1123 
       27.48        16.67        47.54        42.51        54.51        33.47 
TCGA-23-1124 TCGA-23-2077 TCGA-23-2643 TCGA-24-1424 TCGA-24-1427 TCGA-24-1428 
       58.13       115.89         4.70         6.02         4.80        17.36 
TCGA-24-1548 TCGA-24-1549 TCGA-24-1564 TCGA-24-1616 TCGA-24-2020 TCGA-24-2261 
       16.21        56.58        25.87        38.24       151.99         0.79 
TCGA-24-2293 TCGA-25-1312 TCGA-25-1317 TCGA-25-1318 TCGA-25-1321 TCGA-25-1623 
       16.64         1.02         1.02        34.98        33.96        18.58 
TCGA-25-1626 TCGA-25-1631 TCGA-25-1634 TCGA-25-1877 TCGA-25-2392 TCGA-29-1702 
       15.78         0.30        35.54        18.05         1.02        18.64 
TCGA-29-1710 TCGA-29-1763 TCGA-29-1777 TCGA-29-1783 TCGA-29-2425 TCGA-29-2428 
       29.23        66.77        12.30         7.20        65.00        45.11 
TCGA-29-2432 TCGA-29-2436 TCGA-30-1861 TCGA-30-1866 TCGA-31-1950 TCGA-36-1578 
       11.84         9.76        34.78        36.62        18.77        27.85 
TCGA-36-1580 TCGA-36-2529 TCGA-36-2548 TCGA-36-2552 TCGA-57-1582 TCGA-57-1583 
       24.23        35.05        14.17        11.47        24.03        11.38 
TCGA-57-1994 TCGA-59-2352 TCGA-59-2372 TCGA-61-1722 TCGA-61-1730 TCGA-61-1741 
       25.02         9.40        44.78         8.05         4.34        33.67 
TCGA-61-1904 TCGA-61-1907 TCGA-61-1915 TCGA-61-1919 TCGA-61-2003 TCGA-61-2098 
        9.07        31.30        67.73        38.17         3.98        65.49 
TCGA-61-2101 TCGA-61-2111 TCGA-61-2612 
       55.50       125.72         6.35 

$`10Q GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 TCGA-04-1342 
       40.24         1.81        49.15         2.01        46.62        18.51 
TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1351 TCGA-04-1361 
       11.87        65.49        63.06        48.76        65.46        32.52 
TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 
       44.32        33.67        76.54        71.47        82.36        56.55 
TCGA-04-1516 TCGA-04-1525 TCGA-04-1536 TCGA-04-1638 TCGA-04-1644 TCGA-04-1648 
       41.59        38.37        29.06        55.40        48.89        28.64 
TCGA-04-1649 TCGA-04-1651 TCGA-04-1654 TCGA-09-0364 TCGA-09-0366 TCGA-09-0367 
       64.64        36.23        47.70        29.16        57.73        17.95 
TCGA-09-0369 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 
       35.54        89.33        74.89        41.59        57.57        61.87 
TCGA-09-1669 TCGA-09-1673 TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 
       30.48         3.02        97.55         6.15         6.12        35.15 
TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 
        4.50       112.37        71.11        63.09        39.75        20.91 
TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0931 
       12.46        54.31        25.91        81.47        18.48        32.28 
TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 
        3.88        35.41        35.80        15.12        19.86         6.21 
TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 
       24.59        44.55        39.58         2.73        12.39        31.07 
TCGA-13-0751 TCGA-13-0755 TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 TCGA-13-0764 
       55.17         2.47        11.38        11.54        34.06        31.04 
TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 
       21.40         8.42        38.93        36.72        28.70        30.35 
TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 TCGA-13-0803 
       19.56         8.71         7.79         8.12         8.28        43.82 
TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0886 TCGA-13-0887 
       35.28        35.28        13.61        68.91        74.27        66.64 
TCGA-13-0888 TCGA-13-0889 TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 TCGA-13-0899 
       70.39        61.81        69.01        43.36        57.47        56.15 
TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 
       57.07        19.36        47.38        48.33        47.84        44.94 
TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 
       44.84        37.08        27.68        34.06        29.98        21.14 
TCGA-13-0920 TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 
       13.81         4.64         6.41         6.08        10.88         6.61 
TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 TCGA-13-1411 
        7.36         6.05         5.92         6.84         4.70         4.21 
TCGA-13-1412 TCGA-13-1482 TCGA-13-1483 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 
        5.33        61.71        29.39        20.68        22.39        70.82 
TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1496 TCGA-13-1497 
       82.88        52.44        73.55        38.17         4.24        54.31 
TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1505 TCGA-13-1506 
       37.61        38.37        13.97        32.84         4.21         4.41 
TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 
        4.77         4.14         2.56         3.88         3.09        14.24 
TCGA-13-2059 TCGA-13-2060 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 TCGA-20-0991 
       12.23         8.58         8.75         6.28        23.05        26.20 
TCGA-20-0996 TCGA-20-1683 TCGA-20-1684 TCGA-20-1686 TCGA-20-1687 TCGA-23-1023 
       72.20        25.38        19.07         2.93         2.66        40.54 
TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 
       15.39        26.83        31.73        49.41         8.81        29.10 
TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 
       18.87         2.24        51.35         3.22        31.20        68.68 
TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 
        4.57        33.30        86.01       129.96         4.27         6.38 
TCGA-23-1122 TCGA-23-1809 TCGA-23-2072 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 
       39.09         0.53        24.95        87.48        91.66        77.00 
TCGA-23-2084 TCGA-23-2641 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 
       49.84         2.76         4.50         7.63        19.63        11.64 
TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 
       21.80        41.56         7.66        22.32        54.08        63.55 
TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 
       47.41         6.31         6.38         7.82         7.99         7.86 
TCGA-24-1422 TCGA-24-1423 TCGA-24-1425 TCGA-24-1426 TCGA-24-1430 TCGA-24-1431 
        0.76         6.25         5.95         5.36        28.34        19.17 
TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 
       18.67        43.53         8.55        72.92        12.46        45.14 
TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 
      105.99         9.11         3.42         1.18        22.19        26.96 
TCGA-24-1545 TCGA-24-1546 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 
       57.37        64.27        41.06        51.91        41.39        58.09 
TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 
       88.50        70.62        39.88        19.53        44.09        45.50 
TCGA-24-1563 TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 
       47.70        10.26        17.23        90.15        88.34        48.33 
TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 
        8.32         3.48         3.72         3.81         4.37        11.28 
TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 
        5.75         5.49         9.80        22.65        30.21        16.41 
TCGA-24-1928 TCGA-24-1930 TCGA-24-2019 TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 
       11.05        81.11         4.87        44.84        58.16        34.82 
TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 
      109.68        14.43        53.95        18.48        28.18        64.01 
TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 
       44.48        57.07        36.16         0.36        47.54        31.63 
TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2295 
       70.45        44.58         0.82        67.36        36.23        33.11 
TCGA-24-2297 TCGA-24-2298 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 
       55.86        53.26        26.93        31.99        51.06        37.02 
TCGA-25-1319 TCGA-25-1320 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 TCGA-25-1625 
       65.00        36.95         2.99        12.00         2.96        18.02 
TCGA-25-1627 TCGA-25-1628 TCGA-25-1630 TCGA-25-1632 TCGA-25-1633 TCGA-25-1635 
        0.36        20.58         7.86        56.94        60.59        51.22 
TCGA-25-1870 TCGA-25-1871 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2393 
       14.93        24.99        85.05        13.02        49.05        38.04 
TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 
        3.02        12.00        45.01        19.99        42.02         2.96 
TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 
       29.00        30.97        26.96        78.87        44.71        47.18 
TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 
      101.75        38.53         0.79        33.70        31.17        68.28 
TCGA-29-1699 TCGA-29-1701 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1711 
        0.53        16.90        59.67        18.25        41.95        34.62 
TCGA-29-1761 TCGA-29-1762 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 
       17.00        85.68        62.93        39.09        31.23        22.98 
TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 TCGA-29-1776 TCGA-29-1778 
       24.36        22.52        17.29        12.36        11.84        14.93 
TCGA-29-1781 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 TCGA-29-2427 TCGA-29-2429 
        8.35         5.36        34.62        86.17        62.47         4.87 
TCGA-29-2431 TCGA-29-2434 TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 TCGA-30-1855 
       42.25        11.47        38.07        51.91        36.26         2.47 
TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 TCGA-30-1862 TCGA-30-1867 
       15.68         0.26        48.07        44.91         6.08         1.18 
TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 
       57.57        24.26        30.05        48.79        45.57        30.18 
TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 
       22.45         6.71        42.51        44.09         2.17        28.73 
TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 
       29.06        21.53        22.85        22.55         8.55        30.05 
TCGA-36-1577 TCGA-36-1581 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 
       25.74        24.69        33.01        29.49        29.79        25.91 
TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 
       25.08        23.80        21.60         2.24        20.98        18.31 
TCGA-36-2547 TCGA-36-2549 TCGA-36-2551 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 
       20.52         6.05        16.14        26.04        23.74         9.44 
TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1584 TCGA-57-1585 
        7.56         7.46        22.39         1.48        21.14         1.74 
TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 
       22.32        28.96        25.05       180.16        80.12        22.32 
TCGA-59-2351 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-61-1721 TCGA-61-1724 
      116.12        34.39         2.14         5.39        11.11        20.94 
TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 
       31.40        18.54        27.88        31.76        28.47        48.79 
TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1743 TCGA-61-1895 TCGA-61-1899 
       44.84        35.80         2.43        43.69         1.41         8.42 
TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1906 TCGA-61-1910 TCGA-61-1911 
        5.79        11.41        13.02        34.13        37.02        42.48 
TCGA-61-1913 TCGA-61-1914 TCGA-61-1917 TCGA-61-1918 TCGA-61-1995 TCGA-61-1998 
       48.92        56.58        43.43        15.75         1.97         5.52 
TCGA-61-2000 TCGA-61-2002 TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 
       14.50        17.98        30.61        39.85        30.64         1.18 
TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 
       45.96        45.40         4.80         4.77        51.72        71.74 
TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 
       61.64        58.39        60.62         6.48        76.83        20.68 
TCGA-61-2110 TCGA-61-2113 TCGA-61-2613 TCGA-61-2614 
       44.52        22.22        31.07         8.58 

  10Q GAIN MUTATED 10Q GAIN WILD-TYPE 
              0.30               0.26 
  10Q GAIN MUTATED 10Q GAIN WILD-TYPE 
            151.99             180.16 
  10Q GAIN MUTATED 10Q GAIN WILD-TYPE 
            25.940             28.715 
[1] "0.3 - 152.0 (25.9)" "0.3 - 180.2 (28.7)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "10Q GAIN MUTATED"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "10Q GAIN MUTATED"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
  "10Q GAIN MUTATED"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED"   "10Q GAIN MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "10Q GAIN MUTATED"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "10Q GAIN MUTATED"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"10Q GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "10Q GAIN MUTATED"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "10Q GAIN MUTATED"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
  "10Q GAIN MUTATED"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED"   "10Q GAIN MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "10Q GAIN MUTATED"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "10Q GAIN MUTATED"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"10Q GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "10Q GAIN MUTATED"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "10Q GAIN MUTATED"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
  "10Q GAIN MUTATED"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED"   "10Q GAIN MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "10Q GAIN MUTATED"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "10Q GAIN MUTATED"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"10Q GAIN WILD-TYPE" "10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"10Q GAIN WILD-TYPE"   "10Q GAIN MUTATED" "10Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"10Q GAIN WILD-TYPE" 
[1] "hr=" "1"  
D20V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  10Q GAIN MUTATED         1    98                1
  10Q GAIN WILD-TYPE       1   450                1
D20V3, multiclass
                  clus
vv                 10Q GAIN MUTATED 10Q GAIN WILD-TYPE
  OMENTUM                         1                  1
  OVARY                          98                450
  PERITONEUM OVARY                1                  1
D20V4, continuous
D20V5, binary
                    cls
clus                   0   1
  10Q GAIN MUTATED     0 101
  10Q GAIN WILD-TYPE   3 458
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  10Q GAIN MUTATED      0  101
  10Q GAIN WILD-TYPE    3  458
     clus
vv    10Q GAIN MUTATED 10Q GAIN WILD-TYPE
  NO                 0                  3
  YES              101                458
                    vv
clus                 R0 R1 R2
  10Q GAIN MUTATED    3  6  0
  10Q GAIN WILD-TYPE 11 20  2
D20V6, multiclass
    clus
vv   10Q GAIN MUTATED 10Q GAIN WILD-TYPE
  R0                3                 11
  R1                6                 20
  R2                0                  2

Clustering(21) Variable = 11P GAIN MUTATION ANALYSIS
D21V1, survival
                    sevent
clus2                  0   1
  11P GAIN MUTATED    38  32
  11P GAIN WILD-TYPE 223 254
  11P GAIN MUTATED 11P GAIN WILD-TYPE 
                70                477 
  11P GAIN MUTATED 11P GAIN WILD-TYPE 
                32                254 
$`11P GAIN MUTATED`
TCGA-04-1343 TCGA-04-1346 TCGA-04-1350 TCGA-04-1361 TCGA-09-2043 TCGA-09-2051 
       11.87        65.49        63.98        32.52         6.15        63.09 
TCGA-10-0931 TCGA-13-0724 TCGA-13-0727 TCGA-13-0795 TCGA-13-0797 TCGA-13-0885 
       32.28         2.73        15.19        19.56         8.71        91.40 
TCGA-13-0887 TCGA-13-0888 TCGA-13-0890 TCGA-13-1407 TCGA-13-1410 TCGA-13-1484 
       66.64        70.39        67.99         6.05         4.70        98.04 
TCGA-13-1497 TCGA-13-1499 TCGA-13-2057 TCGA-23-1021 TCGA-23-1024 TCGA-23-1026 
       54.31        38.37        14.24        47.54        15.39        26.83 
TCGA-23-1029 TCGA-23-1030 TCGA-23-1109 TCGA-23-1111 TCGA-23-1116 TCGA-23-1119 
        8.81        29.10        51.35         3.22         4.57       129.96 
TCGA-23-2072 TCGA-23-2084 TCGA-23-2645 TCGA-24-1417 TCGA-24-1434 TCGA-24-1436 
       24.95        49.84         4.50         7.82        18.67         8.55 
TCGA-24-1551 TCGA-24-1556 TCGA-24-1564 TCGA-24-1604 TCGA-24-1844 TCGA-24-1850 
       51.91        70.62        25.87        88.34         3.72         5.49 
TCGA-24-1928 TCGA-24-2030 TCGA-25-1312 TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 
       11.05        53.95         1.02        36.95        33.96         2.99 
TCGA-25-1635 TCGA-25-1877 TCGA-25-2400 TCGA-29-1691 TCGA-29-1701 TCGA-29-1774 
       51.22        18.05        42.02        47.18        16.90        17.29 
TCGA-29-1775 TCGA-29-1783 TCGA-30-1855 TCGA-30-1857 TCGA-30-1859 TCGA-30-1862 
       12.36         7.20         2.47         0.26        48.07         6.08 
TCGA-36-1574 TCGA-36-1576 TCGA-36-1578 TCGA-42-2587 TCGA-59-2348 TCGA-59-2351 
       22.55        30.05        27.85        23.74       180.16       116.12 
TCGA-61-1740 TCGA-61-1907 TCGA-61-1915 TCGA-61-2097 
        2.43        31.30        67.73        60.62 

$`11P GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 TCGA-04-1351 TCGA-04-1356 
       18.51        63.06        48.76        21.57        65.46        49.28 
TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 
       44.32        33.67        76.54        71.47        82.36        56.55 
TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 TCGA-04-1530 TCGA-04-1536 TCGA-04-1542 
       41.59        19.99        38.37       119.08        29.06        84.20 
TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 
       55.40        48.89        27.88        28.64        64.64        36.23 
TCGA-04-1652 TCGA-04-1654 TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 
       31.86        47.70        45.34        29.16         9.47        57.73 
TCGA-09-0367 TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 
       17.95        35.54         9.96        38.43        89.33        74.89 
TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 
       41.59        57.57        61.87        55.36        30.48        17.98 
TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 TCGA-09-2044 TCGA-09-2045 
        5.85         3.02         8.55        97.55         6.12        35.15 
TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 
        4.50       112.37        71.11        39.75        20.91        26.93 
TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 
       12.46        54.31        25.91        81.47        18.48        33.24 
TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 
       11.70         3.88        35.41        35.80        15.12        19.86 
TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0725 TCGA-13-0726 
        6.21        24.59        44.55        39.58        12.39        31.07 
TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 
       17.79        55.17         2.47        11.18        11.38        11.54 
TCGA-13-0761 TCGA-13-0762 TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 
       34.06        32.25        31.04        21.40         8.42        38.93 
TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 
       36.72        28.70        30.35         7.79         8.12         8.28 
TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 
        8.19        43.82        35.28        35.28        13.61        68.91 
TCGA-13-0884 TCGA-13-0886 TCGA-13-0889 TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 
      107.18        74.27        61.81        69.01        43.36        57.47 
TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 
       56.15        57.07        19.36        47.38        48.33        47.84 
TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 
       44.94        44.84        37.08        27.68        34.06        29.98 
TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 
       21.14        14.89        13.81         4.64         6.41         6.08 
TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1408 TCGA-13-1409 TCGA-13-1411 
       10.88         6.61         7.36         5.92         6.84         4.21 
TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1485 
        5.33        54.61        87.06        61.71        29.39        20.68 
TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 
       22.39        70.82        82.88        52.44        73.55        38.17 
TCGA-13-1495 TCGA-13-1496 TCGA-13-1498 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 
       49.22         4.24        37.61        13.97        32.84        16.57 
TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 
        4.21         4.41         4.77         4.14         2.56         3.88 
TCGA-13-1512 TCGA-13-2059 TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 
        3.09        12.23         8.58        10.78         8.75         6.28 
TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 TCGA-20-1683 
       23.05        25.94        26.20        72.20        27.48        25.38 
TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1022 TCGA-23-1023 
       19.07        16.67         2.93         2.66        42.51        40.54 
TCGA-23-1027 TCGA-23-1028 TCGA-23-1031 TCGA-23-1032 TCGA-23-1110 TCGA-23-1113 
       31.73        49.41        18.87         2.24        54.51        31.20 
TCGA-23-1114 TCGA-23-1117 TCGA-23-1118 TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 
       68.68        33.30        86.01         4.27         6.38        39.09 
TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 
       33.47        58.13         0.53       115.89        87.48        91.66 
TCGA-23-2081 TCGA-23-2641 TCGA-23-2643 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 
       77.00         2.76         4.70         7.63        19.63        11.64 
TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 
       21.80        41.56         7.66        22.32        54.08        63.55 
TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 
       47.41         6.31         6.38         7.99         7.86         0.76 
TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 
        6.25         6.02         5.95         5.36         4.80        17.36 
TCGA-24-1430 TCGA-24-1431 TCGA-24-1435 TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 
       28.34        19.17        43.53        72.92        12.46        45.14 
TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 
      105.99         9.11         3.42         1.18        22.19        26.96 
TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1552 
       57.37        64.27        16.21        56.58        41.06        41.39 
TCGA-24-1553 TCGA-24-1555 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 
       58.09        88.50        39.88        19.53        44.09        45.50 
TCGA-24-1563 TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1614 TCGA-24-1616 
       47.70        10.26        17.23        90.15        48.33        38.24 
TCGA-24-1842 TCGA-24-1843 TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 
        8.32         3.48         3.81         4.37        11.28         5.75 
TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-1930 TCGA-24-2019 
        9.80        22.65        30.21        16.41        81.11         4.87 
TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 
      151.99        44.84        58.16        34.82       109.68        14.43 
TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 
       18.48        28.18        64.01        44.48        57.07        36.16 
TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 
        0.79         0.36        47.54        31.63        70.45        44.58 
TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 
        0.82        67.36        36.23        16.64        33.11        55.86 
TCGA-24-2298 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 
       53.26        26.93        31.99        51.06        37.02         1.02 
TCGA-25-1318 TCGA-25-1319 TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 
       34.98        65.00        12.00         2.96        18.58        18.02 
TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 
       15.78         0.36        20.58         7.86         0.30        56.94 
TCGA-25-1633 TCGA-25-1634 TCGA-25-1870 TCGA-25-1871 TCGA-25-1878 TCGA-25-2042 
       60.59        35.54        14.93        24.99        85.05        13.02 
TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 
       49.05         1.02        38.04         3.02        12.00        45.01 
TCGA-25-2399 TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 
       19.99         2.96        29.00        30.97        26.96        78.87 
TCGA-29-1690 TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 
       44.71       101.75        38.53         0.79        33.70        31.17 
TCGA-29-1698 TCGA-29-1699 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 
       68.28         0.53        18.64        59.67        18.25        41.95 
TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 
       29.23        34.62        17.00        85.68        66.77        62.93 
TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 TCGA-29-1776 
       39.09        31.23        22.98        24.36        22.52        11.84 
TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 
       12.30        14.93         8.35         5.36        34.62        86.17 
TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 
       65.00        62.47        45.11         4.87        42.25        11.84 
TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 TCGA-30-1856 
       11.47         9.76        38.07        51.91        36.26        15.68 
TCGA-30-1860 TCGA-30-1861 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 
       44.91        34.78        36.62         1.18        57.57        24.26 
TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 
       30.05        48.79        45.57        30.18        18.77        22.45 
TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1569 
        6.71        42.51        44.09         2.17        28.73        29.06 
TCGA-36-1570 TCGA-36-1571 TCGA-36-1575 TCGA-36-1577 TCGA-36-1580 TCGA-36-1581 
       21.53        22.85         8.55        25.74        24.23        24.69 
TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 
       35.05        33.01        29.49        29.79        25.91        25.08 
TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 
       23.80        21.60         2.24        20.98        18.31        20.52 
TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 TCGA-36-2552 TCGA-42-2582 TCGA-42-2588 
       14.17         6.05        16.14        11.47        26.04         9.44 
TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 
        7.56         7.46        22.39         1.48        24.03        11.38 
TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 
       21.14         1.74        22.32        28.96        25.05        25.02 
TCGA-59-2349 TCGA-59-2350 TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 
       80.12        22.32         9.40        34.39         2.14         5.39 
TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 
       44.78        11.11         8.05        20.94        31.40        18.54 
TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 
       27.88         4.34        31.76        28.47        48.79        44.84 
TCGA-61-1738 TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 
       35.80        33.67        43.69         1.41         8.42         5.79 
TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 TCGA-61-1910 TCGA-61-1911 
       11.41        13.02         9.07        34.13        37.02        42.48 
TCGA-61-1913 TCGA-61-1914 TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 TCGA-61-1995 
       48.92        56.58        43.43        15.75        38.17         1.97 
TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 TCGA-61-2009 
        5.52        14.50        17.98         3.98        30.61        39.85 
TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 
       30.64         1.18        45.96        45.40         4.80         4.77 
TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2098 TCGA-61-2101 
       51.72        71.74        61.64        58.39        65.49        55.50 
TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 
        6.48        76.83        20.68        44.52       125.72        22.22 
TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
        6.35        31.07         8.58 

  11P GAIN MUTATED 11P GAIN WILD-TYPE 
              0.26               0.30 
  11P GAIN MUTATED 11P GAIN WILD-TYPE 
            180.16             151.99 
  11P GAIN MUTATED 11P GAIN WILD-TYPE 
             26.35              28.47 
[1] "0.3 - 180.2 (26.4)" "0.3 - 152.0 (28.5)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED"   "11P GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "11P GAIN MUTATED"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED"   "11P GAIN MUTATED" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "11P GAIN MUTATED"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED"   "11P GAIN MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "11P GAIN MUTATED"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2614 
"11P GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED"   "11P GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "11P GAIN MUTATED"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED"   "11P GAIN MUTATED" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "11P GAIN MUTATED"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED"   "11P GAIN MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "11P GAIN MUTATED"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2614 
"11P GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED"   "11P GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "11P GAIN MUTATED"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED"   "11P GAIN MUTATED" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "11P GAIN MUTATED"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED"   "11P GAIN MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "11P GAIN MUTATED"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "11P GAIN MUTATED" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE"   "11P GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"11P GAIN WILD-TYPE"   "11P GAIN MUTATED" "11P GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2614 
"11P GAIN WILD-TYPE" 
[1] "hr=" "1.4"
D21V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  11P GAIN MUTATED         0    71                0
  11P GAIN WILD-TYPE       2   477                2
D21V3, multiclass
                  clus
vv                 11P GAIN MUTATED 11P GAIN WILD-TYPE
  OMENTUM                         0                  2
  OVARY                          71                477
  PERITONEUM OVARY                0                  2
D21V4, continuous
D21V5, binary
                    cls
clus                   0   1
  11P GAIN MUTATED     0  71
  11P GAIN WILD-TYPE   3 488
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  11P GAIN MUTATED      0   71
  11P GAIN WILD-TYPE    3  488
     clus
vv    11P GAIN MUTATED 11P GAIN WILD-TYPE
  NO                 0                  3
  YES               71                488
                    vv
clus                 R0 R1 R2
  11P GAIN MUTATED    0  1  0
  11P GAIN WILD-TYPE 14 25  2
D21V6, multiclass
[1] "Remove cluster labels:" "11P GAIN MUTATED"      
clus
  11P GAIN MUTATED 11P GAIN WILD-TYPE 
                 1                 41 
        TCGA-04-1516         TCGA-04-1644         TCGA-13-0807 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-24-2033         TCGA-29-2414 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-2425         TCGA-29-2427         TCGA-29-2428 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-2429         TCGA-29-2431         TCGA-29-2432 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-29-2434         TCGA-29-2436         TCGA-36-2529 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2530         TCGA-36-2532         TCGA-36-2534 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2537         TCGA-36-2538         TCGA-36-2540 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2542         TCGA-36-2543         TCGA-36-2544 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2545         TCGA-36-2547         TCGA-36-2548 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-36-2549         TCGA-36-2551         TCGA-36-2552 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-42-2582         TCGA-42-2588         TCGA-42-2589 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-42-2590         TCGA-42-2593         TCGA-57-1993 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-59-2363         TCGA-59-2372         TCGA-61-2612 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 
        TCGA-61-2613         TCGA-61-2614 
"11P GAIN WILD-TYPE" "11P GAIN WILD-TYPE" 

Clustering(22) Variable = 11Q GAIN MUTATION ANALYSIS
D22V1, survival
                    sevent
clus2                  0   1
  11Q GAIN MUTATED    48  52
  11Q GAIN WILD-TYPE 213 234
  11Q GAIN MUTATED 11Q GAIN WILD-TYPE 
               100                447 
  11Q GAIN MUTATED 11Q GAIN WILD-TYPE 
                52                234 
$`11Q GAIN MUTATED`
TCGA-04-1343 TCGA-04-1346 TCGA-04-1350 TCGA-04-1361 TCGA-04-1646 TCGA-04-1652 
       11.87        65.49        63.98        32.52        27.88        31.86 
TCGA-09-1659 TCGA-09-1661 TCGA-09-1667 TCGA-09-1668 TCGA-10-0931 TCGA-13-0726 
        9.96        38.43        61.87        55.36        32.28        31.07 
TCGA-13-0764 TCGA-13-0797 TCGA-13-0885 TCGA-13-0887 TCGA-13-0890 TCGA-13-0893 
       31.04         8.71        91.40        66.64        67.99        43.36 
TCGA-13-0897 TCGA-13-1407 TCGA-13-1410 TCGA-13-1412 TCGA-13-1484 TCGA-13-1487 
       57.47         6.05         4.70         5.33        98.04        22.39 
TCGA-13-1497 TCGA-13-1499 TCGA-13-1506 TCGA-13-2057 TCGA-20-1685 TCGA-20-1687 
       54.31        38.37         4.41        14.24        16.67         2.66 
TCGA-23-1021 TCGA-23-1022 TCGA-23-1024 TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 
       47.54        42.51        15.39         8.81        29.10        18.87 
TCGA-23-1032 TCGA-23-1109 TCGA-23-1111 TCGA-23-1119 TCGA-23-2072 TCGA-23-2084 
        2.24        51.35         3.22       129.96        24.95        49.84 
TCGA-23-2643 TCGA-23-2645 TCGA-24-1417 TCGA-24-1427 TCGA-24-1428 TCGA-24-1431 
        4.70         4.50         7.82         4.80        17.36        19.17 
TCGA-24-1434 TCGA-24-1436 TCGA-24-1551 TCGA-24-1556 TCGA-24-1558 TCGA-24-1563 
       18.67         8.55        51.91        70.62        19.53        47.70 
TCGA-24-1564 TCGA-24-1604 TCGA-24-1616 TCGA-24-1844 TCGA-24-1845 TCGA-24-1850 
       25.87        88.34        38.24         3.72         3.81         5.49 
TCGA-24-1928 TCGA-24-2027 TCGA-24-2033 TCGA-25-1312 TCGA-25-1322 TCGA-25-1630 
       11.05       109.68        18.48         1.02         2.99         7.86 
TCGA-25-1631 TCGA-25-1635 TCGA-25-1877 TCGA-25-1878 TCGA-25-2400 TCGA-29-1691 
        0.30        51.22        18.05        85.05        42.02        47.18 
TCGA-29-1701 TCGA-29-1702 TCGA-29-1763 TCGA-29-1764 TCGA-29-1774 TCGA-29-1783 
       16.90        18.64        66.77        62.93        17.29         7.20 
TCGA-29-2425 TCGA-29-2429 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1862 
       65.00         4.87         2.47        15.68         0.26         6.08 
TCGA-36-1574 TCGA-36-1576 TCGA-36-1578 TCGA-36-2551 TCGA-42-2587 TCGA-57-1584 
       22.55        30.05        27.85        16.14        23.74        21.14 
TCGA-59-2351 TCGA-61-1722 TCGA-61-1740 TCGA-61-1906 TCGA-61-1907 TCGA-61-1915 
      116.12         8.05         2.43        34.13        31.30        67.73 
TCGA-61-1918 TCGA-61-2097 TCGA-61-2109 TCGA-61-2612 
       15.75        60.62        20.68         6.35 

$`11Q GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 TCGA-04-1351 TCGA-04-1356 
       18.51        63.06        48.76        21.57        65.46        49.28 
TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 
       44.32        33.67        76.54        71.47        82.36        56.55 
TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 TCGA-04-1530 TCGA-04-1536 TCGA-04-1542 
       41.59        19.99        38.37       119.08        29.06        84.20 
TCGA-04-1638 TCGA-04-1644 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1654 
       55.40        48.89        28.64        64.64        36.23        47.70 
TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 
       45.34        29.16         9.47        57.73        17.95        35.54 
TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1669 TCGA-09-1670 
       89.33        74.89        41.59        57.57        30.48        17.98 
TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 
        5.85         3.02         8.55        97.55         6.15         6.12 
TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 
       35.15         4.50       112.37        71.11        63.09        39.75 
TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 
       20.91        26.93        12.46        54.31        25.91        81.47 
TCGA-10-0928 TCGA-10-0930 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 
       18.48        33.24        11.70         3.88        35.41        35.80 
TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 
       15.12        19.86         6.21        24.59        44.55        39.58 
TCGA-13-0724 TCGA-13-0725 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 
        2.73        12.39        15.19        17.79        55.17         2.47 
TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 TCGA-13-0762 TCGA-13-0766 
       11.18        11.38        11.54        34.06        32.25        21.40 
TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 
        8.42        38.93        36.72        28.70        30.35        19.56 
TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 
        7.79         8.12         8.28         8.19        43.82        35.28 
TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 TCGA-13-0886 TCGA-13-0888 
       35.28        13.61        68.91       107.18        74.27        70.39 
TCGA-13-0889 TCGA-13-0891 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 
       61.81        69.01        56.15        57.07        19.36        47.38 
TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 
       48.33        47.84        44.94        44.84        37.08        27.68 
TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 TCGA-13-0921 
       34.06        29.98        21.14        14.89        13.81         4.64 
TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1408 
        6.41         6.08        10.88         6.61         7.36         5.92 
TCGA-13-1409 TCGA-13-1411 TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 
        6.84         4.21        54.61        87.06        61.71        29.39 
TCGA-13-1485 TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 
       20.68        70.82        82.88        52.44        73.55        38.17 
TCGA-13-1495 TCGA-13-1496 TCGA-13-1498 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 
       49.22         4.24        37.61        13.97        32.84        16.57 
TCGA-13-1505 TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 
        4.21         4.77         4.14         2.56         3.88         3.09 
TCGA-13-2059 TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 
       12.23         8.58        10.78         8.75         6.28        23.05 
TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 
       25.94        26.20        72.20        27.48        25.38        19.07 
TCGA-20-1686 TCGA-23-1023 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1110 
        2.93        40.54        26.83        31.73        49.41        54.51 
TCGA-23-1113 TCGA-23-1114 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1120 
       31.20        68.68         4.57        33.30        86.01         4.27 
TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 TCGA-23-2077 
        6.38        39.09        33.47        58.13         0.53       115.89 
TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2641 TCGA-24-0966 TCGA-24-0968 
       87.48        91.66        77.00         2.76         7.63        19.63 
TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 
       11.64        21.80        41.56         7.66        22.32        54.08 
TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1418 TCGA-24-1419 
       63.55        47.41         6.31         6.38         7.99         7.86 
TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 TCGA-24-1426 TCGA-24-1430 
        0.76         6.25         6.02         5.95         5.36        28.34 
TCGA-24-1435 TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 TCGA-24-1469 
       43.53        72.92        12.46        45.14       105.99         9.11 
TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 
        3.42         1.18        22.19        26.96        57.37        64.27 
TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 
       16.21        56.58        41.06        41.39        58.09        88.50 
TCGA-24-1557 TCGA-24-1560 TCGA-24-1562 TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 
       39.88        44.09        45.50        10.26        17.23        90.15 
TCGA-24-1614 TCGA-24-1842 TCGA-24-1843 TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 
       48.33         8.32         3.48         4.37        11.28         5.75 
TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-1930 TCGA-24-2019 
        9.80        22.65        30.21        16.41        81.11         4.87 
TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2029 TCGA-24-2030 
      151.99        44.84        58.16        34.82        14.43        53.95 
TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 
       28.18        64.01        44.48        57.07        36.16         0.79 
TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 
        0.36        47.54        31.63        70.45        44.58         0.82 
TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 TCGA-24-2298 
       67.36        36.23        16.64        33.11        55.86        53.26 
TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 
       26.93        31.99        51.06        37.02         1.02        34.98 
TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 
       65.00        36.95        33.96        12.00         2.96        18.58 
TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 TCGA-25-1632 TCGA-25-1633 
       18.02        15.78         0.36        20.58        56.94        60.59 
TCGA-25-1634 TCGA-25-1870 TCGA-25-1871 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 
       35.54        14.93        24.99        13.02        49.05         1.02 
TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2401 
       38.04         3.02        12.00        45.01        19.99         2.96 
TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1693 
       29.00        30.97        26.96        78.87        44.71       101.75 
TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 
       38.53         0.79        33.70        31.17        68.28         0.53 
TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 
       59.67        18.25        41.95        29.23        34.62        17.00 
TCGA-29-1762 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 
       85.68        39.09        31.23        22.98        24.36        22.52 
TCGA-29-1775 TCGA-29-1776 TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 TCGA-29-1784 
       12.36        11.84        12.30        14.93         8.35         5.36 
TCGA-29-1785 TCGA-29-2414 TCGA-29-2427 TCGA-29-2428 TCGA-29-2431 TCGA-29-2432 
       34.62        86.17        62.47        45.11        42.25        11.84 
TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 TCGA-30-1859 
       11.47         9.76        38.07        51.91        36.26        48.07 
TCGA-30-1860 TCGA-30-1861 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 
       44.91        34.78        36.62         1.18        57.57        24.26 
TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 
       30.05        48.79        45.57        30.18        18.77        22.45 
TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1569 
        6.71        42.51        44.09         2.17        28.73        29.06 
TCGA-36-1570 TCGA-36-1571 TCGA-36-1575 TCGA-36-1577 TCGA-36-1580 TCGA-36-1581 
       21.53        22.85         8.55        25.74        24.23        24.69 
TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 
       35.05        33.01        29.49        29.79        25.91        25.08 
TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 
       23.80        21.60         2.24        20.98        18.31        20.52 
TCGA-36-2548 TCGA-36-2549 TCGA-36-2552 TCGA-42-2582 TCGA-42-2588 TCGA-42-2589 
       14.17         6.05        11.47        26.04         9.44         7.56 
TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 TCGA-57-1585 
        7.46        22.39         1.48        24.03        11.38         1.74 
TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 
       22.32        28.96        25.05        25.02       180.16        80.12 
TCGA-59-2350 TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 
       22.32         9.40        34.39         2.14         5.39        44.78 
TCGA-61-1721 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 TCGA-61-1730 
       11.11        20.94        31.40        18.54        27.88         4.34 
TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1741 
       31.76        28.47        48.79        44.84        35.80        33.67 
TCGA-61-1743 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 
       43.69         1.41         8.42         5.79        11.41        13.02 
TCGA-61-1904 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1917 
        9.07        37.02        42.48        48.92        56.58        43.43 
TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 
       38.17         1.97         5.52        14.50        17.98         3.98 
TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 
       30.61        39.85        30.64         1.18        45.96        45.40 
TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 
        4.80         4.77        51.72        71.74        61.64        58.39 
TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2110 TCGA-61-2111 
       65.49        55.50         6.48        76.83        44.52       125.72 
TCGA-61-2113 TCGA-61-2613 TCGA-61-2614 
       22.22        31.07         8.58 

  11Q GAIN MUTATED 11Q GAIN WILD-TYPE 
              0.26               0.36 
  11Q GAIN MUTATED 11Q GAIN WILD-TYPE 
            129.96             180.16 
  11Q GAIN MUTATED 11Q GAIN WILD-TYPE 
            21.765             29.000 
[1] "0.3 - 130.0 (21.8)" "0.4 - 180.2 (29.0)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED"   "11Q GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED"   "11Q GAIN MUTATED" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED"   "11Q GAIN MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED"   "11Q GAIN MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED"   "11Q GAIN MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED"   "11Q GAIN MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED"   "11Q GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"11Q GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED"   "11Q GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED"   "11Q GAIN MUTATED" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED"   "11Q GAIN MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED"   "11Q GAIN MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED"   "11Q GAIN MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED"   "11Q GAIN MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED"   "11Q GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"11Q GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED"   "11Q GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED"   "11Q GAIN MUTATED" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED"   "11Q GAIN MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED"   "11Q GAIN MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED"   "11Q GAIN MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "11Q GAIN MUTATED"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED"   "11Q GAIN MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED"   "11Q GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" "11Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"11Q GAIN WILD-TYPE"   "11Q GAIN MUTATED" "11Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"11Q GAIN WILD-TYPE" 
[1] "hr=" "1"  
D22V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  11Q GAIN MUTATED         0   101                0
  11Q GAIN WILD-TYPE       2   447                2
D22V3, multiclass
                  clus
vv                 11Q GAIN MUTATED 11Q GAIN WILD-TYPE
  OMENTUM                         0                  2
  OVARY                         101                447
  PERITONEUM OVARY                0                  2
D22V4, continuous
D22V5, binary
                    cls
clus                   0   1
  11Q GAIN MUTATED     0 103
  11Q GAIN WILD-TYPE   3 456
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  11Q GAIN MUTATED      0  103
  11Q GAIN WILD-TYPE    3  456
     clus
vv    11Q GAIN MUTATED 11Q GAIN WILD-TYPE
  NO                 0                  3
  YES              103                456
                    vv
clus                 R0 R1 R2
  11Q GAIN MUTATED    0  6  0
  11Q GAIN WILD-TYPE 14 20  2
D22V6, multiclass
    clus
vv   11Q GAIN MUTATED 11Q GAIN WILD-TYPE
  R0                0                 14
  R1                6                 20
  R2                0                  2

Clustering(23) Variable = 12P GAIN MUTATION ANALYSIS
D23V1, survival
                    sevent
clus2                  0   1
  12P GAIN MUTATED   108 125
  12P GAIN WILD-TYPE 153 161
  12P GAIN MUTATED 12P GAIN WILD-TYPE 
               233                314 
  12P GAIN MUTATED 12P GAIN WILD-TYPE 
               125                161 
$`12P GAIN MUTATED`
TCGA-04-1332 TCGA-04-1342 TCGA-04-1346 TCGA-04-1347 TCGA-04-1351 TCGA-04-1356 
       41.00        18.51        65.49        63.06        65.46        49.28 
TCGA-04-1362 TCGA-04-1371 TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 TCGA-04-1530 
       44.32        82.36        41.59        19.99        38.37       119.08 
TCGA-04-1536 TCGA-04-1542 TCGA-04-1646 TCGA-04-1652 TCGA-04-1655 TCGA-09-0364 
       29.06        84.20        27.88        31.86        45.34        29.16 
TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 
        9.47        57.73        17.95        35.54         9.96        38.43 
TCGA-09-1668 TCGA-09-1670 TCGA-09-1672 TCGA-09-1674 TCGA-09-2043 TCGA-09-2048 
       55.36        17.98         5.85         8.55         6.15         4.50 
TCGA-09-2049 TCGA-09-2051 TCGA-09-2053 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 
      112.37        63.09        39.75        25.91        81.47        18.48 
TCGA-10-0930 TCGA-10-0931 TCGA-10-0933 TCGA-10-0938 TCGA-13-0717 TCGA-13-0723 
       33.24        32.28        11.70        19.86        24.59        39.58 
TCGA-13-0727 TCGA-13-0730 TCGA-13-0757 TCGA-13-0760 TCGA-13-0762 TCGA-13-0764 
       15.19        17.79        11.18        11.54        32.25        31.04 
TCGA-13-0792 TCGA-13-0794 TCGA-13-0795 TCGA-13-0800 TCGA-13-0802 TCGA-13-0883 
       36.72        30.35        19.56         8.12         8.19        68.91 
TCGA-13-0884 TCGA-13-0888 TCGA-13-0890 TCGA-13-0899 TCGA-13-0901 TCGA-13-0904 
      107.18        70.39        67.99        56.15        19.36        48.33 
TCGA-13-0906 TCGA-13-0912 TCGA-13-0920 TCGA-13-0923 TCGA-13-1407 TCGA-13-1411 
       44.94        34.06        13.81         6.41         6.05         4.21 
TCGA-13-1481 TCGA-13-1484 TCGA-13-1485 TCGA-13-1495 TCGA-13-1496 TCGA-13-1499 
       87.06        98.04        20.68        49.22         4.24        38.37 
TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-2057 TCGA-13-2059 TCGA-13-2060 
       16.57         4.21         4.41        14.24        12.23         8.58 
TCGA-13-2061 TCGA-13-2065 TCGA-20-1682 TCGA-20-1686 TCGA-23-1021 TCGA-23-1024 
       10.78         8.75        27.48         2.93        47.54        15.39 
TCGA-23-1030 TCGA-23-1111 TCGA-23-1114 TCGA-23-1116 TCGA-23-1118 TCGA-23-1124 
       29.10         3.22        68.68         4.57        86.01        58.13 
TCGA-23-1809 TCGA-23-2079 TCGA-23-2643 TCGA-23-2645 TCGA-24-0968 TCGA-24-0982 
        0.53        91.66         4.70         4.50        19.63        22.32 
TCGA-24-1418 TCGA-24-1422 TCGA-24-1424 TCGA-24-1427 TCGA-24-1430 TCGA-24-1434 
        7.99         0.76         6.02         4.80        28.34        18.67 
TCGA-24-1436 TCGA-24-1466 TCGA-24-1469 TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 
        8.55        45.14         9.11        22.19        26.96        57.37 
TCGA-24-1546 TCGA-24-1548 TCGA-24-1553 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 
       64.27        16.21        58.09        39.88        19.53        44.09 
TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 TCGA-24-1604 TCGA-24-1614 
       47.70        25.87        10.26        17.23        88.34        48.33 
TCGA-24-1616 TCGA-24-1842 TCGA-24-1844 TCGA-24-1845 TCGA-24-1847 TCGA-24-1850 
       38.24         8.32         3.72         3.81        11.28         5.49 
TCGA-24-1920 TCGA-24-1928 TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 TCGA-24-2033 
        9.80        11.05        81.11         4.87       151.99        18.48 
TCGA-24-2038 TCGA-24-2260 TCGA-24-2261 TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 
       44.48        36.16         0.79        70.45        44.58         0.82 
TCGA-24-2289 TCGA-24-2293 TCGA-24-2295 TCGA-25-1312 TCGA-25-1313 TCGA-25-1315 
       67.36        16.64        33.11         1.02        26.93        51.06 
TCGA-25-1321 TCGA-25-1323 TCGA-25-1626 TCGA-25-1627 TCGA-25-1630 TCGA-25-1634 
       33.96        12.00        15.78         0.36         7.86        35.54 
TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 
       51.22        14.93        24.99        18.05        85.05        13.02 
TCGA-25-2392 TCGA-25-2393 TCGA-25-2396 TCGA-25-2398 TCGA-25-2400 TCGA-29-1690 
        1.02        38.04         3.02        45.01        42.02        44.71 
TCGA-29-1695 TCGA-29-1698 TCGA-29-1699 TCGA-29-1702 TCGA-29-1710 TCGA-29-1761 
        0.79        68.28         0.53        18.64        29.23        17.00 
TCGA-29-1763 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 TCGA-29-1774 TCGA-29-1775 
       66.77        39.09        31.23        22.98        17.29        12.36 
TCGA-29-1777 TCGA-29-1778 TCGA-29-1783 TCGA-29-1784 TCGA-29-2414 TCGA-29-2425 
       12.30        14.93         7.20         5.36        86.17        65.00 
TCGA-29-2428 TCGA-29-2431 TCGA-30-1856 TCGA-30-1859 TCGA-30-1866 TCGA-30-1867 
       45.11        42.25        15.68        48.07        36.62         1.18 
TCGA-30-1887 TCGA-30-1891 TCGA-31-1950 TCGA-31-1955 TCGA-31-1959 TCGA-36-1569 
       24.26        30.05        18.77        42.51         2.17        29.06 
TCGA-36-1571 TCGA-36-1575 TCGA-36-1576 TCGA-36-1580 TCGA-36-2529 TCGA-36-2543 
       22.85         8.55        30.05        24.23        35.05         2.24 
TCGA-36-2547 TCGA-36-2548 TCGA-36-2551 TCGA-36-2552 TCGA-57-1582 TCGA-57-1583 
       20.52        14.17        16.14        11.47        24.03        11.38 
TCGA-57-1586 TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 TCGA-59-2351 TCGA-59-2352 
       22.32        25.05        25.02       180.16       116.12         9.40 
TCGA-59-2363 TCGA-59-2372 TCGA-61-1722 TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 
        5.39        44.78         8.05        27.88         4.34        31.76 
TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 TCGA-61-1900 TCGA-61-1904 
        2.43        33.67        43.69         1.41         5.79         9.07 
TCGA-61-1906 TCGA-61-1907 TCGA-61-1915 TCGA-61-1917 TCGA-61-2002 TCGA-61-2009 
       34.13        31.30        67.73        43.43        17.98        39.85 
TCGA-61-2012 TCGA-61-2097 TCGA-61-2111 TCGA-61-2612 TCGA-61-2614 
       30.64        60.62       125.72         6.35         8.58 

$`12P GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 TCGA-04-1343 
       40.24         1.81        49.15         2.01        46.62        11.87 
TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 TCGA-04-1361 TCGA-04-1364 TCGA-04-1365 
       48.76        21.57        63.98        32.52        33.67        76.54 
TCGA-04-1367 TCGA-04-1514 TCGA-04-1638 TCGA-04-1644 TCGA-04-1648 TCGA-04-1649 
       71.47        56.55        55.40        48.89        28.64        64.64 
TCGA-04-1651 TCGA-04-1654 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 
       36.23        47.70        89.33        74.89        41.59        57.57 
TCGA-09-1667 TCGA-09-1669 TCGA-09-1673 TCGA-09-1675 TCGA-09-2044 TCGA-09-2045 
       61.87        30.48         3.02        97.55         6.12        35.15 
TCGA-09-2050 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0934 
       71.11        20.91        26.93        12.46        54.31         3.88 
TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-13-0714 TCGA-13-0720 TCGA-13-0724 
       35.41        35.80        15.12         6.21        44.55         2.73 
TCGA-13-0725 TCGA-13-0726 TCGA-13-0751 TCGA-13-0755 TCGA-13-0758 TCGA-13-0761 
       12.39        31.07        55.17         2.47        11.38        34.06 
TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 TCGA-13-0793 TCGA-13-0797 TCGA-13-0799 
       21.40         8.42        38.93        28.70         8.71         7.79 
TCGA-13-0801 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 TCGA-13-0885 
        8.28        43.82        35.28        35.28        13.61        91.40 
TCGA-13-0886 TCGA-13-0887 TCGA-13-0889 TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 
       74.27        66.64        61.81        69.01        43.36        57.47 
TCGA-13-0900 TCGA-13-0903 TCGA-13-0905 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 
       57.07        47.38        47.84        44.84        37.08        27.68 
TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0921 TCGA-13-0924 TCGA-13-1403 
       29.98        21.14        14.89         4.64         6.08        10.88 
TCGA-13-1404 TCGA-13-1405 TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 TCGA-13-1412 
        6.61         7.36         5.92         6.84         4.70         5.33 
TCGA-13-1477 TCGA-13-1482 TCGA-13-1483 TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 
       54.61        61.71        29.39        22.39        70.82        82.88 
TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1497 TCGA-13-1498 TCGA-13-1500 
       52.44        73.55        38.17        54.31        37.61        13.97 
TCGA-13-1501 TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 
       32.84         4.77         4.14         2.56         3.88         3.09 
TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1683 
        6.28        23.05        25.94        26.20        72.20        25.38 
TCGA-20-1684 TCGA-20-1685 TCGA-20-1687 TCGA-23-1022 TCGA-23-1023 TCGA-23-1026 
       19.07        16.67         2.66        42.51        40.54        26.83 
TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 
       31.73        49.41         8.81        18.87         2.24        51.35 
TCGA-23-1110 TCGA-23-1113 TCGA-23-1117 TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 
       54.51        31.20        33.30       129.96         4.27         6.38 
TCGA-23-1122 TCGA-23-1123 TCGA-23-2072 TCGA-23-2077 TCGA-23-2078 TCGA-23-2081 
       39.09        33.47        24.95       115.89        87.48        77.00 
TCGA-23-2084 TCGA-23-2641 TCGA-24-0966 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 
       49.84         2.76         7.63        11.64        21.80        41.56 
TCGA-24-0980 TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 
        7.66        54.08        63.55        47.41         6.31         6.38 
TCGA-24-1417 TCGA-24-1419 TCGA-24-1423 TCGA-24-1425 TCGA-24-1426 TCGA-24-1428 
        7.82         7.86         6.25         5.95         5.36        17.36 
TCGA-24-1431 TCGA-24-1435 TCGA-24-1463 TCGA-24-1464 TCGA-24-1467 TCGA-24-1470 
       19.17        43.53        72.92        12.46       105.99         3.42 
TCGA-24-1471 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1555 
        1.18        56.58        41.06        51.91        41.39        88.50 
TCGA-24-1556 TCGA-24-1562 TCGA-24-1603 TCGA-24-1843 TCGA-24-1846 TCGA-24-1849 
       70.62        45.50        90.15         3.48         4.37         5.75 
TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 
       22.65        30.21        16.41        44.84        58.16        34.82 
TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 TCGA-24-2035 TCGA-24-2036 TCGA-24-2254 
      109.68        14.43        53.95        28.18        64.01        57.07 
TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2290 TCGA-24-2297 TCGA-24-2298 
        0.36        47.54        31.63        36.23        55.86        53.26 
TCGA-25-1314 TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 
       31.99        37.02         1.02        34.98        65.00        36.95 
TCGA-25-1322 TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 TCGA-25-1628 TCGA-25-1631 
        2.99         2.96        18.58        18.02        20.58         0.30 
TCGA-25-1632 TCGA-25-1633 TCGA-25-2391 TCGA-25-2397 TCGA-25-2399 TCGA-25-2401 
       56.94        60.59        49.05        12.00        19.99         2.96 
TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1691 TCGA-29-1693 
       29.00        30.97        26.96        78.87        47.18       101.75 
TCGA-29-1694 TCGA-29-1696 TCGA-29-1697 TCGA-29-1701 TCGA-29-1703 TCGA-29-1705 
       38.53        33.70        31.17        16.90        59.67        18.25 
TCGA-29-1707 TCGA-29-1711 TCGA-29-1762 TCGA-29-1764 TCGA-29-1770 TCGA-29-1771 
       41.95        34.62        85.68        62.93        24.36        22.52 
TCGA-29-1776 TCGA-29-1781 TCGA-29-1785 TCGA-29-2427 TCGA-29-2429 TCGA-29-2432 
       11.84         8.35        34.62        62.47         4.87        11.84 
TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 TCGA-30-1855 
       11.47         9.76        38.07        51.91        36.26         2.47 
TCGA-30-1857 TCGA-30-1860 TCGA-30-1861 TCGA-30-1862 TCGA-30-1880 TCGA-30-1892 
        0.26        44.91        34.78         6.08        57.57        48.79 
TCGA-31-1944 TCGA-31-1946 TCGA-31-1951 TCGA-31-1953 TCGA-31-1956 TCGA-36-1568 
       45.57        30.18        22.45         6.71        44.09        28.73 
TCGA-36-1570 TCGA-36-1574 TCGA-36-1577 TCGA-36-1578 TCGA-36-1581 TCGA-36-2530 
       21.53        22.55        25.74        27.85        24.69        33.01 
TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 
       29.49        29.79        25.91        25.08        23.80        21.60 
TCGA-36-2544 TCGA-36-2545 TCGA-36-2549 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 
       20.98        18.31         6.05        26.04        23.74         9.44 
TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1584 TCGA-57-1585 
        7.56         7.46        22.39         1.48        21.14         1.74 
TCGA-57-1992 TCGA-59-2349 TCGA-59-2350 TCGA-59-2354 TCGA-59-2355 TCGA-61-1721 
       28.96        80.12        22.32        34.39         2.14        11.11 
TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 
       20.94        31.40        18.54        28.47        48.79        44.84 
TCGA-61-1738 TCGA-61-1899 TCGA-61-1901 TCGA-61-1903 TCGA-61-1910 TCGA-61-1911 
       35.80         8.42        11.41        13.02        37.02        42.48 
TCGA-61-1913 TCGA-61-1914 TCGA-61-1918 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 
       48.92        56.58        15.75        38.17         1.97         5.52 
TCGA-61-2000 TCGA-61-2003 TCGA-61-2008 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 
       14.50         3.98        30.61         1.18        45.96        45.40 
TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 
        4.80         4.77        51.72        71.74        61.64        58.39 
TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 
       65.49        55.50         6.48        76.83        20.68        44.52 
TCGA-61-2113 TCGA-61-2613 
       22.22        31.07 

  12P GAIN MUTATED 12P GAIN WILD-TYPE 
              0.36               0.26 
  12P GAIN MUTATED 12P GAIN WILD-TYPE 
            180.16             129.96 
  12P GAIN MUTATED 12P GAIN WILD-TYPE 
             24.59              30.08 
[1] "0.4 - 180.2 (24.6)" "0.3 - 130.0 (30.1)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-61-2614 
  "12P GAIN MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-61-2614 
  "12P GAIN MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "12P GAIN MUTATED"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "12P GAIN MUTATED"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED"   "12P GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "12P GAIN MUTATED" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"12P GAIN WILD-TYPE" "12P GAIN WILD-TYPE"   "12P GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"12P GAIN WILD-TYPE"   "12P GAIN MUTATED" "12P GAIN WILD-TYPE" 
        TCGA-61-2614 
  "12P GAIN MUTATED" 
[1] "hr=" "1.1"
D23V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  12P GAIN MUTATED         1   234                2
  12P GAIN WILD-TYPE       1   314                0
D23V3, multiclass
                  clus
vv                 12P GAIN MUTATED 12P GAIN WILD-TYPE
  OMENTUM                         1                  1
  OVARY                         234                314
  PERITONEUM OVARY                2                  0
D23V4, continuous
D23V5, binary
                    cls
clus                   0   1
  12P GAIN MUTATED     1 243
  12P GAIN WILD-TYPE   2 316
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  12P GAIN MUTATED      1  243
  12P GAIN WILD-TYPE    2  316
     clus
vv    12P GAIN MUTATED 12P GAIN WILD-TYPE
  NO                 1                  2
  YES              243                316
                    vv
clus                 R0 R1 R2
  12P GAIN MUTATED    7 10  0
  12P GAIN WILD-TYPE  7 16  2
D23V6, multiclass
    clus
vv   12P GAIN MUTATED 12P GAIN WILD-TYPE
  R0                7                  7
  R1               10                 16
  R2                0                  2

Clustering(24) Variable = 12Q GAIN MUTATION ANALYSIS
D24V1, survival
                    sevent
clus2                  0   1
  12Q GAIN MUTATED    67  92
  12Q GAIN WILD-TYPE 194 194
  12Q GAIN MUTATED 12Q GAIN WILD-TYPE 
               159                388 
  12Q GAIN MUTATED 12Q GAIN WILD-TYPE 
                92                194 
$`12Q GAIN MUTATED`
TCGA-04-1332 TCGA-04-1337 TCGA-04-1342 TCGA-04-1346 TCGA-04-1347 TCGA-04-1362 
       41.00         2.01        18.51        65.49        63.06        44.32 
TCGA-04-1525 TCGA-04-1530 TCGA-04-1536 TCGA-04-1646 TCGA-04-1652 TCGA-04-1655 
       38.37       119.08        29.06        27.88        31.86        45.34 
TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 TCGA-09-1668 TCGA-09-1670 
        9.47        57.73        17.95        35.54        55.36        17.98 
TCGA-09-1672 TCGA-09-2048 TCGA-09-2049 TCGA-09-2053 TCGA-10-0926 TCGA-10-0927 
        5.85         4.50       112.37        39.75        25.91        81.47 
TCGA-10-0930 TCGA-10-0936 TCGA-13-0717 TCGA-13-0723 TCGA-13-0727 TCGA-13-0730 
       33.24        35.80        24.59        39.58        15.19        17.79 
TCGA-13-0795 TCGA-13-0800 TCGA-13-0804 TCGA-13-0884 TCGA-13-0888 TCGA-13-0890 
       19.56         8.12        35.28       107.18        70.39        67.99 
TCGA-13-0912 TCGA-13-0920 TCGA-13-1407 TCGA-13-1481 TCGA-13-1484 TCGA-13-1485 
       34.06        13.81         6.05        87.06        98.04        20.68 
TCGA-13-1488 TCGA-13-1496 TCGA-13-1505 TCGA-13-1506 TCGA-13-2057 TCGA-13-2060 
       70.82         4.24         4.21         4.41        14.24         8.58 
TCGA-13-2061 TCGA-13-2065 TCGA-20-1682 TCGA-20-1685 TCGA-20-1686 TCGA-23-1021 
       10.78         8.75        27.48        16.67         2.93        47.54 
TCGA-23-1111 TCGA-23-1116 TCGA-23-1809 TCGA-23-2643 TCGA-24-0968 TCGA-24-1418 
        3.22         4.57         0.53         4.70        19.63         7.99 
TCGA-24-1419 TCGA-24-1424 TCGA-24-1434 TCGA-24-1436 TCGA-24-1464 TCGA-24-1466 
        7.86         6.02        18.67         8.55        12.46        45.14 
TCGA-24-1469 TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1548 TCGA-24-1557 
        9.11        22.19        26.96        57.37        16.21        39.88 
TCGA-24-1558 TCGA-24-1560 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1616 
       19.53        44.09        47.70        25.87        10.26        38.24 
TCGA-24-1844 TCGA-24-1845 TCGA-24-1847 TCGA-24-1850 TCGA-24-1928 TCGA-24-1930 
        3.72         3.81        11.28         5.49        11.05        81.11 
TCGA-24-2019 TCGA-24-2020 TCGA-24-2033 TCGA-24-2038 TCGA-24-2260 TCGA-24-2261 
        4.87       151.99        18.48        44.48        36.16         0.79 
TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 TCGA-24-2295 TCGA-25-1312 TCGA-25-1313 
       70.45        44.58         0.82        33.11         1.02        26.93 
TCGA-25-1315 TCGA-25-1321 TCGA-25-1323 TCGA-25-1627 TCGA-25-1634 TCGA-25-1635 
       51.06        33.96        12.00         0.36        35.54        51.22 
TCGA-25-1870 TCGA-25-1871 TCGA-25-2392 TCGA-25-2398 TCGA-29-1690 TCGA-29-1695 
       14.93        24.99         1.02        45.01        44.71         0.79 
TCGA-29-1710 TCGA-29-1761 TCGA-29-1763 TCGA-29-1766 TCGA-29-1768 TCGA-29-1774 
       29.23        17.00        66.77        39.09        31.23        17.29 
TCGA-29-1778 TCGA-29-1783 TCGA-29-1784 TCGA-29-2414 TCGA-29-2425 TCGA-29-2428 
       14.93         7.20         5.36        86.17        65.00        45.11 
TCGA-29-2431 TCGA-30-1856 TCGA-30-1859 TCGA-30-1866 TCGA-30-1867 TCGA-31-1950 
       42.25        15.68        48.07        36.62         1.18        18.77 
TCGA-31-1955 TCGA-31-1959 TCGA-36-1571 TCGA-36-1575 TCGA-36-2529 TCGA-36-2543 
       42.51         2.17        22.85         8.55        35.05         2.24 
TCGA-36-2547 TCGA-36-2548 TCGA-36-2551 TCGA-36-2552 TCGA-57-1583 TCGA-57-1585 
       20.52        14.17        16.14        11.47        11.38         1.74 
TCGA-57-1586 TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 TCGA-59-2351 TCGA-59-2352 
       22.32        25.05        25.02       180.16       116.12         9.40 
TCGA-59-2372 TCGA-61-1730 TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 TCGA-61-1906 
       44.78         4.34         2.43        33.67        43.69        34.13 
TCGA-61-1907 TCGA-61-2009 TCGA-61-2012 TCGA-61-2088 TCGA-61-2097 TCGA-61-2102 
       31.30        39.85        30.64         4.77        60.62         6.48 
TCGA-61-2111 TCGA-61-2612 TCGA-61-2614 
      125.72         6.35         8.58 

$`12Q GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1335 TCGA-04-1336 TCGA-04-1338 TCGA-04-1343 TCGA-04-1348 
       40.24         1.81        49.15        46.62        11.87        48.76 
TCGA-04-1349 TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 TCGA-04-1364 
       21.57        63.98        65.46        49.28        32.52        33.67 
TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 
       76.54        71.47        82.36        56.55        41.59        19.99 
TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 
       84.20        55.40        48.89        28.64        64.64        36.23 
TCGA-04-1654 TCGA-09-0364 TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 
       47.70        29.16         9.96        38.43        89.33        74.89 
TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 TCGA-09-1669 TCGA-09-1673 TCGA-09-1674 
       41.59        57.57        61.87        30.48         3.02         8.55 
TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2050 TCGA-09-2051 
       97.55         6.15         6.12        35.15        71.11        63.09 
TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0928 TCGA-10-0931 
       20.91        26.93        12.46        54.31        18.48        32.28 
TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 
       11.70         3.88        35.41        15.12        19.86         6.21 
TCGA-13-0720 TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 TCGA-13-0751 TCGA-13-0755 
       44.55         2.73        12.39        31.07        55.17         2.47 
TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 TCGA-13-0762 TCGA-13-0764 
       11.18        11.38        11.54        34.06        32.25        31.04 
TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 
       21.40         8.42        38.93        36.72        28.70        30.35 
TCGA-13-0797 TCGA-13-0799 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0805 
        8.71         7.79         8.28         8.19        43.82        35.28 
TCGA-13-0807 TCGA-13-0883 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0889 
       13.61        68.91        91.40        74.27        66.64        61.81 
TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 
       69.01        43.36        57.47        56.15        57.07        19.36 
TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 
       47.38        48.33        47.84        44.94        44.84        37.08 
TCGA-13-0911 TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0921 TCGA-13-0923 
       27.68        29.98        21.14        14.89         4.64         6.41 
TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1408 TCGA-13-1409 
        6.08        10.88         6.61         7.36         5.92         6.84 
TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 TCGA-13-1482 TCGA-13-1483 
        4.70         4.21         5.33        54.61        61.71        29.39 
TCGA-13-1487 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 
       22.39        82.88        52.44        73.55        38.17        49.22 
TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 
       54.31        37.61        38.37        13.97        32.84        16.57 
TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2059 
        4.77         4.14         2.56         3.88         3.09        12.23 
TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1683 
        6.28        23.05        25.94        26.20        72.20        25.38 
TCGA-20-1684 TCGA-20-1687 TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 
       19.07         2.66        42.51        40.54        15.39        26.83 
TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 
       31.73        49.41         8.81        29.10        18.87         2.24 
TCGA-23-1109 TCGA-23-1110 TCGA-23-1113 TCGA-23-1114 TCGA-23-1117 TCGA-23-1118 
       51.35        54.51        31.20        68.68        33.30        86.01 
TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 
      129.96         4.27         6.38        39.09        33.47        58.13 
TCGA-23-2072 TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 
       24.95       115.89        87.48        91.66        77.00        49.84 
TCGA-23-2641 TCGA-23-2645 TCGA-24-0966 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 
        2.76         4.50         7.63        11.64        21.80        41.56 
TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 
        7.66        22.32        54.08        63.55        47.41         6.31 
TCGA-24-1416 TCGA-24-1417 TCGA-24-1422 TCGA-24-1423 TCGA-24-1425 TCGA-24-1426 
        6.38         7.82         0.76         6.25         5.95         5.36 
TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 TCGA-24-1435 TCGA-24-1463 
        4.80        17.36        28.34        19.17        43.53        72.92 
TCGA-24-1467 TCGA-24-1470 TCGA-24-1471 TCGA-24-1546 TCGA-24-1549 TCGA-24-1550 
      105.99         3.42         1.18        64.27        56.58        41.06 
TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1562 
       51.91        41.39        58.09        88.50        70.62        45.50 
TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 TCGA-24-1842 TCGA-24-1843 
       17.23        90.15        88.34        48.33         8.32         3.48 
TCGA-24-1846 TCGA-24-1849 TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 
        4.37         5.75         9.80        22.65        30.21        16.41 
TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 
       44.84        58.16        34.82       109.68        14.43        53.95 
TCGA-24-2035 TCGA-24-2036 TCGA-24-2254 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 
       28.18        64.01        57.07         0.36        47.54        31.63 
TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2297 TCGA-24-2298 TCGA-25-1314 
       67.36        36.23        16.64        55.86        53.26        31.99 
TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1322 
       37.02         1.02        34.98        65.00        36.95         2.99 
TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1628 TCGA-25-1630 
        2.96        18.58        18.02        15.78        20.58         7.86 
TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 
        0.30        56.94        60.59        18.05        85.05        13.02 
TCGA-25-2391 TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 TCGA-25-2399 TCGA-25-2400 
       49.05        38.04         3.02        12.00        19.99        42.02 
TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1691 
        2.96        29.00        30.97        26.96        78.87        47.18 
TCGA-29-1693 TCGA-29-1694 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 
      101.75        38.53        33.70        31.17        68.28         0.53 
TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1711 
       16.90        18.64        59.67        18.25        41.95        34.62 
TCGA-29-1762 TCGA-29-1764 TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 TCGA-29-1775 
       85.68        62.93        22.98        24.36        22.52        12.36 
TCGA-29-1776 TCGA-29-1777 TCGA-29-1781 TCGA-29-1785 TCGA-29-2427 TCGA-29-2429 
       11.84        12.30         8.35        34.62        62.47         4.87 
TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 
       11.84        11.47         9.76        38.07        51.91        36.26 
TCGA-30-1855 TCGA-30-1857 TCGA-30-1860 TCGA-30-1861 TCGA-30-1862 TCGA-30-1880 
        2.47         0.26        44.91        34.78         6.08        57.57 
TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1951 
       24.26        30.05        48.79        45.57        30.18        22.45 
TCGA-31-1953 TCGA-31-1956 TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 TCGA-36-1574 
        6.71        44.09        28.73        29.06        21.53        22.55 
TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 TCGA-36-1581 TCGA-36-2530 
       30.05        25.74        27.85        24.23        24.69        33.01 
TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 
       29.49        29.79        25.91        25.08        23.80        21.60 
TCGA-36-2544 TCGA-36-2545 TCGA-36-2549 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 
       20.98        18.31         6.05        26.04        23.74         9.44 
TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1584 
        7.56         7.46        22.39         1.48        24.03        21.14 
TCGA-57-1992 TCGA-59-2349 TCGA-59-2350 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 
       28.96        80.12        22.32        34.39         2.14         5.39 
TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 
       11.11         8.05        20.94        31.40        18.54        27.88 
TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1895 
       31.76        28.47        48.79        44.84        35.80         1.41 
TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1910 
        8.42         5.79        11.41        13.02         9.07        37.02 
TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 
       42.48        48.92        56.58        67.73        43.43        15.75 
TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 
       38.17         1.97         5.52        14.50        17.98         3.98 
TCGA-61-2008 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2092 
       30.61         1.18        45.96        45.40         4.80        51.72 
TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2098 TCGA-61-2101 TCGA-61-2104 
       71.74        61.64        58.39        65.49        55.50        76.83 
TCGA-61-2109 TCGA-61-2110 TCGA-61-2113 TCGA-61-2613 
       20.68        44.52        22.22        31.07 

  12Q GAIN MUTATED 12Q GAIN WILD-TYPE 
              0.36               0.26 
  12Q GAIN MUTATED 12Q GAIN WILD-TYPE 
            180.16             129.96 
  12Q GAIN MUTATED 12Q GAIN WILD-TYPE 
            22.850             29.275 
[1] "0.4 - 180.2 (22.9)" "0.3 - 130.0 (29.3)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-61-2614 
  "12Q GAIN MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-61-2614 
  "12Q GAIN MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "12Q GAIN MUTATED"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED"   "12Q GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"12Q GAIN WILD-TYPE" "12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"12Q GAIN WILD-TYPE"   "12Q GAIN MUTATED" "12Q GAIN WILD-TYPE" 
        TCGA-61-2614 
  "12Q GAIN MUTATED" 
[1] "hr=" "1.3"
D24V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  12Q GAIN MUTATED         0   160                2
  12Q GAIN WILD-TYPE       2   388                0
D24V3, multiclass
                  clus
vv                 12Q GAIN MUTATED 12Q GAIN WILD-TYPE
  OMENTUM                         0                  2
  OVARY                         160                388
  PERITONEUM OVARY                2                  0
D24V4, continuous
D24V5, binary
                    cls
clus                   0   1
  12Q GAIN MUTATED     1 167
  12Q GAIN WILD-TYPE   2 392
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  12Q GAIN MUTATED      1  167
  12Q GAIN WILD-TYPE    2  392
     clus
vv    12Q GAIN MUTATED 12Q GAIN WILD-TYPE
  NO                 1                  2
  YES              167                392
                    vv
clus                 R0 R1 R2
  12Q GAIN MUTATED    5 10  0
  12Q GAIN WILD-TYPE  9 16  2
D24V6, multiclass
    clus
vv   12Q GAIN MUTATED 12Q GAIN WILD-TYPE
  R0                5                  9
  R1               10                 16
  R2                0                  2

Clustering(25) Variable = 13Q GAIN MUTATION ANALYSIS
D25V1, survival
                    sevent
clus2                  0   1
  13Q GAIN MUTATED    24  31
  13Q GAIN WILD-TYPE 237 255
  13Q GAIN MUTATED 13Q GAIN WILD-TYPE 
                55                492 
  13Q GAIN MUTATED 13Q GAIN WILD-TYPE 
                31                255 
$`13Q GAIN MUTATED`
TCGA-04-1337 TCGA-04-1351 TCGA-04-1371 TCGA-09-0364 TCGA-09-0365 TCGA-09-0369 
        2.01        65.46        82.36        29.16         9.47        35.54 
TCGA-09-2049 TCGA-10-0933 TCGA-10-0935 TCGA-13-0727 TCGA-13-0757 TCGA-13-0899 
      112.37        11.70        35.41        15.19        11.18        56.15 
TCGA-13-0921 TCGA-13-1407 TCGA-13-1408 TCGA-13-1481 TCGA-13-1484 TCGA-13-1506 
        4.64         6.05         5.92        87.06        98.04         4.41 
TCGA-23-1030 TCGA-23-1109 TCGA-23-2072 TCGA-24-0970 TCGA-24-1418 TCGA-24-1422 
       29.10        51.35        24.95        11.64         7.99         0.76 
TCGA-24-1436 TCGA-24-1467 TCGA-24-1930 TCGA-25-1312 TCGA-25-1317 TCGA-25-1320 
        8.55       105.99        81.11         1.02         1.02        36.95 
TCGA-25-1323 TCGA-25-1626 TCGA-25-1870 TCGA-25-2398 TCGA-29-1695 TCGA-29-1710 
       12.00        15.78        14.93        45.01         0.79        29.23 
TCGA-29-1761 TCGA-29-1770 TCGA-29-1783 TCGA-29-2425 TCGA-29-2428 TCGA-30-1714 
       17.00        24.36         7.20        65.00        45.11        38.07 
TCGA-30-1718 TCGA-30-1880 TCGA-36-1576 TCGA-36-2552 TCGA-42-2591 TCGA-57-1993 
       51.91        57.57        30.05        11.47        22.39        25.05 
TCGA-59-2355 TCGA-61-1911 TCGA-61-2003 TCGA-61-2008 TCGA-61-2009 TCGA-61-2098 
        2.14        42.48         3.98        30.61        39.85        65.49 
TCGA-61-2102 
        6.48 

$`13Q GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1338 TCGA-04-1342 
       40.24        41.00         1.81        49.15        46.62        18.51 
TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 
       11.87        65.49        63.06        48.76        21.57        63.98 
TCGA-04-1356 TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 
       49.28        32.52        44.32        33.67        76.54        71.47 
TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 TCGA-04-1530 TCGA-04-1536 
       56.55        41.59        19.99        38.37       119.08        29.06 
TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 
       84.20        55.40        48.89        27.88        28.64        64.64 
TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 TCGA-04-1655 TCGA-09-0366 TCGA-09-0367 
       36.23        31.86        47.70        45.34        57.73        17.95 
TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 
        9.96        38.43        89.33        74.89        41.59        57.57 
TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 
       61.87        55.36        30.48        17.98         5.85         3.02 
TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 
        8.55        97.55         6.15         6.12        35.15         4.50 
TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 
       71.11        63.09        39.75        20.91        26.93        12.46 
TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 
       54.31        25.91        81.47        18.48        33.24        32.28 
TCGA-10-0934 TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 
        3.88        35.80        15.12        19.86         6.21        24.59 
TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 TCGA-13-0730 
       44.55        39.58         2.73        12.39        31.07        17.79 
TCGA-13-0751 TCGA-13-0755 TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 TCGA-13-0762 
       55.17         2.47        11.38        11.54        34.06        32.25 
TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 
       31.04        21.40         8.42        38.93        36.72        28.70 
TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 
       30.35        19.56         8.71         7.79         8.12         8.28 
TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 
        8.19        43.82        35.28        35.28        13.61        68.91 
TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 
      107.18        91.40        74.27        66.64        70.39        61.81 
TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 TCGA-13-0900 TCGA-13-0901 
       67.99        69.01        43.36        57.47        57.07        19.36 
TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 
       47.38        48.33        47.84        44.94        44.84        37.08 
TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 
       27.68        34.06        29.98        21.14        14.89        13.81 
TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1409 
        6.41         6.08        10.88         6.61         7.36         6.84 
TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 TCGA-13-1482 TCGA-13-1483 
        4.70         4.21         5.33        54.61        61.71        29.39 
TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 
       20.68        22.39        70.82        82.88        52.44        73.55 
TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 
       38.17        49.22         4.24        54.31        37.61        38.37 
TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1507 TCGA-13-1509 
       13.97        32.84        16.57         4.21         4.77         4.14 
TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 TCGA-13-2059 TCGA-13-2060 
        2.56         3.88         3.09        14.24        12.23         8.58 
TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 
       10.78         8.75         6.28        23.05        25.94        26.20 
TCGA-20-0996 TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 
       72.20        27.48        25.38        19.07        16.67         2.93 
TCGA-20-1687 TCGA-23-1021 TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 
        2.66        47.54        42.51        40.54        15.39        26.83 
TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1031 TCGA-23-1032 TCGA-23-1110 
       31.73        49.41         8.81        18.87         2.24        54.51 
TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 
        3.22        31.20        68.68         4.57        33.30        86.01 
TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 
      129.96         4.27         6.38        39.09        33.47        58.13 
TCGA-23-1809 TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 
        0.53       115.89        87.48        91.66        77.00        49.84 
TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 TCGA-24-0975 
        2.76         4.70         4.50         7.63        19.63        21.80 
TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 
       41.56         7.66        22.32        54.08        63.55        47.41 
TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 TCGA-24-1419 TCGA-24-1423 TCGA-24-1424 
        6.31         6.38         7.82         7.86         6.25         6.02 
TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 
        5.95         5.36         4.80        17.36        28.34        19.17 
TCGA-24-1434 TCGA-24-1435 TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 TCGA-24-1469 
       18.67        43.53        72.92        12.46        45.14         9.11 
TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 
        3.42         1.18        22.19        26.96        57.37        64.27 
TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 
       16.21        56.58        41.06        51.91        41.39        58.09 
TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 
       88.50        70.62        39.88        19.53        44.09        45.50 
TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 
       47.70        25.87        10.26        17.23        90.15        88.34 
TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 TCGA-24-1845 
       48.33        38.24         8.32         3.48         3.72         3.81 
TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 
        4.37        11.28         5.75         5.49         9.80        22.65 
TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 
       30.21        16.41        11.05         4.87       151.99        44.84 
TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 
       58.16        34.82       109.68        14.43        53.95        18.48 
TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 
       28.18        64.01        44.48        57.07        36.16         0.79 
TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 
        0.36        47.54        31.63        70.45        44.58         0.82 
TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 TCGA-24-2298 
       67.36        36.23        16.64        33.11        55.86        53.26 
TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1318 TCGA-25-1319 
       26.93        31.99        51.06        37.02        34.98        65.00 
TCGA-25-1321 TCGA-25-1322 TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 TCGA-25-1627 
       33.96         2.99         2.96        18.58        18.02         0.36 
TCGA-25-1628 TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 
       20.58         7.86         0.30        56.94        60.59        35.54 
TCGA-25-1635 TCGA-25-1871 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 
       51.22        24.99        18.05        85.05        13.02        49.05 
TCGA-25-2392 TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 TCGA-25-2399 TCGA-25-2400 
        1.02        38.04         3.02        12.00        19.99        42.02 
TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 
        2.96        29.00        30.97        26.96        78.87        44.71 
TCGA-29-1691 TCGA-29-1693 TCGA-29-1694 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 
       47.18       101.75        38.53        33.70        31.17        68.28 
TCGA-29-1699 TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 
        0.53        16.90        18.64        59.67        18.25        41.95 
TCGA-29-1711 TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 
       34.62        85.68        66.77        62.93        39.09        31.23 
TCGA-29-1769 TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 TCGA-29-1776 TCGA-29-1777 
       22.98        22.52        17.29        12.36        11.84        12.30 
TCGA-29-1778 TCGA-29-1781 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 TCGA-29-2427 
       14.93         8.35         5.36        34.62        86.17        62.47 
TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 TCGA-30-1853 
        4.87        42.25        11.84        11.47         9.76        36.26 
TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 TCGA-30-1861 
        2.47        15.68         0.26        48.07        44.91        34.78 
TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 
        6.08        36.62         1.18        24.26        30.05        48.79 
TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 
       45.57        30.18        18.77        22.45         6.71        42.51 
TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 
       44.09         2.17        28.73        29.06        21.53        22.85 
TCGA-36-1574 TCGA-36-1575 TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 TCGA-36-1581 
       22.55         8.55        25.74        27.85        24.23        24.69 
TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 
       35.05        33.01        29.49        29.79        25.91        25.08 
TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 
       23.80        21.60         2.24        20.98        18.31        20.52 
TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 
       14.17         6.05        16.14        26.04        23.74         9.44 
TCGA-42-2589 TCGA-42-2590 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 
        7.56         7.46         1.48        24.03        11.38        21.14 
TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 
        1.74        22.32        28.96        25.02       180.16        80.12 
TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 TCGA-59-2354 TCGA-59-2363 TCGA-59-2372 
       22.32       116.12         9.40        34.39         5.39        44.78 
TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 
       11.11         8.05        20.94        31.40        18.54        27.88 
TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 
        4.34        31.76        28.47        48.79        44.84        35.80 
TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 
        2.43        33.67        43.69         1.41         8.42         5.79 
TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 
       11.41        13.02         9.07        34.13        31.30        37.02 
TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 
       48.92        56.58        67.73        43.43        15.75        38.17 
TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2012 TCGA-61-2016 
        1.97         5.52        14.50        17.98        30.64         1.18 
TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 
       45.96        45.40         4.80         4.77        51.72        71.74 
TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 TCGA-61-2101 TCGA-61-2104 TCGA-61-2109 
       61.64        58.39        60.62        55.50        76.83        20.68 
TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
       44.52       125.72        22.22         6.35        31.07         8.58 

  13Q GAIN MUTATED 13Q GAIN WILD-TYPE 
              0.76               0.26 
  13Q GAIN MUTATED 13Q GAIN WILD-TYPE 
            112.37             180.16 
  13Q GAIN MUTATED 13Q GAIN WILD-TYPE 
            24.950             28.405 
[1] "0.8 - 112.4 (24.9)" "0.3 - 180.2 (28.4)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED"   "13Q GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "13Q GAIN MUTATED"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED"   "13Q GAIN MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "13Q GAIN MUTATED"   "13Q GAIN MUTATED"   "13Q GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"13Q GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED"   "13Q GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "13Q GAIN MUTATED"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED"   "13Q GAIN MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "13Q GAIN MUTATED"   "13Q GAIN MUTATED"   "13Q GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"13Q GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED"   "13Q GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "13Q GAIN MUTATED"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED"   "13Q GAIN MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "13Q GAIN MUTATED"   "13Q GAIN MUTATED"   "13Q GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"13Q GAIN WILD-TYPE"   "13Q GAIN MUTATED" "13Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" "13Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"13Q GAIN WILD-TYPE" 
[1] "hr=" "1.1"
D25V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  13Q GAIN MUTATED         0    55                0
  13Q GAIN WILD-TYPE       2   493                2
D25V3, multiclass
                  clus
vv                 13Q GAIN MUTATED 13Q GAIN WILD-TYPE
  OMENTUM                         0                  2
  OVARY                          55                493
  PERITONEUM OVARY                0                  2
D25V4, continuous
D25V5, binary
                    cls
clus                   0   1
  13Q GAIN MUTATED     1  56
  13Q GAIN WILD-TYPE   2 503
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  13Q GAIN MUTATED      1   56
  13Q GAIN WILD-TYPE    2  503
     clus
vv    13Q GAIN MUTATED 13Q GAIN WILD-TYPE
  NO                 1                  2
  YES               56                503
                    vv
clus                 R0 R1 R2
  13Q GAIN MUTATED    2  2  0
  13Q GAIN WILD-TYPE 12 24  2
D25V6, multiclass
    clus
vv   13Q GAIN MUTATED 13Q GAIN WILD-TYPE
  R0                2                 12
  R1                2                 24
  R2                0                  2

Clustering(26) Variable = 14Q GAIN MUTATION ANALYSIS
D26V1, survival
                    sevent
clus2                  0   1
  14Q GAIN MUTATED    27  28
  14Q GAIN WILD-TYPE 234 258
  14Q GAIN MUTATED 14Q GAIN WILD-TYPE 
                55                492 
  14Q GAIN MUTATED 14Q GAIN WILD-TYPE 
                28                258 
$`14Q GAIN MUTATED`
TCGA-04-1514 TCGA-04-1517 TCGA-04-1646 TCGA-04-1652 TCGA-09-0364 TCGA-09-1667 
       56.55        19.99        27.88        31.86        29.16        61.87 
TCGA-09-1668 TCGA-09-1669 TCGA-13-0762 TCGA-13-0768 TCGA-13-0899 TCGA-13-0901 
       55.36        30.48        32.25         8.42        56.15        19.36 
TCGA-13-1408 TCGA-13-1484 TCGA-13-1501 TCGA-13-1505 TCGA-13-2057 TCGA-13-2059 
        5.92        98.04        32.84         4.21        14.24        12.23 
TCGA-20-0991 TCGA-23-1116 TCGA-23-1809 TCGA-24-1103 TCGA-24-1417 TCGA-24-1422 
       26.20         4.57         0.53        54.08         7.82         0.76 
TCGA-24-1545 TCGA-24-1555 TCGA-24-1842 TCGA-24-1844 TCGA-24-1923 TCGA-24-2030 
       57.37        88.50         8.32         3.72        22.65        53.95 
TCGA-24-2261 TCGA-25-1314 TCGA-25-1317 TCGA-25-1321 TCGA-25-1628 TCGA-25-1878 
        0.79        31.99         1.02        33.96        20.58        85.05 
TCGA-25-2401 TCGA-25-2408 TCGA-29-1701 TCGA-29-1702 TCGA-29-1784 TCGA-29-2428 
        2.96        30.97        16.90        18.64         5.36        45.11 
TCGA-30-1714 TCGA-30-1866 TCGA-31-1959 TCGA-36-1570 TCGA-36-2544 TCGA-36-2545 
       38.07        36.62         2.17        21.53        20.98        18.31 
TCGA-36-2548 TCGA-57-1583 TCGA-59-2352 TCGA-59-2355 TCGA-61-1730 TCGA-61-2097 
       14.17        11.38         9.40         2.14         4.34        60.62 
TCGA-61-2612 
        6.35 

$`14Q GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 
       18.51        11.87        65.49        63.06        48.76        21.57 
TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 
       63.98        65.46        49.28        32.52        44.32        33.67 
TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1516 TCGA-04-1525 TCGA-04-1530 
       76.54        71.47        82.36        41.59        38.37       119.08 
TCGA-04-1536 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 TCGA-04-1648 TCGA-04-1649 
       29.06        84.20        55.40        48.89        28.64        64.64 
TCGA-04-1651 TCGA-04-1654 TCGA-04-1655 TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 
       36.23        47.70        45.34         9.47        57.73        17.95 
TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 
       35.54         9.96        38.43        89.33        74.89        41.59 
TCGA-09-1666 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 
       57.57        17.98         5.85         3.02         8.55        97.55 
TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 
        6.15         6.12        35.15         4.50       112.37        71.11 
TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 
       63.09        39.75        20.91        26.93        12.46        54.31 
TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 TCGA-10-0933 
       25.91        81.47        18.48        33.24        32.28        11.70 
TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 
        3.88        35.41        35.80        15.12        19.86         6.21 
TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 
       24.59        44.55        39.58         2.73        12.39        31.07 
TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 
       15.19        17.79        55.17         2.47        11.18        11.38 
TCGA-13-0760 TCGA-13-0761 TCGA-13-0764 TCGA-13-0766 TCGA-13-0791 TCGA-13-0792 
       11.54        34.06        31.04        21.40        38.93        36.72 
TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 
       28.70        30.35        19.56         8.71         7.79         8.12 
TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 
        8.28         8.19        43.82        35.28        35.28        13.61 
TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 
       68.91       107.18        91.40        74.27        66.64        70.39 
TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 TCGA-13-0900 
       61.81        67.99        69.01        43.36        57.47        57.07 
TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 
       47.38        48.33        47.84        44.94        44.84        37.08 
TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 
       27.68        34.06        29.98        21.14        14.89        13.81 
TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 
        4.64         6.41         6.08        10.88         6.61         7.36 
TCGA-13-1407 TCGA-13-1409 TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 
        6.05         6.84         4.70         4.21         5.33        54.61 
TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 
       87.06        61.71        29.39        20.68        22.39        70.82 
TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 
       82.88        52.44        73.55        38.17        49.22         4.24 
TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1504 TCGA-13-1506 
       54.31        37.61        38.37        13.97        16.57         4.41 
TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2060 
        4.77         4.14         2.56         3.88         3.09         8.58 
TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 TCGA-20-0996 
       10.78         8.75         6.28        23.05        25.94        72.20 
TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 
       27.48        25.38        19.07        16.67         2.93         2.66 
TCGA-23-1021 TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 
       47.54        42.51        40.54        15.39        26.83        31.73 
TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 
       49.41         8.81        29.10        18.87         2.24        51.35 
TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 TCGA-23-1117 TCGA-23-1118 
       54.51         3.22        31.20        68.68        33.30        86.01 
TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 
      129.96         4.27         6.38        39.09        33.47        58.13 
TCGA-23-2072 TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 
       24.95       115.89        87.48        91.66        77.00        49.84 
TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 
        2.76         4.70         4.50         7.63        19.63        11.64 
TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 TCGA-24-1104 TCGA-24-1105 
       21.80        41.56         7.66        22.32        63.55        47.41 
TCGA-24-1413 TCGA-24-1416 TCGA-24-1418 TCGA-24-1419 TCGA-24-1423 TCGA-24-1424 
        6.31         6.38         7.99         7.86         6.25         6.02 
TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 
        5.95         5.36         4.80        17.36        28.34        19.17 
TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 
       18.67        43.53         8.55        72.92        12.46        45.14 
TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 
      105.99         9.11         3.42         1.18        22.19        26.96 
TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 
       64.27        16.21        56.58        41.06        51.91        41.39 
TCGA-24-1553 TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 
       58.09        70.62        39.88        19.53        44.09        45.50 
TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 
       47.70        25.87        10.26        17.23        90.15        88.34 
TCGA-24-1614 TCGA-24-1616 TCGA-24-1843 TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 
       48.33        38.24         3.48         3.81         4.37        11.28 
TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 
        5.75         5.49         9.80        30.21        16.41        11.05 
TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 
       81.11         4.87       151.99        44.84        58.16        34.82 
TCGA-24-2027 TCGA-24-2029 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 
      109.68        14.43        18.48        28.18        64.01        44.48 
TCGA-24-2254 TCGA-24-2260 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 
       57.07        36.16         0.36        47.54        31.63        70.45 
TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 
       44.58         0.82        67.36        36.23        16.64        33.11 
TCGA-24-2297 TCGA-24-2298 TCGA-25-1312 TCGA-25-1313 TCGA-25-1315 TCGA-25-1316 
       55.86        53.26         1.02        26.93        51.06        37.02 
TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 
       34.98        65.00        36.95         2.99        12.00         2.96 
TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1630 TCGA-25-1631 
       18.58        18.02        15.78         0.36         7.86         0.30 
TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 
       56.94        60.59        35.54        51.22        14.93        24.99 
TCGA-25-1877 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 TCGA-25-2396 
       18.05        13.02        49.05         1.02        38.04         3.02 
TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 TCGA-25-2404 TCGA-25-2409 
       12.00        45.01        19.99        42.02        29.00        26.96 
TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 
       78.87        44.71        47.18       101.75        38.53         0.79 
TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1703 TCGA-29-1705 
       33.70        31.17        68.28         0.53        59.67        18.25 
TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 TCGA-29-1763 
       41.95        29.23        34.62        17.00        85.68        66.77 
TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 
       62.93        39.09        31.23        22.98        24.36        22.52 
TCGA-29-1774 TCGA-29-1775 TCGA-29-1776 TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 
       17.29        12.36        11.84        12.30        14.93         8.35 
TCGA-29-1783 TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2429 
        7.20        34.62        86.17        65.00        62.47         4.87 
TCGA-29-2431 TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 TCGA-30-1718 TCGA-30-1853 
       42.25        11.84        11.47         9.76        51.91        36.26 
TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 TCGA-30-1861 
        2.47        15.68         0.26        48.07        44.91        34.78 
TCGA-30-1862 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 
        6.08         1.18        57.57        24.26        30.05        48.79 
TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 
       45.57        30.18        18.77        22.45         6.71        42.51 
TCGA-31-1956 TCGA-36-1568 TCGA-36-1569 TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 
       44.09        28.73        29.06        22.85        22.55         8.55 
TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 TCGA-36-1581 TCGA-36-2529 
       30.05        25.74        27.85        24.23        24.69        35.05 
TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 
       33.01        29.49        29.79        25.91        25.08        23.80 
TCGA-36-2542 TCGA-36-2543 TCGA-36-2547 TCGA-36-2549 TCGA-36-2551 TCGA-36-2552 
       21.60         2.24        20.52         6.05        16.14        11.47 
TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 
       26.04        23.74         9.44         7.56         7.46        22.39 
TCGA-42-2593 TCGA-57-1582 TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 
        1.48        24.03        21.14         1.74        22.32        28.96 
TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 
       25.05        25.02       180.16        80.12        22.32       116.12 
TCGA-59-2354 TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 
       34.39         5.39        44.78        11.11         8.05        20.94 
TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 
       31.40        18.54        27.88        31.76        28.47        48.79 
TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 
       44.84        35.80         2.43        33.67        43.69         1.41 
TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 
        8.42         5.79        11.41        13.02         9.07        34.13 
TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 
       31.30        37.02        42.48        48.92        56.58        67.73 
TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 
       43.43        15.75        38.17         1.97         5.52        14.50 
TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 
       17.98         3.98        30.61        39.85        30.64         1.18 
TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 
       45.96        45.40         4.80         4.77        51.72        71.74 
TCGA-61-2095 TCGA-61-2096 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 
       61.64        58.39        65.49        55.50         6.48        76.83 
TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 TCGA-61-2613 TCGA-61-2614 
       20.68        44.52       125.72        22.22        31.07         8.58 

  14Q GAIN MUTATED 14Q GAIN WILD-TYPE 
              0.53               0.26 
  14Q GAIN MUTATED 14Q GAIN WILD-TYPE 
             98.04             180.16 
  14Q GAIN MUTATED 14Q GAIN WILD-TYPE 
            20.580             28.845 
[1] "0.5 - 98.0 (20.6)"  "0.3 - 180.2 (28.8)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "14Q GAIN MUTATED"   "14Q GAIN MUTATED"   "14Q GAIN MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "14Q GAIN MUTATED"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "14Q GAIN MUTATED"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
  "14Q GAIN MUTATED"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"14Q GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "14Q GAIN MUTATED"   "14Q GAIN MUTATED"   "14Q GAIN MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "14Q GAIN MUTATED"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "14Q GAIN MUTATED"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
  "14Q GAIN MUTATED"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"14Q GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "14Q GAIN MUTATED"   "14Q GAIN MUTATED"   "14Q GAIN MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "14Q GAIN MUTATED"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "14Q GAIN MUTATED"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
  "14Q GAIN MUTATED"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" "14Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"14Q GAIN WILD-TYPE"   "14Q GAIN MUTATED" "14Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"14Q GAIN WILD-TYPE" 
[1] "hr=" "1.2"
D26V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  14Q GAIN MUTATED         0    56                0
  14Q GAIN WILD-TYPE       2   492                2
D26V3, multiclass
                  clus
vv                 14Q GAIN MUTATED 14Q GAIN WILD-TYPE
  OMENTUM                         0                  2
  OVARY                          56                492
  PERITONEUM OVARY                0                  2
D26V4, continuous
D26V5, binary
                    cls
clus                   0   1
  14Q GAIN MUTATED     1  55
  14Q GAIN WILD-TYPE   2 504
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  14Q GAIN MUTATED      1   55
  14Q GAIN WILD-TYPE    2  504
     clus
vv    14Q GAIN MUTATED 14Q GAIN WILD-TYPE
  NO                 1                  2
  YES               55                504
                    vv
clus                 R0 R1 R2
  14Q GAIN MUTATED    1  4  0
  14Q GAIN WILD-TYPE 13 22  2
D26V6, multiclass
    clus
vv   14Q GAIN MUTATED 14Q GAIN WILD-TYPE
  R0                1                 13
  R1                4                 22
  R2                0                  2

Clustering(27) Variable = 15Q GAIN MUTATION ANALYSIS
D27V1, survival
                    sevent
clus2                  0   1
  15Q GAIN MUTATED    24  13
  15Q GAIN WILD-TYPE 237 273
  15Q GAIN MUTATED 15Q GAIN WILD-TYPE 
                37                510 
  15Q GAIN MUTATED 15Q GAIN WILD-TYPE 
                13                273 
$`15Q GAIN MUTATED`
TCGA-04-1349 TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 TCGA-04-1362 TCGA-09-1675 
       21.57        65.46        49.28        32.52        44.32        97.55 
TCGA-09-2053 TCGA-10-0938 TCGA-13-0761 TCGA-13-0792 TCGA-13-0890 TCGA-13-0919 
       39.75        19.86        34.06        36.72        67.99        14.89 
TCGA-13-1412 TCGA-13-2059 TCGA-13-2065 TCGA-13-2071 TCGA-23-1021 TCGA-23-2072 
        5.33        12.23         8.75         6.28        47.54        24.95 
TCGA-23-2079 TCGA-24-1413 TCGA-24-1419 TCGA-24-1551 TCGA-24-1558 TCGA-24-2289 
       91.66         6.31         7.86        51.91        19.53        67.36 
TCGA-25-1627 TCGA-31-1959 TCGA-36-1571 TCGA-36-2542 TCGA-36-2552 TCGA-42-2587 
        0.36         2.17        22.85        21.60        11.47        23.74 
TCGA-57-1582 TCGA-57-1994 TCGA-61-1730 TCGA-61-1907 TCGA-61-1915 TCGA-61-2009 
       24.03        25.02         4.34        31.30        67.73        39.85 
TCGA-61-2097 
       60.62 

$`15Q GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1350 
       18.51        11.87        65.49        63.06        48.76        63.98 
TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 
       33.67        76.54        71.47        82.36        56.55        41.59 
TCGA-04-1517 TCGA-04-1525 TCGA-04-1530 TCGA-04-1536 TCGA-04-1542 TCGA-04-1638 
       19.99        38.37       119.08        29.06        84.20        55.40 
TCGA-04-1644 TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 
       48.89        27.88        28.64        64.64        36.23        31.86 
TCGA-04-1654 TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 
       47.70        45.34        29.16         9.47        57.73        17.95 
TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 
       35.54         9.96        38.43        89.33        74.89        41.59 
TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 TCGA-09-1672 
       57.57        61.87        55.36        30.48        17.98         5.85 
TCGA-09-1673 TCGA-09-1674 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 
        3.02         8.55         6.15         6.12        35.15         4.50 
TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 
      112.37        71.11        63.09        20.91        26.93        12.46 
TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 
       54.31        25.91        81.47        18.48        33.24        32.28 
TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-13-0714 
       11.70         3.88        35.41        35.80        15.12         6.21 
TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 
       24.59        44.55        39.58         2.73        12.39        31.07 
TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 
       15.19        17.79        55.17         2.47        11.18        11.38 
TCGA-13-0760 TCGA-13-0762 TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 
       11.54        32.25        31.04        21.40         8.42        38.93 
TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 
       28.70        30.35        19.56         8.71         7.79         8.12 
TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 
        8.28         8.19        43.82        35.28        35.28        13.61 
TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 
       68.91       107.18        91.40        74.27        66.64        70.39 
TCGA-13-0889 TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 
       61.81        69.01        43.36        57.47        56.15        57.07 
TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 
       19.36        47.38        48.33        47.84        44.94        44.84 
TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0920 
       37.08        27.68        34.06        29.98        21.14        13.81 
TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 
        4.64         6.41         6.08        10.88         6.61         7.36 
TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 TCGA-13-1411 TCGA-13-1477 
        6.05         5.92         6.84         4.70         4.21        54.61 
TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 
       87.06        61.71        29.39        98.04        20.68        22.39 
TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 
       70.82        82.88        52.44        73.55        38.17        49.22 
TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 
        4.24        54.31        37.61        38.37        13.97        32.84 
TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 
       16.57         4.21         4.41         4.77         4.14         2.56 
TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 TCGA-13-2060 TCGA-13-2061 TCGA-20-0987 
        3.88         3.09        14.24         8.58        10.78        23.05 
TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 
       25.94        26.20        72.20        27.48        25.38        19.07 
TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 
       16.67         2.93         2.66        42.51        40.54        15.39 
TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 
       26.83        31.73        49.41         8.81        29.10        18.87 
TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 
        2.24        51.35        54.51         3.22        31.20        68.68 
TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 
        4.57        33.30        86.01       129.96         4.27         6.38 
TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 TCGA-23-2077 TCGA-23-2078 
       39.09        33.47        58.13         0.53       115.89        87.48 
TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 
       77.00        49.84         2.76         4.70         4.50         7.63 
TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 
       19.63        11.64        21.80        41.56         7.66        22.32 
TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 
       54.08        63.55        47.41         6.38         7.82         7.99 
TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 
        0.76         6.25         6.02         5.95         5.36         4.80 
TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 
       17.36        28.34        19.17        18.67        43.53         8.55 
TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 
       72.92        12.46        45.14       105.99         9.11         3.42 
TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 
        1.18        22.19        26.96        57.37        64.27        16.21 
TCGA-24-1549 TCGA-24-1550 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 
       56.58        41.06        41.39        58.09        88.50        70.62 
TCGA-24-1557 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 
       39.88        44.09        45.50        47.70        25.87        10.26 
TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 
       17.23        90.15        88.34        48.33        38.24         8.32 
TCGA-24-1843 TCGA-24-1844 TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 
        3.48         3.72         3.81         4.37        11.28         5.75 
TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 
        5.49         9.80        22.65        30.21        16.41        11.05 
TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 
       81.11         4.87       151.99        44.84        58.16        34.82 
TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 
      109.68        14.43        53.95        18.48        28.18        64.01 
TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 
       44.48        57.07        36.16         0.79         0.36        47.54 
TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 TCGA-24-2290 TCGA-24-2293 
       31.63        70.45        44.58         0.82        36.23        16.64 
TCGA-24-2295 TCGA-24-2297 TCGA-24-2298 TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 
       33.11        55.86        53.26         1.02        26.93        31.99 
TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 
       51.06        37.02         1.02        34.98        65.00        36.95 
TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 
       33.96         2.99        12.00         2.96        18.58        18.02 
TCGA-25-1626 TCGA-25-1628 TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 
       15.78        20.58         7.86         0.30        56.94        60.59 
TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 TCGA-25-1878 
       35.54        51.22        14.93        24.99        18.05        85.05 
TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 
       13.02        49.05         1.02        38.04         3.02        12.00 
TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 
       45.01        19.99        42.02         2.96        29.00        30.97 
TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 TCGA-29-1693 TCGA-29-1694 
       26.96        78.87        44.71        47.18       101.75        38.53 
TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 
        0.79        33.70        31.17        68.28         0.53        16.90 
TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 
       18.64        59.67        18.25        41.95        29.23        34.62 
TCGA-29-1761 TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 
       17.00        85.68        66.77        62.93        39.09        31.23 
TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 TCGA-29-1776 
       22.98        24.36        22.52        17.29        12.36        11.84 
TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 
       12.30        14.93         8.35         7.20         5.36        34.62 
TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 
       86.17        65.00        62.47        45.11         4.87        42.25 
TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 
       11.84        11.47         9.76        38.07        51.91        36.26 
TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 TCGA-30-1861 
        2.47        15.68         0.26        48.07        44.91        34.78 
TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 
        6.08        36.62         1.18        57.57        24.26        30.05 
TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 
       48.79        45.57        30.18        18.77        22.45         6.71 
TCGA-31-1955 TCGA-31-1956 TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 TCGA-36-1574 
       42.51        44.09        28.73        29.06        21.53        22.55 
TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 TCGA-36-1581 
        8.55        30.05        25.74        27.85        24.23        24.69 
TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 
       35.05        33.01        29.49        29.79        25.91        25.08 
TCGA-36-2540 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 TCGA-36-2548 
       23.80         2.24        20.98        18.31        20.52        14.17 
TCGA-36-2549 TCGA-36-2551 TCGA-42-2582 TCGA-42-2588 TCGA-42-2589 TCGA-42-2590 
        6.05        16.14        26.04         9.44         7.56         7.46 
TCGA-42-2591 TCGA-42-2593 TCGA-57-1583 TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 
       22.39         1.48        11.38        21.14         1.74        22.32 
TCGA-57-1992 TCGA-57-1993 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 
       28.96        25.05       180.16        80.12        22.32       116.12 
TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 
        9.40        34.39         2.14         5.39        44.78        11.11 
TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 TCGA-61-1733 
        8.05        20.94        31.40        18.54        27.88        31.76 
TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 
       28.47        48.79        44.84        35.80         2.43        33.67 
TCGA-61-1743 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 
       43.69         1.41         8.42         5.79        11.41        13.02 
TCGA-61-1904 TCGA-61-1906 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 
        9.07        34.13        37.02        42.48        48.92        56.58 
TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 
       43.43        15.75        38.17         1.97         5.52        14.50 
TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 
       17.98         3.98        30.61        30.64         1.18        45.96 
TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 
       45.40         4.80         4.77        51.72        71.74        61.64 
TCGA-61-2096 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 
       58.39        65.49        55.50         6.48        76.83        20.68 
TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
       44.52       125.72        22.22         6.35        31.07         8.58 

  15Q GAIN MUTATED 15Q GAIN WILD-TYPE 
              0.36               0.26 
  15Q GAIN MUTATED 15Q GAIN WILD-TYPE 
             97.55             180.16 
  15Q GAIN MUTATED 15Q GAIN WILD-TYPE 
            24.950             28.405 
[1] "0.4 - 97.5 (24.9)"  "0.3 - 180.2 (28.4)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED"   "15Q GAIN MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "15Q GAIN MUTATED"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED"   "15Q GAIN MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"15Q GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED"   "15Q GAIN MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "15Q GAIN MUTATED"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED"   "15Q GAIN MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"15Q GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED"   "15Q GAIN MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "15Q GAIN MUTATED"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED"   "15Q GAIN MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"15Q GAIN WILD-TYPE"   "15Q GAIN MUTATED" "15Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" "15Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"15Q GAIN WILD-TYPE" 
[1] "hr=" "1.6"
D27V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  15Q GAIN MUTATED         0    38                0
  15Q GAIN WILD-TYPE       2   510                2
D27V3, multiclass
                  clus
vv                 15Q GAIN MUTATED 15Q GAIN WILD-TYPE
  OMENTUM                         0                  2
  OVARY                          38                510
  PERITONEUM OVARY                0                  2
D27V4, continuous
D27V5, binary
                    cls
clus                   0   1
  15Q GAIN MUTATED     0  39
  15Q GAIN WILD-TYPE   3 520
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  15Q GAIN MUTATED      0   39
  15Q GAIN WILD-TYPE    3  520
     clus
vv    15Q GAIN MUTATED 15Q GAIN WILD-TYPE
  NO                 0                  3
  YES               39                520
                    vv
clus                 R0 R1 R2
  15Q GAIN MUTATED    1  2  0
  15Q GAIN WILD-TYPE 13 24  2
D27V6, multiclass
    clus
vv   15Q GAIN MUTATED 15Q GAIN WILD-TYPE
  R0                1                 13
  R1                2                 24
  R2                0                  2

Clustering(28) Variable = 16P GAIN MUTATION ANALYSIS
D28V1, survival
                    sevent
clus2                  0   1
  16P GAIN MUTATED    27  29
  16P GAIN WILD-TYPE 234 257
  16P GAIN MUTATED 16P GAIN WILD-TYPE 
                56                491 
  16P GAIN MUTATED 16P GAIN WILD-TYPE 
                29                257 
$`16P GAIN MUTATED`
TCGA-04-1351 TCGA-04-1371 TCGA-04-1525 TCGA-04-1542 TCGA-04-1646 TCGA-04-1648 
       65.46        82.36        38.37        84.20        27.88        28.64 
TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0369 TCGA-09-1672 TCGA-09-2051 
       45.34        29.16         9.47        35.54         5.85        63.09 
TCGA-10-0936 TCGA-13-0724 TCGA-13-0889 TCGA-13-0897 TCGA-13-0901 TCGA-13-0921 
       35.80         2.73        61.81        57.47        19.36         4.64 
TCGA-13-1487 TCGA-13-1510 TCGA-13-2059 TCGA-20-1682 TCGA-23-1021 TCGA-23-1124 
       22.39         2.56        12.23        27.48        47.54        58.13 
TCGA-23-1809 TCGA-23-2643 TCGA-24-0966 TCGA-24-1464 TCGA-24-1565 TCGA-24-1604 
        0.53         4.70         7.63        12.46        10.26        88.34 
TCGA-24-1616 TCGA-24-1842 TCGA-24-1845 TCGA-25-1321 TCGA-25-1633 TCGA-25-1871 
       38.24         8.32         3.81        33.96        60.59        24.99 
TCGA-25-1877 TCGA-25-1878 TCGA-29-1691 TCGA-29-1774 TCGA-29-1784 TCGA-29-2432 
       18.05        85.05        47.18        17.29         5.36        11.84 
TCGA-31-1959 TCGA-36-1581 TCGA-36-2547 TCGA-36-2552 TCGA-59-2351 TCGA-59-2372 
        2.17        24.69        20.52        11.47       116.12        44.78 
TCGA-61-1738 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-2000 TCGA-61-2009 
       35.80        67.73        43.43        15.75        14.50        39.85 
TCGA-61-2101 TCGA-61-2111 
       55.50       125.72 

$`16P GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 
       18.51        11.87        65.49        63.06        48.76        21.57 
TCGA-04-1350 TCGA-04-1356 TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 
       63.98        49.28        32.52        44.32        33.67        76.54 
TCGA-04-1367 TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1530 TCGA-04-1536 
       71.47        56.55        41.59        19.99       119.08        29.06 
TCGA-04-1638 TCGA-04-1644 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 
       55.40        48.89        64.64        36.23        31.86        47.70 
TCGA-09-0366 TCGA-09-0367 TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 
       57.73        17.95         9.96        38.43        89.33        74.89 
TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 
       41.59        57.57        61.87        55.36        30.48        17.98 
TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 
        3.02         8.55        97.55         6.15         6.12        35.15 
TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 
        4.50       112.37        71.11        39.75        20.91        26.93 
TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 
       12.46        54.31        25.91        81.47        18.48        33.24 
TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0937 TCGA-10-0938 
       32.28        11.70         3.88        35.41        15.12        19.86 
TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0725 TCGA-13-0726 
        6.21        24.59        44.55        39.58        12.39        31.07 
TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 
       15.19        17.79        55.17         2.47        11.18        11.38 
TCGA-13-0760 TCGA-13-0761 TCGA-13-0762 TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 
       11.54        34.06        32.25        31.04        21.40         8.42 
TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 
       38.93        36.72        28.70        30.35        19.56         8.71 
TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 
        7.79         8.12         8.28         8.19        43.82        35.28 
TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 
       35.28        13.61        68.91       107.18        91.40        74.27 
TCGA-13-0887 TCGA-13-0888 TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 TCGA-13-0899 
       66.64        70.39        67.99        69.01        43.36        56.15 
TCGA-13-0900 TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 
       57.07        47.38        48.33        47.84        44.94        44.84 
TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 
       37.08        27.68        34.06        29.98        21.14        14.89 
TCGA-13-0920 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 
       13.81         6.41         6.08        10.88         6.61         7.36 
TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 
        6.05         5.92         6.84         4.70         4.21         5.33 
TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 
       54.61        87.06        61.71        29.39        98.04        20.68 
TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 
       70.82        82.88        52.44        73.55        38.17        49.22 
TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 
        4.24        54.31        37.61        38.37        13.97        32.84 
TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 TCGA-13-1511 
       16.57         4.21         4.41         4.77         4.14         3.88 
TCGA-13-1512 TCGA-13-2057 TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 
        3.09        14.24         8.58        10.78         8.75         6.28 
TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1683 TCGA-20-1684 
       23.05        25.94        26.20        72.20        25.38        19.07 
TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 
       16.67         2.93         2.66        42.51        40.54        15.39 
TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 
       26.83        31.73        49.41         8.81        29.10        18.87 
TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 
        2.24        51.35        54.51         3.22        31.20        68.68 
TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 
        4.57        33.30        86.01       129.96         4.27         6.38 
TCGA-23-1122 TCGA-23-1123 TCGA-23-2072 TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 
       39.09        33.47        24.95       115.89        87.48        91.66 
TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2645 TCGA-24-0968 TCGA-24-0970 
       77.00        49.84         2.76         4.50        19.63        11.64 
TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 
       21.80        41.56         7.66        22.32        54.08        63.55 
TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 
       47.41         6.31         6.38         7.82         7.99         7.86 
TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 
        0.76         6.25         6.02         5.95         5.36         4.80 
TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 
       17.36        28.34        19.17        18.67        43.53         8.55 
TCGA-24-1463 TCGA-24-1466 TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 
       72.92        45.14       105.99         9.11         3.42         1.18 
TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 
       22.19        26.96        57.37        64.27        16.21        56.58 
TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 
       41.06        51.91        41.39        58.09        88.50        70.62 
TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 
       39.88        19.53        44.09        45.50        47.70        25.87 
TCGA-24-1567 TCGA-24-1603 TCGA-24-1614 TCGA-24-1843 TCGA-24-1844 TCGA-24-1846 
       17.23        90.15        48.33         3.48         3.72         4.37 
TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 
       11.28         5.75         5.49         9.80        22.65        30.21 
TCGA-24-1927 TCGA-24-1928 TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 
       16.41        11.05        81.11         4.87       151.99        44.84 
TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 
       58.16        34.82       109.68        14.43        53.95        18.48 
TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 
       28.18        64.01        44.48        57.07        36.16         0.79 
TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 
        0.36        47.54        31.63        70.45        44.58         0.82 
TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 TCGA-24-2298 
       67.36        36.23        16.64        33.11        55.86        53.26 
TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 
        1.02        26.93        31.99        51.06        37.02         1.02 
TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 
       34.98        65.00        36.95         2.99        12.00         2.96 
TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 TCGA-25-1630 
       18.58        18.02        15.78         0.36        20.58         7.86 
TCGA-25-1631 TCGA-25-1632 TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 TCGA-25-2042 
        0.30        56.94        35.54        51.22        14.93        13.02 
TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 
       49.05         1.02        38.04         3.02        12.00        45.01 
TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 
       19.99        42.02         2.96        29.00        30.97        26.96 
TCGA-29-1688 TCGA-29-1690 TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 
       78.87        44.71       101.75        38.53         0.79        33.70 
TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 
       31.17        68.28         0.53        16.90        18.64        59.67 
TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 
       18.25        41.95        29.23        34.62        17.00        85.68 
TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 
       66.77        62.93        39.09        31.23        22.98        24.36 
TCGA-29-1771 TCGA-29-1775 TCGA-29-1776 TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 
       22.52        12.36        11.84        12.30        14.93         8.35 
TCGA-29-1783 TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 
        7.20        34.62        86.17        65.00        62.47        45.11 
TCGA-29-2429 TCGA-29-2431 TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 
        4.87        42.25        11.47         9.76        38.07        51.91 
TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 
       36.26         2.47        15.68         0.26        48.07        44.91 
TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 
       34.78         6.08        36.62         1.18        57.57        24.26 
TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 
       30.05        48.79        45.57        30.18        18.77        22.45 
TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 
        6.71        42.51        44.09        28.73        29.06        21.53 
TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 
       22.85        22.55         8.55        30.05        25.74        27.85 
TCGA-36-1580 TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 
       24.23        35.05        33.01        29.49        29.79        25.91 
TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 
       25.08        23.80        21.60         2.24        20.98        18.31 
TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 
       14.17         6.05        16.14        26.04        23.74         9.44 
TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 
        7.56         7.46        22.39         1.48        24.03        11.38 
TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 
       21.14         1.74        22.32        28.96        25.05        25.02 
TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 
      180.16        80.12        22.32         9.40        34.39         2.14 
TCGA-59-2363 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 
        5.39        11.11         8.05        20.94        31.40        18.54 
TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 
       27.88         4.34        31.76        28.47        48.79        44.84 
TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 
        2.43        33.67        43.69         1.41         8.42         5.79 
TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 
       11.41        13.02         9.07        34.13        31.30        37.02 
TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 
       42.48        48.92        56.58        38.17         1.97         5.52 
TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 
       17.98         3.98        30.61        30.64         1.18        45.96 
TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 
       45.40         4.80         4.77        51.72        71.74        61.64 
TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 
       58.39        60.62        65.49         6.48        76.83        20.68 
TCGA-61-2110 TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
       44.52        22.22         6.35        31.07         8.58 

  16P GAIN MUTATED 16P GAIN WILD-TYPE 
              0.53               0.26 
  16P GAIN MUTATED 16P GAIN WILD-TYPE 
            125.72             180.16 
  16P GAIN MUTATED 16P GAIN WILD-TYPE 
             28.26              28.18 
[1] "0.5 - 125.7 (28.3)" "0.3 - 180.2 (28.2)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "16P GAIN MUTATED"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "16P GAIN MUTATED"   "16P GAIN MUTATED"   "16P GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED"   "16P GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "16P GAIN MUTATED"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED"   "16P GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED"   "16P GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-2614 
"16P GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "16P GAIN MUTATED"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "16P GAIN MUTATED"   "16P GAIN MUTATED"   "16P GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED"   "16P GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "16P GAIN MUTATED"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED"   "16P GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED"   "16P GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-2614 
"16P GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "16P GAIN MUTATED"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "16P GAIN MUTATED"   "16P GAIN MUTATED"   "16P GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED"   "16P GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "16P GAIN MUTATED"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED"   "16P GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED"   "16P GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"16P GAIN WILD-TYPE"   "16P GAIN MUTATED" "16P GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "16P GAIN MUTATED" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE"   "16P GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" "16P GAIN WILD-TYPE" 
        TCGA-61-2614 
"16P GAIN WILD-TYPE" 
[1] "hr=" "1.1"
D28V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  16P GAIN MUTATED         0    58                0
  16P GAIN WILD-TYPE       2   490                2
D28V3, multiclass
                  clus
vv                 16P GAIN MUTATED 16P GAIN WILD-TYPE
  OMENTUM                         0                  2
  OVARY                          58                490
  PERITONEUM OVARY                0                  2
D28V4, continuous
D28V5, binary
                    cls
clus                   0   1
  16P GAIN MUTATED     0  58
  16P GAIN WILD-TYPE   3 501
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  16P GAIN MUTATED      0   58
  16P GAIN WILD-TYPE    3  501
     clus
vv    16P GAIN MUTATED 16P GAIN WILD-TYPE
  NO                 0                  3
  YES               58                501
                    vv
clus                 R0 R1 R2
  16P GAIN MUTATED    3  1  0
  16P GAIN WILD-TYPE 11 25  2
D28V6, multiclass
    clus
vv   16P GAIN MUTATED 16P GAIN WILD-TYPE
  R0                3                 11
  R1                1                 25
  R2                0                  2

Clustering(29) Variable = 16Q GAIN MUTATION ANALYSIS
D29V1, survival
                    sevent
clus2                  0   1
  16Q GAIN MUTATED    14  15
  16Q GAIN WILD-TYPE 247 271
  16Q GAIN MUTATED 16Q GAIN WILD-TYPE 
                29                518 
  16Q GAIN MUTATED 16Q GAIN WILD-TYPE 
                15                271 
$`16Q GAIN MUTATED`
TCGA-04-1542 TCGA-04-1646 TCGA-04-1648 TCGA-09-0364 TCGA-09-0369 TCGA-09-1672 
       84.20        27.88        28.64        29.16        35.54         5.85 
TCGA-13-0897 TCGA-13-0921 TCGA-13-1510 TCGA-13-2059 TCGA-23-1021 TCGA-24-1464 
       57.47         4.64         2.56        12.23        47.54        12.46 
TCGA-24-1604 TCGA-24-1616 TCGA-24-1845 TCGA-25-1321 TCGA-25-1633 TCGA-29-1774 
       88.34        38.24         3.81        33.96        60.59        17.29 
TCGA-31-1959 TCGA-36-1581 TCGA-36-2538 TCGA-36-2547 TCGA-59-2351 TCGA-59-2372 
        2.17        24.69        25.08        20.52       116.12        44.78 
TCGA-61-1738 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-2000 
       35.80        67.73        43.43        15.75        14.50 

$`16Q GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 
       18.51        11.87        65.49        63.06        48.76        21.57 
TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 
       63.98        65.46        49.28        32.52        44.32        33.67 
TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 
       76.54        71.47        82.36        56.55        41.59        19.99 
TCGA-04-1525 TCGA-04-1530 TCGA-04-1536 TCGA-04-1638 TCGA-04-1644 TCGA-04-1649 
       38.37       119.08        29.06        55.40        48.89        64.64 
TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 TCGA-04-1655 TCGA-09-0365 TCGA-09-0366 
       36.23        31.86        47.70        45.34         9.47        57.73 
TCGA-09-0367 TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 
       17.95         9.96        38.43        89.33        74.89        41.59 
TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 TCGA-09-1673 
       57.57        61.87        55.36        30.48        17.98         3.02 
TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 
        8.55        97.55         6.15         6.12        35.15         4.50 
TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 
      112.37        71.11        63.09        39.75        20.91        26.93 
TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 
       12.46        54.31        25.91        81.47        18.48        33.24 
TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 
       32.28        11.70         3.88        35.41        35.80        15.12 
TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 
       19.86         6.21        24.59        44.55        39.58         2.73 
TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 
       12.39        31.07        15.19        17.79        55.17         2.47 
TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 TCGA-13-0762 TCGA-13-0764 
       11.18        11.38        11.54        34.06        32.25        31.04 
TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 
       21.40         8.42        38.93        36.72        28.70        30.35 
TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 TCGA-13-0802 
       19.56         8.71         7.79         8.12         8.28         8.19 
TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 
       43.82        35.28        35.28        13.61        68.91       107.18 
TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 
       91.40        74.27        66.64        70.39        61.81        67.99 
TCGA-13-0891 TCGA-13-0893 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 
       69.01        43.36        56.15        57.07        19.36        47.38 
TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 
       48.33        47.84        44.94        44.84        37.08        27.68 
TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 TCGA-13-0923 
       34.06        29.98        21.14        14.89        13.81         6.41 
TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 
        6.08        10.88         6.61         7.36         6.05         5.92 
TCGA-13-1409 TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 
        6.84         4.70         4.21         5.33        54.61        87.06 
TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 
       61.71        29.39        98.04        20.68        22.39        70.82 
TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 
       82.88        52.44        73.55        38.17        49.22         4.24 
TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 
       54.31        37.61        38.37        13.97        32.84        16.57 
TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 TCGA-13-1511 TCGA-13-1512 
        4.21         4.41         4.77         4.14         3.88         3.09 
TCGA-13-2057 TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 
       14.24         8.58        10.78         8.75         6.28        23.05 
TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 
       25.94        26.20        72.20        27.48        25.38        19.07 
TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 
       16.67         2.93         2.66        42.51        40.54        15.39 
TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 
       26.83        31.73        49.41         8.81        29.10        18.87 
TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 
        2.24        51.35        54.51         3.22        31.20        68.68 
TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 
        4.57        33.30        86.01       129.96         4.27         6.38 
TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 TCGA-23-2072 TCGA-23-2077 
       39.09        33.47        58.13         0.53        24.95       115.89 
TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 
       87.48        91.66        77.00        49.84         2.76         4.70 
TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 
        4.50         7.63        19.63        11.64        21.80        41.56 
TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 
        7.66        22.32        54.08        63.55        47.41         6.31 
TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 
        6.38         7.82         7.99         7.86         0.76         6.25 
TCGA-24-1424 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 
        6.02         5.95         5.36         4.80        17.36        28.34 
TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 TCGA-24-1466 
       19.17        18.67        43.53         8.55        72.92        45.14 
TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 
      105.99         9.11         3.42         1.18        22.19        26.96 
TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 
       57.37        64.27        16.21        56.58        41.06        51.91 
TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 
       41.39        58.09        88.50        70.62        39.88        19.53 
TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 
       44.09        45.50        47.70        25.87        10.26        17.23 
TCGA-24-1603 TCGA-24-1614 TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 TCGA-24-1846 
       90.15        48.33         8.32         3.48         3.72         4.37 
TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 
       11.28         5.75         5.49         9.80        22.65        30.21 
TCGA-24-1927 TCGA-24-1928 TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 
       16.41        11.05        81.11         4.87       151.99        44.84 
TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 
       58.16        34.82       109.68        14.43        53.95        18.48 
TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 
       28.18        64.01        44.48        57.07        36.16         0.79 
TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 
        0.36        47.54        31.63        70.45        44.58         0.82 
TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 TCGA-24-2298 
       67.36        36.23        16.64        33.11        55.86        53.26 
TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 
        1.02        26.93        31.99        51.06        37.02         1.02 
TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 
       34.98        65.00        36.95         2.99        12.00         2.96 
TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 TCGA-25-1630 
       18.58        18.02        15.78         0.36        20.58         7.86 
TCGA-25-1631 TCGA-25-1632 TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 
        0.30        56.94        35.54        51.22        14.93        24.99 
TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 
       18.05        85.05        13.02        49.05         1.02        38.04 
TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 
        3.02        12.00        45.01        19.99        42.02         2.96 
TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 
       29.00        30.97        26.96        78.87        44.71        47.18 
TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 
      101.75        38.53         0.79        33.70        31.17        68.28 
TCGA-29-1699 TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 
        0.53        16.90        18.64        59.67        18.25        41.95 
TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 
       29.23        34.62        17.00        85.68        66.77        62.93 
TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 TCGA-29-1775 
       39.09        31.23        22.98        24.36        22.52        12.36 
TCGA-29-1776 TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 
       11.84        12.30        14.93         8.35         7.20         5.36 
TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 
       34.62        86.17        65.00        62.47        45.11         4.87 
TCGA-29-2431 TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 
       42.25        11.84        11.47         9.76        38.07        51.91 
TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 
       36.26         2.47        15.68         0.26        48.07        44.91 
TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 
       34.78         6.08        36.62         1.18        57.57        24.26 
TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 
       30.05        48.79        45.57        30.18        18.77        22.45 
TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 
        6.71        42.51        44.09        28.73        29.06        21.53 
TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 
       22.85        22.55         8.55        30.05        25.74        27.85 
TCGA-36-1580 TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 
       24.23        35.05        33.01        29.49        29.79        25.91 
TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2548 
       23.80        21.60         2.24        20.98        18.31        14.17 
TCGA-36-2549 TCGA-36-2551 TCGA-36-2552 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 
        6.05        16.14        11.47        26.04        23.74         9.44 
TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 
        7.56         7.46        22.39         1.48        24.03        11.38 
TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 
       21.14         1.74        22.32        28.96        25.05        25.02 
TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 
      180.16        80.12        22.32         9.40        34.39         2.14 
TCGA-59-2363 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 
        5.39        11.11         8.05        20.94        31.40        18.54 
TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 
       27.88         4.34        31.76        28.47        48.79        44.84 
TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 
        2.43        33.67        43.69         1.41         8.42         5.79 
TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 
       11.41        13.02         9.07        34.13        31.30        37.02 
TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 
       42.48        48.92        56.58        38.17         1.97         5.52 
TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 
       17.98         3.98        30.61        39.85        30.64         1.18 
TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 
       45.96        45.40         4.80         4.77        51.72        71.74 
TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 
       61.64        58.39        60.62        65.49        55.50         6.48 
TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 
       76.83        20.68        44.52       125.72        22.22         6.35 
TCGA-61-2613 TCGA-61-2614 
       31.07         8.58 

  16Q GAIN MUTATED 16Q GAIN WILD-TYPE 
              2.17               0.26 
  16Q GAIN MUTATED 16Q GAIN WILD-TYPE 
            116.12             180.16 
  16Q GAIN MUTATED 16Q GAIN WILD-TYPE 
             28.64              28.03 
[1] "2.2 - 116.1 (28.6)" "0.3 - 180.2 (28.0)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "16Q GAIN MUTATED"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED"   "16Q GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"16Q GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "16Q GAIN MUTATED"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED"   "16Q GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"16Q GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "16Q GAIN MUTATED"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED"   "16Q GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"16Q GAIN WILD-TYPE"   "16Q GAIN MUTATED" "16Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"16Q GAIN WILD-TYPE" 
[1] "hr=" "1.1"
D29V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  16Q GAIN MUTATED         0    31                0
  16Q GAIN WILD-TYPE       2   517                2
D29V3, multiclass
                  clus
vv                 16Q GAIN MUTATED 16Q GAIN WILD-TYPE
  OMENTUM                         0                  2
  OVARY                          31                517
  PERITONEUM OVARY                0                  2
D29V4, continuous
[1] "Remove cluster labels:" "16Q GAIN MUTATED"      
clus
  16Q GAIN MUTATED 16Q GAIN WILD-TYPE 
                 2                 74 
        TCGA-04-1346         TCGA-04-1347         TCGA-04-1351 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-04-1356         TCGA-04-1367         TCGA-10-0925 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-10-0926         TCGA-13-0714         TCGA-13-0720 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0724         TCGA-13-0755         TCGA-13-0757 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0758         TCGA-13-0760         TCGA-13-0762 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0764         TCGA-13-0768         TCGA-13-0791 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0801         TCGA-13-0802         TCGA-13-0885 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0887         TCGA-13-0888         TCGA-13-0889 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0900         TCGA-13-0901 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0910         TCGA-13-0911 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-0912         TCGA-13-0913         TCGA-13-0919 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1404         TCGA-13-1405         TCGA-13-1409 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1412         TCGA-13-1482 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1488         TCGA-13-1489         TCGA-13-1491 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1492         TCGA-13-1495         TCGA-13-1497 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1506 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1507         TCGA-13-1509         TCGA-13-1511 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-1512         TCGA-13-2057         TCGA-13-2060 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2071         TCGA-24-1614 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
        TCGA-24-1930         TCGA-61-2101 
"16Q GAIN WILD-TYPE" "16Q GAIN WILD-TYPE" 
D29V5, binary
                    cls
clus                   0   1
  16Q GAIN MUTATED     0  31
  16Q GAIN WILD-TYPE   3 528
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  16Q GAIN MUTATED      0   31
  16Q GAIN WILD-TYPE    3  528
     clus
vv    16Q GAIN MUTATED 16Q GAIN WILD-TYPE
  NO                 0                  3
  YES               31                528
                    vv
clus                 R0 R1 R2
  16Q GAIN MUTATED    2  1  0
  16Q GAIN WILD-TYPE 12 25  2
D29V6, multiclass
    clus
vv   16Q GAIN MUTATED 16Q GAIN WILD-TYPE
  R0                2                 12
  R1                1                 25
  R2                0                  2

Clustering(30) Variable = 17P GAIN MUTATION ANALYSIS
D30V1, survival
                    sevent
clus2                  0   1
  17P GAIN MUTATED    16   3
  17P GAIN WILD-TYPE 245 283
  17P GAIN MUTATED 17P GAIN WILD-TYPE 
                19                528 
  17P GAIN MUTATED 17P GAIN WILD-TYPE 
                 3                283 
$`17P GAIN MUTATED`
TCGA-09-2051 TCGA-13-0800 TCGA-13-0897 TCGA-13-0920 TCGA-13-1411 TCGA-13-1412 
       63.09         8.12        57.47        13.81         4.21         5.33 
TCGA-13-2057 TCGA-13-2060 TCGA-20-1683 TCGA-23-1114 TCGA-29-1763 TCGA-29-2429 
       14.24         8.58        25.38        68.68        66.77         4.87 
TCGA-36-1569 TCGA-36-1578 TCGA-36-1580 TCGA-36-1581 TCGA-36-2552 TCGA-61-1900 
       29.06        27.85        24.23        24.69        11.47         5.79 
TCGA-61-1904 
        9.07 

$`17P GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 
       18.51        11.87        65.49        63.06        48.76        21.57 
TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 
       63.98        65.46        49.28        32.52        44.32        33.67 
TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 
       76.54        71.47        82.36        56.55        41.59        19.99 
TCGA-04-1525 TCGA-04-1530 TCGA-04-1536 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 
       38.37       119.08        29.06        84.20        55.40        48.89 
TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 
       27.88        28.64        64.64        36.23        31.86        47.70 
TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 
       45.34        29.16         9.47        57.73        17.95        35.54 
TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 
        9.96        38.43        89.33        74.89        41.59        57.57 
TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 
       61.87        55.36        30.48        17.98         5.85         3.02 
TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 
        8.55        97.55         6.15         6.12        35.15         4.50 
TCGA-09-2049 TCGA-09-2050 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 
      112.37        71.11        39.75        20.91        26.93        12.46 
TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 
       54.31        25.91        81.47        18.48        33.24        32.28 
TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 
       11.70         3.88        35.41        35.80        15.12        19.86 
TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 TCGA-13-0725 
        6.21        24.59        44.55        39.58         2.73        12.39 
TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 TCGA-13-0757 
       31.07        15.19        17.79        55.17         2.47        11.18 
TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 TCGA-13-0762 TCGA-13-0764 TCGA-13-0766 
       11.38        11.54        34.06        32.25        31.04        21.40 
TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 
        8.42        38.93        36.72        28.70        30.35        19.56 
TCGA-13-0797 TCGA-13-0799 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 
        8.71         7.79         8.28         8.19        43.82        35.28 
TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 
       35.28        13.61        68.91       107.18        91.40        74.27 
TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 
       66.64        70.39        61.81        67.99        69.01        43.36 
TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 
       56.15        57.07        19.36        47.38        48.33        47.84 
TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 
       44.94        44.84        37.08        27.68        34.06        29.98 
TCGA-13-0916 TCGA-13-0919 TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 
       21.14        14.89         4.64         6.41         6.08        10.88 
TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 
        6.61         7.36         6.05         5.92         6.84         4.70 
TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 
       54.61        87.06        61.71        29.39        98.04        20.68 
TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 
       22.39        70.82        82.88        52.44        73.55        38.17 
TCGA-13-1495 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 
       49.22         4.24        54.31        37.61        38.37        13.97 
TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 
       32.84        16.57         4.21         4.41         4.77         4.14 
TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2059 TCGA-13-2061 TCGA-13-2065 
        2.56         3.88         3.09        12.23        10.78         8.75 
TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 
        6.28        23.05        25.94        26.20        72.20        27.48 
TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 TCGA-23-1022 
       19.07        16.67         2.93         2.66        47.54        42.51 
TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 
       40.54        15.39        26.83        31.73        49.41         8.81 
TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 
       29.10        18.87         2.24        51.35        54.51         3.22 
TCGA-23-1113 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 TCGA-23-1120 
       31.20         4.57        33.30        86.01       129.96         4.27 
TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 TCGA-23-2072 
        6.38        39.09        33.47        58.13         0.53        24.95 
TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 
      115.89        87.48        91.66        77.00        49.84         2.76 
TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 
        4.70         4.50         7.63        19.63        11.64        21.80 
TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 
       41.56         7.66        22.32        54.08        63.55        47.41 
TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 
        6.31         6.38         7.82         7.99         7.86         0.76 
TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 
        6.25         6.02         5.95         5.36         4.80        17.36 
TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 
       28.34        19.17        18.67        43.53         8.55        72.92 
TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 
       12.46        45.14       105.99         9.11         3.42         1.18 
TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 
       22.19        26.96        57.37        64.27        16.21        56.58 
TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 
       41.06        51.91        41.39        58.09        88.50        70.62 
TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 
       39.88        19.53        44.09        45.50        47.70        25.87 
TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 
       10.26        17.23        90.15        88.34        48.33        38.24 
TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 
        8.32         3.48         3.72         3.81         4.37        11.28 
TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 
        5.75         5.49         9.80        22.65        30.21        16.41 
TCGA-24-1928 TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 
       11.05        81.11         4.87       151.99        44.84        58.16 
TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 
       34.82       109.68        14.43        53.95        18.48        28.18 
TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 TCGA-24-2262 
       64.01        44.48        57.07        36.16         0.79         0.36 
TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 
       47.54        31.63        70.45        44.58         0.82        67.36 
TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 TCGA-24-2298 TCGA-25-1312 
       36.23        16.64        33.11        55.86        53.26         1.02 
TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 
       26.93        31.99        51.06        37.02         1.02        34.98 
TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 
       65.00        36.95        33.96         2.99        12.00         2.96 
TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 TCGA-25-1630 
       18.58        18.02        15.78         0.36        20.58         7.86 
TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 
        0.30        56.94        60.59        35.54        51.22        14.93 
TCGA-25-1871 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 
       24.99        18.05        85.05        13.02        49.05         1.02 
TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 
       38.04         3.02        12.00        45.01        19.99        42.02 
TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 
        2.96        29.00        30.97        26.96        78.87        44.71 
TCGA-29-1691 TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 
       47.18       101.75        38.53         0.79        33.70        31.17 
TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 
       68.28         0.53        16.90        18.64        59.67        18.25 
TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 TCGA-29-1764 
       41.95        29.23        34.62        17.00        85.68        62.93 
TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 
       39.09        31.23        22.98        24.36        22.52        17.29 
TCGA-29-1775 TCGA-29-1776 TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 
       12.36        11.84        12.30        14.93         8.35         7.20 
TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 
        5.36        34.62        86.17        65.00        62.47        45.11 
TCGA-29-2431 TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 
       42.25        11.84        11.47         9.76        38.07        51.91 
TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 
       36.26         2.47        15.68         0.26        48.07        44.91 
TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 
       34.78         6.08        36.62         1.18        57.57        24.26 
TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 
       30.05        48.79        45.57        30.18        18.77        22.45 
TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1570 
        6.71        42.51        44.09         2.17        28.73        21.53 
TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 TCGA-36-2529 
       22.85        22.55         8.55        30.05        25.74        35.05 
TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 
       33.01        29.49        29.79        25.91        25.08        23.80 
TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 TCGA-36-2548 
       21.60         2.24        20.98        18.31        20.52        14.17 
TCGA-36-2549 TCGA-36-2551 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 TCGA-42-2589 
        6.05        16.14        26.04        23.74         9.44         7.56 
TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 
        7.46        22.39         1.48        24.03        11.38        21.14 
TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 
        1.74        22.32        28.96        25.05        25.02       180.16 
TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 
       80.12        22.32       116.12         9.40        34.39         2.14 
TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 
        5.39        44.78        11.11         8.05        20.94        31.40 
TCGA-61-1727 TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 
       18.54        27.88         4.34        31.76        28.47        48.79 
TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 
       44.84        35.80         2.43        33.67        43.69         1.41 
TCGA-61-1899 TCGA-61-1901 TCGA-61-1903 TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 
        8.42        11.41        13.02        34.13        31.30        37.02 
TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 
       42.48        48.92        56.58        67.73        43.43        15.75 
TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 
       38.17         1.97         5.52        14.50        17.98         3.98 
TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 
       30.61        39.85        30.64         1.18        45.96        45.40 
TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 
        4.80         4.77        51.72        71.74        61.64        58.39 
TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 
       60.62        65.49        55.50         6.48        76.83        20.68 
TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
       44.52       125.72        22.22         6.35        31.07         8.58 

  17P GAIN MUTATED 17P GAIN WILD-TYPE 
              4.21               0.26 
  17P GAIN MUTATED 17P GAIN WILD-TYPE 
             68.68             180.16 
  17P GAIN MUTATED 17P GAIN WILD-TYPE 
            14.240             28.715 
[1] "4.2 - 68.7 (14.2)"  "0.3 - 180.2 (28.7)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE"   "17P GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "17P GAIN MUTATED" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE"   "17P GAIN MUTATED" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE"   "17P GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"17P GAIN WILD-TYPE"   "17P GAIN MUTATED"   "17P GAIN MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "17P GAIN MUTATED" "17P GAIN WILD-TYPE"   "17P GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE"   "17P GAIN MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"17P GAIN WILD-TYPE"   "17P GAIN MUTATED" "17P GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "17P GAIN MUTATED" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE"   "17P GAIN MUTATED" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE"   "17P GAIN MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "17P GAIN MUTATED"   "17P GAIN MUTATED"   "17P GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "17P GAIN MUTATED" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
  "17P GAIN MUTATED" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "17P GAIN MUTATED" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2614 
"17P GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE"   "17P GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "17P GAIN MUTATED" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE"   "17P GAIN MUTATED" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE"   "17P GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"17P GAIN WILD-TYPE"   "17P GAIN MUTATED"   "17P GAIN MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "17P GAIN MUTATED" "17P GAIN WILD-TYPE"   "17P GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE"   "17P GAIN MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"17P GAIN WILD-TYPE"   "17P GAIN MUTATED" "17P GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "17P GAIN MUTATED" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE"   "17P GAIN MUTATED" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE"   "17P GAIN MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "17P GAIN MUTATED"   "17P GAIN MUTATED"   "17P GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "17P GAIN MUTATED" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
  "17P GAIN MUTATED" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "17P GAIN MUTATED" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2614 
"17P GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE"   "17P GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "17P GAIN MUTATED" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE"   "17P GAIN MUTATED" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE"   "17P GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"17P GAIN WILD-TYPE"   "17P GAIN MUTATED"   "17P GAIN MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "17P GAIN MUTATED" "17P GAIN WILD-TYPE"   "17P GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE"   "17P GAIN MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"17P GAIN WILD-TYPE"   "17P GAIN MUTATED" "17P GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "17P GAIN MUTATED" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE"   "17P GAIN MUTATED" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE"   "17P GAIN MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "17P GAIN MUTATED"   "17P GAIN MUTATED"   "17P GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "17P GAIN MUTATED" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
  "17P GAIN MUTATED" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "17P GAIN MUTATED" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2614 
"17P GAIN WILD-TYPE" 
[1] "hr=" "2.5"
D30V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  17P GAIN MUTATED         0    20                0
  17P GAIN WILD-TYPE       2   528                2
D30V3, multiclass
                  clus
vv                 17P GAIN MUTATED 17P GAIN WILD-TYPE
  OMENTUM                         0                  2
  OVARY                          20                528
  PERITONEUM OVARY                0                  2
D30V4, continuous
D30V5, binary
                    cls
clus                   0   1
  17P GAIN MUTATED     0  21
  17P GAIN WILD-TYPE   3 538
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  17P GAIN MUTATED      0   21
  17P GAIN WILD-TYPE    3  538
     clus
vv    17P GAIN MUTATED 17P GAIN WILD-TYPE
  NO                 0                  3
  YES               21                538
                    vv
clus                 R0 R1 R2
  17P GAIN MUTATED    1  1  0
  17P GAIN WILD-TYPE 13 25  2
D30V6, multiclass
[1] "Remove cluster labels:" "17P GAIN MUTATED"      
clus
  17P GAIN MUTATED 17P GAIN WILD-TYPE 
                 2                 40 
        TCGA-04-1516         TCGA-04-1644         TCGA-13-0807 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-24-2033         TCGA-29-2414 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-2425         TCGA-29-2427         TCGA-29-2428 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-36-2529         TCGA-36-2530 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-2532         TCGA-36-2534         TCGA-36-2537 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-2538         TCGA-36-2540         TCGA-36-2542 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-2543         TCGA-36-2544         TCGA-36-2545 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-2547         TCGA-36-2548         TCGA-36-2549 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-36-2551         TCGA-42-2582         TCGA-42-2587 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-42-2593         TCGA-57-1993         TCGA-59-2363 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-2612         TCGA-61-2613 
"17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" "17P GAIN WILD-TYPE" 
        TCGA-61-2614 
"17P GAIN WILD-TYPE" 

Clustering(31) Variable = 17Q GAIN MUTATION ANALYSIS
D31V1, survival
                    sevent
clus2                  0   1
  17Q GAIN MUTATED    25  20
  17Q GAIN WILD-TYPE 236 266
  17Q GAIN MUTATED 17Q GAIN WILD-TYPE 
                45                502 
  17Q GAIN MUTATED 17Q GAIN WILD-TYPE 
                20                266 
$`17Q GAIN MUTATED`
TCGA-04-1337 TCGA-04-1530 TCGA-09-0369 TCGA-09-2051 TCGA-10-0936 TCGA-13-0760 
        2.01       119.08        35.54        63.09        35.80        11.54 
TCGA-13-0768 TCGA-13-0800 TCGA-13-0897 TCGA-13-0920 TCGA-13-1408 TCGA-13-1411 
        8.42         8.12        57.47        13.81         5.92         4.21 
TCGA-13-1412 TCGA-13-1477 TCGA-13-1483 TCGA-13-1489 TCGA-13-2057 TCGA-13-2060 
        5.33        54.61        29.39        82.88        14.24         8.58 
TCGA-23-1109 TCGA-23-1114 TCGA-24-1464 TCGA-24-1563 TCGA-24-1844 TCGA-24-1845 
       51.35        68.68        12.46        47.70         3.72         3.81 
TCGA-24-1850 TCGA-24-2020 TCGA-25-1319 TCGA-25-2392 TCGA-29-1699 TCGA-29-1785 
        5.49       151.99        65.00         1.02         0.53        34.62 
TCGA-36-1569 TCGA-36-1570 TCGA-36-1574 TCGA-36-1578 TCGA-36-1580 TCGA-36-1581 
       29.06        21.53        22.55        27.85        24.23        24.69 
TCGA-36-2543 TCGA-36-2552 TCGA-42-2588 TCGA-42-2593 TCGA-61-1737 TCGA-61-1900 
        2.24        11.47         9.44         1.48        44.84         5.79 
TCGA-61-1913 TCGA-61-1914 TCGA-61-2098 
       48.92        56.58        65.49 

$`17Q GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1338 TCGA-04-1342 
       40.24        41.00         1.81        49.15        46.62        18.51 
TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 
       11.87        65.49        63.06        48.76        21.57        63.98 
TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 
       65.46        49.28        32.52        44.32        33.67        76.54 
TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 
       71.47        82.36        56.55        41.59        19.99        38.37 
TCGA-04-1536 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 TCGA-04-1648 
       29.06        84.20        55.40        48.89        27.88        28.64 
TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 TCGA-04-1655 TCGA-09-0364 
       64.64        36.23        31.86        47.70        45.34        29.16 
TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 
        9.47        57.73        17.95         9.96        38.43        89.33 
TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 
       74.89        41.59        57.57        61.87        55.36        30.48 
TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 
       17.98         5.85         3.02         8.55        97.55         6.15 
TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2053 
        6.12        35.15         4.50       112.37        71.11        39.75 
TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 
       20.91        26.93        12.46        54.31        25.91        81.47 
TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 
       18.48        33.24        32.28        11.70         3.88        35.41 
TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 
       15.12        19.86         6.21        24.59        44.55        39.58 
TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 
        2.73        12.39        31.07        15.19        17.79        55.17 
TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 TCGA-13-0761 TCGA-13-0762 TCGA-13-0764 
        2.47        11.18        11.38        34.06        32.25        31.04 
TCGA-13-0766 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 
       21.40        38.93        36.72        28.70        30.35        19.56 
TCGA-13-0797 TCGA-13-0799 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 
        8.71         7.79         8.28         8.19        43.82        35.28 
TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 
       35.28        13.61        68.91       107.18        91.40        74.27 
TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 
       66.64        70.39        61.81        67.99        69.01        43.36 
TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 
       56.15        57.07        19.36        47.38        48.33        47.84 
TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 
       44.94        44.84        37.08        27.68        34.06        29.98 
TCGA-13-0916 TCGA-13-0919 TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 
       21.14        14.89         4.64         6.41         6.08        10.88 
TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 TCGA-13-1409 TCGA-13-1410 TCGA-13-1481 
        6.61         7.36         6.05         6.84         4.70        87.06 
TCGA-13-1482 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 TCGA-13-1491 
       61.71        98.04        20.68        22.39        70.82        52.44 
TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 
       73.55        38.17        49.22         4.24        54.31        37.61 
TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 
       38.37        13.97        32.84        16.57         4.21         4.41 
TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2059 
        4.77         4.14         2.56         3.88         3.09        12.23 
TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 
       10.78         8.75         6.28        23.05        25.94        26.20 
TCGA-20-0996 TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 
       72.20        27.48        25.38        19.07        16.67         2.93 
TCGA-20-1687 TCGA-23-1021 TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 
        2.66        47.54        42.51        40.54        15.39        26.83 
TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 
       31.73        49.41         8.81        29.10        18.87         2.24 
TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 
       54.51         3.22        31.20         4.57        33.30        86.01 
TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 
      129.96         4.27         6.38        39.09        33.47        58.13 
TCGA-23-1809 TCGA-23-2072 TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 
        0.53        24.95       115.89        87.48        91.66        77.00 
TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 
       49.84         2.76         4.70         4.50         7.63        19.63 
TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 
       11.64        21.80        41.56         7.66        22.32        54.08 
TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 
       63.55        47.41         6.31         6.38         7.82         7.99 
TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 TCGA-24-1426 
        7.86         0.76         6.25         6.02         5.95         5.36 
TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 
        4.80        17.36        28.34        19.17        18.67        43.53 
TCGA-24-1436 TCGA-24-1463 TCGA-24-1466 TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 
        8.55        72.92        45.14       105.99         9.11         3.42 
TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 
        1.18        22.19        26.96        57.37        64.27        16.21 
TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 
       56.58        41.06        51.91        41.39        58.09        88.50 
TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 TCGA-24-1564 
       70.62        39.88        19.53        44.09        45.50        25.87 
TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 
       10.26        17.23        90.15        88.34        48.33        38.24 
TCGA-24-1842 TCGA-24-1843 TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 TCGA-24-1920 
        8.32         3.48         4.37        11.28         5.75         9.80 
TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 TCGA-24-1930 TCGA-24-2019 
       22.65        30.21        16.41        11.05        81.11         4.87 
TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 
       44.84        58.16        34.82       109.68        14.43        53.95 
TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 
       18.48        28.18        64.01        44.48        57.07        36.16 
TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 
        0.79         0.36        47.54        31.63        70.45        44.58 
TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 
        0.82        67.36        36.23        16.64        33.11        55.86 
TCGA-24-2298 TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 
       53.26         1.02        26.93        31.99        51.06        37.02 
TCGA-25-1317 TCGA-25-1318 TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 
        1.02        34.98        36.95        33.96         2.99        12.00 
TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 
        2.96        18.58        18.02        15.78         0.36        20.58 
TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 TCGA-25-1635 
        7.86         0.30        56.94        60.59        35.54        51.22 
TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 
       14.93        24.99        18.05        85.05        13.02        49.05 
TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 
       38.04         3.02        12.00        45.01        19.99        42.02 
TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 
        2.96        29.00        30.97        26.96        78.87        44.71 
TCGA-29-1691 TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 
       47.18       101.75        38.53         0.79        33.70        31.17 
TCGA-29-1698 TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 
       68.28        16.90        18.64        59.67        18.25        41.95 
TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 
       29.23        34.62        17.00        85.68        66.77        62.93 
TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 
       39.09        31.23        22.98        24.36        22.52        17.29 
TCGA-29-1775 TCGA-29-1776 TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 
       12.36        11.84        12.30        14.93         8.35         7.20 
TCGA-29-1784 TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 
        5.36        86.17        65.00        62.47        45.11         4.87 
TCGA-29-2431 TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 
       42.25        11.84        11.47         9.76        38.07        51.91 
TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 
       36.26         2.47        15.68         0.26        48.07        44.91 
TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 
       34.78         6.08        36.62         1.18        57.57        24.26 
TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 
       30.05        48.79        45.57        30.18        18.77        22.45 
TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1571 
        6.71        42.51        44.09         2.17        28.73        22.85 
TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 
        8.55        30.05        25.74        35.05        33.01        29.49 
TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2544 
       29.79        25.91        25.08        23.80        21.60        20.98 
TCGA-36-2545 TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 TCGA-42-2582 
       18.31        20.52        14.17         6.05        16.14        26.04 
TCGA-42-2587 TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-57-1582 TCGA-57-1583 
       23.74         7.56         7.46        22.39        24.03        11.38 
TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 
       21.14         1.74        22.32        28.96        25.05        25.02 
TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 TCGA-59-2354 
      180.16        80.12        22.32       116.12         9.40        34.39 
TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 
        2.14         5.39        44.78        11.11         8.05        20.94 
TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 
       31.40        18.54        27.88         4.34        31.76        28.47 
TCGA-61-1736 TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 
       48.79        35.80         2.43        33.67        43.69         1.41 
TCGA-61-1899 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 TCGA-61-1907 
        8.42        11.41        13.02         9.07        34.13        31.30 
TCGA-61-1910 TCGA-61-1911 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 
       37.02        42.48        67.73        43.43        15.75        38.17 
TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 
        1.97         5.52        14.50        17.98         3.98        30.61 
TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 
       39.85        30.64         1.18        45.96        45.40         4.80 
TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 
        4.77        51.72        71.74        61.64        58.39        60.62 
TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 
       55.50         6.48        76.83        20.68        44.52       125.72 
TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
       22.22         6.35        31.07         8.58 

  17Q GAIN MUTATED 17Q GAIN WILD-TYPE 
              0.53               0.26 
  17Q GAIN MUTATED 17Q GAIN WILD-TYPE 
            151.99             180.16 
  17Q GAIN MUTATED 17Q GAIN WILD-TYPE 
             22.55              28.67 
[1] "0.5 - 152.0 (22.6)" "0.3 - 180.2 (28.7)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED"   "17Q GAIN MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "17Q GAIN MUTATED"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "17Q GAIN MUTATED"   "17Q GAIN MUTATED"   "17Q GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"17Q GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED"   "17Q GAIN MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "17Q GAIN MUTATED"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "17Q GAIN MUTATED"   "17Q GAIN MUTATED"   "17Q GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"17Q GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED"   "17Q GAIN MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "17Q GAIN MUTATED"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "17Q GAIN MUTATED"   "17Q GAIN MUTATED"   "17Q GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "17Q GAIN MUTATED" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE"   "17Q GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" "17Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"17Q GAIN WILD-TYPE" 
[1] "hr=" "1.2"
D31V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  17Q GAIN MUTATED         0    46                0
  17Q GAIN WILD-TYPE       2   502                2
D31V3, multiclass
                  clus
vv                 17Q GAIN MUTATED 17Q GAIN WILD-TYPE
  OMENTUM                         0                  2
  OVARY                          46                502
  PERITONEUM OVARY                0                  2
D31V4, continuous
D31V5, binary
                    cls
clus                   0   1
  17Q GAIN MUTATED     0  46
  17Q GAIN WILD-TYPE   3 513
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  17Q GAIN MUTATED      0   46
  17Q GAIN WILD-TYPE    3  513
     clus
vv    17Q GAIN MUTATED 17Q GAIN WILD-TYPE
  NO                 0                  3
  YES               46                513
                    vv
clus                 R0 R1 R2
  17Q GAIN MUTATED    1  1  2
  17Q GAIN WILD-TYPE 13 25  0
D31V6, multiclass
    clus
vv   17Q GAIN MUTATED 17Q GAIN WILD-TYPE
  R0                1                 13
  R1                1                 25
  R2                2                  0

Clustering(32) Variable = 18P GAIN MUTATION ANALYSIS
D32V1, survival
                    sevent
clus2                  0   1
  18P GAIN MUTATED    60  48
  18P GAIN WILD-TYPE 201 238
  18P GAIN MUTATED 18P GAIN WILD-TYPE 
               108                439 
  18P GAIN MUTATED 18P GAIN WILD-TYPE 
                48                238 
$`18P GAIN MUTATED`
TCGA-04-1332 TCGA-04-1346 TCGA-04-1347 TCGA-04-1349 TCGA-04-1361 TCGA-04-1371 
       41.00        65.49        63.06        21.57        32.52        82.36 
TCGA-04-1516 TCGA-04-1525 TCGA-04-1536 TCGA-04-1542 TCGA-04-1644 TCGA-04-1652 
       41.59        38.37        29.06        84.20        48.89        31.86 
TCGA-09-0369 TCGA-09-1665 TCGA-09-1668 TCGA-09-2055 TCGA-10-0930 TCGA-10-0937 
       35.54        41.59        55.36        26.93        33.24        15.12 
TCGA-13-0762 TCGA-13-0768 TCGA-13-0795 TCGA-13-0802 TCGA-13-0885 TCGA-13-0888 
       32.25         8.42        19.56         8.19        91.40        70.39 
TCGA-13-0890 TCGA-13-0899 TCGA-13-0901 TCGA-13-0904 TCGA-13-1407 TCGA-13-1408 
       67.99        56.15        19.36        48.33         6.05         5.92 
TCGA-13-1410 TCGA-13-1481 TCGA-13-1489 TCGA-13-1497 TCGA-13-1504 TCGA-13-1507 
        4.70        87.06        82.88        54.31        16.57         4.77 
TCGA-13-1510 TCGA-13-2059 TCGA-13-2060 TCGA-20-0987 TCGA-20-1682 TCGA-20-1686 
        2.56        12.23         8.58        23.05        27.48         2.93 
TCGA-23-1022 TCGA-23-1024 TCGA-23-1110 TCGA-23-1114 TCGA-23-1121 TCGA-23-1123 
       42.51        15.39        54.51        68.68         6.38        33.47 
TCGA-23-1124 TCGA-23-1809 TCGA-23-2077 TCGA-24-0968 TCGA-24-1428 TCGA-24-1430 
       58.13         0.53       115.89        19.63        17.36        28.34 
TCGA-24-1434 TCGA-24-1466 TCGA-24-1558 TCGA-24-1567 TCGA-24-1616 TCGA-24-1844 
       18.67        45.14        19.53        17.23        38.24         3.72 
TCGA-24-1845 TCGA-24-1850 TCGA-24-1924 TCGA-24-2020 TCGA-24-2026 TCGA-24-2030 
        3.81         5.49        30.21       151.99        34.82        53.95 
TCGA-24-2261 TCGA-24-2289 TCGA-25-1314 TCGA-25-1318 TCGA-25-1319 TCGA-25-1321 
        0.79        67.36        31.99        34.98        65.00        33.96 
TCGA-25-1623 TCGA-25-1628 TCGA-25-1635 TCGA-25-1871 TCGA-25-2400 TCGA-29-1695 
       18.58        20.58        51.22        24.99        42.02         0.79 
TCGA-29-1711 TCGA-29-1778 TCGA-29-1784 TCGA-29-2425 TCGA-29-2432 TCGA-30-1866 
       34.62        14.93         5.36        65.00        11.84        36.62 
TCGA-31-1959 TCGA-36-1581 TCGA-36-2537 TCGA-36-2547 TCGA-42-2589 TCGA-57-1583 
        2.17        24.69        25.91        20.52         7.56        11.38 
TCGA-57-1586 TCGA-57-1992 TCGA-57-1994 TCGA-59-2352 TCGA-59-2355 TCGA-61-1722 
       22.32        28.96        25.02         9.40         2.14         8.05 
TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 TCGA-61-1899 TCGA-61-1907 TCGA-61-1917 
       27.88         4.34        31.76         8.42        31.30        43.43 
TCGA-61-2008 TCGA-61-2012 TCGA-61-2018 TCGA-61-2096 TCGA-61-2111 TCGA-61-2614 
       30.61        30.64        45.40        58.39       125.72         8.58 

$`18P GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 TCGA-04-1342 
       40.24         1.81        49.15         2.01        46.62        18.51 
TCGA-04-1343 TCGA-04-1348 TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1362 
       11.87        48.76        63.98        65.46        49.28        44.32 
TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1514 TCGA-04-1517 TCGA-04-1530 
       33.67        76.54        71.47        56.55        19.99       119.08 
TCGA-04-1638 TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1654 
       55.40        27.88        28.64        64.64        36.23        47.70 
TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-1659 
       45.34        29.16         9.47        57.73        17.95         9.96 
TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1666 TCGA-09-1667 TCGA-09-1669 
       38.43        89.33        74.89        57.57        61.87        30.48 
TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 
       17.98         5.85         3.02         8.55        97.55         6.15 
TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 
        6.12        35.15         4.50       112.37        71.11        63.09 
TCGA-09-2053 TCGA-09-2054 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 
       39.75        20.91        12.46        54.31        25.91        81.47 
TCGA-10-0928 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 
       18.48        32.28        11.70         3.88        35.41        35.80 
TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 
       19.86         6.21        24.59        44.55        39.58         2.73 
TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 
       12.39        31.07        15.19        17.79        55.17         2.47 
TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 TCGA-13-0764 TCGA-13-0766 
       11.18        11.38        11.54        34.06        31.04        21.40 
TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0797 TCGA-13-0799 
       38.93        36.72        28.70        30.35         8.71         7.79 
TCGA-13-0800 TCGA-13-0801 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 
        8.12         8.28        43.82        35.28        35.28        13.61 
TCGA-13-0883 TCGA-13-0884 TCGA-13-0886 TCGA-13-0887 TCGA-13-0889 TCGA-13-0891 
       68.91       107.18        74.27        66.64        61.81        69.01 
TCGA-13-0893 TCGA-13-0897 TCGA-13-0900 TCGA-13-0903 TCGA-13-0905 TCGA-13-0906 
       43.36        57.47        57.07        47.38        47.84        44.94 
TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 
       44.84        37.08        27.68        34.06        29.98        21.14 
TCGA-13-0919 TCGA-13-0920 TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 
       14.89        13.81         4.64         6.41         6.08        10.88 
TCGA-13-1404 TCGA-13-1405 TCGA-13-1409 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 
        6.61         7.36         6.84         4.21         5.33        54.61 
TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 
       61.71        29.39        98.04        20.68        22.39        70.82 
TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 TCGA-13-1498 
       52.44        73.55        38.17        49.22         4.24        37.61 
TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1505 TCGA-13-1506 TCGA-13-1509 
       38.37        13.97        32.84         4.21         4.41         4.14 
TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 
        3.88         3.09        14.24        10.78         8.75         6.28 
TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 
       25.94        26.20        72.20        25.38        19.07        16.67 
TCGA-20-1687 TCGA-23-1021 TCGA-23-1023 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 
        2.66        47.54        40.54        26.83        31.73        49.41 
TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 TCGA-23-1111 
        8.81        29.10        18.87         2.24        51.35         3.22 
TCGA-23-1113 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 TCGA-23-1120 
       31.20         4.57        33.30        86.01       129.96         4.27 
TCGA-23-1122 TCGA-23-2072 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 
       39.09        24.95        87.48        91.66        77.00        49.84 
TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0970 TCGA-24-0975 
        2.76         4.70         4.50         7.63        11.64        21.80 
TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 
       41.56         7.66        22.32        54.08        63.55        47.41 
TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 
        6.31         6.38         7.82         7.99         7.86         0.76 
TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1431 
        6.25         6.02         5.95         5.36         4.80        19.17 
TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 TCGA-24-1464 TCGA-24-1467 TCGA-24-1469 
       43.53         8.55        72.92        12.46       105.99         9.11 
TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 
        3.42         1.18        22.19        26.96        57.37        64.27 
TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 
       16.21        56.58        41.06        51.91        41.39        58.09 
TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 
       88.50        70.62        39.88        44.09        45.50        47.70 
TCGA-24-1564 TCGA-24-1565 TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 TCGA-24-1842 
       25.87        10.26        90.15        88.34        48.33         8.32 
TCGA-24-1843 TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 TCGA-24-1920 TCGA-24-1923 
        3.48         4.37        11.28         5.75         9.80        22.65 
TCGA-24-1927 TCGA-24-1928 TCGA-24-1930 TCGA-24-2019 TCGA-24-2023 TCGA-24-2024 
       16.41        11.05        81.11         4.87        44.84        58.16 
TCGA-24-2027 TCGA-24-2029 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 
      109.68        14.43        18.48        28.18        64.01        44.48 
TCGA-24-2254 TCGA-24-2260 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 
       57.07        36.16         0.36        47.54        31.63        70.45 
TCGA-24-2281 TCGA-24-2288 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 
       44.58         0.82        36.23        16.64        33.11        55.86 
TCGA-24-2298 TCGA-25-1312 TCGA-25-1313 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 
       53.26         1.02        26.93        51.06        37.02         1.02 
TCGA-25-1320 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 TCGA-25-1625 TCGA-25-1626 
       36.95         2.99        12.00         2.96        18.02        15.78 
TCGA-25-1627 TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 
        0.36         7.86         0.30        56.94        60.59        35.54 
TCGA-25-1870 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 
       14.93        18.05        85.05        13.02        49.05         1.02 
TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2401 
       38.04         3.02        12.00        45.01        19.99         2.96 
TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 
       29.00        30.97        26.96        78.87        44.71        47.18 
TCGA-29-1693 TCGA-29-1694 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 
      101.75        38.53        33.70        31.17        68.28         0.53 
TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 
       16.90        18.64        59.67        18.25        41.95        29.23 
TCGA-29-1761 TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 
       17.00        85.68        66.77        62.93        39.09        31.23 
TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 TCGA-29-1776 
       22.98        24.36        22.52        17.29        12.36        11.84 
TCGA-29-1777 TCGA-29-1781 TCGA-29-1783 TCGA-29-1785 TCGA-29-2414 TCGA-29-2427 
       12.30         8.35         7.20        34.62        86.17        62.47 
TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 
       45.11         4.87        42.25        11.47         9.76        38.07 
TCGA-30-1718 TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 
       51.91        36.26         2.47        15.68         0.26        48.07 
TCGA-30-1860 TCGA-30-1861 TCGA-30-1862 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 
       44.91        34.78         6.08         1.18        57.57        24.26 
TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 
       30.05        48.79        45.57        30.18        18.77        22.45 
TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 
        6.71        42.51        44.09        28.73        29.06        21.53 
TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 
       22.85        22.55         8.55        30.05        25.74        27.85 
TCGA-36-1580 TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2538 
       24.23        35.05        33.01        29.49        29.79        25.08 
TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2548 
       23.80        21.60         2.24        20.98        18.31        14.17 
TCGA-36-2549 TCGA-36-2551 TCGA-36-2552 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 
        6.05        16.14        11.47        26.04        23.74         9.44 
TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1584 TCGA-57-1585 
        7.46        22.39         1.48        24.03        21.14         1.74 
TCGA-57-1993 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2354 
       25.05       180.16        80.12        22.32       116.12        34.39 
TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 
        5.39        44.78        11.11        20.94        31.40        18.54 
TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 
       28.47        48.79        44.84        35.80         2.43        33.67 
TCGA-61-1743 TCGA-61-1895 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 
       43.69         1.41         5.79        11.41        13.02         9.07 
TCGA-61-1906 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 
       34.13        37.02        42.48        48.92        56.58        67.73 
TCGA-61-1918 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 
       15.75        38.17         1.97         5.52        14.50        17.98 
TCGA-61-2003 TCGA-61-2009 TCGA-61-2016 TCGA-61-2017 TCGA-61-2087 TCGA-61-2088 
        3.98        39.85         1.18        45.96         4.80         4.77 
TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 
       51.72        71.74        61.64        60.62        65.49        55.50 
TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 TCGA-61-2113 TCGA-61-2612 
        6.48        76.83        20.68        44.52        22.22         6.35 
TCGA-61-2613 
       31.07 

  18P GAIN MUTATED 18P GAIN WILD-TYPE 
              0.53               0.26 
  18P GAIN MUTATED 18P GAIN WILD-TYPE 
            151.99             180.16 
  18P GAIN MUTATED 18P GAIN WILD-TYPE 
             29.01              27.85 
[1] "0.5 - 152.0 (29.0)" "0.3 - 180.2 (27.9)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "18P GAIN MUTATED"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED"   "18P GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "18P GAIN MUTATED"   "18P GAIN MUTATED"   "18P GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "18P GAIN MUTATED"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "18P GAIN MUTATED"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "18P GAIN MUTATED"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "18P GAIN MUTATED"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "18P GAIN MUTATED"   "18P GAIN MUTATED"   "18P GAIN MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-2614 
  "18P GAIN MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "18P GAIN MUTATED"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED"   "18P GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "18P GAIN MUTATED"   "18P GAIN MUTATED"   "18P GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "18P GAIN MUTATED"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "18P GAIN MUTATED"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "18P GAIN MUTATED"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "18P GAIN MUTATED"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "18P GAIN MUTATED"   "18P GAIN MUTATED"   "18P GAIN MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-2614 
  "18P GAIN MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "18P GAIN MUTATED"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED"   "18P GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "18P GAIN MUTATED"   "18P GAIN MUTATED"   "18P GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "18P GAIN MUTATED"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "18P GAIN MUTATED"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "18P GAIN MUTATED"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "18P GAIN MUTATED"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "18P GAIN MUTATED"   "18P GAIN MUTATED"   "18P GAIN MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"18P GAIN WILD-TYPE"   "18P GAIN MUTATED" "18P GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
  "18P GAIN MUTATED" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE"   "18P GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" "18P GAIN WILD-TYPE" 
        TCGA-61-2614 
  "18P GAIN MUTATED" 
[1] "hr=" "1.3"
D32V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  18P GAIN MUTATED         0   109                0
  18P GAIN WILD-TYPE       2   439                2
D32V3, multiclass
                  clus
vv                 18P GAIN MUTATED 18P GAIN WILD-TYPE
  OMENTUM                         0                  2
  OVARY                         109                439
  PERITONEUM OVARY                0                  2
D32V4, continuous
D32V5, binary
                    cls
clus                   0   1
  18P GAIN MUTATED     1 110
  18P GAIN WILD-TYPE   2 449
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  18P GAIN MUTATED      1  110
  18P GAIN WILD-TYPE    2  449
     clus
vv    18P GAIN MUTATED 18P GAIN WILD-TYPE
  NO                 1                  2
  YES              110                449
                    vv
clus                 R0 R1 R2
  18P GAIN MUTATED    3  5  0
  18P GAIN WILD-TYPE 11 21  2
D32V6, multiclass
    clus
vv   18P GAIN MUTATED 18P GAIN WILD-TYPE
  R0                3                 11
  R1                5                 21
  R2                0                  2

Clustering(33) Variable = 18Q GAIN MUTATION ANALYSIS
D33V1, survival
                    sevent
clus2                  0   1
  18Q GAIN MUTATED    35  28
  18Q GAIN WILD-TYPE 226 258
  18Q GAIN MUTATED 18Q GAIN WILD-TYPE 
                63                484 
  18Q GAIN MUTATED 18Q GAIN WILD-TYPE 
                28                258 
$`18Q GAIN MUTATED`
TCGA-04-1346 TCGA-04-1349 TCGA-04-1516 TCGA-04-1536 TCGA-04-1644 TCGA-04-1652 
       65.49        21.57        41.59        29.06        48.89        31.86 
TCGA-09-0369 TCGA-09-1661 TCGA-09-1665 TCGA-09-1668 TCGA-09-2055 TCGA-13-0717 
       35.54        38.43        41.59        55.36        26.93        24.59 
TCGA-13-0762 TCGA-13-0795 TCGA-13-0802 TCGA-13-0890 TCGA-13-0901 TCGA-13-0904 
       32.25        19.56         8.19        67.99        19.36        48.33 
TCGA-13-1410 TCGA-13-1489 TCGA-13-1497 TCGA-13-1504 TCGA-13-1507 TCGA-13-1510 
        4.70        82.88        54.31        16.57         4.77         2.56 
TCGA-13-2060 TCGA-23-1024 TCGA-23-1114 TCGA-23-1123 TCGA-23-1809 TCGA-23-2077 
        8.58        15.39        68.68        33.47         0.53       115.89 
TCGA-24-0968 TCGA-24-1430 TCGA-24-1434 TCGA-24-1466 TCGA-24-1604 TCGA-24-1845 
       19.63        28.34        18.67        45.14        88.34         3.81 
TCGA-24-1924 TCGA-24-2026 TCGA-25-1314 TCGA-25-1318 TCGA-25-1319 TCGA-25-1635 
       30.21        34.82        31.99        34.98        65.00        51.22 
TCGA-25-1871 TCGA-29-1695 TCGA-29-1705 TCGA-29-1778 TCGA-29-1784 TCGA-29-2432 
       24.99         0.79        18.25        14.93         5.36        11.84 
TCGA-36-1581 TCGA-36-2537 TCGA-61-1722 TCGA-61-1728 TCGA-61-1733 TCGA-61-1899 
       24.69        25.91         8.05        27.88        31.76         8.42 
TCGA-61-1907 TCGA-61-1917 TCGA-61-1998 TCGA-61-2008 TCGA-61-2012 TCGA-61-2096 
       31.30        43.43         5.52        30.61        30.64        58.39 
TCGA-61-2101 TCGA-61-2111 TCGA-61-2614 
       55.50       125.72         8.58 

$`18Q GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1343 TCGA-04-1347 TCGA-04-1348 TCGA-04-1350 TCGA-04-1351 
       18.51        11.87        63.06        48.76        63.98        65.46 
TCGA-04-1356 TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 
       49.28        32.52        44.32        33.67        76.54        71.47 
TCGA-04-1371 TCGA-04-1514 TCGA-04-1517 TCGA-04-1525 TCGA-04-1530 TCGA-04-1542 
       82.36        56.55        19.99        38.37       119.08        84.20 
TCGA-04-1638 TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1654 
       55.40        27.88        28.64        64.64        36.23        47.70 
TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-1659 
       45.34        29.16         9.47        57.73        17.95         9.96 
TCGA-09-1662 TCGA-09-1664 TCGA-09-1666 TCGA-09-1667 TCGA-09-1669 TCGA-09-1670 
       89.33        74.89        57.57        61.87        30.48        17.98 
TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 
        5.85         3.02         8.55        97.55         6.15         6.12 
TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 
       35.15         4.50       112.37        71.11        63.09        39.75 
TCGA-09-2054 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 
       20.91        12.46        54.31        25.91        81.47        18.48 
TCGA-10-0930 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 
       33.24        32.28        11.70         3.88        35.41        35.80 
TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 
       15.12        19.86         6.21        44.55        39.58         2.73 
TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 
       12.39        31.07        15.19        17.79        55.17         2.47 
TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 TCGA-13-0764 TCGA-13-0766 
       11.18        11.38        11.54        34.06        31.04        21.40 
TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0797 
        8.42        38.93        36.72        28.70        30.35         8.71 
TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 
        7.79         8.12         8.28        43.82        35.28        35.28 
TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 
       13.61        68.91       107.18        91.40        74.27        66.64 
TCGA-13-0888 TCGA-13-0889 TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 TCGA-13-0899 
       70.39        61.81        69.01        43.36        57.47        56.15 
TCGA-13-0900 TCGA-13-0903 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 
       57.07        47.38        47.84        44.94        44.84        37.08 
TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 
       27.68        34.06        29.98        21.14        14.89        13.81 
TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 
        4.64         6.41         6.08        10.88         6.61         7.36 
TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 
        6.05         5.92         6.84         4.21         5.33        54.61 
TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 
       87.06        61.71        29.39        98.04        20.68        22.39 
TCGA-13-1488 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 
       70.82        52.44        73.55        38.17        49.22         4.24 
TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1505 TCGA-13-1506 
       37.61        38.37        13.97        32.84         4.21         4.41 
TCGA-13-1509 TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 TCGA-13-2059 TCGA-13-2061 
        4.14         3.88         3.09        14.24        12.23        10.78 
TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 
        8.75         6.28        23.05        25.94        26.20        72.20 
TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 
       27.48        25.38        19.07        16.67         2.93         2.66 
TCGA-23-1021 TCGA-23-1022 TCGA-23-1023 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 
       47.54        42.51        40.54        26.83        31.73        49.41 
TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 
        8.81        29.10        18.87         2.24        51.35        54.51 
TCGA-23-1111 TCGA-23-1113 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 
        3.22        31.20         4.57        33.30        86.01       129.96 
TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1124 TCGA-23-2072 TCGA-23-2078 
        4.27         6.38        39.09        58.13        24.95        87.48 
TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 
       91.66        77.00        49.84         2.76         4.70         4.50 
TCGA-24-0966 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 
        7.63        11.64        21.80        41.56         7.66        22.32 
TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 
       54.08        63.55        47.41         6.31         6.38         7.82 
TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 
        7.99         7.86         0.76         6.25         6.02         5.95 
TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1431 TCGA-24-1435 TCGA-24-1436 
        5.36         4.80        17.36        19.17        43.53         8.55 
TCGA-24-1463 TCGA-24-1464 TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 
       72.92        12.46       105.99         9.11         3.42         1.18 
TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 
       22.19        26.96        57.37        64.27        16.21        56.58 
TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 
       41.06        51.91        41.39        58.09        88.50        70.62 
TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 
       39.88        19.53        44.09        45.50        47.70        25.87 
TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 
       10.26        17.23        90.15        48.33        38.24         8.32 
TCGA-24-1843 TCGA-24-1844 TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 
        3.48         3.72         4.37        11.28         5.75         5.49 
TCGA-24-1920 TCGA-24-1923 TCGA-24-1927 TCGA-24-1928 TCGA-24-1930 TCGA-24-2019 
        9.80        22.65        16.41        11.05        81.11         4.87 
TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 
      151.99        44.84        58.16       109.68        14.43        53.95 
TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 
       18.48        28.18        64.01        44.48        57.07        36.16 
TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 
        0.79         0.36        47.54        31.63        70.45        44.58 
TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 
        0.82        67.36        36.23        16.64        33.11        55.86 
TCGA-24-2298 TCGA-25-1312 TCGA-25-1313 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 
       53.26         1.02        26.93        51.06        37.02         1.02 
TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 
       36.95        33.96         2.99        12.00         2.96        18.58 
TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 TCGA-25-1630 TCGA-25-1631 
       18.02        15.78         0.36        20.58         7.86         0.30 
TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 TCGA-25-1870 TCGA-25-1877 TCGA-25-1878 
       56.94        60.59        35.54        14.93        18.05        85.05 
TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 
       13.02        49.05         1.02        38.04         3.02        12.00 
TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 
       45.01        19.99        42.02         2.96        29.00        30.97 
TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 TCGA-29-1693 TCGA-29-1694 
       26.96        78.87        44.71        47.18       101.75        38.53 
TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 TCGA-29-1702 
       33.70        31.17        68.28         0.53        16.90        18.64 
TCGA-29-1703 TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 
       59.67        41.95        29.23        34.62        17.00        85.68 
TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 
       66.77        62.93        39.09        31.23        22.98        24.36 
TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 TCGA-29-1776 TCGA-29-1777 TCGA-29-1781 
       22.52        17.29        12.36        11.84        12.30         8.35 
TCGA-29-1783 TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 
        7.20        34.62        86.17        65.00        62.47        45.11 
TCGA-29-2429 TCGA-29-2431 TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 
        4.87        42.25        11.47         9.76        38.07        51.91 
TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 
       36.26         2.47        15.68         0.26        48.07        44.91 
TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 
       34.78         6.08        36.62         1.18        57.57        24.26 
TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 
       30.05        48.79        45.57        30.18        18.77        22.45 
TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1569 
        6.71        42.51        44.09         2.17        28.73        29.06 
TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 
       21.53        22.85        22.55         8.55        30.05        25.74 
TCGA-36-1578 TCGA-36-1580 TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 
       27.85        24.23        35.05        33.01        29.49        29.79 
TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 
       25.08        23.80        21.60         2.24        20.98        18.31 
TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 TCGA-36-2552 TCGA-42-2582 
       20.52        14.17         6.05        16.14        11.47        26.04 
TCGA-42-2587 TCGA-42-2588 TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 
       23.74         9.44         7.56         7.46        22.39         1.48 
TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 
       24.03        11.38        21.14         1.74        22.32        28.96 
TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 
       25.05        25.02       180.16        80.12        22.32       116.12 
TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 
        9.40        34.39         2.14         5.39        44.78        11.11 
TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1730 TCGA-61-1734 TCGA-61-1736 
       20.94        31.40        18.54         4.34        28.47        48.79 
TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 
       44.84        35.80         2.43        33.67        43.69         1.41 
TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 TCGA-61-1910 
        5.79        11.41        13.02         9.07        34.13        37.02 
TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 TCGA-61-1918 TCGA-61-1919 
       42.48        48.92        56.58        67.73        15.75        38.17 
TCGA-61-1995 TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 TCGA-61-2009 TCGA-61-2016 
        1.97        14.50        17.98         3.98        39.85         1.18 
TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 
       45.96        45.40         4.80         4.77        51.72        71.74 
TCGA-61-2095 TCGA-61-2097 TCGA-61-2098 TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 
       61.64        60.62        65.49         6.48        76.83        20.68 
TCGA-61-2110 TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 
       44.52        22.22         6.35        31.07 

  18Q GAIN MUTATED 18Q GAIN WILD-TYPE 
              0.53               0.26 
  18Q GAIN MUTATED 18Q GAIN WILD-TYPE 
            125.72             180.16 
  18Q GAIN MUTATED 18Q GAIN WILD-TYPE 
            30.210             27.765 
[1] "0.5 - 125.7 (30.2)" "0.3 - 180.2 (27.8)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "18Q GAIN MUTATED"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-2614 
  "18Q GAIN MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "18Q GAIN MUTATED"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-2614 
  "18Q GAIN MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "18Q GAIN MUTATED"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "18Q GAIN MUTATED" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE"   "18Q GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" "18Q GAIN WILD-TYPE" 
        TCGA-61-2614 
  "18Q GAIN MUTATED" 
[1] "hr=" "1.2"
D33V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  18Q GAIN MUTATED         0    64                0
  18Q GAIN WILD-TYPE       2   484                2
D33V3, multiclass
                  clus
vv                 18Q GAIN MUTATED 18Q GAIN WILD-TYPE
  OMENTUM                         0                  2
  OVARY                          64                484
  PERITONEUM OVARY                0                  2
D33V4, continuous
D33V5, binary
                    cls
clus                   0   1
  18Q GAIN MUTATED     1  64
  18Q GAIN WILD-TYPE   2 495
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  18Q GAIN MUTATED      1   64
  18Q GAIN WILD-TYPE    2  495
     clus
vv    18Q GAIN MUTATED 18Q GAIN WILD-TYPE
  NO                 1                  2
  YES               64                495
                    vv
clus                 R0 R1 R2
  18Q GAIN MUTATED    1  4  0
  18Q GAIN WILD-TYPE 13 22  2
D33V6, multiclass
    clus
vv   18Q GAIN MUTATED 18Q GAIN WILD-TYPE
  R0                1                 13
  R1                4                 22
  R2                0                  2

Clustering(34) Variable = 19P GAIN MUTATION ANALYSIS
D34V1, survival
                    sevent
clus2                  0   1
  19P GAIN MUTATED    81  73
  19P GAIN WILD-TYPE 180 213
  19P GAIN MUTATED 19P GAIN WILD-TYPE 
               154                393 
  19P GAIN MUTATED 19P GAIN WILD-TYPE 
                73                213 
$`19P GAIN MUTATED`
TCGA-04-1335 TCGA-04-1338 TCGA-04-1342 TCGA-04-1346 TCGA-04-1514 TCGA-04-1525 
        1.81        46.62        18.51        65.49        56.55        38.37 
TCGA-04-1542 TCGA-04-1648 TCGA-04-1649 TCGA-04-1652 TCGA-09-0367 TCGA-09-1665 
       84.20        28.64        64.64        31.86        17.95        41.59 
TCGA-09-1667 TCGA-09-1669 TCGA-09-1670 TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 
       61.87        30.48        17.98         8.55        97.55         6.15 
TCGA-09-2054 TCGA-10-0926 TCGA-10-0933 TCGA-10-0938 TCGA-13-0727 TCGA-13-0758 
       20.91        25.91        11.70        19.86        15.19        11.38 
TCGA-13-0760 TCGA-13-0761 TCGA-13-0764 TCGA-13-0791 TCGA-13-0802 TCGA-13-0807 
       11.54        34.06        31.04        38.93         8.19        13.61 
TCGA-13-0883 TCGA-13-0884 TCGA-13-0887 TCGA-13-0888 TCGA-13-0905 TCGA-13-0920 
       68.91       107.18        66.64        70.39        47.84        13.81 
TCGA-13-1407 TCGA-13-1408 TCGA-13-1410 TCGA-13-1481 TCGA-13-1482 TCGA-13-1484 
        6.05         5.92         4.70        87.06        61.71        98.04 
TCGA-13-1491 TCGA-13-1495 TCGA-13-1506 TCGA-13-1510 TCGA-13-2057 TCGA-20-0987 
       52.44        49.22         4.41         2.56        14.24        23.05 
TCGA-20-0990 TCGA-20-0991 TCGA-20-1682 TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 
       25.94        26.20        27.48         2.93         2.66        47.54 
TCGA-23-1022 TCGA-23-1024 TCGA-23-1026 TCGA-23-1109 TCGA-23-1111 TCGA-23-1116 
       42.51        15.39        26.83        51.35         3.22         4.57 
TCGA-23-1117 TCGA-23-1121 TCGA-23-1809 TCGA-24-1105 TCGA-24-1417 TCGA-24-1426 
       33.30         6.38         0.53        47.41         7.82         5.36 
TCGA-24-1428 TCGA-24-1436 TCGA-24-1469 TCGA-24-1471 TCGA-24-1545 TCGA-24-1548 
       17.36         8.55         9.11         1.18        57.37        16.21 
TCGA-24-1551 TCGA-24-1557 TCGA-24-1558 TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 
       51.91        39.88        19.53        48.33        38.24         8.32 
TCGA-24-1843 TCGA-24-1844 TCGA-24-1845 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 
        3.48         3.72         3.81         5.49         9.80        22.65 
TCGA-24-1928 TCGA-24-2020 TCGA-24-2030 TCGA-24-2033 TCGA-24-2261 TCGA-24-2267 
       11.05       151.99        53.95        18.48         0.79        47.54 
TCGA-24-2280 TCGA-24-2295 TCGA-25-1314 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 
       70.45        33.11        31.99        34.98        65.00        36.95 
TCGA-25-1321 TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 TCGA-25-2398 TCGA-29-1695 
       33.96        12.00         2.96        18.58        45.01         0.79 
TCGA-29-1698 TCGA-29-1702 TCGA-29-1711 TCGA-29-1770 TCGA-29-1775 TCGA-29-1783 
       68.28        18.64        34.62        24.36        12.36         7.20 
TCGA-29-1785 TCGA-29-2432 TCGA-29-2434 TCGA-30-1714 TCGA-30-1855 TCGA-30-1857 
       34.62        11.84        11.47        38.07         2.47         0.26 
TCGA-30-1860 TCGA-30-1862 TCGA-30-1867 TCGA-30-1892 TCGA-31-1944 TCGA-31-1950 
       44.91         6.08         1.18        48.79        45.57        18.77 
TCGA-36-1578 TCGA-36-2529 TCGA-36-2534 TCGA-36-2543 TCGA-36-2544 TCGA-36-2547 
       27.85        35.05        29.79         2.24        20.98        20.52 
TCGA-36-2552 TCGA-42-2582 TCGA-42-2589 TCGA-57-1582 TCGA-57-1583 TCGA-57-1586 
       11.47        26.04         7.56        24.03        11.38        22.32 
TCGA-59-2348 TCGA-59-2351 TCGA-59-2355 TCGA-61-1725 TCGA-61-1728 TCGA-61-1730 
      180.16       116.12         2.14        31.40        27.88         4.34 
TCGA-61-1899 TCGA-61-1904 TCGA-61-1906 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 
        8.42         9.07        34.13        42.48        48.92        56.58 
TCGA-61-1918 TCGA-61-2000 TCGA-61-2003 TCGA-61-2009 TCGA-61-2096 TCGA-61-2097 
       15.75        14.50         3.98        39.85        58.39        60.62 
TCGA-61-2098 TCGA-61-2104 TCGA-61-2111 TCGA-61-2113 
       65.49        76.83       125.72        22.22 

$`19P GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1336 TCGA-04-1337 TCGA-04-1343 TCGA-04-1347 
       40.24        41.00        49.15         2.01        11.87        63.06 
TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 
       48.76        21.57        63.98        65.46        49.28        32.52 
TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1516 
       44.32        33.67        76.54        71.47        82.36        41.59 
TCGA-04-1517 TCGA-04-1530 TCGA-04-1536 TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 
       19.99       119.08        29.06        55.40        48.89        27.88 
TCGA-04-1651 TCGA-04-1654 TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 
       36.23        47.70        45.34        29.16         9.47        57.73 
TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1666 
       35.54         9.96        38.43        89.33        74.89        57.57 
TCGA-09-1668 TCGA-09-1672 TCGA-09-1673 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 
       55.36         5.85         3.02         6.12        35.15         4.50 
TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 TCGA-09-2055 TCGA-09-2056 
      112.37        71.11        63.09        39.75        26.93        12.46 
TCGA-10-0925 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 TCGA-10-0934 
       54.31        81.47        18.48        33.24        32.28         3.88 
TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 
       35.41        35.80        15.12         6.21        24.59        44.55 
TCGA-13-0723 TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 TCGA-13-0730 TCGA-13-0751 
       39.58         2.73        12.39        31.07        17.79        55.17 
TCGA-13-0755 TCGA-13-0757 TCGA-13-0762 TCGA-13-0766 TCGA-13-0768 TCGA-13-0792 
        2.47        11.18        32.25        21.40         8.42        36.72 
TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 
       28.70        30.35        19.56         8.71         7.79         8.12 
TCGA-13-0801 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0885 TCGA-13-0886 
        8.28        43.82        35.28        35.28        91.40        74.27 
TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 TCGA-13-0899 
       61.81        67.99        69.01        43.36        57.47        56.15 
TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0906 TCGA-13-0908 
       57.07        19.36        47.38        48.33        44.94        44.84 
TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 
       37.08        27.68        34.06        29.98        21.14        14.89 
TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 
        4.64         6.41         6.08        10.88         6.61         7.36 
TCGA-13-1409 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 TCGA-13-1483 TCGA-13-1485 
        6.84         4.21         5.33        54.61        29.39        20.68 
TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 TCGA-13-1492 TCGA-13-1494 TCGA-13-1496 
       22.39        70.82        82.88        73.55        38.17         4.24 
TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 
       54.31        37.61        38.37        13.97        32.84        16.57 
TCGA-13-1505 TCGA-13-1507 TCGA-13-1509 TCGA-13-1511 TCGA-13-1512 TCGA-13-2059 
        4.21         4.77         4.14         3.88         3.09        12.23 
TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0996 TCGA-20-1683 
        8.58        10.78         8.75         6.28        72.20        25.38 
TCGA-20-1684 TCGA-20-1685 TCGA-23-1023 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 
       19.07        16.67        40.54        31.73        49.41         8.81 
TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1110 TCGA-23-1113 TCGA-23-1114 
       29.10        18.87         2.24        54.51        31.20        68.68 
TCGA-23-1118 TCGA-23-1119 TCGA-23-1120 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 
       86.01       129.96         4.27        39.09        33.47        58.13 
TCGA-23-2072 TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 
       24.95       115.89        87.48        91.66        77.00        49.84 
TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 
        2.76         4.70         4.50         7.63        19.63        11.64 
TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 
       21.80        41.56         7.66        22.32        54.08        63.55 
TCGA-24-1413 TCGA-24-1416 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 
        6.31         6.38         7.99         7.86         0.76         6.25 
TCGA-24-1424 TCGA-24-1425 TCGA-24-1427 TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 
        6.02         5.95         4.80        28.34        19.17        18.67 
TCGA-24-1435 TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 TCGA-24-1470 
       43.53        72.92        12.46        45.14       105.99         3.42 
TCGA-24-1474 TCGA-24-1544 TCGA-24-1546 TCGA-24-1549 TCGA-24-1550 TCGA-24-1552 
       22.19        26.96        64.27        56.58        41.06        41.39 
TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 
       58.09        88.50        70.62        44.09        45.50        47.70 
TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 TCGA-24-1846 
       25.87        10.26        17.23        90.15        88.34         4.37 
TCGA-24-1847 TCGA-24-1849 TCGA-24-1924 TCGA-24-1927 TCGA-24-1930 TCGA-24-2019 
       11.28         5.75        30.21        16.41        81.11         4.87 
TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2035 
       44.84        58.16        34.82       109.68        14.43        28.18 
TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 TCGA-24-2262 TCGA-24-2271 
       64.01        44.48        57.07        36.16         0.36        31.63 
TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2297 
       44.58         0.82        67.36        36.23        16.64        55.86 
TCGA-24-2298 TCGA-25-1312 TCGA-25-1313 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 
       53.26         1.02        26.93        51.06        37.02         1.02 
TCGA-25-1322 TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 TCGA-25-1630 
        2.99        18.02        15.78         0.36        20.58         7.86 
TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 
        0.30        56.94        60.59        35.54        51.22        14.93 
TCGA-25-1871 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 
       24.99        18.05        85.05        13.02        49.05         1.02 
TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 
       38.04         3.02        12.00        19.99        42.02         2.96 
TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 
       29.00        30.97        26.96        78.87        44.71        47.18 
TCGA-29-1693 TCGA-29-1694 TCGA-29-1696 TCGA-29-1697 TCGA-29-1699 TCGA-29-1701 
      101.75        38.53        33.70        31.17         0.53        16.90 
TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1761 TCGA-29-1762 
       59.67        18.25        41.95        29.23        17.00        85.68 
TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 TCGA-29-1771 
       66.77        62.93        39.09        31.23        22.98        22.52 
TCGA-29-1774 TCGA-29-1776 TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 TCGA-29-1784 
       17.29        11.84        12.30        14.93         8.35         5.36 
TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 
       86.17        65.00        62.47        45.11         4.87        42.25 
TCGA-29-2436 TCGA-30-1718 TCGA-30-1853 TCGA-30-1856 TCGA-30-1859 TCGA-30-1861 
        9.76        51.91        36.26        15.68        48.07        34.78 
TCGA-30-1866 TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-31-1946 TCGA-31-1951 
       36.62        57.57        24.26        30.05        30.18        22.45 
TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1569 
        6.71        42.51        44.09         2.17        28.73        29.06 
TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 
       21.53        22.85        22.55         8.55        30.05        25.74 
TCGA-36-1580 TCGA-36-1581 TCGA-36-2530 TCGA-36-2532 TCGA-36-2537 TCGA-36-2538 
       24.23        24.69        33.01        29.49        25.91        25.08 
TCGA-36-2540 TCGA-36-2542 TCGA-36-2545 TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 
       23.80        21.60        18.31        14.17         6.05        16.14 
TCGA-42-2587 TCGA-42-2588 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1584 
       23.74         9.44         7.46        22.39         1.48        21.14 
TCGA-57-1585 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 TCGA-59-2349 TCGA-59-2350 
        1.74        28.96        25.05        25.02        80.12        22.32 
TCGA-59-2352 TCGA-59-2354 TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 
        9.40        34.39         5.39        44.78        11.11         8.05 
TCGA-61-1724 TCGA-61-1727 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 
       20.94        18.54        31.76        28.47        48.79        44.84 
TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 TCGA-61-1900 
       35.80         2.43        33.67        43.69         1.41         5.79 
TCGA-61-1901 TCGA-61-1903 TCGA-61-1907 TCGA-61-1910 TCGA-61-1915 TCGA-61-1917 
       11.41        13.02        31.30        37.02        67.73        43.43 
TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 TCGA-61-2002 TCGA-61-2008 TCGA-61-2012 
       38.17         1.97         5.52        17.98        30.61        30.64 
TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 
        1.18        45.96        45.40         4.80         4.77        51.72 
TCGA-61-2094 TCGA-61-2095 TCGA-61-2101 TCGA-61-2102 TCGA-61-2109 TCGA-61-2110 
       71.74        61.64        55.50         6.48        20.68        44.52 
TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
        6.35        31.07         8.58 

  19P GAIN MUTATED 19P GAIN WILD-TYPE 
              0.26               0.30 
  19P GAIN MUTATED 19P GAIN WILD-TYPE 
            180.16             129.96 
  19P GAIN MUTATED 19P GAIN WILD-TYPE 
            24.195             29.100 
[1] "0.3 - 180.2 (24.2)" "0.3 - 130.0 (29.1)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "19P GAIN MUTATED"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "19P GAIN MUTATED"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "19P GAIN MUTATED"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "19P GAIN MUTATED"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "19P GAIN MUTATED"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "19P GAIN MUTATED"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "19P GAIN MUTATED"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "19P GAIN MUTATED"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "19P GAIN MUTATED"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "19P GAIN MUTATED"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "19P GAIN MUTATED"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "19P GAIN MUTATED"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "19P GAIN MUTATED"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
  "19P GAIN MUTATED"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-2614 
"19P GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "19P GAIN MUTATED"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "19P GAIN MUTATED"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "19P GAIN MUTATED"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "19P GAIN MUTATED"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "19P GAIN MUTATED"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "19P GAIN MUTATED"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "19P GAIN MUTATED"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "19P GAIN MUTATED"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "19P GAIN MUTATED"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "19P GAIN MUTATED"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "19P GAIN MUTATED"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "19P GAIN MUTATED"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "19P GAIN MUTATED"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
  "19P GAIN MUTATED"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-2614 
"19P GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "19P GAIN MUTATED"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "19P GAIN MUTATED"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "19P GAIN MUTATED"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "19P GAIN MUTATED"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "19P GAIN MUTATED"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "19P GAIN MUTATED"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "19P GAIN MUTATED"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "19P GAIN MUTATED"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "19P GAIN MUTATED"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "19P GAIN MUTATED"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "19P GAIN MUTATED"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "19P GAIN MUTATED"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "19P GAIN MUTATED"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"19P GAIN WILD-TYPE"   "19P GAIN MUTATED" "19P GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
  "19P GAIN MUTATED"   "19P GAIN MUTATED"   "19P GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE"   "19P GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "19P GAIN MUTATED" "19P GAIN WILD-TYPE" "19P GAIN WILD-TYPE" 
        TCGA-61-2614 
"19P GAIN WILD-TYPE" 
[1] "hr=" "1.1"
D34V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  19P GAIN MUTATED         0   155                1
  19P GAIN WILD-TYPE       2   393                1
D34V3, multiclass
                  clus
vv                 19P GAIN MUTATED 19P GAIN WILD-TYPE
  OMENTUM                         0                  2
  OVARY                         155                393
  PERITONEUM OVARY                1                  1
D34V4, continuous
D34V5, binary
                    cls
clus                   0   1
  19P GAIN MUTATED     1 158
  19P GAIN WILD-TYPE   2 401
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  19P GAIN MUTATED      1  158
  19P GAIN WILD-TYPE    2  401
     clus
vv    19P GAIN MUTATED 19P GAIN WILD-TYPE
  NO                 1                  2
  YES              158                401
                    vv
clus                 R0 R1 R2
  19P GAIN MUTATED    5  7  0
  19P GAIN WILD-TYPE  9 19  2
D34V6, multiclass
    clus
vv   19P GAIN MUTATED 19P GAIN WILD-TYPE
  R0                5                  9
  R1                7                 19
  R2                0                  2

Clustering(35) Variable = 19Q GAIN MUTATION ANALYSIS
D35V1, survival
                    sevent
clus2                  0   1
  19Q GAIN MUTATED    72  76
  19Q GAIN WILD-TYPE 189 210
  19Q GAIN MUTATED 19Q GAIN WILD-TYPE 
               148                399 
  19Q GAIN MUTATED 19Q GAIN WILD-TYPE 
                76                210 
$`19Q GAIN MUTATED`
TCGA-04-1332 TCGA-04-1338 TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1516 
       41.00        46.62        18.51        11.87        65.49        41.59 
TCGA-04-1517 TCGA-04-1525 TCGA-04-1536 TCGA-04-1542 TCGA-04-1648 TCGA-04-1652 
       19.99        38.37        29.06        84.20        28.64        31.86 
TCGA-09-0364 TCGA-09-0365 TCGA-09-0367 TCGA-09-1669 TCGA-09-1670 TCGA-09-1674 
       29.16         9.47        17.95        30.48        17.98         8.55 
TCGA-09-2043 TCGA-10-0926 TCGA-10-0933 TCGA-13-0717 TCGA-13-0727 TCGA-13-0758 
        6.15        25.91        11.70        24.59        15.19        11.38 
TCGA-13-0760 TCGA-13-0761 TCGA-13-0791 TCGA-13-0794 TCGA-13-0802 TCGA-13-0883 
       11.54        34.06        38.93        30.35         8.19        68.91 
TCGA-13-0885 TCGA-13-0888 TCGA-13-0905 TCGA-13-0920 TCGA-13-1408 TCGA-13-1410 
       91.40        70.39        47.84        13.81         5.92         4.70 
TCGA-13-1481 TCGA-13-1482 TCGA-13-1484 TCGA-13-1491 TCGA-13-1492 TCGA-13-1495 
       87.06        61.71        98.04        52.44        73.55        49.22 
TCGA-13-1504 TCGA-13-1506 TCGA-13-1507 TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 
       16.57         4.41         4.77        23.05        25.94        26.20 
TCGA-20-1682 TCGA-20-1686 TCGA-20-1687 TCGA-23-1022 TCGA-23-1026 TCGA-23-1111 
       27.48         2.93         2.66        42.51        26.83         3.22 
TCGA-23-1116 TCGA-23-1117 TCGA-23-1121 TCGA-23-1809 TCGA-24-1105 TCGA-24-1417 
        4.57        33.30         6.38         0.53        47.41         7.82 
TCGA-24-1426 TCGA-24-1428 TCGA-24-1436 TCGA-24-1469 TCGA-24-1471 TCGA-24-1545 
        5.36        17.36         8.55         9.11         1.18        57.37 
TCGA-24-1548 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1557 TCGA-24-1558 
       16.21        41.06        51.91        41.39        39.88        19.53 
TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 TCGA-24-1845 
       48.33        38.24         8.32         3.48         3.72         3.81 
TCGA-24-1847 TCGA-24-1850 TCGA-24-1923 TCGA-24-2020 TCGA-24-2030 TCGA-24-2033 
       11.28         5.49        22.65       151.99        53.95        18.48 
TCGA-24-2261 TCGA-24-2267 TCGA-24-2280 TCGA-24-2288 TCGA-24-2295 TCGA-25-1312 
        0.79        47.54        70.45         0.82        33.11         1.02 
TCGA-25-1314 TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 
       31.99         1.02        34.98        65.00        36.95        33.96 
TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 TCGA-25-2398 TCGA-29-1691 TCGA-29-1695 
       12.00         2.96        18.58        45.01        47.18         0.79 
TCGA-29-1698 TCGA-29-1701 TCGA-29-1766 TCGA-29-1770 TCGA-29-1774 TCGA-29-1775 
       68.28        16.90        39.09        24.36        17.29        12.36 
TCGA-29-1785 TCGA-29-2432 TCGA-29-2434 TCGA-30-1714 TCGA-30-1718 TCGA-30-1855 
       34.62        11.84        11.47        38.07        51.91         2.47 
TCGA-30-1857 TCGA-30-1860 TCGA-30-1867 TCGA-30-1892 TCGA-31-1944 TCGA-31-1959 
        0.26        44.91         1.18        48.79        45.57         2.17 
TCGA-36-1578 TCGA-36-2529 TCGA-36-2534 TCGA-36-2543 TCGA-36-2544 TCGA-36-2552 
       27.85        35.05        29.79         2.24        20.98        11.47 
TCGA-42-2582 TCGA-42-2589 TCGA-57-1582 TCGA-57-1586 TCGA-59-2348 TCGA-59-2351 
       26.04         7.56        24.03        22.32       180.16       116.12 
TCGA-59-2355 TCGA-61-1722 TCGA-61-1728 TCGA-61-1730 TCGA-61-1741 TCGA-61-1904 
        2.14         8.05        27.88         4.34        33.67         9.07 
TCGA-61-1906 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1918 TCGA-61-2009 
       34.13        42.48        48.92        56.58        15.75        39.85 
TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 TCGA-61-2113 
       58.39        60.62        65.49        22.22 

$`19Q GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1347 TCGA-04-1348 
       40.24         1.81        49.15         2.01        63.06        48.76 
TCGA-04-1349 TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 TCGA-04-1362 
       21.57        63.98        65.46        49.28        32.52        44.32 
TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 TCGA-04-1530 
       33.67        76.54        71.47        82.36        56.55       119.08 
TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 TCGA-04-1649 TCGA-04-1651 TCGA-04-1654 
       55.40        48.89        27.88        64.64        36.23        47.70 
TCGA-04-1655 TCGA-09-0366 TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 
       45.34        57.73        35.54         9.96        38.43        89.33 
TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 TCGA-09-1672 
       74.89        41.59        57.57        61.87        55.36         5.85 
TCGA-09-1673 TCGA-09-1675 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 
        3.02        97.55         6.12        35.15         4.50       112.37 
TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 
       71.11        63.09        39.75        20.91        26.93        12.46 
TCGA-10-0925 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 TCGA-10-0934 
       54.31        81.47        18.48        33.24        32.28         3.88 
TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 TCGA-13-0720 
       35.41        35.80        15.12        19.86         6.21        44.55 
TCGA-13-0723 TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 TCGA-13-0730 TCGA-13-0751 
       39.58         2.73        12.39        31.07        17.79        55.17 
TCGA-13-0755 TCGA-13-0757 TCGA-13-0762 TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 
        2.47        11.18        32.25        31.04        21.40         8.42 
TCGA-13-0792 TCGA-13-0793 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 
       36.72        28.70        19.56         8.71         7.79         8.12 
TCGA-13-0801 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 TCGA-13-0884 
        8.28        43.82        35.28        35.28        13.61       107.18 
TCGA-13-0886 TCGA-13-0887 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 
       74.27        66.64        61.81        67.99        69.01        43.36 
TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 
       57.47        56.15        57.07        19.36        47.38        48.33 
TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 
       44.94        44.84        37.08        27.68        34.06        29.98 
TCGA-13-0916 TCGA-13-0919 TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 
       21.14        14.89         4.64         6.41         6.08        10.88 
TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 TCGA-13-1409 TCGA-13-1411 TCGA-13-1412 
        6.61         7.36         6.05         6.84         4.21         5.33 
TCGA-13-1477 TCGA-13-1483 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 
       54.61        29.39        20.68        22.39        70.82        82.88 
TCGA-13-1494 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 
       38.17         4.24        54.31        37.61        38.37        13.97 
TCGA-13-1501 TCGA-13-1505 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 
       32.84         4.21         4.14         2.56         3.88         3.09 
TCGA-13-2057 TCGA-13-2059 TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 
       14.24        12.23         8.58        10.78         8.75         6.28 
TCGA-20-0996 TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-23-1021 TCGA-23-1023 
       72.20        25.38        19.07        16.67        47.54        40.54 
TCGA-23-1024 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 
       15.39        31.73        49.41         8.81        29.10        18.87 
TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 TCGA-23-1113 TCGA-23-1114 TCGA-23-1118 
        2.24        51.35        54.51        31.20        68.68        86.01 
TCGA-23-1119 TCGA-23-1120 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-2072 
      129.96         4.27        39.09        33.47        58.13        24.95 
TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 
      115.89        87.48        91.66        77.00        49.84         2.76 
TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 
        4.70         4.50         7.63        19.63        11.64        21.80 
TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 TCGA-24-1413 
       41.56         7.66        22.32        54.08        63.55         6.31 
TCGA-24-1416 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 
        6.38         7.99         7.86         0.76         6.25         6.02 
TCGA-24-1425 TCGA-24-1427 TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 
        5.95         4.80        28.34        19.17        18.67        43.53 
TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 TCGA-24-1470 TCGA-24-1474 
       72.92        12.46        45.14       105.99         3.42        22.19 
TCGA-24-1544 TCGA-24-1546 TCGA-24-1549 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 
       26.96        64.27        56.58        58.09        88.50        70.62 
TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 
       44.09        45.50        47.70        25.87        10.26        17.23 
TCGA-24-1603 TCGA-24-1604 TCGA-24-1846 TCGA-24-1849 TCGA-24-1920 TCGA-24-1924 
       90.15        88.34         4.37         5.75         9.80        30.21 
TCGA-24-1927 TCGA-24-1928 TCGA-24-1930 TCGA-24-2019 TCGA-24-2023 TCGA-24-2024 
       16.41        11.05        81.11         4.87        44.84        58.16 
TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 
       34.82       109.68        14.43        28.18        64.01        44.48 
TCGA-24-2254 TCGA-24-2260 TCGA-24-2262 TCGA-24-2271 TCGA-24-2281 TCGA-24-2289 
       57.07        36.16         0.36        31.63        44.58        67.36 
TCGA-24-2290 TCGA-24-2293 TCGA-24-2297 TCGA-24-2298 TCGA-25-1313 TCGA-25-1315 
       36.23        16.64        55.86        53.26        26.93        51.06 
TCGA-25-1316 TCGA-25-1322 TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 
       37.02         2.99        18.02        15.78         0.36        20.58 
TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 TCGA-25-1635 
        7.86         0.30        56.94        60.59        35.54        51.22 
TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 
       14.93        24.99        18.05        85.05        13.02        49.05 
TCGA-25-2392 TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 TCGA-25-2399 TCGA-25-2400 
        1.02        38.04         3.02        12.00        19.99        42.02 
TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 
        2.96        29.00        30.97        26.96        78.87        44.71 
TCGA-29-1693 TCGA-29-1694 TCGA-29-1696 TCGA-29-1697 TCGA-29-1699 TCGA-29-1702 
      101.75        38.53        33.70        31.17         0.53        18.64 
TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 
       59.67        18.25        41.95        29.23        34.62        17.00 
TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 TCGA-29-1768 TCGA-29-1769 TCGA-29-1771 
       85.68        66.77        62.93        31.23        22.98        22.52 
TCGA-29-1776 TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 
       11.84        12.30        14.93         8.35         7.20         5.36 
TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 
       86.17        65.00        62.47        45.11         4.87        42.25 
TCGA-29-2436 TCGA-30-1853 TCGA-30-1856 TCGA-30-1859 TCGA-30-1861 TCGA-30-1862 
        9.76        36.26        15.68        48.07        34.78         6.08 
TCGA-30-1866 TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-31-1946 TCGA-31-1950 
       36.62        57.57        24.26        30.05        30.18        18.77 
TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-36-1568 TCGA-36-1569 
       22.45         6.71        42.51        44.09        28.73        29.06 
TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 
       21.53        22.85        22.55         8.55        30.05        25.74 
TCGA-36-1580 TCGA-36-1581 TCGA-36-2530 TCGA-36-2532 TCGA-36-2537 TCGA-36-2538 
       24.23        24.69        33.01        29.49        25.91        25.08 
TCGA-36-2540 TCGA-36-2542 TCGA-36-2545 TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 
       23.80        21.60        18.31        20.52        14.17         6.05 
TCGA-36-2551 TCGA-42-2587 TCGA-42-2588 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 
       16.14        23.74         9.44         7.46        22.39         1.48 
TCGA-57-1583 TCGA-57-1584 TCGA-57-1585 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 
       11.38        21.14         1.74        28.96        25.05        25.02 
TCGA-59-2349 TCGA-59-2350 TCGA-59-2352 TCGA-59-2354 TCGA-59-2363 TCGA-59-2372 
       80.12        22.32         9.40        34.39         5.39        44.78 
TCGA-61-1721 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1733 TCGA-61-1734 
       11.11        20.94        31.40        18.54        31.76        28.47 
TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1743 TCGA-61-1895 
       48.79        44.84        35.80         2.43        43.69         1.41 
TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1907 TCGA-61-1910 
        8.42         5.79        11.41        13.02        31.30        37.02 
TCGA-61-1915 TCGA-61-1917 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 
       67.73        43.43        38.17         1.97         5.52        14.50 
TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 
       17.98         3.98        30.61        30.64         1.18        45.96 
TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 
       45.40         4.80         4.77        51.72        71.74        61.64 
TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 
       55.50         6.48        76.83        20.68        44.52       125.72 
TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
        6.35        31.07         8.58 

  19Q GAIN MUTATED 19Q GAIN WILD-TYPE 
              0.26               0.30 
  19Q GAIN MUTATED 19Q GAIN WILD-TYPE 
            180.16             129.96 
  19Q GAIN MUTATED 19Q GAIN WILD-TYPE 
            25.925             29.060 
[1] "0.3 - 180.2 (25.9)" "0.3 - 130.0 (29.1)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"19Q GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"19Q GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE"   "19Q GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
  "19Q GAIN MUTATED"   "19Q GAIN MUTATED"   "19Q GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "19Q GAIN MUTATED" "19Q GAIN WILD-TYPE" "19Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"19Q GAIN WILD-TYPE" 
[1] "hr=" "1.1"
D35V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  19Q GAIN MUTATED         0   149                2
  19Q GAIN WILD-TYPE       2   399                0
D35V3, multiclass
                  clus
vv                 19Q GAIN MUTATED 19Q GAIN WILD-TYPE
  OMENTUM                         0                  2
  OVARY                         149                399
  PERITONEUM OVARY                2                  0
D35V4, continuous
D35V5, binary
                    cls
clus                   0   1
  19Q GAIN MUTATED     1 152
  19Q GAIN WILD-TYPE   2 407
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  19Q GAIN MUTATED      1  152
  19Q GAIN WILD-TYPE    2  407
     clus
vv    19Q GAIN MUTATED 19Q GAIN WILD-TYPE
  NO                 1                  2
  YES              152                407
                    vv
clus                 R0 R1 R2
  19Q GAIN MUTATED    5  6  0
  19Q GAIN WILD-TYPE  9 20  2
D35V6, multiclass
    clus
vv   19Q GAIN MUTATED 19Q GAIN WILD-TYPE
  R0                5                  9
  R1                6                 20
  R2                0                  2

Clustering(36) Variable = 20P GAIN MUTATION ANALYSIS
D36V1, survival
                    sevent
clus2                  0   1
  20P GAIN MUTATED   114 156
  20P GAIN WILD-TYPE 147 130
  20P GAIN MUTATED 20P GAIN WILD-TYPE 
               270                277 
  20P GAIN MUTATED 20P GAIN WILD-TYPE 
               156                130 
$`20P GAIN MUTATED`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1337 TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 
       40.24        41.00         2.01        18.51        11.87        65.49 
TCGA-04-1347 TCGA-04-1349 TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1364 
       63.06        21.57        63.98        65.46        49.28        33.67 
TCGA-04-1514 TCGA-04-1517 TCGA-04-1542 TCGA-04-1646 TCGA-04-1649 TCGA-04-1655 
       56.55        19.99        84.20        27.88        64.64        45.34 
TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 TCGA-09-1665 
       57.73        17.95        35.54         9.96        38.43        41.59 
TCGA-09-1668 TCGA-09-1670 TCGA-09-1674 TCGA-09-2043 TCGA-09-2051 TCGA-09-2053 
       55.36        17.98         8.55         6.15        63.09        39.75 
TCGA-09-2054 TCGA-10-0933 TCGA-10-0935 TCGA-10-0936 TCGA-10-0938 TCGA-13-0717 
       20.91        11.70        35.41        35.80        19.86        24.59 
TCGA-13-0723 TCGA-13-0724 TCGA-13-0725 TCGA-13-0727 TCGA-13-0751 TCGA-13-0757 
       39.58         2.73        12.39        15.19        55.17        11.18 
TCGA-13-0758 TCGA-13-0760 TCGA-13-0762 TCGA-13-0764 TCGA-13-0766 TCGA-13-0794 
       11.38        11.54        32.25        31.04        21.40        30.35 
TCGA-13-0800 TCGA-13-0802 TCGA-13-0803 TCGA-13-0884 TCGA-13-0885 TCGA-13-0887 
        8.12         8.19        43.82       107.18        91.40        66.64 
TCGA-13-0888 TCGA-13-0890 TCGA-13-0899 TCGA-13-0904 TCGA-13-0913 TCGA-13-0919 
       70.39        67.99        56.15        48.33        29.98        14.89 
TCGA-13-0920 TCGA-13-0923 TCGA-13-0924 TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 
       13.81         6.41         6.08         6.05         5.92         6.84 
TCGA-13-1412 TCGA-13-1481 TCGA-13-1482 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 
        5.33        87.06        61.71        98.04        20.68        22.39 
TCGA-13-1488 TCGA-13-1492 TCGA-13-1497 TCGA-13-1499 TCGA-13-1504 TCGA-13-1505 
       70.82        73.55        54.31        38.37        16.57         4.21 
TCGA-13-1506 TCGA-13-1507 TCGA-13-2057 TCGA-13-2061 TCGA-13-2065 TCGA-20-0990 
        4.41         4.77        14.24        10.78         8.75        25.94 
TCGA-20-0991 TCGA-20-1685 TCGA-20-1686 TCGA-23-1021 TCGA-23-1024 TCGA-23-1031 
       26.20        16.67         2.93        47.54        15.39        18.87 
TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 TCGA-23-1114 TCGA-23-1121 
        2.24        51.35        54.51         3.22        68.68         6.38 
TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 TCGA-23-2077 TCGA-23-2084 
       39.09        33.47        58.13         0.53       115.89        49.84 
TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0979 TCGA-24-0982 TCGA-24-1105 
        4.70         4.50         7.63        41.56        22.32        47.41 
TCGA-24-1413 TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 TCGA-24-1430 TCGA-24-1431 
        6.31         0.76         6.25         6.02        28.34        19.17 
TCGA-24-1434 TCGA-24-1436 TCGA-24-1464 TCGA-24-1466 TCGA-24-1469 TCGA-24-1474 
       18.67         8.55        12.46        45.14         9.11        22.19 
TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 TCGA-24-1553 TCGA-24-1556 
       26.96        57.37        64.27        16.21        58.09        70.62 
TCGA-24-1557 TCGA-24-1564 TCGA-24-1604 TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 
       39.88        25.87        88.34         8.32         3.48         3.72 
TCGA-24-1845 TCGA-24-1847 TCGA-24-1850 TCGA-24-1923 TCGA-24-1928 TCGA-24-1930 
        3.81        11.28         5.49        22.65        11.05        81.11 
TCGA-24-2019 TCGA-24-2020 TCGA-24-2026 TCGA-24-2027 TCGA-24-2033 TCGA-24-2260 
        4.87       151.99        34.82       109.68        18.48        36.16 
TCGA-24-2261 TCGA-24-2267 TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 
        0.79        47.54        70.45        44.58         0.82        67.36 
TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-25-1312 TCGA-25-1313 TCGA-25-1316 
       36.23        16.64        33.11         1.02        26.93        37.02 
TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 
        1.02        34.98        65.00        36.95        33.96         2.99 
TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 
       12.00         2.96        18.58        15.78         0.36        20.58 
TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 TCGA-25-1870 TCGA-25-1871 
        0.30        56.94        60.59        35.54        14.93        24.99 
TCGA-25-1877 TCGA-25-1878 TCGA-25-2393 TCGA-25-2396 TCGA-25-2398 TCGA-25-2400 
       18.05        85.05        38.04         3.02        45.01        42.02 
TCGA-25-2404 TCGA-25-2408 TCGA-29-1688 TCGA-29-1691 TCGA-29-1695 TCGA-29-1697 
       29.00        30.97        78.87        47.18         0.79        31.17 
TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 TCGA-29-1703 TCGA-29-1707 TCGA-29-1710 
       68.28         0.53        16.90        59.67        41.95        29.23 
TCGA-29-1761 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1769 TCGA-29-1770 
       17.00        66.77        62.93        39.09        22.98        24.36 
TCGA-29-1775 TCGA-29-1778 TCGA-29-1783 TCGA-29-1784 TCGA-29-2414 TCGA-29-2425 
       12.36        14.93         7.20         5.36        86.17        65.00 
TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 TCGA-30-1714 TCGA-30-1718 TCGA-30-1855 
       45.11         4.87        42.25        38.07        51.91         2.47 
TCGA-30-1856 TCGA-30-1859 TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 
       15.68        48.07        34.78         6.08        36.62         1.18 
TCGA-30-1892 TCGA-31-1950 TCGA-31-1951 TCGA-31-1955 TCGA-31-1959 TCGA-36-1568 
       48.79        18.77        22.45        42.51         2.17        28.73 
TCGA-36-1569 TCGA-36-1571 TCGA-36-1575 TCGA-36-1576 TCGA-36-1580 TCGA-36-2547 
       29.06        22.85         8.55        30.05        24.23        20.52 
TCGA-36-2548 TCGA-36-2551 TCGA-36-2552 TCGA-42-2587 TCGA-42-2590 TCGA-42-2593 
       14.17        16.14        11.47        23.74         7.46         1.48 
TCGA-57-1583 TCGA-57-1585 TCGA-57-1586 TCGA-59-2351 TCGA-59-2352 TCGA-59-2355 
       11.38         1.74        22.32       116.12         9.40         2.14 
TCGA-59-2363 TCGA-59-2372 TCGA-61-1722 TCGA-61-1727 TCGA-61-1730 TCGA-61-1733 
        5.39        44.78         8.05        18.54         4.34        31.76 
TCGA-61-1743 TCGA-61-1899 TCGA-61-1900 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 
       43.69         8.42         5.79        13.02         9.07        34.13 
TCGA-61-1907 TCGA-61-1911 TCGA-61-1914 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 
       31.30        42.48        56.58        67.73        43.43        15.75 
TCGA-61-2003 TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 TCGA-61-2097 TCGA-61-2098 
        3.98        30.61        39.85        30.64        60.62        65.49 
TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2113 TCGA-61-2612 TCGA-61-2614 
       55.50         6.48        76.83        22.22         6.35         8.58 

$`20P GAIN WILD-TYPE`
TCGA-04-1335 TCGA-04-1336 TCGA-04-1338 TCGA-04-1348 TCGA-04-1361 TCGA-04-1362 
        1.81        49.15        46.62        48.76        32.52        44.32 
TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1516 TCGA-04-1525 TCGA-04-1530 
       76.54        71.47        82.36        41.59        38.37       119.08 
TCGA-04-1536 TCGA-04-1638 TCGA-04-1644 TCGA-04-1648 TCGA-04-1651 TCGA-04-1652 
       29.06        55.40        48.89        28.64        36.23        31.86 
TCGA-04-1654 TCGA-09-0364 TCGA-09-0365 TCGA-09-1662 TCGA-09-1664 TCGA-09-1666 
       47.70        29.16         9.47        89.33        74.89        57.57 
TCGA-09-1667 TCGA-09-1669 TCGA-09-1672 TCGA-09-1673 TCGA-09-1675 TCGA-09-2044 
       61.87        30.48         5.85         3.02        97.55         6.12 
TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2055 TCGA-09-2056 
       35.15         4.50       112.37        71.11        26.93        12.46 
TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 
       54.31        25.91        81.47        18.48        33.24        32.28 
TCGA-10-0934 TCGA-10-0937 TCGA-13-0714 TCGA-13-0720 TCGA-13-0726 TCGA-13-0730 
        3.88        15.12         6.21        44.55        31.07        17.79 
TCGA-13-0755 TCGA-13-0761 TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 
        2.47        34.06         8.42        38.93        36.72        28.70 
TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0801 TCGA-13-0804 TCGA-13-0805 
       19.56         8.71         7.79         8.28        35.28        35.28 
TCGA-13-0807 TCGA-13-0883 TCGA-13-0886 TCGA-13-0889 TCGA-13-0891 TCGA-13-0893 
       13.61        68.91        74.27        61.81        69.01        43.36 
TCGA-13-0897 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0905 TCGA-13-0906 
       57.47        57.07        19.36        47.38        47.84        44.94 
TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0916 TCGA-13-0921 
       44.84        37.08        27.68        34.06        21.14         4.64 
TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1410 TCGA-13-1411 TCGA-13-1477 
       10.88         6.61         7.36         4.70         4.21        54.61 
TCGA-13-1483 TCGA-13-1489 TCGA-13-1491 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 
       29.39        82.88        52.44        38.17        49.22         4.24 
TCGA-13-1498 TCGA-13-1500 TCGA-13-1501 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 
       37.61        13.97        32.84         4.14         2.56         3.88 
TCGA-13-1512 TCGA-13-2059 TCGA-13-2060 TCGA-13-2071 TCGA-20-0987 TCGA-20-0996 
        3.09        12.23         8.58         6.28        23.05        72.20 
TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 TCGA-20-1687 TCGA-23-1022 TCGA-23-1023 
       27.48        25.38        19.07         2.66        42.51        40.54 
TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 TCGA-23-1113 
       26.83        31.73        49.41         8.81        29.10        31.20 
TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 TCGA-23-1120 TCGA-23-2072 
        4.57        33.30        86.01       129.96         4.27        24.95 
TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2641 TCGA-24-0968 TCGA-24-0970 
       87.48        91.66        77.00         2.76        19.63        11.64 
TCGA-24-0975 TCGA-24-0980 TCGA-24-1103 TCGA-24-1104 TCGA-24-1416 TCGA-24-1417 
       21.80         7.66        54.08        63.55         6.38         7.82 
TCGA-24-1418 TCGA-24-1419 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 
        7.99         7.86         5.95         5.36         4.80        17.36 
TCGA-24-1435 TCGA-24-1463 TCGA-24-1467 TCGA-24-1470 TCGA-24-1471 TCGA-24-1549 
       43.53        72.92       105.99         3.42         1.18        56.58 
TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1555 TCGA-24-1558 TCGA-24-1560 
       41.06        51.91        41.39        88.50        19.53        44.09 
TCGA-24-1562 TCGA-24-1563 TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1614 
       45.50        47.70        10.26        17.23        90.15        48.33 
TCGA-24-1616 TCGA-24-1846 TCGA-24-1849 TCGA-24-1920 TCGA-24-1924 TCGA-24-1927 
       38.24         4.37         5.75         9.80        30.21        16.41 
TCGA-24-2023 TCGA-24-2024 TCGA-24-2029 TCGA-24-2030 TCGA-24-2035 TCGA-24-2036 
       44.84        58.16        14.43        53.95        28.18        64.01 
TCGA-24-2038 TCGA-24-2254 TCGA-24-2262 TCGA-24-2271 TCGA-24-2297 TCGA-24-2298 
       44.48        57.07         0.36        31.63        55.86        53.26 
TCGA-25-1314 TCGA-25-1315 TCGA-25-1625 TCGA-25-1630 TCGA-25-1635 TCGA-25-2042 
       31.99        51.06        18.02         7.86        51.22        13.02 
TCGA-25-2391 TCGA-25-2392 TCGA-25-2397 TCGA-25-2399 TCGA-25-2401 TCGA-25-2409 
       49.05         1.02        12.00        19.99         2.96        26.96 
TCGA-29-1690 TCGA-29-1693 TCGA-29-1694 TCGA-29-1696 TCGA-29-1702 TCGA-29-1705 
       44.71       101.75        38.53        33.70        18.64        18.25 
TCGA-29-1711 TCGA-29-1762 TCGA-29-1768 TCGA-29-1771 TCGA-29-1774 TCGA-29-1776 
       34.62        85.68        31.23        22.52        17.29        11.84 
TCGA-29-1777 TCGA-29-1781 TCGA-29-1785 TCGA-29-2427 TCGA-29-2432 TCGA-29-2434 
       12.30         8.35        34.62        62.47        11.84        11.47 
TCGA-29-2436 TCGA-30-1853 TCGA-30-1857 TCGA-30-1860 TCGA-30-1880 TCGA-30-1887 
        9.76        36.26         0.26        44.91        57.57        24.26 
TCGA-30-1891 TCGA-31-1944 TCGA-31-1946 TCGA-31-1953 TCGA-31-1956 TCGA-36-1570 
       30.05        45.57        30.18         6.71        44.09        21.53 
TCGA-36-1574 TCGA-36-1577 TCGA-36-1578 TCGA-36-1581 TCGA-36-2529 TCGA-36-2530 
       22.55        25.74        27.85        24.69        35.05        33.01 
TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 
       29.49        29.79        25.91        25.08        23.80        21.60 
TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2549 TCGA-42-2582 TCGA-42-2588 
        2.24        20.98        18.31         6.05        26.04         9.44 
TCGA-42-2589 TCGA-42-2591 TCGA-57-1582 TCGA-57-1584 TCGA-57-1992 TCGA-57-1993 
        7.56        22.39        24.03        21.14        28.96        25.05 
TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2354 TCGA-61-1721 
       25.02       180.16        80.12        22.32        34.39        11.11 
TCGA-61-1724 TCGA-61-1725 TCGA-61-1728 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 
       20.94        31.40        27.88        28.47        48.79        44.84 
TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1895 TCGA-61-1901 TCGA-61-1910 
       35.80         2.43        33.67         1.41        11.41        37.02 
TCGA-61-1913 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 
       48.92        38.17         1.97         5.52        14.50        17.98 
TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 
        1.18        45.96        45.40         4.80         4.77        51.72 
TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 
       71.74        61.64        58.39        20.68        44.52       125.72 
TCGA-61-2613 
       31.07 

  20P GAIN MUTATED 20P GAIN WILD-TYPE 
              0.30               0.26 
  20P GAIN MUTATED 20P GAIN WILD-TYPE 
            151.99             180.16 
  20P GAIN MUTATED 20P GAIN WILD-TYPE 
            24.475             29.390 
[1] "0.3 - 152.0 (24.5)" "0.3 - 180.2 (29.4)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-61-2614 
  "20P GAIN MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-61-2614 
  "20P GAIN MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE"   "20P GAIN MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "20P GAIN MUTATED" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"20P GAIN WILD-TYPE"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "20P GAIN MUTATED"   "20P GAIN MUTATED"   "20P GAIN MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" "20P GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "20P GAIN MUTATED"   "20P GAIN MUTATED" "20P GAIN WILD-TYPE" 
        TCGA-61-2614 
  "20P GAIN MUTATED" 
[1] "hr=" "1.3"
D36V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  20P GAIN MUTATED         2   270                1
  20P GAIN WILD-TYPE       0   278                1
D36V3, multiclass
                  clus
vv                 20P GAIN MUTATED 20P GAIN WILD-TYPE
  OMENTUM                         2                  0
  OVARY                         270                278
  PERITONEUM OVARY                1                  1
D36V4, continuous
D36V5, binary
                    cls
clus                   0   1
  20P GAIN MUTATED     2 275
  20P GAIN WILD-TYPE   1 284
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  20P GAIN MUTATED      2  275
  20P GAIN WILD-TYPE    1  284
     clus
vv    20P GAIN MUTATED 20P GAIN WILD-TYPE
  NO                 2                  1
  YES              275                284
                    vv
clus                 R0 R1 R2
  20P GAIN MUTATED    5 11  1
  20P GAIN WILD-TYPE  9 15  1
D36V6, multiclass
    clus
vv   20P GAIN MUTATED 20P GAIN WILD-TYPE
  R0                5                  9
  R1               11                 15
  R2                1                  1

Clustering(37) Variable = 20Q GAIN MUTATION ANALYSIS
D37V1, survival
                    sevent
clus2                  0   1
  20Q GAIN MUTATED   141 171
  20Q GAIN WILD-TYPE 120 115
  20Q GAIN MUTATED 20Q GAIN WILD-TYPE 
               312                235 
  20Q GAIN MUTATED 20Q GAIN WILD-TYPE 
               171                115 
$`20Q GAIN MUTATED`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1337 TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 
       40.24        41.00         2.01        18.51        11.87        65.49 
TCGA-04-1347 TCGA-04-1349 TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1364 
       63.06        21.57        63.98        65.46        49.28        33.67 
TCGA-04-1371 TCGA-04-1514 TCGA-04-1517 TCGA-04-1525 TCGA-04-1542 TCGA-04-1646 
       82.36        56.55        19.99        38.37        84.20        27.88 
TCGA-04-1648 TCGA-04-1649 TCGA-04-1652 TCGA-04-1655 TCGA-09-0364 TCGA-09-0366 
       28.64        64.64        31.86        45.34        29.16        57.73 
TCGA-09-0367 TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 TCGA-09-1665 TCGA-09-1668 
       17.95        35.54         9.96        38.43        41.59        55.36 
TCGA-09-1669 TCGA-09-1670 TCGA-09-1674 TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 
       30.48        17.98         8.55        63.09        39.75        20.91 
TCGA-10-0933 TCGA-10-0935 TCGA-10-0936 TCGA-10-0938 TCGA-13-0717 TCGA-13-0723 
       11.70        35.41        35.80        19.86        24.59        39.58 
TCGA-13-0724 TCGA-13-0725 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0757 
        2.73        12.39        15.19        17.79        55.17        11.18 
TCGA-13-0758 TCGA-13-0760 TCGA-13-0762 TCGA-13-0766 TCGA-13-0794 TCGA-13-0795 
       11.38        11.54        32.25        21.40        30.35        19.56 
TCGA-13-0800 TCGA-13-0802 TCGA-13-0803 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 
        8.12         8.19        43.82       107.18        91.40        74.27 
TCGA-13-0887 TCGA-13-0888 TCGA-13-0890 TCGA-13-0893 TCGA-13-0899 TCGA-13-0901 
       66.64        70.39        67.99        43.36        56.15        19.36 
TCGA-13-0905 TCGA-13-0906 TCGA-13-0911 TCGA-13-0913 TCGA-13-0919 TCGA-13-0920 
       47.84        44.94        27.68        29.98        14.89        13.81 
TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 
        6.41         6.08        10.88         6.05         5.92         6.84 
TCGA-13-1410 TCGA-13-1412 TCGA-13-1481 TCGA-13-1482 TCGA-13-1484 TCGA-13-1485 
        4.70         5.33        87.06        61.71        98.04        20.68 
TCGA-13-1487 TCGA-13-1492 TCGA-13-1499 TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 
       22.39        73.55        38.37        32.84        16.57         4.21 
TCGA-13-1506 TCGA-13-1507 TCGA-13-2057 TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 
        4.41         4.77        14.24         8.58        10.78         8.75 
TCGA-20-0990 TCGA-20-0991 TCGA-20-1682 TCGA-20-1685 TCGA-20-1686 TCGA-23-1021 
       25.94        26.20        27.48        16.67         2.93        47.54 
TCGA-23-1022 TCGA-23-1024 TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 
       42.51        15.39        18.87         2.24        51.35        54.51 
TCGA-23-1111 TCGA-23-1114 TCGA-23-1116 TCGA-23-1117 TCGA-23-1121 TCGA-23-1122 
        3.22        68.68         4.57        33.30         6.38        39.09 
TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 TCGA-23-2077 TCGA-23-2079 TCGA-23-2084 
       33.47        58.13         0.53       115.89        91.66        49.84 
TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 TCGA-24-0975 TCGA-24-0979 
        4.70         4.50         7.63        19.63        21.80        41.56 
TCGA-24-0982 TCGA-24-1103 TCGA-24-1105 TCGA-24-1413 TCGA-24-1417 TCGA-24-1418 
       22.32        54.08        47.41         6.31         7.82         7.99 
TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 TCGA-24-1426 TCGA-24-1427 TCGA-24-1431 
        0.76         6.25         6.02         5.36         4.80        19.17 
TCGA-24-1434 TCGA-24-1436 TCGA-24-1464 TCGA-24-1466 TCGA-24-1469 TCGA-24-1474 
       18.67         8.55        12.46        45.14         9.11        22.19 
TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 TCGA-24-1553 TCGA-24-1556 
       26.96        57.37        64.27        16.21        58.09        70.62 
TCGA-24-1557 TCGA-24-1558 TCGA-24-1604 TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 
       39.88        19.53        88.34         8.32         3.48         3.72 
TCGA-24-1845 TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 
        3.81        11.28         5.75         5.49         9.80        22.65 
TCGA-24-1924 TCGA-24-1928 TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 TCGA-24-2026 
       30.21        11.05        81.11         4.87       151.99        34.82 
TCGA-24-2027 TCGA-24-2033 TCGA-24-2260 TCGA-24-2261 TCGA-24-2267 TCGA-24-2280 
      109.68        18.48        36.16         0.79        47.54        70.45 
TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 
       44.58         0.82        67.36        36.23        16.64        33.11 
TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 
        1.02        26.93        31.99        37.02         1.02        34.98 
TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 
       65.00        36.95        33.96         2.99        12.00         2.96 
TCGA-25-1623 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 TCGA-25-1631 TCGA-25-1632 
       18.58        15.78         0.36        20.58         0.30        56.94 
TCGA-25-1633 TCGA-25-1634 TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 TCGA-25-1878 
       60.59        35.54        14.93        24.99        18.05        85.05 
TCGA-25-2393 TCGA-25-2396 TCGA-25-2398 TCGA-25-2400 TCGA-25-2404 TCGA-25-2408 
       38.04         3.02        45.01        42.02        29.00        30.97 
TCGA-29-1688 TCGA-29-1691 TCGA-29-1693 TCGA-29-1695 TCGA-29-1697 TCGA-29-1698 
       78.87        47.18       101.75         0.79        31.17        68.28 
TCGA-29-1699 TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 
        0.53        16.90        18.64        59.67        18.25        41.95 
TCGA-29-1710 TCGA-29-1761 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1769 
       29.23        17.00        66.77        62.93        39.09        22.98 
TCGA-29-1770 TCGA-29-1774 TCGA-29-1775 TCGA-29-1778 TCGA-29-1783 TCGA-29-1784 
       24.36        17.29        12.36        14.93         7.20         5.36 
TCGA-29-2414 TCGA-29-2425 TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 TCGA-29-2434 
       86.17        65.00        45.11         4.87        42.25        11.47 
TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 TCGA-30-1855 TCGA-30-1856 TCGA-30-1859 
        9.76        38.07        51.91         2.47        15.68        48.07 
TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1887 TCGA-30-1892 
       34.78         6.08        36.62         1.18        24.26        48.79 
TCGA-31-1944 TCGA-31-1950 TCGA-31-1951 TCGA-31-1955 TCGA-31-1959 TCGA-36-1569 
       45.57        18.77        22.45        42.51         2.17        29.06 
TCGA-36-1571 TCGA-36-1575 TCGA-36-1576 TCGA-36-1580 TCGA-36-1581 TCGA-36-2534 
       22.85         8.55        30.05        24.23        24.69        29.79 
TCGA-36-2547 TCGA-36-2548 TCGA-36-2551 TCGA-36-2552 TCGA-42-2587 TCGA-42-2591 
       20.52        14.17        16.14        11.47        23.74        22.39 
TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 
        1.48        24.03        11.38         1.74        22.32        28.96 
TCGA-57-1993 TCGA-57-1994 TCGA-59-2351 TCGA-59-2352 TCGA-59-2355 TCGA-59-2372 
       25.05        25.02       116.12         9.40         2.14        44.78 
TCGA-61-1722 TCGA-61-1727 TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 TCGA-61-1737 
        8.05        18.54        27.88         4.34        31.76        44.84 
TCGA-61-1741 TCGA-61-1743 TCGA-61-1899 TCGA-61-1900 TCGA-61-1903 TCGA-61-1904 
       33.67        43.69         8.42         5.79        13.02         9.07 
TCGA-61-1906 TCGA-61-1907 TCGA-61-1911 TCGA-61-1914 TCGA-61-1915 TCGA-61-1917 
       34.13        31.30        42.48        56.58        67.73        43.43 
TCGA-61-1918 TCGA-61-2003 TCGA-61-2009 TCGA-61-2012 TCGA-61-2097 TCGA-61-2098 
       15.75         3.98        39.85        30.64        60.62        65.49 
TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2113 TCGA-61-2612 TCGA-61-2614 
       55.50         6.48        76.83        22.22         6.35         8.58 

$`20Q GAIN WILD-TYPE`
TCGA-04-1335 TCGA-04-1336 TCGA-04-1338 TCGA-04-1348 TCGA-04-1361 TCGA-04-1362 
        1.81        49.15        46.62        48.76        32.52        44.32 
TCGA-04-1365 TCGA-04-1367 TCGA-04-1516 TCGA-04-1530 TCGA-04-1536 TCGA-04-1638 
       76.54        71.47        41.59       119.08        29.06        55.40 
TCGA-04-1644 TCGA-04-1651 TCGA-04-1654 TCGA-09-0365 TCGA-09-1662 TCGA-09-1664 
       48.89        36.23        47.70         9.47        89.33        74.89 
TCGA-09-1666 TCGA-09-1667 TCGA-09-1672 TCGA-09-1673 TCGA-09-1675 TCGA-09-2043 
       57.57        61.87         5.85         3.02        97.55         6.15 
TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2055 
        6.12        35.15         4.50       112.37        71.11        26.93 
TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 
       12.46        54.31        25.91        81.47        18.48        33.24 
TCGA-10-0931 TCGA-10-0934 TCGA-10-0937 TCGA-13-0714 TCGA-13-0720 TCGA-13-0726 
       32.28         3.88        15.12         6.21        44.55        31.07 
TCGA-13-0755 TCGA-13-0761 TCGA-13-0764 TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 
        2.47        34.06        31.04         8.42        38.93        36.72 
TCGA-13-0793 TCGA-13-0797 TCGA-13-0799 TCGA-13-0801 TCGA-13-0804 TCGA-13-0805 
       28.70         8.71         7.79         8.28        35.28        35.28 
TCGA-13-0807 TCGA-13-0883 TCGA-13-0889 TCGA-13-0891 TCGA-13-0897 TCGA-13-0900 
       13.61        68.91        61.81        69.01        57.47        57.07 
TCGA-13-0903 TCGA-13-0904 TCGA-13-0908 TCGA-13-0910 TCGA-13-0912 TCGA-13-0916 
       47.38        48.33        44.84        37.08        34.06        21.14 
TCGA-13-0921 TCGA-13-1404 TCGA-13-1405 TCGA-13-1411 TCGA-13-1477 TCGA-13-1483 
        4.64         6.61         7.36         4.21        54.61        29.39 
TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 
       70.82        82.88        52.44        38.17        49.22         4.24 
TCGA-13-1497 TCGA-13-1498 TCGA-13-1500 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 
       54.31        37.61        13.97         4.14         2.56         3.88 
TCGA-13-1512 TCGA-13-2059 TCGA-13-2071 TCGA-20-0987 TCGA-20-0996 TCGA-20-1683 
        3.09        12.23         6.28        23.05        72.20        25.38 
TCGA-20-1684 TCGA-20-1687 TCGA-23-1023 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 
       19.07         2.66        40.54        26.83        31.73        49.41 
TCGA-23-1029 TCGA-23-1030 TCGA-23-1113 TCGA-23-1118 TCGA-23-1119 TCGA-23-1120 
        8.81        29.10        31.20        86.01       129.96         4.27 
TCGA-23-2072 TCGA-23-2078 TCGA-23-2081 TCGA-23-2641 TCGA-24-0970 TCGA-24-0980 
       24.95        87.48        77.00         2.76        11.64         7.66 
TCGA-24-1104 TCGA-24-1416 TCGA-24-1419 TCGA-24-1425 TCGA-24-1428 TCGA-24-1430 
       63.55         6.38         7.86         5.95        17.36        28.34 
TCGA-24-1435 TCGA-24-1463 TCGA-24-1467 TCGA-24-1470 TCGA-24-1471 TCGA-24-1549 
       43.53        72.92       105.99         3.42         1.18        56.58 
TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1555 TCGA-24-1560 TCGA-24-1562 
       41.06        51.91        41.39        88.50        44.09        45.50 
TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1614 
       47.70        25.87        10.26        17.23        90.15        48.33 
TCGA-24-1616 TCGA-24-1846 TCGA-24-1927 TCGA-24-2023 TCGA-24-2024 TCGA-24-2029 
       38.24         4.37        16.41        44.84        58.16        14.43 
TCGA-24-2030 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2262 
       53.95        28.18        64.01        44.48        57.07         0.36 
TCGA-24-2271 TCGA-24-2297 TCGA-24-2298 TCGA-25-1315 TCGA-25-1625 TCGA-25-1630 
       31.63        55.86        53.26        51.06        18.02         7.86 
TCGA-25-1635 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 TCGA-25-2397 TCGA-25-2399 
       51.22        13.02        49.05         1.02        12.00        19.99 
TCGA-25-2401 TCGA-25-2409 TCGA-29-1690 TCGA-29-1694 TCGA-29-1696 TCGA-29-1711 
        2.96        26.96        44.71        38.53        33.70        34.62 
TCGA-29-1762 TCGA-29-1768 TCGA-29-1771 TCGA-29-1776 TCGA-29-1777 TCGA-29-1781 
       85.68        31.23        22.52        11.84        12.30         8.35 
TCGA-29-1785 TCGA-29-2427 TCGA-29-2432 TCGA-30-1853 TCGA-30-1857 TCGA-30-1860 
       34.62        62.47        11.84        36.26         0.26        44.91 
TCGA-30-1880 TCGA-30-1891 TCGA-31-1946 TCGA-31-1953 TCGA-31-1956 TCGA-36-1568 
       57.57        30.05        30.18         6.71        44.09        28.73 
TCGA-36-1570 TCGA-36-1574 TCGA-36-1577 TCGA-36-1578 TCGA-36-2529 TCGA-36-2530 
       21.53        22.55        25.74        27.85        35.05        33.01 
TCGA-36-2532 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 
       29.49        25.91        25.08        23.80        21.60         2.24 
TCGA-36-2544 TCGA-36-2545 TCGA-36-2549 TCGA-42-2582 TCGA-42-2588 TCGA-42-2589 
       20.98        18.31         6.05        26.04         9.44         7.56 
TCGA-42-2590 TCGA-57-1584 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2354 
        7.46        21.14       180.16        80.12        22.32        34.39 
TCGA-59-2363 TCGA-61-1721 TCGA-61-1724 TCGA-61-1725 TCGA-61-1734 TCGA-61-1736 
        5.39        11.11        20.94        31.40        28.47        48.79 
TCGA-61-1738 TCGA-61-1740 TCGA-61-1895 TCGA-61-1901 TCGA-61-1910 TCGA-61-1913 
       35.80         2.43         1.41        11.41        37.02        48.92 
TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2008 
       38.17         1.97         5.52        14.50        17.98        30.61 
TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 
        1.18        45.96        45.40         4.80         4.77        51.72 
TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 
       71.74        61.64        58.39        20.68        44.52       125.72 
TCGA-61-2613 
       31.07 

  20Q GAIN MUTATED 20Q GAIN WILD-TYPE 
              0.30               0.26 
  20Q GAIN MUTATED 20Q GAIN WILD-TYPE 
            151.99             180.16 
  20Q GAIN MUTATED 20Q GAIN WILD-TYPE 
            24.475             31.070 
[1] "0.3 - 152.0 (24.5)" "0.3 - 180.2 (31.1)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-61-2614 
  "20Q GAIN MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-61-2614 
  "20Q GAIN MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"20Q GAIN WILD-TYPE"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED"   "20Q GAIN MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" "20Q GAIN WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "20Q GAIN MUTATED"   "20Q GAIN MUTATED" "20Q GAIN WILD-TYPE" 
        TCGA-61-2614 
  "20Q GAIN MUTATED" 
[1] "hr=" "1.3"
D37V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  20Q GAIN MUTATED         2   312                1
  20Q GAIN WILD-TYPE       0   236                1
D37V3, multiclass
                  clus
vv                 20Q GAIN MUTATED 20Q GAIN WILD-TYPE
  OMENTUM                         2                  0
  OVARY                         312                236
  PERITONEUM OVARY                1                  1
D37V4, continuous
D37V5, binary
                    cls
clus                   0   1
  20Q GAIN MUTATED     2 318
  20Q GAIN WILD-TYPE   1 241
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  20Q GAIN MUTATED      2  318
  20Q GAIN WILD-TYPE    1  241
     clus
vv    20Q GAIN MUTATED 20Q GAIN WILD-TYPE
  NO                 2                  1
  YES              318                241
                    vv
clus                 R0 R1 R2
  20Q GAIN MUTATED    7 12  1
  20Q GAIN WILD-TYPE  7 14  1
D37V6, multiclass
    clus
vv   20Q GAIN MUTATED 20Q GAIN WILD-TYPE
  R0                7                  7
  R1               12                 14
  R2                1                  1

Clustering(38) Variable = 21Q GAIN MUTATION ANALYSIS
D38V1, survival
                    sevent
clus2                  0   1
  21Q GAIN MUTATED    49  55
  21Q GAIN WILD-TYPE 212 231
  21Q GAIN MUTATED 21Q GAIN WILD-TYPE 
               104                443 
  21Q GAIN MUTATED 21Q GAIN WILD-TYPE 
                55                231 
$`21Q GAIN MUTATED`
TCGA-04-1332 TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1349 TCGA-04-1361 
       41.00        18.51        11.87        65.49        21.57        32.52 
TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 TCGA-04-1536 
       82.36        56.55        41.59        19.99        38.37        29.06 
TCGA-04-1644 TCGA-09-0365 TCGA-09-0366 TCGA-09-1670 TCGA-09-2043 TCGA-10-0928 
       48.89         9.47        57.73        17.98         6.15        18.48 
TCGA-10-0936 TCGA-13-0724 TCGA-13-0726 TCGA-13-0762 TCGA-13-0768 TCGA-13-0795 
       35.80         2.73        31.07        32.25         8.42        19.56 
TCGA-13-0888 TCGA-13-0890 TCGA-13-0893 TCGA-13-0904 TCGA-13-0911 TCGA-13-1408 
       70.39        67.99        43.36        48.33        27.68         5.92 
TCGA-13-1410 TCGA-13-1496 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-2059 
        4.70         4.24        16.57         4.21         4.41        12.23 
TCGA-20-0990 TCGA-20-0991 TCGA-20-1683 TCGA-23-1021 TCGA-23-1110 TCGA-23-1116 
       25.94        26.20        25.38        47.54        54.51         4.57 
TCGA-23-1119 TCGA-23-1121 TCGA-23-2078 TCGA-23-2643 TCGA-24-0979 TCGA-24-1104 
      129.96         6.38        87.48         4.70        41.56        63.55 
TCGA-24-1424 TCGA-24-1427 TCGA-24-1436 TCGA-24-1464 TCGA-24-1466 TCGA-24-1474 
        6.02         4.80         8.55        12.46        45.14        22.19 
TCGA-24-1552 TCGA-24-1558 TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 TCGA-24-1847 
       41.39        19.53         8.32         3.48         3.72        11.28 
TCGA-24-1923 TCGA-24-1928 TCGA-24-2019 TCGA-24-2020 TCGA-24-2260 TCGA-24-2280 
       22.65        11.05         4.87       151.99        36.16        70.45 
TCGA-24-2295 TCGA-25-1312 TCGA-25-1319 TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 
       33.11         1.02        65.00        12.00         2.96        18.58 
TCGA-25-1626 TCGA-25-1628 TCGA-25-1877 TCGA-25-2393 TCGA-25-2401 TCGA-29-1701 
       15.78        20.58        18.05        38.04         2.96        16.90 
TCGA-29-1707 TCGA-29-1762 TCGA-29-1764 TCGA-29-1766 TCGA-29-1778 TCGA-29-2428 
       41.95        85.68        62.93        39.09        14.93        45.11 
TCGA-30-1861 TCGA-30-1862 TCGA-30-1867 TCGA-31-1959 TCGA-36-1571 TCGA-36-1578 
       34.78         6.08         1.18         2.17        22.85        27.85 
TCGA-36-2529 TCGA-36-2542 TCGA-57-1585 TCGA-61-1722 TCGA-61-1743 TCGA-61-1906 
       35.05        21.60         1.74         8.05        43.69        34.13 
TCGA-61-1907 TCGA-61-1915 TCGA-61-2003 TCGA-61-2101 TCGA-61-2102 TCGA-61-2111 
       31.30        67.73         3.98        55.50         6.48       125.72 
TCGA-61-2612 TCGA-61-2614 
        6.35         8.58 

$`21Q GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 TCGA-04-1347 
       40.24         1.81        49.15         2.01        46.62        63.06 
TCGA-04-1348 TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1362 TCGA-04-1364 
       48.76        63.98        65.46        49.28        44.32        33.67 
TCGA-04-1365 TCGA-04-1367 TCGA-04-1530 TCGA-04-1542 TCGA-04-1638 TCGA-04-1646 
       76.54        71.47       119.08        84.20        55.40        27.88 
TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 TCGA-04-1655 
       28.64        64.64        36.23        31.86        47.70        45.34 
TCGA-09-0364 TCGA-09-0367 TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 
       29.16        17.95        35.54         9.96        38.43        89.33 
TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 
       74.89        41.59        57.57        61.87        55.36        30.48 
TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 TCGA-09-2044 TCGA-09-2045 
        5.85         3.02         8.55        97.55         6.12        35.15 
TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 
        4.50       112.37        71.11        63.09        39.75        20.91 
TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0930 
       26.93        12.46        54.31        25.91        81.47        33.24 
TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0937 TCGA-10-0938 
       32.28        11.70         3.88        35.41        15.12        19.86 
TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0725 TCGA-13-0727 
        6.21        24.59        44.55        39.58        12.39        15.19 
TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 
       17.79        55.17         2.47        11.18        11.38        11.54 
TCGA-13-0761 TCGA-13-0764 TCGA-13-0766 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 
       34.06        31.04        21.40        38.93        36.72        28.70 
TCGA-13-0794 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 TCGA-13-0802 
       30.35         8.71         7.79         8.12         8.28         8.19 
TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 
       43.82        35.28        35.28        13.61        68.91       107.18 
TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0889 TCGA-13-0891 TCGA-13-0897 
       91.40        74.27        66.64        61.81        69.01        57.47 
TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0905 TCGA-13-0906 
       56.15        57.07        19.36        47.38        47.84        44.94 
TCGA-13-0908 TCGA-13-0910 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 
       44.84        37.08        34.06        29.98        21.14        14.89 
TCGA-13-0920 TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 
       13.81         4.64         6.41         6.08        10.88         6.61 
TCGA-13-1405 TCGA-13-1407 TCGA-13-1409 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 
        7.36         6.05         6.84         4.21         5.33        54.61 
TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 
       87.06        61.71        29.39        98.04        20.68        22.39 
TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 
       70.82        82.88        52.44        73.55        38.17        49.22 
TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1507 
       54.31        37.61        38.37        13.97        32.84         4.77 
TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 TCGA-13-2060 
        4.14         2.56         3.88         3.09        14.24         8.58 
TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 TCGA-20-0996 TCGA-20-1682 
       10.78         8.75         6.28        23.05        72.20        27.48 
TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1022 TCGA-23-1023 
       19.07        16.67         2.93         2.66        42.51        40.54 
TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 
       15.39        26.83        31.73        49.41         8.81        29.10 
TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 
       18.87         2.24        51.35         3.22        31.20        68.68 
TCGA-23-1117 TCGA-23-1118 TCGA-23-1120 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 
       33.30        86.01         4.27        39.09        33.47        58.13 
TCGA-23-1809 TCGA-23-2072 TCGA-23-2077 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 
        0.53        24.95       115.89        91.66        77.00        49.84 
TCGA-23-2641 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 
        2.76         4.50         7.63        19.63        11.64        21.80 
TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 
        7.66        22.32        54.08        47.41         6.31         6.38 
TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1425 
        7.82         7.99         7.86         0.76         6.25         5.95 
TCGA-24-1426 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 
        5.36        17.36        28.34        19.17        18.67        43.53 
TCGA-24-1463 TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 TCGA-24-1544 
       72.92       105.99         9.11         3.42         1.18        26.96 
TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 
       57.37        64.27        16.21        56.58        41.06        51.91 
TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1560 TCGA-24-1562 
       58.09        88.50        70.62        39.88        44.09        45.50 
TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 
       47.70        25.87        10.26        17.23        90.15        88.34 
TCGA-24-1614 TCGA-24-1616 TCGA-24-1845 TCGA-24-1846 TCGA-24-1849 TCGA-24-1850 
       48.33        38.24         3.81         4.37         5.75         5.49 
TCGA-24-1920 TCGA-24-1924 TCGA-24-1927 TCGA-24-1930 TCGA-24-2023 TCGA-24-2024 
        9.80        30.21        16.41        81.11        44.84        58.16 
TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 
       34.82       109.68        14.43        53.95        18.48        28.18 
TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 
       64.01        44.48        57.07         0.79         0.36        47.54 
TCGA-24-2271 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 
       31.63        44.58         0.82        67.36        36.23        16.64 
TCGA-24-2297 TCGA-24-2298 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 
       55.86        53.26        26.93        31.99        51.06        37.02 
TCGA-25-1317 TCGA-25-1318 TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 TCGA-25-1625 
        1.02        34.98        36.95        33.96         2.99        18.02 
TCGA-25-1627 TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 
        0.36         7.86         0.30        56.94        60.59        35.54 
TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 
       51.22        14.93        24.99        85.05        13.02        49.05 
TCGA-25-2392 TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 
        1.02         3.02        12.00        45.01        19.99        42.02 
TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 
       29.00        30.97        26.96        78.87        44.71        47.18 
TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 
      101.75        38.53         0.79        33.70        31.17        68.28 
TCGA-29-1699 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1710 TCGA-29-1711 
        0.53        18.64        59.67        18.25        29.23        34.62 
TCGA-29-1761 TCGA-29-1763 TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 
       17.00        66.77        31.23        22.98        24.36        22.52 
TCGA-29-1774 TCGA-29-1775 TCGA-29-1776 TCGA-29-1777 TCGA-29-1781 TCGA-29-1783 
       17.29        12.36        11.84        12.30         8.35         7.20 
TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2429 
        5.36        34.62        86.17        65.00        62.47         4.87 
TCGA-29-2431 TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 
       42.25        11.84        11.47         9.76        38.07        51.91 
TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 
       36.26         2.47        15.68         0.26        48.07        44.91 
TCGA-30-1866 TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 
       36.62        57.57        24.26        30.05        48.79        45.57 
TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 
       30.18        18.77        22.45         6.71        42.51        44.09 
TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 
       28.73        29.06        21.53        22.55         8.55        30.05 
TCGA-36-1577 TCGA-36-1580 TCGA-36-1581 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 
       25.74        24.23        24.69        33.01        29.49        29.79 
TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 
       25.91        25.08        23.80         2.24        20.98        18.31 
TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 TCGA-36-2552 TCGA-42-2582 
       20.52        14.17         6.05        16.14        11.47        26.04 
TCGA-42-2587 TCGA-42-2588 TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 
       23.74         9.44         7.56         7.46        22.39         1.48 
TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 
       24.03        11.38        21.14        22.32        28.96        25.05 
TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 
       25.02       180.16        80.12        22.32       116.12         9.40 
TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 TCGA-61-1724 
       34.39         2.14         5.39        44.78        11.11        20.94 
TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 
       31.40        18.54        27.88         4.34        31.76        28.47 
TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1895 
       48.79        44.84        35.80         2.43        33.67         1.41 
TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1910 
        8.42         5.79        11.41        13.02         9.07        37.02 
TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 
       42.48        48.92        56.58        43.43        15.75        38.17 
TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2008 TCGA-61-2009 
        1.97         5.52        14.50        17.98        30.61        39.85 
TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 
       30.64         1.18        45.96        45.40         4.80         4.77 
TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 
       51.72        71.74        61.64        58.39        60.62        65.49 
TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 TCGA-61-2113 TCGA-61-2613 
       76.83        20.68        44.52        22.22        31.07 

  21Q GAIN MUTATED 21Q GAIN WILD-TYPE 
              1.02               0.26 
  21Q GAIN MUTATED 21Q GAIN WILD-TYPE 
            151.99             180.16 
  21Q GAIN MUTATED 21Q GAIN WILD-TYPE 
            21.895             29.060 
[1] "1.0 - 152.0 (21.9)" "0.3 - 180.2 (29.1)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "21Q GAIN MUTATED"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "21Q GAIN MUTATED"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "21Q GAIN MUTATED"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "21Q GAIN MUTATED"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "21Q GAIN MUTATED"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "21Q GAIN MUTATED"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-61-2614 
  "21Q GAIN MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "21Q GAIN MUTATED"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "21Q GAIN MUTATED"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "21Q GAIN MUTATED"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "21Q GAIN MUTATED"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "21Q GAIN MUTATED"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "21Q GAIN MUTATED"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-61-2614 
  "21Q GAIN MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "21Q GAIN MUTATED"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "21Q GAIN MUTATED"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "21Q GAIN MUTATED"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "21Q GAIN MUTATED"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "21Q GAIN MUTATED"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED"   "21Q GAIN MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "21Q GAIN MUTATED"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"21Q GAIN WILD-TYPE" "21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"21Q GAIN WILD-TYPE"   "21Q GAIN MUTATED" "21Q GAIN WILD-TYPE" 
        TCGA-61-2614 
  "21Q GAIN MUTATED" 
[1] "hr=" "1.1"
D38V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  21Q GAIN MUTATED         0   104                2
  21Q GAIN WILD-TYPE       2   444                0
D38V3, multiclass
                  clus
vv                 21Q GAIN MUTATED 21Q GAIN WILD-TYPE
  OMENTUM                         0                  2
  OVARY                         104                444
  PERITONEUM OVARY                2                  0
D38V4, continuous
D38V5, binary
                    cls
clus                   0   1
  21Q GAIN MUTATED     0 109
  21Q GAIN WILD-TYPE   3 450
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  21Q GAIN MUTATED      0  109
  21Q GAIN WILD-TYPE    3  450
     clus
vv    21Q GAIN MUTATED 21Q GAIN WILD-TYPE
  NO                 0                  3
  YES              109                450
                    vv
clus                 R0 R1 R2
  21Q GAIN MUTATED    1  7  0
  21Q GAIN WILD-TYPE 13 19  2
D38V6, multiclass
    clus
vv   21Q GAIN MUTATED 21Q GAIN WILD-TYPE
  R0                1                 13
  R1                7                 19
  R2                0                  2

Clustering(39) Variable = 22Q GAIN MUTATION ANALYSIS
D39V1, survival
                    sevent
clus2                  0   1
  22Q GAIN MUTATED    12   9
  22Q GAIN WILD-TYPE 249 277
  22Q GAIN MUTATED 22Q GAIN WILD-TYPE 
                21                526 
  22Q GAIN MUTATED 22Q GAIN WILD-TYPE 
                 9                277 
$`22Q GAIN MUTATED`
TCGA-13-0760 TCGA-13-0762 TCGA-13-1405 TCGA-13-1488 TCGA-23-1119 TCGA-24-1463 
       11.54        32.25         7.36        70.82       129.96        72.92 
TCGA-24-1556 TCGA-24-1928 TCGA-25-1627 TCGA-29-1699 TCGA-29-1764 TCGA-29-1770 
       70.62        11.05         0.36         0.53        62.93        24.36 
TCGA-29-1777 TCGA-29-2425 TCGA-29-2427 TCGA-30-1861 TCGA-31-1950 TCGA-36-2547 
       12.30        65.00        62.47        34.78        18.77        20.52 
TCGA-57-1585 TCGA-61-1904 TCGA-61-2111 
        1.74         9.07       125.72 

$`22Q GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 
       18.51        11.87        65.49        63.06        48.76        21.57 
TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 
       63.98        65.46        49.28        32.52        44.32        33.67 
TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 
       76.54        71.47        82.36        56.55        41.59        19.99 
TCGA-04-1525 TCGA-04-1530 TCGA-04-1536 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 
       38.37       119.08        29.06        84.20        55.40        48.89 
TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 
       27.88        28.64        64.64        36.23        31.86        47.70 
TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 
       45.34        29.16         9.47        57.73        17.95        35.54 
TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 
        9.96        38.43        89.33        74.89        41.59        57.57 
TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 
       61.87        55.36        30.48        17.98         5.85         3.02 
TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 
        8.55        97.55         6.15         6.12        35.15         4.50 
TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 
      112.37        71.11        63.09        39.75        20.91        26.93 
TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 
       12.46        54.31        25.91        81.47        18.48        33.24 
TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 
       32.28        11.70         3.88        35.41        35.80        15.12 
TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 
       19.86         6.21        24.59        44.55        39.58         2.73 
TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 
       12.39        31.07        15.19        17.79        55.17         2.47 
TCGA-13-0757 TCGA-13-0758 TCGA-13-0761 TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 
       11.18        11.38        34.06        31.04        21.40         8.42 
TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 
       38.93        36.72        28.70        30.35        19.56         8.71 
TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 
        7.79         8.12         8.28         8.19        43.82        35.28 
TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 
       35.28        13.61        68.91       107.18        91.40        74.27 
TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 
       66.64        70.39        61.81        67.99        69.01        43.36 
TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 
       57.47        56.15        57.07        19.36        47.38        48.33 
TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 
       47.84        44.94        44.84        37.08        27.68        34.06 
TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 TCGA-13-0921 TCGA-13-0923 
       29.98        21.14        14.89        13.81         4.64         6.41 
TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 
        6.08        10.88         6.61         6.05         5.92         6.84 
TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 
        4.70         4.21         5.33        54.61        87.06        61.71 
TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 TCGA-13-1489 TCGA-13-1491 
       29.39        98.04        20.68        22.39        82.88        52.44 
TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 
       73.55        38.17        49.22         4.24        54.31        37.61 
TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 
       38.37        13.97        32.84        16.57         4.21         4.41 
TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 
        4.77         4.14         2.56         3.88         3.09        14.24 
TCGA-13-2059 TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 
       12.23         8.58        10.78         8.75         6.28        23.05 
TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 
       25.94        26.20        72.20        27.48        25.38        19.07 
TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 TCGA-23-1022 TCGA-23-1023 
       16.67         2.93         2.66        47.54        42.51        40.54 
TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 
       15.39        26.83        31.73        49.41         8.81        29.10 
TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 
       18.87         2.24        51.35        54.51         3.22        31.20 
TCGA-23-1114 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1120 TCGA-23-1121 
       68.68         4.57        33.30        86.01         4.27         6.38 
TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 TCGA-23-2072 TCGA-23-2077 
       39.09        33.47        58.13         0.53        24.95       115.89 
TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 
       87.48        91.66        77.00        49.84         2.76         4.70 
TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 
        4.50         7.63        19.63        11.64        21.80        41.56 
TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 
        7.66        22.32        54.08        63.55        47.41         6.31 
TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 
        6.38         7.82         7.99         7.86         0.76         6.25 
TCGA-24-1424 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 
        6.02         5.95         5.36         4.80        17.36        28.34 
TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 TCGA-24-1464 TCGA-24-1466 
       19.17        18.67        43.53         8.55        12.46        45.14 
TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 
      105.99         9.11         3.42         1.18        22.19        26.96 
TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 
       57.37        64.27        16.21        56.58        41.06        51.91 
TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 
       41.39        58.09        88.50        39.88        19.53        44.09 
TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 
       45.50        47.70        25.87        10.26        17.23        90.15 
TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 
       88.34        48.33        38.24         8.32         3.48         3.72 
TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 
        3.81         4.37        11.28         5.75         5.49         9.80 
TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 
       22.65        30.21        16.41        81.11         4.87       151.99 
TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 
       44.84        58.16        34.82       109.68        14.43        53.95 
TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 
       18.48        28.18        64.01        44.48        57.07        36.16 
TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 
        0.79         0.36        47.54        31.63        70.45        44.58 
TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 
        0.82        67.36        36.23        16.64        33.11        55.86 
TCGA-24-2298 TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 
       53.26         1.02        26.93        31.99        51.06        37.02 
TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 
        1.02        34.98        65.00        36.95        33.96         2.99 
TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1628 
       12.00         2.96        18.58        18.02        15.78        20.58 
TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 TCGA-25-1635 
        7.86         0.30        56.94        60.59        35.54        51.22 
TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 
       14.93        24.99        18.05        85.05        13.02        49.05 
TCGA-25-2392 TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 
        1.02        38.04         3.02        12.00        45.01        19.99 
TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 
       42.02         2.96        29.00        30.97        26.96        78.87 
TCGA-29-1690 TCGA-29-1691 TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 
       44.71        47.18       101.75        38.53         0.79        33.70 
TCGA-29-1697 TCGA-29-1698 TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 
       31.17        68.28        16.90        18.64        59.67        18.25 
TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 TCGA-29-1763 
       41.95        29.23        34.62        17.00        85.68        66.77 
TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 
       39.09        31.23        22.98        22.52        17.29        12.36 
TCGA-29-1776 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 
       11.84        14.93         8.35         7.20         5.36        34.62 
TCGA-29-2414 TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 TCGA-29-2434 
       86.17        45.11         4.87        42.25        11.84        11.47 
TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 
        9.76        38.07        51.91        36.26         2.47        15.68 
TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 
        0.26        48.07        44.91         6.08        36.62         1.18 
TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 
       57.57        24.26        30.05        48.79        45.57        30.18 
TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 
       22.45         6.71        42.51        44.09         2.17        28.73 
TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 
       29.06        21.53        22.85        22.55         8.55        30.05 
TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 TCGA-36-1581 TCGA-36-2529 TCGA-36-2530 
       25.74        27.85        24.23        24.69        35.05        33.01 
TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 
       29.49        29.79        25.91        25.08        23.80        21.60 
TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 
        2.24        20.98        18.31        14.17         6.05        16.14 
TCGA-36-2552 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 TCGA-42-2589 TCGA-42-2590 
       11.47        26.04        23.74         9.44         7.56         7.46 
TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 TCGA-57-1586 
       22.39         1.48        24.03        11.38        21.14        22.32 
TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 
       28.96        25.05        25.02       180.16        80.12        22.32 
TCGA-59-2351 TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 
      116.12         9.40        34.39         2.14         5.39        44.78 
TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 
       11.11         8.05        20.94        31.40        18.54        27.88 
TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 
        4.34        31.76        28.47        48.79        44.84        35.80 
TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 
        2.43        33.67        43.69         1.41         8.42         5.79 
TCGA-61-1901 TCGA-61-1903 TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 
       11.41        13.02        34.13        31.30        37.02        42.48 
TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 
       48.92        56.58        67.73        43.43        15.75        38.17 
TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 
        1.97         5.52        14.50        17.98         3.98        30.61 
TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 
       39.85        30.64         1.18        45.96        45.40         4.80 
TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 
        4.77        51.72        71.74        61.64        58.39        60.62 
TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 
       65.49        55.50         6.48        76.83        20.68        44.52 
TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
       22.22         6.35        31.07         8.58 

  22Q GAIN MUTATED 22Q GAIN WILD-TYPE 
              0.36               0.26 
  22Q GAIN MUTATED 22Q GAIN WILD-TYPE 
            129.96             180.16 
  22Q GAIN MUTATED 22Q GAIN WILD-TYPE 
             24.36              28.26 
[1] "0.4 - 130.0 (24.4)" "0.3 - 180.2 (28.3)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
  "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"22Q GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
  "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"22Q GAIN WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
  "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "22Q GAIN MUTATED" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE"   "22Q GAIN MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" "22Q GAIN WILD-TYPE" 
        TCGA-61-2614 
"22Q GAIN WILD-TYPE" 
[1] "hr=" "1.7"
D39V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  22Q GAIN MUTATED         0    22                0
  22Q GAIN WILD-TYPE       2   526                2
D39V3, multiclass
                  clus
vv                 22Q GAIN MUTATED 22Q GAIN WILD-TYPE
  OMENTUM                         0                  2
  OVARY                          22                526
  PERITONEUM OVARY                0                  2
D39V4, continuous
D39V5, binary
                    cls
clus                   0   1
  22Q GAIN MUTATED     0  22
  22Q GAIN WILD-TYPE   3 537
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  22Q GAIN MUTATED      0   22
  22Q GAIN WILD-TYPE    3  537
     clus
vv    22Q GAIN MUTATED 22Q GAIN WILD-TYPE
  NO                 0                  3
  YES               22                537
                    vv
clus                 R0 R1 R2
  22Q GAIN MUTATED    1  2  0
  22Q GAIN WILD-TYPE 13 24  2
D39V6, multiclass
    clus
vv   22Q GAIN MUTATED 22Q GAIN WILD-TYPE
  R0                1                 13
  R1                2                 24
  R2                0                  2

Clustering(40) Variable = XQ GAIN MUTATION ANALYSIS
D40V1, survival
                   sevent
clus2                 0   1
  XQ GAIN MUTATED    53  62
  XQ GAIN WILD-TYPE 208 224
  XQ GAIN MUTATED XQ GAIN WILD-TYPE 
              115               432 
  XQ GAIN MUTATED XQ GAIN WILD-TYPE 
               62               224 
$`XQ GAIN MUTATED`
TCGA-04-1342 TCGA-04-1346 TCGA-04-1351 TCGA-04-1525 TCGA-04-1652 TCGA-04-1655 
       18.51        65.49        65.46        38.37        31.86        45.34 
TCGA-09-1674 TCGA-09-2043 TCGA-09-2045 TCGA-09-2048 TCGA-10-0927 TCGA-10-0933 
        8.55         6.15        35.15         4.50        81.47        11.70 
TCGA-10-0936 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 TCGA-13-0726 
       35.80        24.59        44.55        39.58         2.73        31.07 
TCGA-13-0727 TCGA-13-0751 TCGA-13-0757 TCGA-13-0761 TCGA-13-0795 TCGA-13-0797 
       15.19        55.17        11.18        34.06        19.56         8.71 
TCGA-13-0800 TCGA-13-0804 TCGA-13-0884 TCGA-13-0890 TCGA-13-0897 TCGA-13-0901 
        8.12        35.28       107.18        67.99        57.47        19.36 
TCGA-13-0916 TCGA-13-0920 TCGA-13-0921 TCGA-13-0923 TCGA-13-1404 TCGA-13-1409 
       21.14        13.81         4.64         6.41         6.61         6.84 
TCGA-13-1410 TCGA-13-1484 TCGA-13-1485 TCGA-13-1488 TCGA-13-1504 TCGA-13-1505 
        4.70        98.04        20.68        70.82        16.57         4.21 
TCGA-13-2057 TCGA-13-2060 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 TCGA-20-0991 
       14.24         8.58         8.75         6.28        23.05        26.20 
TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1031 TCGA-23-1109 TCGA-23-1110 
       16.67         2.93         2.66        18.87        51.35        54.51 
TCGA-23-1111 TCGA-23-1114 TCGA-23-1809 TCGA-23-2077 TCGA-23-2084 TCGA-24-1104 
        3.22        68.68         0.53       115.89        49.84        63.55 
TCGA-24-1436 TCGA-24-1474 TCGA-24-1556 TCGA-24-1563 TCGA-24-1564 TCGA-24-1604 
        8.55        22.19        70.62        47.70        25.87        88.34 
TCGA-24-1842 TCGA-24-1843 TCGA-24-1846 TCGA-24-1924 TCGA-24-1928 TCGA-24-2038 
        8.32         3.48         4.37        30.21        11.05        44.48 
TCGA-24-2261 TCGA-24-2281 TCGA-25-1319 TCGA-25-1320 TCGA-25-1329 TCGA-25-1623 
        0.79        44.58        65.00        36.95         2.96        18.58 
TCGA-25-1632 TCGA-25-1633 TCGA-25-1871 TCGA-25-1877 TCGA-25-2397 TCGA-25-2398 
       56.94        60.59        24.99        18.05        12.00        45.01 
TCGA-29-1691 TCGA-29-1699 TCGA-29-1710 TCGA-29-1764 TCGA-29-1766 TCGA-29-1776 
       47.18         0.53        29.23        62.93        39.09        11.84 
TCGA-29-1778 TCGA-29-2425 TCGA-30-1718 TCGA-30-1855 TCGA-30-1862 TCGA-30-1867 
       14.93        65.00        51.91         2.47         6.08         1.18 
TCGA-31-1951 TCGA-36-2529 TCGA-36-2543 TCGA-36-2552 TCGA-57-1584 TCGA-57-1586 
       22.45        35.05         2.24        11.47        21.14        22.32 
TCGA-59-2348 TCGA-59-2372 TCGA-61-1730 TCGA-61-1741 TCGA-61-1899 TCGA-61-1900 
      180.16        44.78         4.34        33.67         8.42         5.79 
TCGA-61-1911 TCGA-61-1915 TCGA-61-2018 TCGA-61-2087 TCGA-61-2109 TCGA-61-2612 
       42.48        67.73        45.40         4.80        20.68         6.35 
TCGA-61-2614 
        8.58 

$`XQ GAIN WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1343 TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 TCGA-04-1356 
       11.87        63.06        48.76        21.57        63.98        49.28 
TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 
       32.52        44.32        33.67        76.54        71.47        82.36 
TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1530 TCGA-04-1536 TCGA-04-1542 
       56.55        41.59        19.99       119.08        29.06        84.20 
TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 
       55.40        48.89        27.88        28.64        64.64        36.23 
TCGA-04-1654 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 
       47.70        29.16         9.47        57.73        17.95        35.54 
TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 
        9.96        38.43        89.33        74.89        41.59        57.57 
TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 
       61.87        55.36        30.48        17.98         5.85         3.02 
TCGA-09-1675 TCGA-09-2044 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 
       97.55         6.12       112.37        71.11        63.09        39.75 
TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0928 
       20.91        26.93        12.46        54.31        25.91        18.48 
TCGA-10-0930 TCGA-10-0931 TCGA-10-0934 TCGA-10-0935 TCGA-10-0937 TCGA-10-0938 
       33.24        32.28         3.88        35.41        15.12        19.86 
TCGA-13-0714 TCGA-13-0725 TCGA-13-0730 TCGA-13-0755 TCGA-13-0758 TCGA-13-0760 
        6.21        12.39        17.79         2.47        11.38        11.54 
TCGA-13-0762 TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 
       32.25        31.04        21.40         8.42        38.93        36.72 
TCGA-13-0793 TCGA-13-0794 TCGA-13-0799 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 
       28.70        30.35         7.79         8.28         8.19        43.82 
TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 
       35.28        13.61        68.91        91.40        74.27        66.64 
TCGA-13-0888 TCGA-13-0889 TCGA-13-0891 TCGA-13-0893 TCGA-13-0899 TCGA-13-0900 
       70.39        61.81        69.01        43.36        56.15        57.07 
TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 
       47.38        48.33        47.84        44.94        44.84        37.08 
TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 TCGA-13-0919 TCGA-13-0924 TCGA-13-1403 
       27.68        34.06        29.98        14.89         6.08        10.88 
TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 
        7.36         6.05         5.92         4.21         5.33        54.61 
TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1487 TCGA-13-1489 TCGA-13-1491 
       87.06        61.71        29.39        22.39        82.88        52.44 
TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 
       73.55        38.17        49.22         4.24        54.31        37.61 
TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 
       38.37        13.97        32.84         4.41         4.77         4.14 
TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2059 TCGA-13-2061 TCGA-20-0990 
        2.56         3.88         3.09        12.23        10.78        25.94 
TCGA-20-0996 TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 TCGA-23-1021 TCGA-23-1022 
       72.20        27.48        25.38        19.07        47.54        42.51 
TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 
       40.54        15.39        26.83        31.73        49.41         8.81 
TCGA-23-1030 TCGA-23-1032 TCGA-23-1113 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 
       29.10         2.24        31.20         4.57        33.30        86.01 
TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 
      129.96         4.27         6.38        39.09        33.47        58.13 
TCGA-23-2072 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2641 TCGA-23-2643 
       24.95        87.48        91.66        77.00         2.76         4.70 
TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 
        4.50         7.63        19.63        11.64        21.80        41.56 
TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 
        7.66        22.32        54.08        47.41         6.31         6.38 
TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 
        7.82         7.99         7.86         0.76         6.25         6.02 
TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 
        5.95         5.36         4.80        17.36        28.34        19.17 
TCGA-24-1434 TCGA-24-1435 TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 
       18.67        43.53        72.92        12.46        45.14       105.99 
TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 
        9.11         3.42         1.18        26.96        57.37        64.27 
TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 
       16.21        56.58        41.06        51.91        41.39        58.09 
TCGA-24-1555 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 TCGA-24-1565 
       88.50        39.88        19.53        44.09        45.50        10.26 
TCGA-24-1567 TCGA-24-1603 TCGA-24-1614 TCGA-24-1616 TCGA-24-1844 TCGA-24-1845 
       17.23        90.15        48.33        38.24         3.72         3.81 
TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 TCGA-24-1927 
       11.28         5.75         5.49         9.80        22.65        16.41 
TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 
       81.11         4.87       151.99        44.84        58.16        34.82 
TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 
      109.68        14.43        53.95        18.48        28.18        64.01 
TCGA-24-2254 TCGA-24-2260 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 
       57.07        36.16         0.36        47.54        31.63        70.45 
TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 
        0.82        67.36        36.23        16.64        33.11        55.86 
TCGA-24-2298 TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 
       53.26         1.02        26.93        31.99        51.06        37.02 
TCGA-25-1317 TCGA-25-1318 TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1625 
        1.02        34.98        33.96         2.99        12.00        18.02 
TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 TCGA-25-1630 TCGA-25-1631 TCGA-25-1634 
       15.78         0.36        20.58         7.86         0.30        35.54 
TCGA-25-1635 TCGA-25-1870 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 
       51.22        14.93        85.05        13.02        49.05         1.02 
TCGA-25-2393 TCGA-25-2396 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 
       38.04         3.02        19.99        42.02         2.96        29.00 
TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1693 TCGA-29-1694 
       30.97        26.96        78.87        44.71       101.75        38.53 
TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1701 TCGA-29-1702 
        0.79        33.70        31.17        68.28        16.90        18.64 
TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 
       59.67        18.25        41.95        34.62        17.00        85.68 
TCGA-29-1763 TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 
       66.77        31.23        22.98        24.36        22.52        17.29 
TCGA-29-1775 TCGA-29-1777 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 
       12.36        12.30         8.35         7.20         5.36        34.62 
TCGA-29-2414 TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 
       86.17        62.47        45.11         4.87        42.25        11.84 
TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1853 TCGA-30-1856 TCGA-30-1857 
       11.47         9.76        38.07        36.26        15.68         0.26 
TCGA-30-1859 TCGA-30-1860 TCGA-30-1861 TCGA-30-1866 TCGA-30-1880 TCGA-30-1887 
       48.07        44.91        34.78        36.62        57.57        24.26 
TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1953 
       30.05        48.79        45.57        30.18        18.77         6.71 
TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 
       42.51        44.09         2.17        28.73        29.06        21.53 
TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 
       22.85        22.55         8.55        30.05        25.74        27.85 
TCGA-36-1580 TCGA-36-1581 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 
       24.23        24.69        33.01        29.49        29.79        25.91 
TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 
       25.08        23.80        21.60        20.98        18.31        20.52 
TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 
       14.17         6.05        16.14        26.04        23.74         9.44 
TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 
        7.56         7.46        22.39         1.48        24.03        11.38 
TCGA-57-1585 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 TCGA-59-2349 TCGA-59-2350 
        1.74        28.96        25.05        25.02        80.12        22.32 
TCGA-59-2351 TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-61-1721 
      116.12         9.40        34.39         2.14         5.39        11.11 
TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 TCGA-61-1733 
        8.05        20.94        31.40        18.54        27.88        31.76 
TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1743 
       28.47        48.79        44.84        35.80         2.43        43.69 
TCGA-61-1895 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 TCGA-61-1907 
        1.41        11.41        13.02         9.07        34.13        31.30 
TCGA-61-1910 TCGA-61-1913 TCGA-61-1914 TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 
       37.02        48.92        56.58        43.43        15.75        38.17 
TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 
        1.97         5.52        14.50        17.98         3.98        30.61 
TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2088 TCGA-61-2092 
       39.85        30.64         1.18        45.96         4.77        51.72 
TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 
       71.74        61.64        58.39        60.62        65.49        55.50 
TCGA-61-2102 TCGA-61-2104 TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 TCGA-61-2613 
        6.48        76.83        44.52       125.72        22.22        31.07 

  XQ GAIN MUTATED XQ GAIN WILD-TYPE 
             0.53              0.26 
  XQ GAIN MUTATED XQ GAIN WILD-TYPE 
           180.16            151.99 
  XQ GAIN MUTATED XQ GAIN WILD-TYPE 
            21.14             29.06 
[1] "0.5 - 180.2 (21.1)" "0.3 - 152.0 (29.1)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "XQ GAIN MUTATED"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "XQ GAIN MUTATED"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "XQ GAIN MUTATED"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
  "XQ GAIN MUTATED"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "XQ GAIN MUTATED"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
  "XQ GAIN MUTATED"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "XQ GAIN MUTATED"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "XQ GAIN MUTATED"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "XQ GAIN MUTATED"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
  "XQ GAIN MUTATED"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "XQ GAIN MUTATED"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
  "XQ GAIN MUTATED"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "XQ GAIN MUTATED"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "XQ GAIN MUTATED"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED"   "XQ GAIN MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "XQ GAIN MUTATED"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
  "XQ GAIN MUTATED"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "XQ GAIN MUTATED"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
  "XQ GAIN MUTATED"   "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" "XQ GAIN WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
  "XQ GAIN MUTATED" "XQ GAIN WILD-TYPE"   "XQ GAIN MUTATED" 
[1] "hr=" "1.1"
D40V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  XQ GAIN MUTATED         0   114                2
  XQ GAIN WILD-TYPE       2   434                0
D40V3, multiclass
                  clus
vv                 XQ GAIN MUTATED XQ GAIN WILD-TYPE
  OMENTUM                        0                 2
  OVARY                        114               434
  PERITONEUM OVARY               2                 0
D40V4, continuous
D40V5, binary
                   cls
clus                  0   1
  XQ GAIN MUTATED     0 117
  XQ GAIN WILD-TYPE   3 442
[1] "tbl2"
                   cls
clus                [,1] [,2]
  XQ GAIN MUTATED      0  117
  XQ GAIN WILD-TYPE    3  442
     clus
vv    XQ GAIN MUTATED XQ GAIN WILD-TYPE
  NO                0                 3
  YES             117               442
                   vv
clus                R0 R1 R2
  XQ GAIN MUTATED    2  5  0
  XQ GAIN WILD-TYPE 12 21  2
D40V6, multiclass
    clus
vv   XQ GAIN MUTATED XQ GAIN WILD-TYPE
  R0               2                12
  R1               5                21
  R2               0                 2

Clustering(41) Variable = 1P LOSS MUTATION ANALYSIS
D41V1, survival
                   sevent
clus2                 0   1
  1P LOSS MUTATED    28  30
  1P LOSS WILD-TYPE 233 256
  1P LOSS MUTATED 1P LOSS WILD-TYPE 
               58               489 
  1P LOSS MUTATED 1P LOSS WILD-TYPE 
               30               256 
$`1P LOSS MUTATED`
TCGA-04-1349 TCGA-04-1351 TCGA-04-1362 TCGA-04-1514 TCGA-04-1542 TCGA-04-1638 
       21.57        65.46        44.32        56.55        84.20        55.40 
TCGA-09-1659 TCGA-09-1669 TCGA-09-1672 TCGA-09-2056 TCGA-10-0928 TCGA-10-0935 
        9.96        30.48         5.85        12.46        18.48        35.41 
TCGA-13-0761 TCGA-13-0762 TCGA-13-0794 TCGA-13-0905 TCGA-13-1407 TCGA-13-1409 
       34.06        32.25        30.35        47.84         6.05         6.84 
TCGA-13-1477 TCGA-13-1484 TCGA-13-1489 TCGA-13-1497 TCGA-13-2065 TCGA-20-1682 
       54.61        98.04        82.88        54.31         8.75        27.48 
TCGA-20-1686 TCGA-20-1687 TCGA-23-1022 TCGA-23-2643 TCGA-23-2645 TCGA-24-0982 
        2.93         2.66        42.51         4.70         4.50        22.32 
TCGA-24-1103 TCGA-24-1105 TCGA-24-1423 TCGA-24-1424 TCGA-24-1850 TCGA-24-2020 
       54.08        47.41         6.25         6.02         5.49       151.99 
TCGA-25-1316 TCGA-25-1632 TCGA-25-1877 TCGA-25-2396 TCGA-25-2408 TCGA-29-1690 
       37.02        56.94        18.05         3.02        30.97        44.71 
TCGA-29-1768 TCGA-29-2429 TCGA-30-1853 TCGA-30-1859 TCGA-30-1860 TCGA-36-1569 
       31.23         4.87        36.26        48.07        44.91        29.06 
TCGA-36-1576 TCGA-36-1580 TCGA-36-2540 TCGA-36-2552 TCGA-57-1585 TCGA-59-2352 
       30.05        24.23        23.80        11.47         1.74         9.40 
TCGA-61-1727 TCGA-61-1918 TCGA-61-2012 TCGA-61-2101 
       18.54        15.75        30.64        55.50 

$`1P LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1350 
       18.51        11.87        65.49        63.06        48.76        63.98 
TCGA-04-1356 TCGA-04-1361 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 
       49.28        32.52        33.67        76.54        71.47        82.36 
TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 TCGA-04-1530 TCGA-04-1536 TCGA-04-1644 
       41.59        19.99        38.37       119.08        29.06        48.89 
TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 
       27.88        28.64        64.64        36.23        31.86        47.70 
TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 
       45.34        29.16         9.47        57.73        17.95        35.54 
TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 
       38.43        89.33        74.89        41.59        57.57        61.87 
TCGA-09-1668 TCGA-09-1670 TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 
       55.36        17.98         3.02         8.55        97.55         6.15 
TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 
        6.12        35.15         4.50       112.37        71.11        63.09 
TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 
       39.75        20.91        26.93        54.31        25.91        81.47 
TCGA-10-0930 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0936 TCGA-10-0937 
       33.24        32.28        11.70         3.88        35.80        15.12 
TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 
       19.86         6.21        24.59        44.55        39.58         2.73 
TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 
       12.39        31.07        15.19        17.79        55.17         2.47 
TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 
       11.18        11.38        11.54        31.04        21.40         8.42 
TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 
       38.93        36.72        28.70        19.56         8.71         7.79 
TCGA-13-0800 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 
        8.12         8.28         8.19        43.82        35.28        35.28 
TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 
       13.61        68.91       107.18        91.40        74.27        66.64 
TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 
       70.39        61.81        67.99        69.01        43.36        57.47 
TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0906 
       56.15        57.07        19.36        47.38        48.33        44.94 
TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 
       44.84        37.08        27.68        34.06        29.98        21.14 
TCGA-13-0919 TCGA-13-0920 TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 
       14.89        13.81         4.64         6.41         6.08        10.88 
TCGA-13-1404 TCGA-13-1405 TCGA-13-1408 TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 
        6.61         7.36         5.92         4.70         4.21         5.33 
TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 
       87.06        61.71        29.39        20.68        22.39        70.82 
TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 TCGA-13-1498 
       52.44        73.55        38.17        49.22         4.24        37.61 
TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 
       38.37        13.97        32.84        16.57         4.21         4.41 
TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 
        4.77         4.14         2.56         3.88         3.09        14.24 
TCGA-13-2059 TCGA-13-2060 TCGA-13-2061 TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 
       12.23         8.58        10.78         6.28        23.05        25.94 
TCGA-20-0991 TCGA-20-0996 TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-23-1021 
       26.20        72.20        25.38        19.07        16.67        47.54 
TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 
       40.54        15.39        26.83        31.73        49.41         8.81 
TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 
       29.10        18.87         2.24        51.35        54.51         3.22 
TCGA-23-1113 TCGA-23-1114 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 
       31.20        68.68         4.57        33.30        86.01       129.96 
TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 
        4.27         6.38        39.09        33.47        58.13         0.53 
TCGA-23-2072 TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 
       24.95       115.89        87.48        91.66        77.00        49.84 
TCGA-23-2641 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 
        2.76         7.63        19.63        11.64        21.80        41.56 
TCGA-24-0980 TCGA-24-1104 TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 
        7.66        63.55         6.31         6.38         7.82         7.99 
TCGA-24-1419 TCGA-24-1422 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 
        7.86         0.76         5.95         5.36         4.80        17.36 
TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 
       28.34        19.17        18.67        43.53         8.55        72.92 
TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 
       12.46        45.14       105.99         9.11         3.42         1.18 
TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 
       22.19        26.96        57.37        64.27        16.21        56.58 
TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 
       41.06        51.91        41.39        58.09        88.50        70.62 
TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 
       39.88        19.53        44.09        45.50        47.70        25.87 
TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 
       10.26        17.23        90.15        88.34        48.33        38.24 
TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 
        8.32         3.48         3.72         3.81         4.37        11.28 
TCGA-24-1849 TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 
        5.75         9.80        22.65        30.21        16.41        11.05 
TCGA-24-1930 TCGA-24-2019 TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 
       81.11         4.87        44.84        58.16        34.82       109.68 
TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 
       14.43        53.95        18.48        28.18        64.01        44.48 
TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 
       57.07        36.16         0.79         0.36        47.54        31.63 
TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 
       70.45        44.58         0.82        67.36        36.23        16.64 
TCGA-24-2295 TCGA-24-2297 TCGA-24-2298 TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 
       33.11        55.86        53.26         1.02        26.93        31.99 
TCGA-25-1315 TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 
       51.06         1.02        34.98        65.00        36.95        33.96 
TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 
        2.99        12.00         2.96        18.58        18.02        15.78 
TCGA-25-1627 TCGA-25-1628 TCGA-25-1630 TCGA-25-1631 TCGA-25-1633 TCGA-25-1634 
        0.36        20.58         7.86         0.30        60.59        35.54 
TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 
       51.22        14.93        24.99        85.05        13.02        49.05 
TCGA-25-2392 TCGA-25-2393 TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 
        1.02        38.04        12.00        45.01        19.99        42.02 
TCGA-25-2401 TCGA-25-2404 TCGA-25-2409 TCGA-29-1688 TCGA-29-1691 TCGA-29-1693 
        2.96        29.00        26.96        78.87        47.18       101.75 
TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 
       38.53         0.79        33.70        31.17        68.28         0.53 
TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 
       16.90        18.64        59.67        18.25        41.95        29.23 
TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 
       34.62        17.00        85.68        66.77        62.93        39.09 
TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 TCGA-29-1776 
       22.98        24.36        22.52        17.29        12.36        11.84 
TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 
       12.30        14.93         8.35         7.20         5.36        34.62 
TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 TCGA-29-2431 TCGA-29-2432 
       86.17        65.00        62.47        45.11        42.25        11.84 
TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 TCGA-30-1855 TCGA-30-1856 
       11.47         9.76        38.07        51.91         2.47        15.68 
TCGA-30-1857 TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 
        0.26        34.78         6.08        36.62         1.18        57.57 
TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 
       24.26        30.05        48.79        45.57        30.18        18.77 
TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 
       22.45         6.71        42.51        44.09         2.17        28.73 
TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1577 TCGA-36-1578 
       21.53        22.85        22.55         8.55        25.74        27.85 
TCGA-36-1581 TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 
       24.69        35.05        33.01        29.49        29.79        25.91 
TCGA-36-2538 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 
       25.08        21.60         2.24        20.98        18.31        20.52 
TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 
       14.17         6.05        16.14        26.04        23.74         9.44 
TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 
        7.56         7.46        22.39         1.48        24.03        11.38 
TCGA-57-1584 TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 
       21.14        22.32        28.96        25.05        25.02       180.16 
TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 
       80.12        22.32       116.12        34.39         2.14         5.39 
TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 TCGA-61-1728 
       44.78        11.11         8.05        20.94        31.40        27.88 
TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 
        4.34        31.76        28.47        48.79        44.84        35.80 
TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 
        2.43        33.67        43.69         1.41         8.42         5.79 
TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 
       11.41        13.02         9.07        34.13        31.30        37.02 
TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 TCGA-61-1917 TCGA-61-1919 
       42.48        48.92        56.58        67.73        43.43        38.17 
TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 
        1.97         5.52        14.50        17.98         3.98        30.61 
TCGA-61-2009 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 
       39.85         1.18        45.96        45.40         4.80         4.77 
TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 
       51.72        71.74        61.64        58.39        60.62        65.49 
TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 
        6.48        76.83        20.68        44.52       125.72        22.22 
TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
        6.35        31.07         8.58 

  1P LOSS MUTATED 1P LOSS WILD-TYPE 
             1.74              0.26 
  1P LOSS MUTATED 1P LOSS WILD-TYPE 
           151.99            180.16 
  1P LOSS MUTATED 1P LOSS WILD-TYPE 
            30.20             27.88 
[1] "1.7 - 152.0 (30.2)" "0.3 - 180.2 (27.9)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED"   "1P LOSS MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED"   "1P LOSS MUTATED" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "1P LOSS MUTATED"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED"   "1P LOSS MUTATED" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED"   "1P LOSS MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED"   "1P LOSS MUTATED" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "1P LOSS MUTATED"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED"   "1P LOSS MUTATED" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED"   "1P LOSS MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED"   "1P LOSS MUTATED" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "1P LOSS MUTATED"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED"   "1P LOSS MUTATED" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE"   "1P LOSS MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"1P LOSS WILD-TYPE"   "1P LOSS MUTATED" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" "1P LOSS WILD-TYPE" 
[1] "hr=" "1"  
D41V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  1P LOSS MUTATED         0    61                0
  1P LOSS WILD-TYPE       2   487                2
D41V3, multiclass
                  clus
vv                 1P LOSS MUTATED 1P LOSS WILD-TYPE
  OMENTUM                        0                 2
  OVARY                         61               487
  PERITONEUM OVARY               0                 2
D41V4, continuous
D41V5, binary
                   cls
clus                  0   1
  1P LOSS MUTATED     1  61
  1P LOSS WILD-TYPE   2 498
[1] "tbl2"
                   cls
clus                [,1] [,2]
  1P LOSS MUTATED      1   61
  1P LOSS WILD-TYPE    2  498
     clus
vv    1P LOSS MUTATED 1P LOSS WILD-TYPE
  NO                1                 2
  YES              61               498
                   vv
clus                R0 R1 R2
  1P LOSS MUTATED    1  2  0
  1P LOSS WILD-TYPE 13 24  2
D41V6, multiclass
    clus
vv   1P LOSS MUTATED 1P LOSS WILD-TYPE
  R0               1                13
  R1               2                24
  R2               0                 2

Clustering(42) Variable = 1Q LOSS MUTATION ANALYSIS
D42V1, survival
                   sevent
clus2                 0   1
  1Q LOSS MUTATED    14  21
  1Q LOSS WILD-TYPE 247 265
  1Q LOSS MUTATED 1Q LOSS WILD-TYPE 
               35               512 
  1Q LOSS MUTATED 1Q LOSS WILD-TYPE 
               21               265 
$`1Q LOSS MUTATED`
TCGA-04-1349 TCGA-04-1351 TCGA-04-1362 TCGA-10-0928 TCGA-13-0761 TCGA-13-0794 
       21.57        65.46        44.32        18.48        34.06        30.35 
TCGA-13-0905 TCGA-13-1407 TCGA-13-1477 TCGA-13-1489 TCGA-13-1497 TCGA-13-2065 
       47.84         6.05        54.61        82.88        54.31         8.75 
TCGA-20-1682 TCGA-23-1022 TCGA-23-1109 TCGA-23-2643 TCGA-23-2645 TCGA-24-1103 
       27.48        42.51        51.35         4.70         4.50        54.08 
TCGA-24-1105 TCGA-24-1424 TCGA-24-1434 TCGA-24-2020 TCGA-25-1632 TCGA-25-1877 
       47.41         6.02        18.67       151.99        56.94        18.05 
TCGA-25-2408 TCGA-29-1768 TCGA-29-2429 TCGA-30-1853 TCGA-30-1859 TCGA-30-1860 
       30.97        31.23         4.87        36.26        48.07        44.91 
TCGA-36-1580 TCGA-57-1585 TCGA-59-2352 TCGA-61-1727 TCGA-61-2012 
       24.23         1.74         9.40        18.54        30.64 

$`1Q LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1350 
       18.51        11.87        65.49        63.06        48.76        63.98 
TCGA-04-1356 TCGA-04-1361 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 
       49.28        32.52        33.67        76.54        71.47        82.36 
TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 TCGA-04-1530 TCGA-04-1536 
       56.55        41.59        19.99        38.37       119.08        29.06 
TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 
       84.20        55.40        48.89        27.88        28.64        64.64 
TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 
       36.23        31.86        47.70        45.34        29.16         9.47 
TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 
       57.73        17.95        35.54         9.96        38.43        89.33 
TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 
       74.89        41.59        57.57        61.87        55.36        30.48 
TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 
       17.98         5.85         3.02         8.55        97.55         6.15 
TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 
        6.12        35.15         4.50       112.37        71.11        63.09 
TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 
       39.75        20.91        26.93        12.46        54.31        25.91 
TCGA-10-0927 TCGA-10-0930 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 
       81.47        33.24        32.28        11.70         3.88        35.41 
TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 
       35.80        15.12        19.86         6.21        24.59        44.55 
TCGA-13-0723 TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 
       39.58         2.73        12.39        31.07        15.19        17.79 
TCGA-13-0751 TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 TCGA-13-0762 
       55.17         2.47        11.18        11.38        11.54        32.25 
TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 
       31.04        21.40         8.42        38.93        36.72        28.70 
TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 TCGA-13-0802 
       19.56         8.71         7.79         8.12         8.28         8.19 
TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 
       43.82        35.28        35.28        13.61        68.91       107.18 
TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 
       91.40        74.27        66.64        70.39        61.81        67.99 
TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 
       69.01        43.36        57.47        56.15        57.07        19.36 
TCGA-13-0903 TCGA-13-0904 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 
       47.38        48.33        44.94        44.84        37.08        27.68 
TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 TCGA-13-0921 
       34.06        29.98        21.14        14.89        13.81         4.64 
TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1408 
        6.41         6.08        10.88         6.61         7.36         5.92 
TCGA-13-1409 TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 TCGA-13-1481 TCGA-13-1482 
        6.84         4.70         4.21         5.33        87.06        61.71 
TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 TCGA-13-1491 
       29.39        98.04        20.68        22.39        70.82        52.44 
TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 TCGA-13-1498 TCGA-13-1499 
       73.55        38.17        49.22         4.24        37.61        38.37 
TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 
       13.97        32.84        16.57         4.21         4.41         4.77 
TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 TCGA-13-2059 
        4.14         2.56         3.88         3.09        14.24        12.23 
TCGA-13-2060 TCGA-13-2061 TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 
        8.58        10.78         6.28        23.05        25.94        26.20 
TCGA-20-0996 TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 
       72.20        25.38        19.07        16.67         2.93         2.66 
TCGA-23-1021 TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 
       47.54        40.54        15.39        26.83        31.73        49.41 
TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1110 TCGA-23-1111 
        8.81        29.10        18.87         2.24        54.51         3.22 
TCGA-23-1113 TCGA-23-1114 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 
       31.20        68.68         4.57        33.30        86.01       129.96 
TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 
        4.27         6.38        39.09        33.47        58.13         0.53 
TCGA-23-2072 TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 
       24.95       115.89        87.48        91.66        77.00        49.84 
TCGA-23-2641 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 
        2.76         7.63        19.63        11.64        21.80        41.56 
TCGA-24-0980 TCGA-24-0982 TCGA-24-1104 TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 
        7.66        22.32        63.55         6.31         6.38         7.82 
TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1425 TCGA-24-1426 
        7.99         7.86         0.76         6.25         5.95         5.36 
TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 TCGA-24-1435 TCGA-24-1436 
        4.80        17.36        28.34        19.17        43.53         8.55 
TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 
       72.92        12.46        45.14       105.99         9.11         3.42 
TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 
        1.18        22.19        26.96        57.37        64.27        16.21 
TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 
       56.58        41.06        51.91        41.39        58.09        88.50 
TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 
       70.62        39.88        19.53        44.09        45.50        47.70 
TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 
       25.87        10.26        17.23        90.15        88.34        48.33 
TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 TCGA-24-1845 TCGA-24-1846 
       38.24         8.32         3.48         3.72         3.81         4.37 
TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 
       11.28         5.75         5.49         9.80        22.65        30.21 
TCGA-24-1927 TCGA-24-1928 TCGA-24-1930 TCGA-24-2019 TCGA-24-2023 TCGA-24-2024 
       16.41        11.05        81.11         4.87        44.84        58.16 
TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 
       34.82       109.68        14.43        53.95        18.48        28.18 
TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 TCGA-24-2262 
       64.01        44.48        57.07        36.16         0.79         0.36 
TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 
       47.54        31.63        70.45        44.58         0.82        67.36 
TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 TCGA-24-2298 TCGA-25-1312 
       36.23        16.64        33.11        55.86        53.26         1.02 
TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 
       26.93        31.99        51.06        37.02         1.02        34.98 
TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 
       65.00        36.95        33.96         2.99        12.00         2.96 
TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 TCGA-25-1630 
       18.58        18.02        15.78         0.36        20.58         7.86 
TCGA-25-1631 TCGA-25-1633 TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 
        0.30        60.59        35.54        51.22        14.93        24.99 
TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 TCGA-25-2396 
       85.05        13.02        49.05         1.02        38.04         3.02 
TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 
       12.00        45.01        19.99        42.02         2.96        29.00 
TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 TCGA-29-1693 TCGA-29-1694 
       26.96        78.87        44.71        47.18       101.75        38.53 
TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 
        0.79        33.70        31.17        68.28         0.53        16.90 
TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 
       18.64        59.67        18.25        41.95        29.23        34.62 
TCGA-29-1761 TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1769 
       17.00        85.68        66.77        62.93        39.09        22.98 
TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 TCGA-29-1776 TCGA-29-1777 
       24.36        22.52        17.29        12.36        11.84        12.30 
TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 
       14.93         8.35         7.20         5.36        34.62        86.17 
TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 TCGA-29-2431 TCGA-29-2432 TCGA-29-2434 
       65.00        62.47        45.11        42.25        11.84        11.47 
TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 
        9.76        38.07        51.91         2.47        15.68         0.26 
TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 
       34.78         6.08        36.62         1.18        57.57        24.26 
TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 
       30.05        48.79        45.57        30.18        18.77        22.45 
TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1569 
        6.71        42.51        44.09         2.17        28.73        29.06 
TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 
       21.53        22.85        22.55         8.55        30.05        25.74 
TCGA-36-1578 TCGA-36-1581 TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 
       27.85        24.69        35.05        33.01        29.49        29.79 
TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 
       25.91        25.08        23.80        21.60         2.24        20.98 
TCGA-36-2545 TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 TCGA-36-2552 
       18.31        20.52        14.17         6.05        16.14        11.47 
TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 
       26.04        23.74         9.44         7.56         7.46        22.39 
TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 TCGA-57-1586 TCGA-57-1992 
        1.48        24.03        11.38        21.14        22.32        28.96 
TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 
       25.05        25.02       180.16        80.12        22.32       116.12 
TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 
       34.39         2.14         5.39        44.78        11.11         8.05 
TCGA-61-1724 TCGA-61-1725 TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 
       20.94        31.40        27.88         4.34        31.76        28.47 
TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 
       48.79        44.84        35.80         2.43        33.67        43.69 
TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 
        1.41         8.42         5.79        11.41        13.02         9.07 
TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 
       34.13        31.30        37.02        42.48        48.92        56.58 
TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 
       67.73        43.43        15.75        38.17         1.97         5.52 
TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 TCGA-61-2009 TCGA-61-2016 
       14.50        17.98         3.98        30.61        39.85         1.18 
TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 
       45.96        45.40         4.80         4.77        51.72        71.74 
TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 
       61.64        58.39        60.62        65.49        55.50         6.48 
TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 
       76.83        20.68        44.52       125.72        22.22         6.35 
TCGA-61-2613 TCGA-61-2614 
       31.07         8.58 

  1Q LOSS MUTATED 1Q LOSS WILD-TYPE 
             1.74              0.26 
  1Q LOSS MUTATED 1Q LOSS WILD-TYPE 
           151.99            180.16 
  1Q LOSS MUTATED 1Q LOSS WILD-TYPE 
           30.970            27.865 
[1] "1.7 - 152.0 (31.0)" "0.3 - 180.2 (27.9)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED"   "1Q LOSS MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED"   "1Q LOSS MUTATED" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED"   "1Q LOSS MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED"   "1Q LOSS MUTATED" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED"   "1Q LOSS MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED"   "1Q LOSS MUTATED" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"1Q LOSS WILD-TYPE"   "1Q LOSS MUTATED" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
[1] "hr=" "1.1"
D42V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  1Q LOSS MUTATED         0    38                0
  1Q LOSS WILD-TYPE       2   510                2
D42V3, multiclass
                  clus
vv                 1Q LOSS MUTATED 1Q LOSS WILD-TYPE
  OMENTUM                        0                 2
  OVARY                         38               510
  PERITONEUM OVARY               0                 2
D42V4, continuous
D42V5, binary
                   cls
clus                  0   1
  1Q LOSS MUTATED     1  38
  1Q LOSS WILD-TYPE   2 521
[1] "tbl2"
                   cls
clus                [,1] [,2]
  1Q LOSS MUTATED      1   38
  1Q LOSS WILD-TYPE    2  521
     clus
vv    1Q LOSS MUTATED 1Q LOSS WILD-TYPE
  NO                1                 2
  YES              38               521
                   vv
clus                R0 R1 R2
  1Q LOSS MUTATED    0  1  0
  1Q LOSS WILD-TYPE 14 25  2
D42V6, multiclass
[1] "Remove cluster labels:" "1Q LOSS MUTATED"       
clus
  1Q LOSS MUTATED 1Q LOSS WILD-TYPE 
                1                41 
       TCGA-04-1516        TCGA-04-1644        TCGA-13-0807        TCGA-13-0911 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-29-2414        TCGA-29-2425        TCGA-29-2427 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-2428        TCGA-29-2431        TCGA-29-2432        TCGA-29-2434 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-29-2436        TCGA-36-2529        TCGA-36-2530        TCGA-36-2532 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-2534        TCGA-36-2537        TCGA-36-2538        TCGA-36-2540 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-2542        TCGA-36-2543        TCGA-36-2544        TCGA-36-2545 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-2547        TCGA-36-2548        TCGA-36-2549        TCGA-36-2551 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-36-2552        TCGA-42-2582        TCGA-42-2587        TCGA-42-2588 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-42-2589        TCGA-42-2590        TCGA-42-2593        TCGA-57-1993 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-59-2363        TCGA-59-2372        TCGA-61-2612        TCGA-61-2613 
"1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" "1Q LOSS WILD-TYPE" 
       TCGA-61-2614 
"1Q LOSS WILD-TYPE" 

Clustering(43) Variable = 2P LOSS MUTATION ANALYSIS
D43V1, survival
                   sevent
clus2                 0   1
  2P LOSS MUTATED    21  30
  2P LOSS WILD-TYPE 240 256
  2P LOSS MUTATED 2P LOSS WILD-TYPE 
               51               496 
  2P LOSS MUTATED 2P LOSS WILD-TYPE 
               30               256 
$`2P LOSS MUTATED`
TCGA-04-1343 TCGA-04-1349 TCGA-04-1362 TCGA-04-1514 TCGA-04-1517 TCGA-04-1536 
       11.87        21.57        44.32        56.55        19.99        29.06 
TCGA-09-1673 TCGA-13-0723 TCGA-13-0751 TCGA-13-0762 TCGA-13-0883 TCGA-13-0890 
        3.02        39.58        55.17        32.25        68.91        67.99 
TCGA-13-0891 TCGA-13-0904 TCGA-13-0916 TCGA-13-0924 TCGA-13-1411 TCGA-13-1494 
       69.01        48.33        21.14         6.08         4.21        38.17 
TCGA-20-0991 TCGA-20-1682 TCGA-23-1116 TCGA-23-2077 TCGA-24-1413 TCGA-24-1464 
       26.20        27.48         4.57       115.89         6.31        12.46 
TCGA-24-1563 TCGA-24-1614 TCGA-24-1847 TCGA-24-1923 TCGA-24-1930 TCGA-24-2020 
       47.70        48.33        11.28        22.65        81.11       151.99 
TCGA-24-2260 TCGA-24-2280 TCGA-25-1313 TCGA-25-1318 TCGA-25-1321 TCGA-25-1627 
       36.16        70.45        26.93        34.98        33.96         0.36 
TCGA-25-1878 TCGA-25-2392 TCGA-29-1688 TCGA-29-1693 TCGA-29-1699 TCGA-29-1761 
       85.05         1.02        78.87       101.75         0.53        17.00 
TCGA-29-1770 TCGA-30-1853 TCGA-36-2543 TCGA-36-2545 TCGA-61-1743 TCGA-61-2016 
       24.36        36.26         2.24        18.31        43.69         1.18 
TCGA-61-2087 TCGA-61-2092 TCGA-61-2109 
        4.80        51.72        20.68 

$`2P LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1350 TCGA-04-1351 
       18.51        65.49        63.06        48.76        63.98        65.46 
TCGA-04-1356 TCGA-04-1361 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 
       49.28        32.52        33.67        76.54        71.47        82.36 
TCGA-04-1516 TCGA-04-1525 TCGA-04-1530 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 
       41.59        38.37       119.08        84.20        55.40        48.89 
TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 
       27.88        28.64        64.64        36.23        31.86        47.70 
TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 
       45.34        29.16         9.47        57.73        17.95        35.54 
TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 
        9.96        38.43        89.33        74.89        41.59        57.57 
TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 TCGA-09-1672 TCGA-09-1674 
       61.87        55.36        30.48        17.98         5.85         8.55 
TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 
       97.55         6.15         6.12        35.15         4.50       112.37 
TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 
       71.11        63.09        39.75        20.91        26.93        12.46 
TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 
       54.31        25.91        81.47        18.48        33.24        32.28 
TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 
       11.70         3.88        35.41        35.80        15.12        19.86 
TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 
        6.21        24.59        44.55         2.73        12.39        31.07 
TCGA-13-0727 TCGA-13-0730 TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 
       15.19        17.79         2.47        11.18        11.38        11.54 
TCGA-13-0761 TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 
       34.06        31.04        21.40         8.42        38.93        36.72 
TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 
       28.70        30.35        19.56         8.71         7.79         8.12 
TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 
        8.28         8.19        43.82        35.28        35.28        13.61 
TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 
      107.18        91.40        74.27        66.64        70.39        61.81 
TCGA-13-0893 TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 
       43.36        57.47        56.15        57.07        19.36        47.38 
TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 
       47.84        44.94        44.84        37.08        27.68        34.06 
TCGA-13-0913 TCGA-13-0919 TCGA-13-0920 TCGA-13-0921 TCGA-13-0923 TCGA-13-1403 
       29.98        14.89        13.81         4.64         6.41        10.88 
TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 
        6.61         7.36         6.05         5.92         6.84         4.70 
TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 
        5.33        54.61        87.06        61.71        29.39        98.04 
TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 
       20.68        22.39        70.82        82.88        52.44        73.55 
TCGA-13-1495 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 
       49.22         4.24        54.31        37.61        38.37        13.97 
TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 
       32.84        16.57         4.21         4.41         4.77         4.14 
TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 TCGA-13-2059 TCGA-13-2060 
        2.56         3.88         3.09        14.24        12.23         8.58 
TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 TCGA-20-0996 
       10.78         8.75         6.28        23.05        25.94        72.20 
TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 
       25.38        19.07        16.67         2.93         2.66        47.54 
TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 
       42.51        40.54        15.39        26.83        31.73        49.41 
TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 
        8.81        29.10        18.87         2.24        51.35        54.51 
TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 
        3.22        31.20        68.68        33.30        86.01       129.96 
TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 
        4.27         6.38        39.09        33.47        58.13         0.53 
TCGA-23-2072 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 
       24.95        87.48        91.66        77.00        49.84         2.76 
TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 
        4.70         4.50         7.63        19.63        11.64        21.80 
TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 
       41.56         7.66        22.32        54.08        63.55        47.41 
TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 
        6.38         7.82         7.99         7.86         0.76         6.25 
TCGA-24-1424 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 
        6.02         5.95         5.36         4.80        17.36        28.34 
TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 TCGA-24-1466 
       19.17        18.67        43.53         8.55        72.92        45.14 
TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 
      105.99         9.11         3.42         1.18        22.19        26.96 
TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 
       57.37        64.27        16.21        56.58        41.06        51.91 
TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 
       41.39        58.09        88.50        70.62        39.88        19.53 
TCGA-24-1560 TCGA-24-1562 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 
       44.09        45.50        25.87        10.26        17.23        90.15 
TCGA-24-1604 TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 TCGA-24-1845 
       88.34        38.24         8.32         3.48         3.72         3.81 
TCGA-24-1846 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1924 TCGA-24-1927 
        4.37         5.75         5.49         9.80        30.21        16.41 
TCGA-24-1928 TCGA-24-2019 TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 
       11.05         4.87        44.84        58.16        34.82       109.68 
TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 
       14.43        53.95        18.48        28.18        64.01        44.48 
TCGA-24-2254 TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2281 
       57.07         0.79         0.36        47.54        31.63        44.58 
TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 
        0.82        67.36        36.23        16.64        33.11        55.86 
TCGA-24-2298 TCGA-25-1312 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 
       53.26         1.02        31.99        51.06        37.02         1.02 
TCGA-25-1319 TCGA-25-1320 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 
       65.00        36.95         2.99        12.00         2.96        18.58 
TCGA-25-1625 TCGA-25-1626 TCGA-25-1628 TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 
       18.02        15.78        20.58         7.86         0.30        56.94 
TCGA-25-1633 TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 
       60.59        35.54        51.22        14.93        24.99        18.05 
TCGA-25-2042 TCGA-25-2391 TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 
       13.02        49.05        38.04         3.02        12.00        45.01 
TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 
       19.99        42.02         2.96        29.00        30.97        26.96 
TCGA-29-1690 TCGA-29-1691 TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 
       44.71        47.18        38.53         0.79        33.70        31.17 
TCGA-29-1698 TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 
       68.28        16.90        18.64        59.67        18.25        41.95 
TCGA-29-1710 TCGA-29-1711 TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 
       29.23        34.62        85.68        66.77        62.93        39.09 
TCGA-29-1768 TCGA-29-1769 TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 TCGA-29-1776 
       31.23        22.98        22.52        17.29        12.36        11.84 
TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 
       12.30        14.93         8.35         7.20         5.36        34.62 
TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 
       86.17        65.00        62.47        45.11         4.87        42.25 
TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 TCGA-30-1855 
       11.84        11.47         9.76        38.07        51.91         2.47 
TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 TCGA-30-1861 TCGA-30-1862 
       15.68         0.26        48.07        44.91        34.78         6.08 
TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 
       36.62         1.18        57.57        24.26        30.05        48.79 
TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 
       45.57        30.18        18.77        22.45         6.71        42.51 
TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 
       44.09         2.17        28.73        29.06        21.53        22.85 
TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 
       22.55         8.55        30.05        25.74        27.85        24.23 
TCGA-36-1581 TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 
       24.69        35.05        33.01        29.49        29.79        25.91 
TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2544 TCGA-36-2547 TCGA-36-2548 
       25.08        23.80        21.60        20.98        20.52        14.17 
TCGA-36-2549 TCGA-36-2551 TCGA-36-2552 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 
        6.05        16.14        11.47        26.04        23.74         9.44 
TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 
        7.56         7.46        22.39         1.48        24.03        11.38 
TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 
       21.14         1.74        22.32        28.96        25.05        25.02 
TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 TCGA-59-2354 
      180.16        80.12        22.32       116.12         9.40        34.39 
TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 
        2.14         5.39        44.78        11.11         8.05        20.94 
TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 
       31.40        18.54        27.88         4.34        31.76        28.47 
TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1895 
       48.79        44.84        35.80         2.43        33.67         1.41 
TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 
        8.42         5.79        11.41        13.02         9.07        34.13 
TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 
       31.30        37.02        42.48        48.92        56.58        67.73 
TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 
       43.43        15.75        38.17         1.97         5.52        14.50 
TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 TCGA-61-2017 
       17.98         3.98        30.61        39.85        30.64        45.96 
TCGA-61-2018 TCGA-61-2088 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 
       45.40         4.77        71.74        61.64        58.39        60.62 
TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2110 TCGA-61-2111 
       65.49        55.50         6.48        76.83        44.52       125.72 
TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
       22.22         6.35        31.07         8.58 

  2P LOSS MUTATED 2P LOSS WILD-TYPE 
             0.36              0.26 
  2P LOSS MUTATED 2P LOSS WILD-TYPE 
           151.99            180.16 
  2P LOSS MUTATED 2P LOSS WILD-TYPE 
            29.06             28.03 
[1] "0.4 - 152.0 (29.1)" "0.3 - 180.2 (28.0)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"2P LOSS WILD-TYPE"   "2P LOSS MUTATED" "2P LOSS WILD-TYPE"   "2P LOSS MUTATED" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "2P LOSS MUTATED" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
[1] "hr=" "1.1"
D43V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  2P LOSS MUTATED         0    52                0
  2P LOSS WILD-TYPE       2   496                2
D43V3, multiclass
                  clus
vv                 2P LOSS MUTATED 2P LOSS WILD-TYPE
  OMENTUM                        0                 2
  OVARY                         52               496
  PERITONEUM OVARY               0                 2
D43V4, continuous
D43V5, binary
                   cls
clus                  0   1
  2P LOSS MUTATED     0  52
  2P LOSS WILD-TYPE   3 507
[1] "tbl2"
                   cls
clus                [,1] [,2]
  2P LOSS MUTATED      0   52
  2P LOSS WILD-TYPE    3  507
     clus
vv    2P LOSS MUTATED 2P LOSS WILD-TYPE
  NO                0                 3
  YES              52               507
                   vv
clus                R0 R1 R2
  2P LOSS MUTATED    1  1  0
  2P LOSS WILD-TYPE 13 25  2
D43V6, multiclass
[1] "Remove cluster labels:" "2P LOSS MUTATED"       
clus
  2P LOSS MUTATED 2P LOSS WILD-TYPE 
                2                40 
       TCGA-04-1516        TCGA-04-1644        TCGA-13-0807        TCGA-13-0911 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-29-2414        TCGA-29-2425        TCGA-29-2427 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-2428        TCGA-29-2429        TCGA-29-2431        TCGA-29-2432 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-29-2434        TCGA-29-2436        TCGA-36-2529        TCGA-36-2530 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-36-2532        TCGA-36-2534        TCGA-36-2537        TCGA-36-2538 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-36-2540        TCGA-36-2542        TCGA-36-2544        TCGA-36-2547 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-36-2548        TCGA-36-2549        TCGA-36-2551        TCGA-36-2552 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-42-2582        TCGA-42-2587        TCGA-42-2588        TCGA-42-2589 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-42-2590        TCGA-42-2593        TCGA-57-1993        TCGA-59-2363 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 
       TCGA-59-2372        TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" "2P LOSS WILD-TYPE" 

Clustering(44) Variable = 2Q LOSS MUTATION ANALYSIS
D44V1, survival
                   sevent
clus2                 0   1
  2Q LOSS MUTATED    26  31
  2Q LOSS WILD-TYPE 235 255
  2Q LOSS MUTATED 2Q LOSS WILD-TYPE 
               57               490 
  2Q LOSS MUTATED 2Q LOSS WILD-TYPE 
               31               255 
$`2Q LOSS MUTATED`
TCGA-04-1336 TCGA-04-1342 TCGA-04-1349 TCGA-04-1514 TCGA-04-1517 TCGA-09-0369 
       49.15        18.51        21.57        56.55        19.99        35.54 
TCGA-09-1673 TCGA-13-0723 TCGA-13-0751 TCGA-13-0762 TCGA-13-0890 TCGA-13-0891 
        3.02        39.58        55.17        32.25        67.99        69.01 
TCGA-13-0904 TCGA-13-0916 TCGA-13-0924 TCGA-13-1411 TCGA-13-1494 TCGA-20-0991 
       48.33        21.14         6.08         4.21        38.17        26.20 
TCGA-20-1682 TCGA-20-1686 TCGA-23-1116 TCGA-23-2077 TCGA-24-1413 TCGA-24-1464 
       27.48         2.93         4.57       115.89         6.31        12.46 
TCGA-24-1563 TCGA-24-1614 TCGA-24-1847 TCGA-24-1923 TCGA-24-1930 TCGA-24-2020 
       47.70        48.33        11.28        22.65        81.11       151.99 
TCGA-24-2029 TCGA-24-2260 TCGA-24-2280 TCGA-25-1313 TCGA-25-1318 TCGA-25-1627 
       14.43        36.16        70.45        26.93        34.98         0.36 
TCGA-25-1635 TCGA-25-2392 TCGA-25-2409 TCGA-29-1688 TCGA-29-1693 TCGA-29-1699 
       51.22         1.02        26.96        78.87       101.75         0.53 
TCGA-29-1701 TCGA-29-1702 TCGA-29-1761 TCGA-29-1770 TCGA-29-1774 TCGA-30-1853 
       16.90        18.64        17.00        24.36        17.29        36.26 
TCGA-30-1887 TCGA-36-1575 TCGA-36-2529 TCGA-36-2543 TCGA-36-2545 TCGA-61-2016 
       24.26         8.55        35.05         2.24        18.31         1.18 
TCGA-61-2087 TCGA-61-2092 TCGA-61-2109 
        4.80        51.72        20.68 

$`2Q LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1337 TCGA-04-1338 TCGA-04-1343 
       40.24        41.00         1.81         2.01        46.62        11.87 
TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 
       65.49        63.06        48.76        63.98        65.46        49.28 
TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 
       32.52        44.32        33.67        76.54        71.47        82.36 
TCGA-04-1516 TCGA-04-1525 TCGA-04-1530 TCGA-04-1536 TCGA-04-1542 TCGA-04-1638 
       41.59        38.37       119.08        29.06        84.20        55.40 
TCGA-04-1644 TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 
       48.89        27.88        28.64        64.64        36.23        31.86 
TCGA-04-1654 TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 
       47.70        45.34        29.16         9.47        57.73        17.95 
TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 
        9.96        38.43        89.33        74.89        41.59        57.57 
TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 TCGA-09-1672 TCGA-09-1674 
       61.87        55.36        30.48        17.98         5.85         8.55 
TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 
       97.55         6.15         6.12        35.15         4.50       112.37 
TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 
       71.11        63.09        39.75        20.91        26.93        12.46 
TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 
       54.31        25.91        81.47        18.48        33.24        32.28 
TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 
       11.70         3.88        35.41        35.80        15.12        19.86 
TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 
        6.21        24.59        44.55         2.73        12.39        31.07 
TCGA-13-0727 TCGA-13-0730 TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 
       15.19        17.79         2.47        11.18        11.38        11.54 
TCGA-13-0761 TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 
       34.06        31.04        21.40         8.42        38.93        36.72 
TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 
       28.70        30.35        19.56         8.71         7.79         8.12 
TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 
        8.28         8.19        43.82        35.28        35.28        13.61 
TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 
       68.91       107.18        91.40        74.27        66.64        70.39 
TCGA-13-0889 TCGA-13-0893 TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 
       61.81        43.36        57.47        56.15        57.07        19.36 
TCGA-13-0903 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 
       47.38        47.84        44.94        44.84        37.08        27.68 
TCGA-13-0912 TCGA-13-0913 TCGA-13-0919 TCGA-13-0920 TCGA-13-0921 TCGA-13-0923 
       34.06        29.98        14.89        13.81         4.64         6.41 
TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 
       10.88         6.61         7.36         6.05         5.92         6.84 
TCGA-13-1410 TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 
        4.70         5.33        54.61        87.06        61.71        29.39 
TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 
       98.04        20.68        22.39        70.82        82.88        52.44 
TCGA-13-1492 TCGA-13-1495 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 
       73.55        49.22         4.24        54.31        37.61        38.37 
TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 
       13.97        32.84        16.57         4.21         4.41         4.77 
TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 TCGA-13-2059 
        4.14         2.56         3.88         3.09        14.24        12.23 
TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 
        8.58        10.78         8.75         6.28        23.05        25.94 
TCGA-20-0996 TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-20-1687 TCGA-23-1021 
       72.20        25.38        19.07        16.67         2.66        47.54 
TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 
       42.51        40.54        15.39        26.83        31.73        49.41 
TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 
        8.81        29.10        18.87         2.24        51.35        54.51 
TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 
        3.22        31.20        68.68        33.30        86.01       129.96 
TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 
        4.27         6.38        39.09        33.47        58.13         0.53 
TCGA-23-2072 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 
       24.95        87.48        91.66        77.00        49.84         2.76 
TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 
        4.70         4.50         7.63        19.63        11.64        21.80 
TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 
       41.56         7.66        22.32        54.08        63.55        47.41 
TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 
        6.38         7.82         7.99         7.86         0.76         6.25 
TCGA-24-1424 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 
        6.02         5.95         5.36         4.80        17.36        28.34 
TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 TCGA-24-1466 
       19.17        18.67        43.53         8.55        72.92        45.14 
TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 
      105.99         9.11         3.42         1.18        22.19        26.96 
TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 
       57.37        64.27        16.21        56.58        41.06        51.91 
TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 
       41.39        58.09        88.50        70.62        39.88        19.53 
TCGA-24-1560 TCGA-24-1562 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 
       44.09        45.50        25.87        10.26        17.23        90.15 
TCGA-24-1604 TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 TCGA-24-1845 
       88.34        38.24         8.32         3.48         3.72         3.81 
TCGA-24-1846 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1924 TCGA-24-1927 
        4.37         5.75         5.49         9.80        30.21        16.41 
TCGA-24-1928 TCGA-24-2019 TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 
       11.05         4.87        44.84        58.16        34.82       109.68 
TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 
       53.95        18.48        28.18        64.01        44.48        57.07 
TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2281 TCGA-24-2288 
        0.79         0.36        47.54        31.63        44.58         0.82 
TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 TCGA-24-2298 
       67.36        36.23        16.64        33.11        55.86        53.26 
TCGA-25-1312 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 TCGA-25-1319 
        1.02        31.99        51.06        37.02         1.02        65.00 
TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 
       36.95        33.96         2.99        12.00         2.96        18.58 
TCGA-25-1625 TCGA-25-1626 TCGA-25-1628 TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 
       18.02        15.78        20.58         7.86         0.30        56.94 
TCGA-25-1633 TCGA-25-1634 TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 TCGA-25-1878 
       60.59        35.54        14.93        24.99        18.05        85.05 
TCGA-25-2042 TCGA-25-2391 TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 
       13.02        49.05        38.04         3.02        12.00        45.01 
TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-29-1690 
       19.99        42.02         2.96        29.00        30.97        44.71 
TCGA-29-1691 TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 
       47.18        38.53         0.79        33.70        31.17        68.28 
TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 TCGA-29-1762 
       59.67        18.25        41.95        29.23        34.62        85.68 
TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 TCGA-29-1771 
       66.77        62.93        39.09        31.23        22.98        22.52 
TCGA-29-1775 TCGA-29-1776 TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 
       12.36        11.84        12.30        14.93         8.35         7.20 
TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 
        5.36        34.62        86.17        65.00        62.47        45.11 
TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 
        4.87        42.25        11.84        11.47         9.76        38.07 
TCGA-30-1718 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 
       51.91         2.47        15.68         0.26        48.07        44.91 
TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1891 
       34.78         6.08        36.62         1.18        57.57        30.05 
TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 
       48.79        45.57        30.18        18.77        22.45         6.71 
TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 
       42.51        44.09         2.17        28.73        29.06        21.53 
TCGA-36-1571 TCGA-36-1574 TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 
       22.85        22.55        30.05        25.74        27.85        24.23 
TCGA-36-1581 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 
       24.69        33.01        29.49        29.79        25.91        25.08 
TCGA-36-2540 TCGA-36-2542 TCGA-36-2544 TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 
       23.80        21.60        20.98        20.52        14.17         6.05 
TCGA-36-2551 TCGA-36-2552 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 TCGA-42-2589 
       16.14        11.47        26.04        23.74         9.44         7.56 
TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 
        7.46        22.39         1.48        24.03        11.38        21.14 
TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 
        1.74        22.32        28.96        25.05        25.02       180.16 
TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 
       80.12        22.32       116.12         9.40        34.39         2.14 
TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 
        5.39        44.78        11.11         8.05        20.94        31.40 
TCGA-61-1727 TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 
       18.54        27.88         4.34        31.76        28.47        48.79 
TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 
       44.84        35.80         2.43        33.67        43.69         1.41 
TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 
        8.42         5.79        11.41        13.02         9.07        34.13 
TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 
       31.30        37.02        42.48        48.92        56.58        67.73 
TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 
       43.43        15.75        38.17         1.97         5.52        14.50 
TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 TCGA-61-2017 
       17.98         3.98        30.61        39.85        30.64        45.96 
TCGA-61-2018 TCGA-61-2088 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 
       45.40         4.77        71.74        61.64        58.39        60.62 
TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2110 TCGA-61-2111 
       65.49        55.50         6.48        76.83        44.52       125.72 
TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
       22.22         6.35        31.07         8.58 

  2Q LOSS MUTATED 2Q LOSS WILD-TYPE 
             0.36              0.26 
  2Q LOSS MUTATED 2Q LOSS WILD-TYPE 
           151.99            180.16 
  2Q LOSS MUTATED 2Q LOSS WILD-TYPE 
           24.360            28.715 
[1] "0.4 - 152.0 (24.4)" "0.3 - 180.2 (28.7)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED"   "2Q LOSS MUTATED"   "2Q LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED"   "2Q LOSS MUTATED"   "2Q LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED"   "2Q LOSS MUTATED"   "2Q LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE"   "2Q LOSS MUTATED" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "2Q LOSS MUTATED" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" "2Q LOSS WILD-TYPE" 
[1] "hr=" "1"  
D44V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  2Q LOSS MUTATED         0    57                1
  2Q LOSS WILD-TYPE       2   491                1
D44V3, multiclass
                  clus
vv                 2Q LOSS MUTATED 2Q LOSS WILD-TYPE
  OMENTUM                        0                 2
  OVARY                         57               491
  PERITONEUM OVARY               1                 1
D44V4, continuous
D44V5, binary
                   cls
clus                  0   1
  2Q LOSS MUTATED     0  59
  2Q LOSS WILD-TYPE   3 500
[1] "tbl2"
                   cls
clus                [,1] [,2]
  2Q LOSS MUTATED      0   59
  2Q LOSS WILD-TYPE    3  500
     clus
vv    2Q LOSS MUTATED 2Q LOSS WILD-TYPE
  NO                0                 3
  YES              59               500
                   vv
clus                R0 R1 R2
  2Q LOSS MUTATED    1  2  0
  2Q LOSS WILD-TYPE 13 24  2
D44V6, multiclass
    clus
vv   2Q LOSS MUTATED 2Q LOSS WILD-TYPE
  R0               1                13
  R1               2                24
  R2               0                 2

Clustering(45) Variable = 3P LOSS MUTATION ANALYSIS
D45V1, survival
                   sevent
clus2                 0   1
  3P LOSS MUTATED    45  50
  3P LOSS WILD-TYPE 216 236
  3P LOSS MUTATED 3P LOSS WILD-TYPE 
               95               452 
  3P LOSS MUTATED 3P LOSS WILD-TYPE 
               50               236 
$`3P LOSS MUTATED`
TCGA-04-1346 TCGA-04-1347 TCGA-04-1351 TCGA-04-1356 TCGA-04-1365 TCGA-04-1514 
       65.49        63.06        65.46        49.28        76.54        56.55 
TCGA-04-1525 TCGA-04-1530 TCGA-04-1542 TCGA-04-1652 TCGA-09-0365 TCGA-09-0369 
       38.37       119.08        84.20        31.86         9.47        35.54 
TCGA-09-1667 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 TCGA-10-0938 TCGA-13-0730 
       61.87        71.11        63.09        39.75        19.86        17.79 
TCGA-13-0757 TCGA-13-0792 TCGA-13-0794 TCGA-13-0888 TCGA-13-0890 TCGA-13-0905 
       11.18        36.72        30.35        70.39        67.99        47.84 
TCGA-13-0920 TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 TCGA-13-1411 TCGA-13-1487 
       13.81         6.05         5.92         6.84         4.21        22.39 
TCGA-13-1492 TCGA-13-1499 TCGA-13-1512 TCGA-13-2057 TCGA-20-0990 TCGA-23-1024 
       73.55        38.37         3.09        14.24        25.94        15.39 
TCGA-23-1031 TCGA-23-1032 TCGA-23-1114 TCGA-24-0968 TCGA-24-0970 TCGA-24-1417 
       18.87         2.24        68.68        19.63        11.64         7.82 
TCGA-24-1418 TCGA-24-1464 TCGA-24-1469 TCGA-24-1545 TCGA-24-1548 TCGA-24-1550 
        7.99        12.46         9.11        57.37        16.21        41.06 
TCGA-24-1846 TCGA-24-1930 TCGA-24-2026 TCGA-24-2027 TCGA-24-2288 TCGA-24-2293 
        4.37        81.11        34.82       109.68         0.82        16.64 
TCGA-25-1312 TCGA-25-1317 TCGA-25-1320 TCGA-25-1323 TCGA-25-1627 TCGA-25-1633 
        1.02         1.02        36.95        12.00         0.36        60.59 
TCGA-25-1870 TCGA-25-2392 TCGA-25-2397 TCGA-29-1691 TCGA-29-1693 TCGA-29-1699 
       14.93         1.02        12.00        47.18       101.75         0.53 
TCGA-29-1763 TCGA-29-1764 TCGA-29-1777 TCGA-30-1853 TCGA-30-1855 TCGA-30-1887 
       66.77        62.93        12.30        36.26         2.47        24.26 
TCGA-31-1959 TCGA-36-1575 TCGA-36-1576 TCGA-36-1580 TCGA-36-2530 TCGA-36-2552 
        2.17         8.55        30.05        24.23        33.01        11.47 
TCGA-42-2589 TCGA-42-2593 TCGA-57-1992 TCGA-59-2363 TCGA-61-1722 TCGA-61-1730 
        7.56         1.48        28.96         5.39         8.05         4.34 
TCGA-61-1733 TCGA-61-1741 TCGA-61-1743 TCGA-61-1914 TCGA-61-1917 TCGA-61-1919 
       31.76        33.67        43.69        56.58        43.43        38.17 
TCGA-61-2012 TCGA-61-2016 TCGA-61-2102 TCGA-61-2104 TCGA-61-2113 
       30.64         1.18         6.48        76.83        22.22 

$`3P LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1343 TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 TCGA-04-1361 
       18.51        11.87        48.76        21.57        63.98        32.52 
TCGA-04-1362 TCGA-04-1364 TCGA-04-1367 TCGA-04-1371 TCGA-04-1516 TCGA-04-1517 
       44.32        33.67        71.47        82.36        41.59        19.99 
TCGA-04-1536 TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 
       29.06        55.40        48.89        27.88        28.64        64.64 
TCGA-04-1651 TCGA-04-1654 TCGA-04-1655 TCGA-09-0364 TCGA-09-0366 TCGA-09-0367 
       36.23        47.70        45.34        29.16        57.73        17.95 
TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 
        9.96        38.43        89.33        74.89        41.59        57.57 
TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 
       55.36        30.48        17.98         5.85         3.02         8.55 
TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 
       97.55         6.15         6.12        35.15         4.50       112.37 
TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 
       20.91        26.93        12.46        54.31        25.91        81.47 
TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 
       18.48        33.24        32.28        11.70         3.88        35.41 
TCGA-10-0936 TCGA-10-0937 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 
       35.80        15.12         6.21        24.59        44.55        39.58 
TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0751 TCGA-13-0755 
        2.73        12.39        31.07        15.19        55.17         2.47 
TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 TCGA-13-0762 TCGA-13-0764 TCGA-13-0766 
       11.38        11.54        34.06        32.25        31.04        21.40 
TCGA-13-0768 TCGA-13-0791 TCGA-13-0793 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 
        8.42        38.93        28.70        19.56         8.71         7.79 
TCGA-13-0800 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 
        8.12         8.28         8.19        43.82        35.28        35.28 
TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 
       13.61        68.91       107.18        91.40        74.27        66.64 
TCGA-13-0889 TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 
       61.81        69.01        43.36        57.47        56.15        57.07 
TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 
       19.36        47.38        48.33        44.94        44.84        37.08 
TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0921 
       27.68        34.06        29.98        21.14        14.89         4.64 
TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1410 
        6.41         6.08        10.88         6.61         7.36         4.70 
TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 
        5.33        54.61        87.06        61.71        29.39        98.04 
TCGA-13-1485 TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 TCGA-13-1494 TCGA-13-1495 
       20.68        70.82        82.88        52.44        38.17        49.22 
TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 
        4.24        54.31        37.61        13.97        32.84        16.57 
TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 
        4.21         4.41         4.77         4.14         2.56         3.88 
TCGA-13-2059 TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 
       12.23         8.58        10.78         8.75         6.28        23.05 
TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 
       26.20        72.20        27.48        25.38        19.07        16.67 
TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 TCGA-23-1022 TCGA-23-1023 TCGA-23-1026 
        2.93         2.66        47.54        42.51        40.54        26.83 
TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 TCGA-23-1109 TCGA-23-1110 
       31.73        49.41         8.81        29.10        51.35        54.51 
TCGA-23-1111 TCGA-23-1113 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 
        3.22        31.20         4.57        33.30        86.01       129.96 
TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 
        4.27         6.38        39.09        33.47        58.13         0.53 
TCGA-23-2072 TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 
       24.95       115.89        87.48        91.66        77.00        49.84 
TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0975 TCGA-24-0979 
        2.76         4.70         4.50         7.63        21.80        41.56 
TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 
        7.66        22.32        54.08        63.55        47.41         6.31 
TCGA-24-1416 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 
        6.38         7.86         0.76         6.25         6.02         5.95 
TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 
        5.36         4.80        17.36        28.34        19.17        18.67 
TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 TCGA-24-1466 TCGA-24-1467 TCGA-24-1470 
       43.53         8.55        72.92        45.14       105.99         3.42 
TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 TCGA-24-1546 TCGA-24-1549 TCGA-24-1551 
        1.18        22.19        26.96        64.27        56.58        51.91 
TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 
       41.39        58.09        88.50        70.62        39.88        19.53 
TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 
       44.09        45.50        47.70        25.87        10.26        17.23 
TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 
       90.15        88.34        48.33        38.24         8.32         3.48 
TCGA-24-1844 TCGA-24-1845 TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 
        3.72         3.81        11.28         5.75         5.49         9.80 
TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 TCGA-24-2019 TCGA-24-2020 
       22.65        30.21        16.41        11.05         4.87       151.99 
TCGA-24-2023 TCGA-24-2024 TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 
       44.84        58.16        14.43        53.95        18.48        28.18 
TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 TCGA-24-2262 
       64.01        44.48        57.07        36.16         0.79         0.36 
TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2289 TCGA-24-2290 
       47.54        31.63        70.45        44.58        67.36        36.23 
TCGA-24-2295 TCGA-24-2297 TCGA-24-2298 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 
       33.11        55.86        53.26        26.93        31.99        51.06 
TCGA-25-1316 TCGA-25-1318 TCGA-25-1319 TCGA-25-1321 TCGA-25-1322 TCGA-25-1329 
       37.02        34.98        65.00        33.96         2.99         2.96 
TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1628 TCGA-25-1630 TCGA-25-1631 
       18.58        18.02        15.78        20.58         7.86         0.30 
TCGA-25-1632 TCGA-25-1634 TCGA-25-1635 TCGA-25-1871 TCGA-25-1877 TCGA-25-1878 
       56.94        35.54        51.22        24.99        18.05        85.05 
TCGA-25-2042 TCGA-25-2391 TCGA-25-2393 TCGA-25-2396 TCGA-25-2398 TCGA-25-2399 
       13.02        49.05        38.04         3.02        45.01        19.99 
TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 
       42.02         2.96        29.00        30.97        26.96        78.87 
TCGA-29-1690 TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 
       44.71        38.53         0.79        33.70        31.17        68.28 
TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 
       16.90        18.64        59.67        18.25        41.95        29.23 
TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 
       34.62        17.00        85.68        39.09        31.23        22.98 
TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 TCGA-29-1776 TCGA-29-1778 
       24.36        22.52        17.29        12.36        11.84        14.93 
TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 
        8.35         7.20         5.36        34.62        86.17        65.00 
TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 TCGA-29-2434 
       62.47        45.11         4.87        42.25        11.84        11.47 
TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 
        9.76        38.07        51.91        15.68         0.26        48.07 
TCGA-30-1860 TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 
       44.91        34.78         6.08        36.62         1.18        57.57 
TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 
       30.05        48.79        45.57        30.18        18.77        22.45 
TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 
        6.71        42.51        44.09        28.73        29.06        21.53 
TCGA-36-1571 TCGA-36-1574 TCGA-36-1577 TCGA-36-1578 TCGA-36-1581 TCGA-36-2529 
       22.85        22.55        25.74        27.85        24.69        35.05 
TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 
       29.49        29.79        25.91        25.08        23.80        21.60 
TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 
        2.24        20.98        18.31        20.52        14.17         6.05 
TCGA-36-2551 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 TCGA-42-2590 TCGA-42-2591 
       16.14        26.04        23.74         9.44         7.46        22.39 
TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 TCGA-57-1993 
       24.03        11.38        21.14         1.74        22.32        25.05 
TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 
       25.02       180.16        80.12        22.32       116.12         9.40 
TCGA-59-2354 TCGA-59-2355 TCGA-59-2372 TCGA-61-1721 TCGA-61-1724 TCGA-61-1725 
       34.39         2.14        44.78        11.11        20.94        31.40 
TCGA-61-1727 TCGA-61-1728 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 
       18.54        27.88        28.47        48.79        44.84        35.80 
TCGA-61-1740 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 
        2.43         1.41         8.42         5.79        11.41        13.02 
TCGA-61-1904 TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 
        9.07        34.13        31.30        37.02        42.48        48.92 
TCGA-61-1915 TCGA-61-1918 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 
       67.73        15.75         1.97         5.52        14.50        17.98 
TCGA-61-2003 TCGA-61-2008 TCGA-61-2009 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 
        3.98        30.61        39.85        45.96        45.40         4.80 
TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 
        4.77        51.72        71.74        61.64        58.39        60.62 
TCGA-61-2098 TCGA-61-2101 TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 TCGA-61-2612 
       65.49        55.50        20.68        44.52       125.72         6.35 
TCGA-61-2613 TCGA-61-2614 
       31.07         8.58 

  3P LOSS MUTATED 3P LOSS WILD-TYPE 
             0.36              0.26 
  3P LOSS MUTATED 3P LOSS WILD-TYPE 
           119.08            180.16 
  3P LOSS MUTATED 3P LOSS WILD-TYPE 
           24.260            28.405 
[1] "0.4 - 119.1 (24.3)" "0.3 - 180.2 (28.4)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED"   "3P LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "3P LOSS MUTATED"   "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED"   "3P LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "3P LOSS MUTATED"   "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED"   "3P LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "3P LOSS MUTATED"   "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
  "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" "3P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED"   "3P LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE"   "3P LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" "3P LOSS WILD-TYPE" 
[1] "hr=" "1"  
D45V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  3P LOSS MUTATED         1    96                0
  3P LOSS WILD-TYPE       1   452                2
D45V3, multiclass
                  clus
vv                 3P LOSS MUTATED 3P LOSS WILD-TYPE
  OMENTUM                        1                 1
  OVARY                         96               452
  PERITONEUM OVARY               0                 2
D45V4, continuous
D45V5, binary
                   cls
clus                  0   1
  3P LOSS MUTATED     1  97
  3P LOSS WILD-TYPE   2 462
[1] "tbl2"
                   cls
clus                [,1] [,2]
  3P LOSS MUTATED      1   97
  3P LOSS WILD-TYPE    2  462
     clus
vv    3P LOSS MUTATED 3P LOSS WILD-TYPE
  NO                1                 2
  YES              97               462
                   vv
clus                R0 R1 R2
  3P LOSS MUTATED    3  1  1
  3P LOSS WILD-TYPE 11 25  1
D45V6, multiclass
    clus
vv   3P LOSS MUTATED 3P LOSS WILD-TYPE
  R0               3                11
  R1               1                25
  R2               1                 1

Clustering(46) Variable = 3Q LOSS MUTATION ANALYSIS
D46V1, survival
                   sevent
clus2                 0   1
  3Q LOSS MUTATED    21  22
  3Q LOSS WILD-TYPE 240 264
  3Q LOSS MUTATED 3Q LOSS WILD-TYPE 
               43               504 
  3Q LOSS MUTATED 3Q LOSS WILD-TYPE 
               22               264 
$`3Q LOSS MUTATED`
TCGA-04-1351 TCGA-04-1356 TCGA-04-1514 TCGA-04-1652 TCGA-09-0369 TCGA-09-2050 
       65.46        49.28        56.55        31.86        35.54        71.11 
TCGA-10-0938 TCGA-13-0730 TCGA-13-0762 TCGA-13-0794 TCGA-13-0890 TCGA-13-0905 
       19.86        17.79        32.25        30.35        67.99        47.84 
TCGA-13-1407 TCGA-13-1408 TCGA-13-1492 TCGA-13-1512 TCGA-23-1024 TCGA-23-1032 
        6.05         5.92        73.55         3.09        15.39         2.24 
TCGA-24-1418 TCGA-24-1469 TCGA-24-1545 TCGA-24-1550 TCGA-24-1846 TCGA-24-2027 
        7.99         9.11        57.37        41.06         4.37       109.68 
TCGA-24-2288 TCGA-24-2293 TCGA-25-1320 TCGA-25-2392 TCGA-25-2397 TCGA-29-1691 
        0.82        16.64        36.95         1.02        12.00        47.18 
TCGA-29-1699 TCGA-29-1763 TCGA-29-1777 TCGA-30-1853 TCGA-30-1855 TCGA-31-1959 
        0.53        66.77        12.30        36.26         2.47         2.17 
TCGA-36-1575 TCGA-42-2589 TCGA-57-1992 TCGA-61-1730 TCGA-61-1741 TCGA-61-1743 
        8.55         7.56        28.96         4.34        33.67        43.69 
TCGA-61-2012 
       30.64 

$`3Q LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 
       18.51        11.87        65.49        63.06        48.76        21.57 
TCGA-04-1350 TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 
       63.98        32.52        44.32        33.67        76.54        71.47 
TCGA-04-1371 TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 TCGA-04-1530 TCGA-04-1536 
       82.36        41.59        19.99        38.37       119.08        29.06 
TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 
       84.20        55.40        48.89        27.88        28.64        64.64 
TCGA-04-1651 TCGA-04-1654 TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 
       36.23        47.70        45.34        29.16         9.47        57.73 
TCGA-09-0367 TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 
       17.95         9.96        38.43        89.33        74.89        41.59 
TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 TCGA-09-1672 
       57.57        61.87        55.36        30.48        17.98         5.85 
TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 
        3.02         8.55        97.55         6.15         6.12        35.15 
TCGA-09-2048 TCGA-09-2049 TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 
        4.50       112.37        63.09        39.75        20.91        26.93 
TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 
       12.46        54.31        25.91        81.47        18.48        33.24 
TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 
       32.28        11.70         3.88        35.41        35.80        15.12 
TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 TCGA-13-0725 
        6.21        24.59        44.55        39.58         2.73        12.39 
TCGA-13-0726 TCGA-13-0727 TCGA-13-0751 TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 
       31.07        15.19        55.17         2.47        11.18        11.38 
TCGA-13-0760 TCGA-13-0761 TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 
       11.54        34.06        31.04        21.40         8.42        38.93 
TCGA-13-0792 TCGA-13-0793 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 
       36.72        28.70        19.56         8.71         7.79         8.12 
TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 
        8.28         8.19        43.82        35.28        35.28        13.61 
TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 
       68.91       107.18        91.40        74.27        66.64        70.39 
TCGA-13-0889 TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 
       61.81        69.01        43.36        57.47        56.15        57.07 
TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 
       19.36        47.38        48.33        44.94        44.84        37.08 
TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 
       27.68        34.06        29.98        21.14        14.89        13.81 
TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 
        4.64         6.41         6.08        10.88         6.61         7.36 
TCGA-13-1409 TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 
        6.84         4.70         4.21         5.33        54.61        87.06 
TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 
       61.71        29.39        98.04        20.68        22.39        70.82 
TCGA-13-1489 TCGA-13-1491 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 TCGA-13-1497 
       82.88        52.44        38.17        49.22         4.24        54.31 
TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 
       37.61        38.37        13.97        32.84        16.57         4.21 
TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-2057 
        4.41         4.77         4.14         2.56         3.88        14.24 
TCGA-13-2059 TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 
       12.23         8.58        10.78         8.75         6.28        23.05 
TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 
       25.94        26.20        72.20        27.48        25.38        19.07 
TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 TCGA-23-1022 TCGA-23-1023 
       16.67         2.93         2.66        47.54        42.51        40.54 
TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 
       26.83        31.73        49.41         8.81        29.10        18.87 
TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 TCGA-23-1116 
       51.35        54.51         3.22        31.20        68.68         4.57 
TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 
       33.30        86.01       129.96         4.27         6.38        39.09 
TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 TCGA-23-2072 TCGA-23-2077 TCGA-23-2078 
       33.47        58.13         0.53        24.95       115.89        87.48 
TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 
       91.66        77.00        49.84         2.76         4.70         4.50 
TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 
        7.63        19.63        11.64        21.80        41.56         7.66 
TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 
       22.32        54.08        63.55        47.41         6.31         6.38 
TCGA-24-1417 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 
        7.82         7.86         0.76         6.25         6.02         5.95 
TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 
        5.36         4.80        17.36        28.34        19.17        18.67 
TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 
       43.53         8.55        72.92        12.46        45.14       105.99 
TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 TCGA-24-1546 TCGA-24-1548 
        3.42         1.18        22.19        26.96        64.27        16.21 
TCGA-24-1549 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 
       56.58        51.91        41.39        58.09        88.50        70.62 
TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 
       39.88        19.53        44.09        45.50        47.70        25.87 
TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 
       10.26        17.23        90.15        88.34        48.33        38.24 
TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 TCGA-24-1845 TCGA-24-1847 TCGA-24-1849 
        8.32         3.48         3.72         3.81        11.28         5.75 
TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 
        5.49         9.80        22.65        30.21        16.41        11.05 
TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 
       81.11         4.87       151.99        44.84        58.16        34.82 
TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 
       14.43        53.95        18.48        28.18        64.01        44.48 
TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 
       57.07        36.16         0.79         0.36        47.54        31.63 
TCGA-24-2280 TCGA-24-2281 TCGA-24-2289 TCGA-24-2290 TCGA-24-2295 TCGA-24-2297 
       70.45        44.58        67.36        36.23        33.11        55.86 
TCGA-24-2298 TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 
       53.26         1.02        26.93        31.99        51.06        37.02 
TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 
        1.02        34.98        65.00        33.96         2.99        12.00 
TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 
        2.96        18.58        18.02        15.78         0.36        20.58 
TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 TCGA-25-1635 
        7.86         0.30        56.94        60.59        35.54        51.22 
TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 
       14.93        24.99        18.05        85.05        13.02        49.05 
TCGA-25-2393 TCGA-25-2396 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 
       38.04         3.02        45.01        19.99        42.02         2.96 
TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1693 
       29.00        30.97        26.96        78.87        44.71       101.75 
TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1701 
       38.53         0.79        33.70        31.17        68.28        16.90 
TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 
       18.64        59.67        18.25        41.95        29.23        34.62 
TCGA-29-1761 TCGA-29-1762 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 
       17.00        85.68        62.93        39.09        31.23        22.98 
TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 TCGA-29-1776 TCGA-29-1778 
       24.36        22.52        17.29        12.36        11.84        14.93 
TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 
        8.35         7.20         5.36        34.62        86.17        65.00 
TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 TCGA-29-2434 
       62.47        45.11         4.87        42.25        11.84        11.47 
TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 
        9.76        38.07        51.91        15.68         0.26        48.07 
TCGA-30-1860 TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 
       44.91        34.78         6.08        36.62         1.18        57.57 
TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 
       24.26        30.05        48.79        45.57        30.18        18.77 
TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-36-1568 TCGA-36-1569 
       22.45         6.71        42.51        44.09        28.73        29.06 
TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 
       21.53        22.85        22.55        30.05        25.74        27.85 
TCGA-36-1580 TCGA-36-1581 TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 
       24.23        24.69        35.05        33.01        29.49        29.79 
TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 
       25.91        25.08        23.80        21.60         2.24        20.98 
TCGA-36-2545 TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 TCGA-36-2552 
       18.31        20.52        14.17         6.05        16.14        11.47 
TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 
       26.04        23.74         9.44         7.46        22.39         1.48 
TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 TCGA-57-1993 
       24.03        11.38        21.14         1.74        22.32        25.05 
TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 
       25.02       180.16        80.12        22.32       116.12         9.40 
TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 
       34.39         2.14         5.39        44.78        11.11         8.05 
TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 TCGA-61-1733 TCGA-61-1734 
       20.94        31.40        18.54        27.88        31.76        28.47 
TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1895 TCGA-61-1899 
       48.79        44.84        35.80         2.43         1.41         8.42 
TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 TCGA-61-1907 
        5.79        11.41        13.02         9.07        34.13        31.30 
TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 TCGA-61-1917 
       37.02        42.48        48.92        56.58        67.73        43.43 
TCGA-61-1918 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 
       15.75        38.17         1.97         5.52        14.50        17.98 
TCGA-61-2003 TCGA-61-2008 TCGA-61-2009 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 
        3.98        30.61        39.85         1.18        45.96        45.40 
TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 
        4.80         4.77        51.72        71.74        61.64        58.39 
TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 
       60.62        65.49        55.50         6.48        76.83        20.68 
TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
       44.52       125.72        22.22         6.35        31.07         8.58 

  3Q LOSS MUTATED 3Q LOSS WILD-TYPE 
             0.53              0.26 
  3Q LOSS MUTATED 3Q LOSS WILD-TYPE 
           109.68            180.16 
  3Q LOSS MUTATED 3Q LOSS WILD-TYPE 
            28.96             28.03 
[1] "0.5 - 109.7 (29.0)" "0.3 - 180.2 (28.0)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "3Q LOSS MUTATED"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED"   "3Q LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "3Q LOSS MUTATED"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "3Q LOSS MUTATED"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED"   "3Q LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "3Q LOSS MUTATED"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "3Q LOSS MUTATED"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
  "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED"   "3Q LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "3Q LOSS MUTATED"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"3Q LOSS WILD-TYPE"   "3Q LOSS MUTATED" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
[1] "hr=" "1.1"
D46V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  3Q LOSS MUTATED         1    43                0
  3Q LOSS WILD-TYPE       1   505                2
D46V3, multiclass
                  clus
vv                 3Q LOSS MUTATED 3Q LOSS WILD-TYPE
  OMENTUM                        1                 1
  OVARY                         43               505
  PERITONEUM OVARY               0                 2
D46V4, continuous
D46V5, binary
                   cls
clus                  0   1
  3Q LOSS MUTATED     1  43
  3Q LOSS WILD-TYPE   2 516
[1] "tbl2"
                   cls
clus                [,1] [,2]
  3Q LOSS MUTATED      1   43
  3Q LOSS WILD-TYPE    2  516
     clus
vv    3Q LOSS MUTATED 3Q LOSS WILD-TYPE
  NO                1                 2
  YES              43               516
                   vv
clus                R0 R1 R2
  3Q LOSS MUTATED    1  0  0
  3Q LOSS WILD-TYPE 13 26  2
D46V6, multiclass
[1] "Remove cluster labels:" "3Q LOSS MUTATED"       
clus
  3Q LOSS MUTATED 3Q LOSS WILD-TYPE 
                1                41 
       TCGA-04-1516        TCGA-04-1644        TCGA-13-0807        TCGA-13-0911 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-29-2414        TCGA-29-2425        TCGA-29-2427 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-2428        TCGA-29-2429        TCGA-29-2431        TCGA-29-2432 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-29-2434        TCGA-29-2436        TCGA-36-2529        TCGA-36-2530 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-36-2532        TCGA-36-2534        TCGA-36-2537        TCGA-36-2538 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-36-2540        TCGA-36-2542        TCGA-36-2543        TCGA-36-2544 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-36-2545        TCGA-36-2547        TCGA-36-2548        TCGA-36-2549 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-36-2551        TCGA-36-2552        TCGA-42-2582        TCGA-42-2587 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-42-2588        TCGA-42-2590        TCGA-42-2593        TCGA-57-1993 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-59-2363        TCGA-59-2372        TCGA-61-2612        TCGA-61-2613 
"3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" "3Q LOSS WILD-TYPE" 
       TCGA-61-2614 
"3Q LOSS WILD-TYPE" 

Clustering(47) Variable = 4P LOSS MUTATION ANALYSIS
D47V1, survival
                   sevent
clus2                 0   1
  4P LOSS MUTATED   137 154
  4P LOSS WILD-TYPE 124 132
  4P LOSS MUTATED 4P LOSS WILD-TYPE 
              291               256 
  4P LOSS MUTATED 4P LOSS WILD-TYPE 
              154               132 
$`4P LOSS MUTATED`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1338 TCGA-04-1343 TCGA-04-1348 TCGA-04-1350 
       40.24        41.00        46.62        11.87        48.76        63.98 
TCGA-04-1361 TCGA-04-1362 TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 
       32.52        44.32        82.36        56.55        41.59        19.99 
TCGA-04-1536 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 TCGA-04-1649 TCGA-04-1651 
       29.06        84.20        55.40        48.89        64.64        36.23 
TCGA-04-1652 TCGA-04-1654 TCGA-04-1655 TCGA-09-0365 TCGA-09-0367 TCGA-09-0369 
       31.86        47.70        45.34         9.47        17.95        35.54 
TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1667 TCGA-09-1669 TCGA-09-1670 
        9.96        38.43        89.33        61.87        30.48        17.98 
TCGA-09-1673 TCGA-09-2043 TCGA-09-2044 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 
        3.02         6.15         6.12       112.37        71.11        63.09 
TCGA-09-2053 TCGA-09-2054 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 TCGA-10-0933 
       39.75        20.91        81.47        18.48        33.24        11.70 
TCGA-10-0935 TCGA-13-0717 TCGA-13-0725 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 
       35.41        24.59        12.39        15.19        17.79        55.17 
TCGA-13-0755 TCGA-13-0757 TCGA-13-0760 TCGA-13-0762 TCGA-13-0764 TCGA-13-0766 
        2.47        11.18        11.54        32.25        31.04        21.40 
TCGA-13-0793 TCGA-13-0795 TCGA-13-0801 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 
       28.70        19.56         8.28        43.82        35.28        35.28 
TCGA-13-0884 TCGA-13-0885 TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 
      107.18        91.40        66.64        70.39        61.81        67.99 
TCGA-13-0899 TCGA-13-0900 TCGA-13-0903 TCGA-13-0904 TCGA-13-0910 TCGA-13-0911 
       56.15        57.07        47.38        48.33        37.08        27.68 
TCGA-13-0912 TCGA-13-0919 TCGA-13-0921 TCGA-13-0924 TCGA-13-1403 TCGA-13-1407 
       34.06        14.89         4.64         6.08        10.88         6.05 
TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 TCGA-13-1411 TCGA-13-1481 TCGA-13-1484 
        5.92         6.84         4.70         4.21        87.06        98.04 
TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1495 
       22.39        70.82        82.88        52.44        73.55        49.22 
TCGA-13-1497 TCGA-13-1498 TCGA-13-1500 TCGA-13-1504 TCGA-13-1509 TCGA-13-1511 
       54.31        37.61        13.97        16.57         4.14         3.88 
TCGA-13-1512 TCGA-13-2059 TCGA-13-2061 TCGA-13-2065 TCGA-20-0990 TCGA-20-0991 
        3.09        12.23        10.78         8.75        25.94        26.20 
TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 
       27.48        25.38        19.07         2.93         2.66        47.54 
TCGA-23-1022 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 
       42.51        49.41         8.81        29.10        18.87         2.24 
TCGA-23-1111 TCGA-23-1113 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 
        3.22        31.20         4.57        33.30        86.01       129.96 
TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-2072 TCGA-23-2084 TCGA-23-2641 
       39.09        33.47        58.13        24.95        49.84         2.76 
TCGA-23-2643 TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 TCGA-24-0982 
        4.70        19.63        11.64        21.80        41.56        22.32 
TCGA-24-1103 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 
       54.08        47.41         6.31         6.38         7.82         7.99 
TCGA-24-1422 TCGA-24-1425 TCGA-24-1426 TCGA-24-1431 TCGA-24-1434 TCGA-24-1436 
        0.76         5.95         5.36        19.17        18.67         8.55 
TCGA-24-1463 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1548 
       72.92         9.11         3.42         1.18        22.19        16.21 
TCGA-24-1551 TCGA-24-1552 TCGA-24-1555 TCGA-24-1560 TCGA-24-1562 TCGA-24-1567 
       51.91        41.39        88.50        44.09        45.50        17.23 
TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 TCGA-24-1844 
       90.15        88.34        48.33        38.24         8.32         3.72 
TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 TCGA-24-1850 TCGA-24-1923 TCGA-24-1924 
        3.81         4.37        11.28         5.49        22.65        30.21 
TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 TCGA-24-2027 TCGA-24-2029 
       81.11         4.87       151.99        44.84       109.68        14.43 
TCGA-24-2030 TCGA-24-2254 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2288 
       53.95        57.07        47.54        31.63        70.45         0.82 
TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 TCGA-24-2298 TCGA-25-1314 
       36.23        16.64        33.11        55.86        53.26        31.99 
TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 
       37.02         1.02        34.98        33.96         2.99        12.00 
TCGA-25-1623 TCGA-25-1627 TCGA-25-1628 TCGA-25-1631 TCGA-25-1633 TCGA-25-1634 
       18.58         0.36        20.58         0.30        60.59        35.54 
TCGA-25-1870 TCGA-25-1871 TCGA-25-2400 TCGA-25-2404 TCGA-29-1688 TCGA-29-1695 
       14.93        24.99        42.02        29.00        78.87         0.79 
TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 TCGA-29-1705 TCGA-29-1762 
       31.17        68.28         0.53        16.90        18.25        85.68 
TCGA-29-1763 TCGA-29-1764 TCGA-29-1768 TCGA-29-1771 TCGA-29-1777 TCGA-29-1778 
       66.77        62.93        31.23        22.52        12.30        14.93 
TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-29-2428 TCGA-29-2431 TCGA-29-2434 
        8.35         7.20         5.36        45.11        42.25        11.47 
TCGA-30-1714 TCGA-30-1853 TCGA-30-1856 TCGA-30-1859 TCGA-30-1861 TCGA-30-1866 
       38.07        36.26        15.68        48.07        34.78        36.62 
TCGA-30-1880 TCGA-30-1891 TCGA-31-1950 TCGA-31-1953 TCGA-31-1955 TCGA-31-1959 
       57.57        30.05        18.77         6.71        42.51         2.17 
TCGA-36-1568 TCGA-36-1576 TCGA-36-1577 TCGA-36-1580 TCGA-36-1581 TCGA-36-2532 
       28.73        30.05        25.74        24.23        24.69        29.49 
TCGA-36-2538 TCGA-36-2542 TCGA-36-2543 TCGA-36-2545 TCGA-36-2548 TCGA-36-2551 
       25.08        21.60         2.24        18.31        14.17        16.14 
TCGA-36-2552 TCGA-42-2587 TCGA-42-2588 TCGA-42-2591 TCGA-57-1582 TCGA-57-1584 
       11.47        23.74         9.44        22.39        24.03        21.14 
TCGA-57-1585 TCGA-57-1992 TCGA-57-1993 TCGA-59-2350 TCGA-59-2352 TCGA-59-2354 
        1.74        28.96        25.05        22.32         9.40        34.39 
TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 TCGA-61-1730 TCGA-61-1734 TCGA-61-1736 
        2.14         5.39        44.78         4.34        28.47        48.79 
TCGA-61-1737 TCGA-61-1740 TCGA-61-1741 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 
       44.84         2.43        33.67         1.41         8.42         5.79 
TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 TCGA-61-1913 TCGA-61-1914 TCGA-61-1917 
       13.02         9.07        34.13        48.92        56.58        43.43 
TCGA-61-1919 TCGA-61-1995 TCGA-61-2003 TCGA-61-2009 TCGA-61-2016 TCGA-61-2018 
       38.17         1.97         3.98        39.85         1.18        45.40 
TCGA-61-2087 TCGA-61-2092 TCGA-61-2094 TCGA-61-2101 TCGA-61-2109 TCGA-61-2110 
        4.80        51.72        71.74        55.50        20.68        44.52 
TCGA-61-2111 TCGA-61-2113 TCGA-61-2613 
      125.72        22.22        31.07 

$`4P LOSS WILD-TYPE`
TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1342 TCGA-04-1346 TCGA-04-1347 
        1.81        49.15         2.01        18.51        65.49        63.06 
TCGA-04-1349 TCGA-04-1351 TCGA-04-1356 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 
       21.57        65.46        49.28        33.67        76.54        71.47 
TCGA-04-1525 TCGA-04-1530 TCGA-04-1646 TCGA-04-1648 TCGA-09-0364 TCGA-09-0366 
       38.37       119.08        27.88        28.64        29.16        57.73 
TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1668 TCGA-09-1672 TCGA-09-1674 
       74.89        41.59        57.57        55.36         5.85         8.55 
TCGA-09-1675 TCGA-09-2045 TCGA-09-2048 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 
       97.55        35.15         4.50        26.93        12.46        54.31 
TCGA-10-0926 TCGA-10-0931 TCGA-10-0934 TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 
       25.91        32.28         3.88        35.80        15.12        19.86 
TCGA-13-0714 TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 TCGA-13-0726 TCGA-13-0758 
        6.21        44.55        39.58         2.73        31.07        11.38 
TCGA-13-0761 TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0794 TCGA-13-0797 
       34.06         8.42        38.93        36.72        30.35         8.71 
TCGA-13-0799 TCGA-13-0800 TCGA-13-0802 TCGA-13-0807 TCGA-13-0883 TCGA-13-0886 
        7.79         8.12         8.19        13.61        68.91        74.27 
TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 TCGA-13-0901 TCGA-13-0905 TCGA-13-0906 
       69.01        43.36        57.47        19.36        47.84        44.94 
TCGA-13-0908 TCGA-13-0913 TCGA-13-0916 TCGA-13-0920 TCGA-13-0923 TCGA-13-1404 
       44.84        29.98        21.14        13.81         6.41         6.61 
TCGA-13-1405 TCGA-13-1412 TCGA-13-1477 TCGA-13-1482 TCGA-13-1483 TCGA-13-1485 
        7.36         5.33        54.61        61.71        29.39        20.68 
TCGA-13-1494 TCGA-13-1496 TCGA-13-1499 TCGA-13-1501 TCGA-13-1505 TCGA-13-1506 
       38.17         4.24        38.37        32.84         4.21         4.41 
TCGA-13-1507 TCGA-13-1510 TCGA-13-2057 TCGA-13-2060 TCGA-13-2071 TCGA-20-0987 
        4.77         2.56        14.24         8.58         6.28        23.05 
TCGA-20-0996 TCGA-20-1685 TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 
       72.20        16.67        40.54        15.39        26.83        31.73 
TCGA-23-1109 TCGA-23-1110 TCGA-23-1114 TCGA-23-1120 TCGA-23-1121 TCGA-23-1809 
       51.35        54.51        68.68         4.27         6.38         0.53 
TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2645 TCGA-24-0966 
      115.89        87.48        91.66        77.00         4.50         7.63 
TCGA-24-0980 TCGA-24-1104 TCGA-24-1419 TCGA-24-1423 TCGA-24-1424 TCGA-24-1427 
        7.66        63.55         7.86         6.25         6.02         4.80 
TCGA-24-1428 TCGA-24-1430 TCGA-24-1435 TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 
       17.36        28.34        43.53        12.46        45.14       105.99 
TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 TCGA-24-1549 TCGA-24-1550 TCGA-24-1553 
       26.96        57.37        64.27        56.58        41.06        58.09 
TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 
       70.62        39.88        19.53        47.70        25.87        10.26 
TCGA-24-1843 TCGA-24-1849 TCGA-24-1920 TCGA-24-1927 TCGA-24-1928 TCGA-24-2024 
        3.48         5.75         9.80        16.41        11.05        58.16 
TCGA-24-2026 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2260 
       34.82        18.48        28.18        64.01        44.48        36.16 
TCGA-24-2261 TCGA-24-2262 TCGA-24-2281 TCGA-24-2289 TCGA-25-1312 TCGA-25-1313 
        0.79         0.36        44.58        67.36         1.02        26.93 
TCGA-25-1315 TCGA-25-1319 TCGA-25-1320 TCGA-25-1329 TCGA-25-1625 TCGA-25-1626 
       51.06        65.00        36.95         2.96        18.02        15.78 
TCGA-25-1630 TCGA-25-1632 TCGA-25-1635 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 
        7.86        56.94        51.22        18.05        85.05        13.02 
TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 
       49.05         1.02        38.04         3.02        12.00        45.01 
TCGA-25-2399 TCGA-25-2401 TCGA-25-2408 TCGA-25-2409 TCGA-29-1690 TCGA-29-1691 
       19.99         2.96        30.97        26.96        44.71        47.18 
TCGA-29-1693 TCGA-29-1694 TCGA-29-1696 TCGA-29-1702 TCGA-29-1703 TCGA-29-1707 
      101.75        38.53        33.70        18.64        59.67        41.95 
TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 TCGA-29-1766 TCGA-29-1769 TCGA-29-1770 
       29.23        34.62        17.00        39.09        22.98        24.36 
TCGA-29-1774 TCGA-29-1775 TCGA-29-1776 TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 
       17.29        12.36        11.84        34.62        86.17        65.00 
TCGA-29-2427 TCGA-29-2429 TCGA-29-2432 TCGA-29-2436 TCGA-30-1718 TCGA-30-1855 
       62.47         4.87        11.84         9.76        51.91         2.47 
TCGA-30-1857 TCGA-30-1860 TCGA-30-1862 TCGA-30-1867 TCGA-30-1887 TCGA-30-1892 
        0.26        44.91         6.08         1.18        24.26        48.79 
TCGA-31-1944 TCGA-31-1946 TCGA-31-1951 TCGA-31-1956 TCGA-36-1569 TCGA-36-1570 
       45.57        30.18        22.45        44.09        29.06        21.53 
TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1578 TCGA-36-2529 TCGA-36-2530 
       22.85        22.55         8.55        27.85        35.05        33.01 
TCGA-36-2534 TCGA-36-2537 TCGA-36-2540 TCGA-36-2544 TCGA-36-2547 TCGA-36-2549 
       29.79        25.91        23.80        20.98        20.52         6.05 
TCGA-42-2582 TCGA-42-2589 TCGA-42-2590 TCGA-42-2593 TCGA-57-1583 TCGA-57-1586 
       26.04         7.56         7.46         1.48        11.38        22.32 
TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2351 TCGA-61-1721 TCGA-61-1722 
       25.02       180.16        80.12       116.12        11.11         8.05 
TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 TCGA-61-1733 TCGA-61-1738 
       20.94        31.40        18.54        27.88        31.76        35.80 
TCGA-61-1743 TCGA-61-1901 TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1915 
       43.69        11.41        31.30        37.02        42.48        67.73 
TCGA-61-1918 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2008 TCGA-61-2012 
       15.75         5.52        14.50        17.98        30.61        30.64 
TCGA-61-2017 TCGA-61-2088 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 
       45.96         4.77        61.64        58.39        60.62        65.49 
TCGA-61-2102 TCGA-61-2104 TCGA-61-2612 TCGA-61-2614 
        6.48        76.83         6.35         8.58 

  4P LOSS MUTATED 4P LOSS WILD-TYPE 
             0.30              0.26 
  4P LOSS MUTATED 4P LOSS WILD-TYPE 
           151.99            180.16 
  4P LOSS MUTATED 4P LOSS WILD-TYPE 
            28.47             28.03 
[1] "0.3 - 152.0 (28.5)" "0.3 - 180.2 (28.0)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
  "4P LOSS MUTATED"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE"   "4P LOSS MUTATED" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
  "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" "4P LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED"   "4P LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"4P LOSS WILD-TYPE"   "4P LOSS MUTATED" "4P LOSS WILD-TYPE" 
[1] "hr=" "1"  
D47V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  4P LOSS MUTATED         2   293                0
  4P LOSS WILD-TYPE       0   255                2
D47V3, multiclass
                  clus
vv                 4P LOSS MUTATED 4P LOSS WILD-TYPE
  OMENTUM                        2                 0
  OVARY                        293               255
  PERITONEUM OVARY               0                 2
D47V4, continuous
D47V5, binary
                   cls
clus                  0   1
  4P LOSS MUTATED     2 302
  4P LOSS WILD-TYPE   1 257
[1] "tbl2"
                   cls
clus                [,1] [,2]
  4P LOSS MUTATED      2  302
  4P LOSS WILD-TYPE    1  257
     clus
vv    4P LOSS MUTATED 4P LOSS WILD-TYPE
  NO                2                 1
  YES             302               257
                   vv
clus                R0 R1 R2
  4P LOSS MUTATED    9 10  1
  4P LOSS WILD-TYPE  5 16  1
D47V6, multiclass
    clus
vv   4P LOSS MUTATED 4P LOSS WILD-TYPE
  R0               9                 5
  R1              10                16
  R2               1                 1

Clustering(48) Variable = 4Q LOSS MUTATION ANALYSIS
D48V1, survival
                   sevent
clus2                 0   1
  4Q LOSS MUTATED   158 174
  4Q LOSS WILD-TYPE 103 112
  4Q LOSS MUTATED 4Q LOSS WILD-TYPE 
              332               215 
  4Q LOSS MUTATED 4Q LOSS WILD-TYPE 
              174               112 
$`4Q LOSS MUTATED`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1336 TCGA-04-1338 TCGA-04-1343 TCGA-04-1348 
       40.24        41.00        49.15        46.62        11.87        48.76 
TCGA-04-1350 TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1367 TCGA-04-1371 
       63.98        32.52        44.32        33.67        71.47        82.36 
TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1536 TCGA-04-1542 TCGA-04-1638 
       56.55        41.59        19.99        29.06        84.20        55.40 
TCGA-04-1644 TCGA-04-1646 TCGA-04-1649 TCGA-04-1652 TCGA-04-1654 TCGA-04-1655 
       48.89        27.88        64.64        31.86        47.70        45.34 
TCGA-09-0367 TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 
       17.95        35.54         9.96        38.43        89.33        74.89 
TCGA-09-1666 TCGA-09-1667 TCGA-09-1669 TCGA-09-1670 TCGA-09-1673 TCGA-09-1674 
       57.57        61.87        30.48        17.98         3.02         8.55 
TCGA-09-2043 TCGA-09-2044 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 
        6.15         6.12       112.37        71.11        63.09        39.75 
TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 
       20.91        26.93        12.46        25.91        81.47        18.48 
TCGA-10-0930 TCGA-10-0933 TCGA-10-0935 TCGA-10-0937 TCGA-13-0717 TCGA-13-0720 
       33.24        11.70        35.41        15.12        24.59        44.55 
TCGA-13-0724 TCGA-13-0725 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0757 
        2.73        12.39        15.19        17.79        55.17        11.18 
TCGA-13-0760 TCGA-13-0762 TCGA-13-0766 TCGA-13-0793 TCGA-13-0795 TCGA-13-0797 
       11.54        32.25        21.40        28.70        19.56         8.71 
TCGA-13-0801 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0884 TCGA-13-0885 
        8.28        43.82        35.28        35.28       107.18        91.40 
TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 TCGA-13-0899 TCGA-13-0903 
       66.64        70.39        61.81        67.99        56.15        47.38 
TCGA-13-0904 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0916 TCGA-13-0919 
       48.33        37.08        27.68        34.06        21.14        14.89 
TCGA-13-0921 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1407 TCGA-13-1408 
        4.64         6.08        10.88         6.61         6.05         5.92 
TCGA-13-1409 TCGA-13-1410 TCGA-13-1481 TCGA-13-1483 TCGA-13-1484 TCGA-13-1487 
        6.84         4.70        87.06        29.39        98.04        22.39 
TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1495 TCGA-13-1497 
       70.82        82.88        52.44        73.55        49.22        54.31 
TCGA-13-1499 TCGA-13-1500 TCGA-13-1504 TCGA-13-1505 TCGA-13-1509 TCGA-13-1511 
       38.37        13.97        16.57         4.21         4.14         3.88 
TCGA-13-1512 TCGA-13-2059 TCGA-13-2061 TCGA-13-2065 TCGA-20-0990 TCGA-20-1683 
        3.09        12.23        10.78         8.75        25.94        25.38 
TCGA-20-1684 TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 TCGA-23-1022 TCGA-23-1028 
       19.07         2.93         2.66        47.54        42.51        49.41 
TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1110 TCGA-23-1111 
        8.81        29.10        18.87         2.24        54.51         3.22 
TCGA-23-1113 TCGA-23-1114 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 
       31.20        68.68         4.57        33.30        86.01       129.96 
TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-2072 TCGA-23-2084 TCGA-23-2641 
       39.09        33.47        58.13        24.95        49.84         2.76 
TCGA-23-2643 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 TCGA-24-0982 TCGA-24-1103 
        4.70        11.64        21.80        41.56        22.32        54.08 
TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 
       47.41         6.31         6.38         7.82         7.99         7.86 
TCGA-24-1422 TCGA-24-1423 TCGA-24-1425 TCGA-24-1426 TCGA-24-1428 TCGA-24-1431 
        0.76         6.25         5.95         5.36        17.36        19.17 
TCGA-24-1434 TCGA-24-1436 TCGA-24-1463 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 
       18.67         8.55        72.92         9.11         3.42         1.18 
TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1548 TCGA-24-1551 TCGA-24-1552 
       22.19        26.96        57.37        16.21        51.91        41.39 
TCGA-24-1555 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1567 TCGA-24-1603 
       88.50        44.09        45.50        47.70        17.23        90.15 
TCGA-24-1604 TCGA-24-1616 TCGA-24-1842 TCGA-24-1844 TCGA-24-1845 TCGA-24-1846 
       88.34        38.24         8.32         3.72         3.81         4.37 
TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 TCGA-24-1928 
       11.28         5.75         5.49         9.80        22.65        11.05 
TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 TCGA-24-2027 TCGA-24-2029 
       81.11         4.87       151.99        44.84       109.68        14.43 
TCGA-24-2030 TCGA-24-2254 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 
       53.95        57.07        47.54        31.63        70.45        44.58 
TCGA-24-2288 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 TCGA-24-2298 
        0.82        36.23        16.64        33.11        55.86        53.26 
TCGA-25-1312 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 
        1.02        31.99        51.06        37.02         1.02        34.98 
TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 
       33.96         2.99        12.00         2.96        18.58        18.02 
TCGA-25-1627 TCGA-25-1628 TCGA-25-1630 TCGA-25-1631 TCGA-25-1633 TCGA-25-1634 
        0.36        20.58         7.86         0.30        60.59        35.54 
TCGA-25-1870 TCGA-25-1871 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 TCGA-25-2398 
       14.93        24.99        13.02        49.05         1.02        45.01 
TCGA-25-2400 TCGA-25-2404 TCGA-25-2408 TCGA-29-1688 TCGA-29-1695 TCGA-29-1697 
       42.02        29.00        30.97        78.87         0.79        31.17 
TCGA-29-1698 TCGA-29-1699 TCGA-29-1705 TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 
       68.28         0.53        18.25        85.68        66.77        62.93 
TCGA-29-1769 TCGA-29-1771 TCGA-29-1776 TCGA-29-1777 TCGA-29-1781 TCGA-29-1783 
       22.98        22.52        11.84        12.30         8.35         7.20 
TCGA-29-1784 TCGA-29-2428 TCGA-29-2431 TCGA-29-2434 TCGA-30-1714 TCGA-30-1853 
        5.36        45.11        42.25        11.47        38.07        36.26 
TCGA-30-1856 TCGA-30-1859 TCGA-30-1861 TCGA-30-1866 TCGA-30-1880 TCGA-30-1891 
       15.68        48.07        34.78        36.62        57.57        30.05 
TCGA-31-1946 TCGA-31-1950 TCGA-31-1953 TCGA-31-1955 TCGA-31-1959 TCGA-36-1568 
       30.18        18.77         6.71        42.51         2.17        28.73 
TCGA-36-1570 TCGA-36-1571 TCGA-36-1576 TCGA-36-1577 TCGA-36-1580 TCGA-36-1581 
       21.53        22.85        30.05        25.74        24.23        24.69 
TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2538 TCGA-36-2542 TCGA-36-2543 
       35.05        33.01        29.49        25.08        21.60         2.24 
TCGA-36-2545 TCGA-36-2548 TCGA-36-2551 TCGA-36-2552 TCGA-42-2587 TCGA-42-2588 
       18.31        14.17        16.14        11.47        23.74         9.44 
TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1584 
        7.56         7.46        22.39         1.48        24.03        21.14 
TCGA-57-1585 TCGA-57-1992 TCGA-57-1993 TCGA-59-2350 TCGA-59-2352 TCGA-59-2355 
        1.74        28.96        25.05        22.32         9.40         2.14 
TCGA-59-2363 TCGA-59-2372 TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 
        5.39        44.78         4.34        31.76        28.47        48.79 
TCGA-61-1737 TCGA-61-1740 TCGA-61-1741 TCGA-61-1899 TCGA-61-1900 TCGA-61-1903 
       44.84         2.43        33.67         8.42         5.79        13.02 
TCGA-61-1904 TCGA-61-1906 TCGA-61-1907 TCGA-61-1914 TCGA-61-1917 TCGA-61-1918 
        9.07        34.13        31.30        56.58        43.43        15.75 
TCGA-61-1919 TCGA-61-1995 TCGA-61-2003 TCGA-61-2009 TCGA-61-2016 TCGA-61-2018 
       38.17         1.97         3.98        39.85         1.18        45.40 
TCGA-61-2087 TCGA-61-2092 TCGA-61-2094 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 
        4.80        51.72        71.74        60.62        65.49        55.50 
TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 
        6.48        76.83        20.68        44.52       125.72        22.22 
TCGA-61-2613 TCGA-61-2614 
       31.07         8.58 

$`4Q LOSS WILD-TYPE`
TCGA-04-1335 TCGA-04-1337 TCGA-04-1342 TCGA-04-1346 TCGA-04-1347 TCGA-04-1349 
        1.81         2.01        18.51        65.49        63.06        21.57 
TCGA-04-1351 TCGA-04-1356 TCGA-04-1365 TCGA-04-1525 TCGA-04-1530 TCGA-04-1648 
       65.46        49.28        76.54        38.37       119.08        28.64 
TCGA-04-1651 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-1665 TCGA-09-1668 
       36.23        29.16         9.47        57.73        41.59        55.36 
TCGA-09-1672 TCGA-09-1675 TCGA-09-2045 TCGA-09-2048 TCGA-10-0925 TCGA-10-0931 
        5.85        97.55        35.15         4.50        54.31        32.28 
TCGA-10-0934 TCGA-10-0936 TCGA-10-0938 TCGA-13-0714 TCGA-13-0723 TCGA-13-0726 
        3.88        35.80        19.86         6.21        39.58        31.07 
TCGA-13-0755 TCGA-13-0758 TCGA-13-0761 TCGA-13-0764 TCGA-13-0768 TCGA-13-0791 
        2.47        11.38        34.06        31.04         8.42        38.93 
TCGA-13-0792 TCGA-13-0794 TCGA-13-0799 TCGA-13-0800 TCGA-13-0802 TCGA-13-0807 
       36.72        30.35         7.79         8.12         8.19        13.61 
TCGA-13-0883 TCGA-13-0886 TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 TCGA-13-0900 
       68.91        74.27        69.01        43.36        57.47        57.07 
TCGA-13-0901 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0913 TCGA-13-0920 
       19.36        47.84        44.94        44.84        29.98        13.81 
TCGA-13-0923 TCGA-13-1405 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 TCGA-13-1482 
        6.41         7.36         4.21         5.33        54.61        61.71 
TCGA-13-1485 TCGA-13-1494 TCGA-13-1496 TCGA-13-1498 TCGA-13-1501 TCGA-13-1506 
       20.68        38.17         4.24        37.61        32.84         4.41 
TCGA-13-1507 TCGA-13-1510 TCGA-13-2057 TCGA-13-2060 TCGA-13-2071 TCGA-20-0987 
        4.77         2.56        14.24         8.58         6.28        23.05 
TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 TCGA-20-1685 TCGA-23-1023 TCGA-23-1024 
       26.20        72.20        27.48        16.67        40.54        15.39 
TCGA-23-1026 TCGA-23-1027 TCGA-23-1109 TCGA-23-1120 TCGA-23-1121 TCGA-23-1809 
       26.83        31.73        51.35         4.27         6.38         0.53 
TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2645 TCGA-24-0966 
      115.89        87.48        91.66        77.00         4.50         7.63 
TCGA-24-0968 TCGA-24-0980 TCGA-24-1104 TCGA-24-1424 TCGA-24-1427 TCGA-24-1430 
       19.63         7.66        63.55         6.02         4.80        28.34 
TCGA-24-1435 TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 TCGA-24-1546 TCGA-24-1549 
       43.53        12.46        45.14       105.99        64.27        56.58 
TCGA-24-1550 TCGA-24-1553 TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 TCGA-24-1564 
       41.06        58.09        70.62        39.88        19.53        25.87 
TCGA-24-1565 TCGA-24-1614 TCGA-24-1843 TCGA-24-1924 TCGA-24-1927 TCGA-24-2024 
       10.26        48.33         3.48        30.21        16.41        58.16 
TCGA-24-2026 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2260 
       34.82        18.48        28.18        64.01        44.48        36.16 
TCGA-24-2261 TCGA-24-2262 TCGA-24-2289 TCGA-25-1313 TCGA-25-1319 TCGA-25-1320 
        0.79         0.36        67.36        26.93        65.00        36.95 
TCGA-25-1626 TCGA-25-1632 TCGA-25-1635 TCGA-25-1877 TCGA-25-1878 TCGA-25-2393 
       15.78        56.94        51.22        18.05        85.05        38.04 
TCGA-25-2396 TCGA-25-2397 TCGA-25-2399 TCGA-25-2401 TCGA-25-2409 TCGA-29-1690 
        3.02        12.00        19.99         2.96        26.96        44.71 
TCGA-29-1691 TCGA-29-1693 TCGA-29-1694 TCGA-29-1696 TCGA-29-1701 TCGA-29-1702 
       47.18       101.75        38.53        33.70        16.90        18.64 
TCGA-29-1703 TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 TCGA-29-1766 
       59.67        41.95        29.23        34.62        17.00        39.09 
TCGA-29-1768 TCGA-29-1770 TCGA-29-1774 TCGA-29-1775 TCGA-29-1778 TCGA-29-1785 
       31.23        24.36        17.29        12.36        14.93        34.62 
TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2429 TCGA-29-2432 TCGA-29-2436 
       86.17        65.00        62.47         4.87        11.84         9.76 
TCGA-30-1718 TCGA-30-1855 TCGA-30-1857 TCGA-30-1860 TCGA-30-1862 TCGA-30-1867 
       51.91         2.47         0.26        44.91         6.08         1.18 
TCGA-30-1887 TCGA-30-1892 TCGA-31-1944 TCGA-31-1951 TCGA-31-1956 TCGA-36-1569 
       24.26        48.79        45.57        22.45        44.09        29.06 
TCGA-36-1574 TCGA-36-1575 TCGA-36-1578 TCGA-36-2534 TCGA-36-2537 TCGA-36-2540 
       22.55         8.55        27.85        29.79        25.91        23.80 
TCGA-36-2544 TCGA-36-2547 TCGA-36-2549 TCGA-42-2582 TCGA-57-1583 TCGA-57-1586 
       20.98        20.52         6.05        26.04        11.38        22.32 
TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2351 TCGA-59-2354 TCGA-61-1721 
       25.02       180.16        80.12       116.12        34.39        11.11 
TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 TCGA-61-1738 
        8.05        20.94        31.40        18.54        27.88        35.80 
TCGA-61-1743 TCGA-61-1895 TCGA-61-1901 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 
       43.69         1.41        11.41        37.02        42.48        48.92 
TCGA-61-1915 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2008 TCGA-61-2012 
       67.73         5.52        14.50        17.98        30.61        30.64 
TCGA-61-2017 TCGA-61-2088 TCGA-61-2095 TCGA-61-2096 TCGA-61-2612 
       45.96         4.77        61.64        58.39         6.35 

  4Q LOSS MUTATED 4Q LOSS WILD-TYPE 
             0.30              0.26 
  4Q LOSS MUTATED 4Q LOSS WILD-TYPE 
           151.99            180.16 
  4Q LOSS MUTATED 4Q LOSS WILD-TYPE 
           26.435            29.160 
[1] "0.3 - 152.0 (26.4)" "0.3 - 180.2 (29.2)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
  "4Q LOSS MUTATED" "4Q LOSS WILD-TYPE" "4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"4Q LOSS WILD-TYPE"   "4Q LOSS MUTATED"   "4Q LOSS MUTATED" 
[1] "hr=" "1.1"
D48V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  4Q LOSS MUTATED         2   333                1
  4Q LOSS WILD-TYPE       0   215                1
D48V3, multiclass
                  clus
vv                 4Q LOSS MUTATED 4Q LOSS WILD-TYPE
  OMENTUM                        2                 0
  OVARY                        333               215
  PERITONEUM OVARY               1                 1
D48V4, continuous
D48V5, binary
                   cls
clus                  0   1
  4Q LOSS MUTATED     2 343
  4Q LOSS WILD-TYPE   1 216
[1] "tbl2"
                   cls
clus                [,1] [,2]
  4Q LOSS MUTATED      2  343
  4Q LOSS WILD-TYPE    1  216
     clus
vv    4Q LOSS MUTATED 4Q LOSS WILD-TYPE
  NO                2                 1
  YES             343               216
                   vv
clus                R0 R1 R2
  4Q LOSS MUTATED   10 14  2
  4Q LOSS WILD-TYPE  4 12  0
D48V6, multiclass
    clus
vv   4Q LOSS MUTATED 4Q LOSS WILD-TYPE
  R0              10                 4
  R1              14                12
  R2               2                 0

Clustering(49) Variable = 5P LOSS MUTATION ANALYSIS
D49V1, survival
                   sevent
clus2                 0   1
  5P LOSS MUTATED    55  69
  5P LOSS WILD-TYPE 206 217
  5P LOSS MUTATED 5P LOSS WILD-TYPE 
              124               423 
  5P LOSS MUTATED 5P LOSS WILD-TYPE 
               69               217 
$`5P LOSS MUTATED`
TCGA-04-1332 TCGA-04-1336 TCGA-04-1338 TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 
       41.00        49.15        46.62        65.46        49.28        32.52 
TCGA-04-1371 TCGA-04-1517 TCGA-04-1648 TCGA-09-0364 TCGA-09-0365 TCGA-09-1665 
       82.36        19.99        28.64        29.16         9.47        41.59 
TCGA-09-1669 TCGA-09-2044 TCGA-09-2049 TCGA-10-0938 TCGA-13-0714 TCGA-13-0724 
       30.48         6.12       112.37        19.86         6.21         2.73 
TCGA-13-0761 TCGA-13-0762 TCGA-13-0791 TCGA-13-0795 TCGA-13-0803 TCGA-13-0804 
       34.06        32.25        38.93        19.56        43.82        35.28 
TCGA-13-0805 TCGA-13-0884 TCGA-13-0885 TCGA-13-0887 TCGA-13-0888 TCGA-13-0890 
       35.28       107.18        91.40        66.64        70.39        67.99 
TCGA-13-0893 TCGA-13-0919 TCGA-13-0920 TCGA-13-1405 TCGA-13-1412 TCGA-13-1491 
       43.36        14.89        13.81         7.36         5.33        52.44 
TCGA-13-1496 TCGA-13-1497 TCGA-13-2057 TCGA-13-2059 TCGA-13-2060 TCGA-20-1682 
        4.24        54.31        14.24        12.23         8.58        27.48 
TCGA-20-1683 TCGA-23-1021 TCGA-23-1022 TCGA-23-1028 TCGA-23-1109 TCGA-23-1114 
       25.38        47.54        42.51        49.41        51.35        68.68 
TCGA-23-1118 TCGA-23-1123 TCGA-23-2072 TCGA-24-0970 TCGA-24-1419 TCGA-24-1424 
       86.01        33.47        24.95        11.64         7.86         6.02 
TCGA-24-1430 TCGA-24-1431 TCGA-24-1464 TCGA-24-1466 TCGA-24-1548 TCGA-24-1558 
       28.34        19.17        12.46        45.14        16.21        19.53 
TCGA-24-1567 TCGA-24-1614 TCGA-24-1843 TCGA-24-1920 TCGA-24-2019 TCGA-24-2254 
       17.23        48.33         3.48         9.80         4.87        57.07 
TCGA-24-2261 TCGA-24-2271 TCGA-24-2280 TCGA-24-2293 TCGA-25-1312 TCGA-25-1313 
        0.79        31.63        70.45        16.64         1.02        26.93 
TCGA-25-1317 TCGA-25-1320 TCGA-25-1323 TCGA-25-1630 TCGA-25-1633 TCGA-25-1635 
        1.02        36.95        12.00         7.86        60.59        51.22 
TCGA-25-1870 TCGA-25-1871 TCGA-25-2398 TCGA-25-2400 TCGA-29-1697 TCGA-29-1702 
       14.93        24.99        45.01        42.02        31.17        18.64 
TCGA-29-1711 TCGA-29-1762 TCGA-29-1778 TCGA-29-1783 TCGA-29-1784 TCGA-29-2414 
       34.62        85.68        14.93         7.20         5.36        86.17 
TCGA-29-2428 TCGA-30-1855 TCGA-30-1859 TCGA-30-1861 TCGA-30-1867 TCGA-30-1887 
       45.11         2.47        48.07        34.78         1.18        24.26 
TCGA-30-1891 TCGA-31-1953 TCGA-31-1959 TCGA-36-1575 TCGA-36-2538 TCGA-36-2547 
       30.05         6.71         2.17         8.55        25.08        20.52 
TCGA-36-2552 TCGA-57-1583 TCGA-57-1994 TCGA-59-2348 TCGA-59-2351 TCGA-59-2352 
       11.47        11.38        25.02       180.16       116.12         9.40 
TCGA-59-2363 TCGA-61-1724 TCGA-61-1728 TCGA-61-1730 TCGA-61-1740 TCGA-61-1741 
        5.39        20.94        27.88         4.34         2.43        33.67 
TCGA-61-1743 TCGA-61-1906 TCGA-61-1907 TCGA-61-1917 TCGA-61-1998 TCGA-61-2094 
       43.69        34.13        31.30        43.43         5.52        71.74 
TCGA-61-2096 TCGA-61-2097 TCGA-61-2102 TCGA-61-2104 
       58.39        60.62         6.48        76.83 

$`5P LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1335 TCGA-04-1337 TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 
       40.24         1.81         2.01        18.51        11.87        65.49 
TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 TCGA-04-1362 TCGA-04-1364 
       63.06        48.76        21.57        63.98        44.32        33.67 
TCGA-04-1365 TCGA-04-1367 TCGA-04-1514 TCGA-04-1516 TCGA-04-1525 TCGA-04-1530 
       76.54        71.47        56.55        41.59        38.37       119.08 
TCGA-04-1536 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 TCGA-04-1649 
       29.06        84.20        55.40        48.89        27.88        64.64 
TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 TCGA-04-1655 TCGA-09-0366 TCGA-09-0367 
       36.23        31.86        47.70        45.34        57.73        17.95 
TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1666 
       35.54         9.96        38.43        89.33        74.89        57.57 
TCGA-09-1667 TCGA-09-1668 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 
       61.87        55.36        17.98         5.85         3.02         8.55 
TCGA-09-1675 TCGA-09-2043 TCGA-09-2045 TCGA-09-2048 TCGA-09-2050 TCGA-09-2051 
       97.55         6.15        35.15         4.50        71.11        63.09 
TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 
       39.75        20.91        26.93        12.46        54.31        25.91 
TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 
       81.47        18.48        33.24        32.28        11.70         3.88 
TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 
       35.41        35.80        15.12        24.59        44.55        39.58 
TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 
       12.39        31.07        15.19        17.79        55.17         2.47 
TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 
       11.18        11.38        11.54        31.04        21.40         8.42 
TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 
       36.72        28.70        30.35         8.71         7.79         8.12 
TCGA-13-0801 TCGA-13-0802 TCGA-13-0807 TCGA-13-0883 TCGA-13-0886 TCGA-13-0889 
        8.28         8.19        13.61        68.91        74.27        61.81 
TCGA-13-0891 TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 
       69.01        57.47        56.15        57.07        19.36        47.38 
TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 
       48.33        47.84        44.94        44.84        37.08        27.68 
TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 
       34.06        29.98        21.14         4.64         6.41         6.08 
TCGA-13-1403 TCGA-13-1404 TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 
       10.88         6.61         6.05         5.92         6.84         4.70 
TCGA-13-1411 TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 
        4.21        54.61        87.06        61.71        29.39        98.04 
TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 TCGA-13-1492 TCGA-13-1494 
       20.68        22.39        70.82        82.88        73.55        38.17 
TCGA-13-1495 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 
       49.22        37.61        38.37        13.97        32.84        16.57 
TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 
        4.21         4.41         4.77         4.14         2.56         3.88 
TCGA-13-1512 TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 
        3.09        10.78         8.75         6.28        23.05        25.94 
TCGA-20-0991 TCGA-20-0996 TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 
       26.20        72.20        19.07        16.67         2.93         2.66 
TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1029 TCGA-23-1030 
       40.54        15.39        26.83        31.73         8.81        29.10 
TCGA-23-1031 TCGA-23-1032 TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 TCGA-23-1116 
       18.87         2.24        54.51         3.22        31.20         4.57 
TCGA-23-1117 TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1124 
       33.30       129.96         4.27         6.38        39.09        58.13 
TCGA-23-1809 TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 
        0.53       115.89        87.48        91.66        77.00        49.84 
TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 TCGA-24-0975 
        2.76         4.70         4.50         7.63        19.63        21.80 
TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 
       41.56         7.66        22.32        54.08        63.55        47.41 
TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 TCGA-24-1422 TCGA-24-1423 
        6.31         6.38         7.82         7.99         0.76         6.25 
TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1434 TCGA-24-1435 
        5.95         5.36         4.80        17.36        18.67        43.53 
TCGA-24-1436 TCGA-24-1463 TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 
        8.55        72.92       105.99         9.11         3.42         1.18 
TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 TCGA-24-1549 TCGA-24-1550 
       22.19        26.96        57.37        64.27        56.58        41.06 
TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 
       51.91        41.39        58.09        88.50        70.62        39.88 
TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1603 
       44.09        45.50        47.70        25.87        10.26        90.15 
TCGA-24-1604 TCGA-24-1616 TCGA-24-1842 TCGA-24-1844 TCGA-24-1845 TCGA-24-1846 
       88.34        38.24         8.32         3.72         3.81         4.37 
TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 
       11.28         5.75         5.49        22.65        30.21        16.41 
TCGA-24-1928 TCGA-24-1930 TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 
       11.05        81.11       151.99        44.84        58.16        34.82 
TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 
      109.68        14.43        53.95        18.48        28.18        64.01 
TCGA-24-2038 TCGA-24-2260 TCGA-24-2262 TCGA-24-2267 TCGA-24-2281 TCGA-24-2288 
       44.48        36.16         0.36        47.54        44.58         0.82 
TCGA-24-2289 TCGA-24-2290 TCGA-24-2295 TCGA-24-2297 TCGA-24-2298 TCGA-25-1314 
       67.36        36.23        33.11        55.86        53.26        31.99 
TCGA-25-1315 TCGA-25-1316 TCGA-25-1318 TCGA-25-1319 TCGA-25-1321 TCGA-25-1322 
       51.06        37.02        34.98        65.00        33.96         2.99 
TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 
        2.96        18.58        18.02        15.78         0.36        20.58 
TCGA-25-1631 TCGA-25-1632 TCGA-25-1634 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 
        0.30        56.94        35.54        18.05        85.05        13.02 
TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 TCGA-25-2396 TCGA-25-2397 TCGA-25-2399 
       49.05         1.02        38.04         3.02        12.00        19.99 
TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 
        2.96        29.00        30.97        26.96        78.87        44.71 
TCGA-29-1691 TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1698 
       47.18       101.75        38.53         0.79        33.70        68.28 
TCGA-29-1699 TCGA-29-1701 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 
        0.53        16.90        59.67        18.25        41.95        29.23 
TCGA-29-1761 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 
       17.00        66.77        62.93        39.09        31.23        22.98 
TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 TCGA-29-1776 TCGA-29-1777 
       24.36        22.52        17.29        12.36        11.84        12.30 
TCGA-29-1781 TCGA-29-1785 TCGA-29-2425 TCGA-29-2427 TCGA-29-2429 TCGA-29-2431 
        8.35        34.62        65.00        62.47         4.87        42.25 
TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 
       11.84        11.47         9.76        38.07        51.91        36.26 
TCGA-30-1856 TCGA-30-1857 TCGA-30-1860 TCGA-30-1862 TCGA-30-1866 TCGA-30-1880 
       15.68         0.26        44.91         6.08        36.62        57.57 
TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 TCGA-31-1955 
       48.79        45.57        30.18        18.77        22.45        42.51 
TCGA-31-1956 TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 
       44.09        28.73        29.06        21.53        22.85        22.55 
TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 TCGA-36-1581 TCGA-36-2529 
       30.05        25.74        27.85        24.23        24.69        35.05 
TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2540 TCGA-36-2542 
       33.01        29.49        29.79        25.91        23.80        21.60 
TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 
        2.24        20.98        18.31        14.17         6.05        16.14 
TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 
       26.04        23.74         9.44         7.56         7.46        22.39 
TCGA-42-2593 TCGA-57-1582 TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 
        1.48        24.03        21.14         1.74        22.32        28.96 
TCGA-57-1993 TCGA-59-2349 TCGA-59-2350 TCGA-59-2354 TCGA-59-2355 TCGA-59-2372 
       25.05        80.12        22.32        34.39         2.14        44.78 
TCGA-61-1721 TCGA-61-1722 TCGA-61-1725 TCGA-61-1727 TCGA-61-1733 TCGA-61-1734 
       11.11         8.05        31.40        18.54        31.76        28.47 
TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 
       48.79        44.84        35.80         1.41         8.42         5.79 
TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 
       11.41        13.02         9.07        37.02        42.48        48.92 
TCGA-61-1914 TCGA-61-1915 TCGA-61-1918 TCGA-61-1919 TCGA-61-1995 TCGA-61-2000 
       56.58        67.73        15.75        38.17         1.97        14.50 
TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 
       17.98         3.98        30.61        39.85        30.64         1.18 
TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2095 
       45.96        45.40         4.80         4.77        51.72        61.64 
TCGA-61-2098 TCGA-61-2101 TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 
       65.49        55.50        20.68        44.52       125.72        22.22 
TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
        6.35        31.07         8.58 

  5P LOSS MUTATED 5P LOSS WILD-TYPE 
             0.79              0.26 
  5P LOSS MUTATED 5P LOSS WILD-TYPE 
           180.16            151.99 
  5P LOSS MUTATED 5P LOSS WILD-TYPE 
            28.49             27.88 
[1] "0.8 - 180.2 (28.5)" "0.3 - 152.0 (27.9)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED"   "5P LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "5P LOSS MUTATED"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED"   "5P LOSS MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED"   "5P LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "5P LOSS MUTATED"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED"   "5P LOSS MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED"   "5P LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "5P LOSS MUTATED"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED"   "5P LOSS MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"5P LOSS WILD-TYPE"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "5P LOSS MUTATED"   "5P LOSS MUTATED" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
  "5P LOSS MUTATED" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE"   "5P LOSS MUTATED"   "5P LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" "5P LOSS WILD-TYPE" 
[1] "hr=" "1"  
D49V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  5P LOSS MUTATED         1   125                0
  5P LOSS WILD-TYPE       1   423                2
D49V3, multiclass
                  clus
vv                 5P LOSS MUTATED 5P LOSS WILD-TYPE
  OMENTUM                        1                 1
  OVARY                        125               423
  PERITONEUM OVARY               0                 2
D49V4, continuous
D49V5, binary
                   cls
clus                  0   1
  5P LOSS MUTATED     0 128
  5P LOSS WILD-TYPE   3 431
[1] "tbl2"
                   cls
clus                [,1] [,2]
  5P LOSS MUTATED      0  128
  5P LOSS WILD-TYPE    3  431
     clus
vv    5P LOSS MUTATED 5P LOSS WILD-TYPE
  NO                0                 3
  YES             128               431
                   vv
clus                R0 R1 R2
  5P LOSS MUTATED    3  3  0
  5P LOSS WILD-TYPE 11 23  2
D49V6, multiclass
    clus
vv   5P LOSS MUTATED 5P LOSS WILD-TYPE
  R0               3                11
  R1               3                23
  R2               0                 2

Clustering(50) Variable = 5Q LOSS MUTATION ANALYSIS
D50V1, survival
                   sevent
clus2                 0   1
  5Q LOSS MUTATED   101 108
  5Q LOSS WILD-TYPE 160 178
  5Q LOSS MUTATED 5Q LOSS WILD-TYPE 
              209               338 
  5Q LOSS MUTATED 5Q LOSS WILD-TYPE 
              108               178 
$`5Q LOSS MUTATED`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1336 TCGA-04-1338 TCGA-04-1350 TCGA-04-1351 
       40.24        41.00        49.15        46.62        63.98        65.46 
TCGA-04-1356 TCGA-04-1361 TCGA-04-1371 TCGA-04-1517 TCGA-04-1646 TCGA-04-1648 
       49.28        32.52        82.36        19.99        27.88        28.64 
TCGA-04-1649 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0369 TCGA-09-1665 
       64.64        29.16         9.47        57.73        35.54        41.59 
TCGA-09-1669 TCGA-09-1674 TCGA-09-2043 TCGA-09-2044 TCGA-09-2049 TCGA-09-2054 
       30.48         8.55         6.15         6.12       112.37        20.91 
TCGA-10-0927 TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0723 TCGA-13-0724 
       81.47        19.86         6.21        24.59        39.58         2.73 
TCGA-13-0730 TCGA-13-0760 TCGA-13-0761 TCGA-13-0762 TCGA-13-0764 TCGA-13-0766 
       17.79        11.54        34.06        32.25        31.04        21.40 
TCGA-13-0791 TCGA-13-0793 TCGA-13-0794 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 
       38.93        28.70        30.35         8.28         8.19        43.82 
TCGA-13-0804 TCGA-13-0884 TCGA-13-0885 TCGA-13-0887 TCGA-13-0888 TCGA-13-0890 
       35.28       107.18        91.40        66.64        70.39        67.99 
TCGA-13-0891 TCGA-13-0893 TCGA-13-0899 TCGA-13-0901 TCGA-13-0904 TCGA-13-0906 
       69.01        43.36        56.15        19.36        48.33        44.94 
TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 TCGA-13-1405 TCGA-13-1407 TCGA-13-1411 
       21.14        14.89        13.81         7.36         6.05         4.21 
TCGA-13-1412 TCGA-13-1484 TCGA-13-1491 TCGA-13-1496 TCGA-13-1497 TCGA-13-1499 
        5.33        98.04        52.44         4.24        54.31        38.37 
TCGA-13-1505 TCGA-13-2057 TCGA-13-2059 TCGA-13-2060 TCGA-20-0990 TCGA-20-0991 
        4.21        14.24        12.23         8.58        25.94        26.20 
TCGA-20-1682 TCGA-20-1684 TCGA-20-1686 TCGA-23-1021 TCGA-23-1022 TCGA-23-1026 
       27.48        19.07         2.93        47.54        42.51        26.83 
TCGA-23-1028 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 
       49.41        29.10        18.87         2.24        51.35        54.51 
TCGA-23-1113 TCGA-23-1114 TCGA-23-1118 TCGA-23-1119 TCGA-23-1122 TCGA-23-1123 
       31.20        68.68        86.01       129.96        39.09        33.47 
TCGA-23-1124 TCGA-23-2072 TCGA-23-2077 TCGA-23-2643 TCGA-24-0970 TCGA-24-1419 
       58.13        24.95       115.89         4.70        11.64         7.86 
TCGA-24-1424 TCGA-24-1430 TCGA-24-1431 TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 
        6.02        28.34        19.17        12.46        45.14       105.99 
TCGA-24-1469 TCGA-24-1548 TCGA-24-1549 TCGA-24-1558 TCGA-24-1564 TCGA-24-1567 
        9.11        16.21        56.58        19.53        25.87        17.23 
TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 TCGA-24-1924 TCGA-24-1928 
       48.33        38.24         8.32         3.48        30.21        11.05 
TCGA-24-2019 TCGA-24-2020 TCGA-24-2026 TCGA-24-2030 TCGA-24-2254 TCGA-24-2260 
        4.87       151.99        34.82        53.95        57.07        36.16 
TCGA-24-2261 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2293 TCGA-24-2295 
        0.79        31.63        70.45        44.58        16.64        33.11 
TCGA-25-1312 TCGA-25-1313 TCGA-25-1315 TCGA-25-1317 TCGA-25-1318 TCGA-25-1320 
        1.02        26.93        51.06         1.02        34.98        36.95 
TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1626 TCGA-25-1630 TCGA-25-1633 
       33.96         2.99        12.00        15.78         7.86        60.59 
TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 TCGA-25-2396 TCGA-25-2398 TCGA-25-2400 
       51.22        14.93        24.99         3.02        45.01        42.02 
TCGA-25-2404 TCGA-29-1691 TCGA-29-1695 TCGA-29-1697 TCGA-29-1698 TCGA-29-1701 
       29.00        47.18         0.79        31.17        68.28        16.90 
TCGA-29-1702 TCGA-29-1711 TCGA-29-1762 TCGA-29-1764 TCGA-29-1766 TCGA-29-1775 
       18.64        34.62        85.68        62.93        39.09        12.36 
TCGA-29-1778 TCGA-29-1783 TCGA-29-1784 TCGA-29-2428 TCGA-30-1718 TCGA-30-1855 
       14.93         7.20         5.36        45.11        51.91         2.47 
TCGA-30-1859 TCGA-30-1861 TCGA-30-1866 TCGA-30-1867 TCGA-30-1887 TCGA-30-1891 
       48.07        34.78        36.62         1.18        24.26        30.05 
TCGA-31-1953 TCGA-31-1955 TCGA-31-1959 TCGA-36-1575 TCGA-36-1576 TCGA-36-1578 
        6.71        42.51         2.17         8.55        30.05        27.85 
TCGA-36-1581 TCGA-36-2537 TCGA-36-2538 TCGA-36-2547 TCGA-36-2552 TCGA-57-1582 
       24.69        25.91        25.08        20.52        11.47        24.03 
TCGA-57-1583 TCGA-57-1992 TCGA-57-1994 TCGA-59-2348 TCGA-59-2351 TCGA-59-2352 
       11.38        28.96        25.02       180.16       116.12         9.40 
TCGA-59-2363 TCGA-61-1722 TCGA-61-1724 TCGA-61-1728 TCGA-61-1730 TCGA-61-1734 
        5.39         8.05        20.94        27.88         4.34        28.47 
TCGA-61-1740 TCGA-61-1743 TCGA-61-1895 TCGA-61-1899 TCGA-61-1906 TCGA-61-1907 
        2.43        43.69         1.41         8.42        34.13        31.30 
TCGA-61-1917 TCGA-61-1919 TCGA-61-1998 TCGA-61-2008 TCGA-61-2012 TCGA-61-2088 
       43.43        38.17         5.52        30.61        30.64         4.77 
TCGA-61-2094 TCGA-61-2096 TCGA-61-2097 TCGA-61-2102 TCGA-61-2104 
       71.74        58.39        60.62         6.48        76.83 

$`5Q LOSS WILD-TYPE`
TCGA-04-1335 TCGA-04-1337 TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 
        1.81         2.01        18.51        11.87        65.49        63.06 
TCGA-04-1348 TCGA-04-1349 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 
       48.76        21.57        44.32        33.67        76.54        71.47 
TCGA-04-1514 TCGA-04-1516 TCGA-04-1525 TCGA-04-1530 TCGA-04-1536 TCGA-04-1542 
       56.55        41.59        38.37       119.08        29.06        84.20 
TCGA-04-1638 TCGA-04-1644 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 TCGA-04-1655 
       55.40        48.89        36.23        31.86        47.70        45.34 
TCGA-09-0367 TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1666 
       17.95         9.96        38.43        89.33        74.89        57.57 
TCGA-09-1667 TCGA-09-1668 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 TCGA-09-1675 
       61.87        55.36        17.98         5.85         3.02        97.55 
TCGA-09-2045 TCGA-09-2048 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 TCGA-09-2055 
       35.15         4.50        71.11        63.09        39.75        26.93 
TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 
       12.46        54.31        25.91        18.48        33.24        32.28 
TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-13-0720 
       11.70         3.88        35.41        35.80        15.12        44.55 
TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0751 TCGA-13-0755 TCGA-13-0757 
       12.39        31.07        15.19        55.17         2.47        11.18 
TCGA-13-0758 TCGA-13-0768 TCGA-13-0792 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 
       11.38         8.42        36.72        19.56         8.71         7.79 
TCGA-13-0800 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0886 TCGA-13-0889 
        8.12        35.28        13.61        68.91        74.27        61.81 
TCGA-13-0897 TCGA-13-0900 TCGA-13-0903 TCGA-13-0905 TCGA-13-0908 TCGA-13-0910 
       57.47        57.07        47.38        47.84        44.84        37.08 
TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 
       27.68        34.06        29.98         4.64         6.41         6.08 
TCGA-13-1403 TCGA-13-1404 TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 TCGA-13-1477 
       10.88         6.61         5.92         6.84         4.70        54.61 
TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 
       87.06        61.71        29.39        20.68        22.39        70.82 
TCGA-13-1489 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1498 TCGA-13-1500 
       82.88        73.55        38.17        49.22        37.61        13.97 
TCGA-13-1501 TCGA-13-1504 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 
       32.84        16.57         4.41         4.77         4.14         2.56 
TCGA-13-1511 TCGA-13-1512 TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 
        3.88         3.09        10.78         8.75         6.28        23.05 
TCGA-20-0996 TCGA-20-1683 TCGA-20-1685 TCGA-20-1687 TCGA-23-1023 TCGA-23-1024 
       72.20        25.38        16.67         2.66        40.54        15.39 
TCGA-23-1027 TCGA-23-1029 TCGA-23-1111 TCGA-23-1116 TCGA-23-1117 TCGA-23-1120 
       31.73         8.81         3.22         4.57        33.30         4.27 
TCGA-23-1121 TCGA-23-1809 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 
        6.38         0.53        87.48        91.66        77.00        49.84 
TCGA-23-2641 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 TCGA-24-0975 TCGA-24-0979 
        2.76         4.50         7.63        19.63        21.80        41.56 
TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 
        7.66        22.32        54.08        63.55        47.41         6.31 
TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 TCGA-24-1422 TCGA-24-1423 TCGA-24-1425 
        6.38         7.82         7.99         0.76         6.25         5.95 
TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 
        5.36         4.80        17.36        18.67        43.53         8.55 
TCGA-24-1463 TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 
       72.92         3.42         1.18        22.19        26.96        57.37 
TCGA-24-1546 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 
       64.27        41.06        51.91        41.39        58.09        88.50 
TCGA-24-1556 TCGA-24-1557 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1565 
       70.62        39.88        44.09        45.50        47.70        10.26 
TCGA-24-1603 TCGA-24-1604 TCGA-24-1844 TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 
       90.15        88.34         3.72         3.81         4.37        11.28 
TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 TCGA-24-1927 TCGA-24-1930 
        5.75         5.49         9.80        22.65        16.41        81.11 
TCGA-24-2023 TCGA-24-2024 TCGA-24-2027 TCGA-24-2029 TCGA-24-2033 TCGA-24-2035 
       44.84        58.16       109.68        14.43        18.48        28.18 
TCGA-24-2036 TCGA-24-2038 TCGA-24-2262 TCGA-24-2267 TCGA-24-2288 TCGA-24-2289 
       64.01        44.48         0.36        47.54         0.82        67.36 
TCGA-24-2290 TCGA-24-2297 TCGA-24-2298 TCGA-25-1314 TCGA-25-1316 TCGA-25-1319 
       36.23        55.86        53.26        31.99        37.02        65.00 
TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 TCGA-25-1627 TCGA-25-1628 TCGA-25-1631 
        2.96        18.58        18.02         0.36        20.58         0.30 
TCGA-25-1632 TCGA-25-1634 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 
       56.94        35.54        18.05        85.05        13.02        49.05 
TCGA-25-2392 TCGA-25-2393 TCGA-25-2397 TCGA-25-2399 TCGA-25-2401 TCGA-25-2408 
        1.02        38.04        12.00        19.99         2.96        30.97 
TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1693 TCGA-29-1694 TCGA-29-1696 
       26.96        78.87        44.71       101.75        38.53        33.70 
TCGA-29-1699 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1761 
        0.53        59.67        18.25        41.95        29.23        17.00 
TCGA-29-1763 TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 
       66.77        31.23        22.98        24.36        22.52        17.29 
TCGA-29-1776 TCGA-29-1777 TCGA-29-1781 TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 
       11.84        12.30         8.35        34.62        86.17        65.00 
TCGA-29-2427 TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 
       62.47         4.87        42.25        11.84        11.47         9.76 
TCGA-30-1714 TCGA-30-1853 TCGA-30-1856 TCGA-30-1857 TCGA-30-1860 TCGA-30-1862 
       38.07        36.26        15.68         0.26        44.91         6.08 
TCGA-30-1880 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 
       57.57        48.79        45.57        30.18        18.77        22.45 
TCGA-31-1956 TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 
       44.09        28.73        29.06        21.53        22.85        22.55 
TCGA-36-1577 TCGA-36-1580 TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 
       25.74        24.23        35.05        33.01        29.49        29.79 
TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2548 
       23.80        21.60         2.24        20.98        18.31        14.17 
TCGA-36-2549 TCGA-36-2551 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 TCGA-42-2589 
        6.05        16.14        26.04        23.74         9.44         7.56 
TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 
        7.46        22.39         1.48        21.14         1.74        22.32 
TCGA-57-1993 TCGA-59-2349 TCGA-59-2350 TCGA-59-2354 TCGA-59-2355 TCGA-59-2372 
       25.05        80.12        22.32        34.39         2.14        44.78 
TCGA-61-1721 TCGA-61-1725 TCGA-61-1727 TCGA-61-1733 TCGA-61-1736 TCGA-61-1737 
       11.11        31.40        18.54        31.76        48.79        44.84 
TCGA-61-1738 TCGA-61-1741 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 
       35.80        33.67         5.79        11.41        13.02         9.07 
TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 TCGA-61-1918 
       37.02        42.48        48.92        56.58        67.73        15.75 
TCGA-61-1995 TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 TCGA-61-2009 TCGA-61-2016 
        1.97        14.50        17.98         3.98        39.85         1.18 
TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2092 TCGA-61-2095 TCGA-61-2098 
       45.96        45.40         4.80        51.72        61.64        65.49 
TCGA-61-2101 TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 
       55.50        20.68        44.52       125.72        22.22         6.35 
TCGA-61-2613 TCGA-61-2614 
       31.07         8.58 

  5Q LOSS MUTATED 5Q LOSS WILD-TYPE 
             0.79              0.26 
  5Q LOSS MUTATED 5Q LOSS WILD-TYPE 
           180.16            125.72 
  5Q LOSS MUTATED 5Q LOSS WILD-TYPE 
           29.000            25.975 
[1] "0.8 - 180.2 (29.0)" "0.3 - 125.7 (26.0)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "5Q LOSS MUTATED"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
  "5Q LOSS MUTATED" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE"   "5Q LOSS MUTATED"   "5Q LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" "5Q LOSS WILD-TYPE" 
[1] "hr=" "1.1"
D50V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  5Q LOSS MUTATED         1   210                1
  5Q LOSS WILD-TYPE       1   338                1
D50V3, multiclass
                  clus
vv                 5Q LOSS MUTATED 5Q LOSS WILD-TYPE
  OMENTUM                        1                 1
  OVARY                        210               338
  PERITONEUM OVARY               1                 1
D50V4, continuous
D50V5, binary
                   cls
clus                  0   1
  5Q LOSS MUTATED     1 214
  5Q LOSS WILD-TYPE   2 345
[1] "tbl2"
                   cls
clus                [,1] [,2]
  5Q LOSS MUTATED      1  214
  5Q LOSS WILD-TYPE    2  345
     clus
vv    5Q LOSS MUTATED 5Q LOSS WILD-TYPE
  NO                1                 2
  YES             214               345
                   vv
clus                R0 R1 R2
  5Q LOSS MUTATED    3  3  0
  5Q LOSS WILD-TYPE 11 23  2
D50V6, multiclass
    clus
vv   5Q LOSS MUTATED 5Q LOSS WILD-TYPE
  R0               3                11
  R1               3                23
  R2               0                 2

Clustering(51) Variable = 6P LOSS MUTATION ANALYSIS
D51V1, survival
                   sevent
clus2                 0   1
  6P LOSS MUTATED    79  78
  6P LOSS WILD-TYPE 182 208
  6P LOSS MUTATED 6P LOSS WILD-TYPE 
              157               390 
  6P LOSS MUTATED 6P LOSS WILD-TYPE 
               78               208 
$`6P LOSS MUTATED`
TCGA-04-1331 TCGA-04-1348 TCGA-04-1351 TCGA-04-1367 TCGA-04-1646 TCGA-04-1649 
       40.24        48.76        65.46        71.47        27.88        64.64 
TCGA-04-1651 TCGA-04-1655 TCGA-09-0365 TCGA-09-0369 TCGA-09-1659 TCGA-09-1670 
       36.23        45.34         9.47        35.54         9.96        17.98 
TCGA-09-1672 TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2053 TCGA-09-2056 
        5.85        97.55         6.15         6.12        39.75        12.46 
TCGA-10-0925 TCGA-10-0926 TCGA-13-0720 TCGA-13-0730 TCGA-13-0751 TCGA-13-0757 
       54.31        25.91        44.55        17.79        55.17        11.18 
TCGA-13-0758 TCGA-13-0762 TCGA-13-0766 TCGA-13-0801 TCGA-13-0803 TCGA-13-0883 
       11.38        32.25        21.40         8.28        43.82        68.91 
TCGA-13-0884 TCGA-13-0887 TCGA-13-0888 TCGA-13-0890 TCGA-13-0891 TCGA-13-0897 
      107.18        66.64        70.39        67.99        69.01        57.47 
TCGA-13-0899 TCGA-13-0900 TCGA-13-0905 TCGA-13-0910 TCGA-13-0911 TCGA-13-0919 
       56.15        57.07        47.84        37.08        27.68        14.89 
TCGA-13-0921 TCGA-13-0924 TCGA-13-1405 TCGA-13-1410 TCGA-13-1411 TCGA-13-1483 
        4.64         6.08         7.36         4.70         4.21        29.39 
TCGA-13-1484 TCGA-13-1491 TCGA-13-1495 TCGA-13-1497 TCGA-13-1501 TCGA-13-1505 
       98.04        52.44        49.22        54.31        32.84         4.21 
TCGA-13-1506 TCGA-13-1512 TCGA-13-2059 TCGA-20-1683 TCGA-23-1021 TCGA-23-1030 
        4.41         3.09        12.23        25.38        47.54        29.10 
TCGA-23-1113 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 TCGA-23-1122 TCGA-23-1123 
       31.20        33.30        86.01       129.96        39.09        33.47 
TCGA-23-2072 TCGA-23-2078 TCGA-23-2641 TCGA-23-2643 TCGA-24-0966 TCGA-24-0970 
       24.95        87.48         2.76         4.70         7.63        11.64 
TCGA-24-1416 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1434 TCGA-24-1435 
        6.38         5.36         4.80        17.36        18.67        43.53 
TCGA-24-1467 TCGA-24-1471 TCGA-24-1546 TCGA-24-1552 TCGA-24-1553 TCGA-24-1560 
      105.99         1.18        64.27        41.39        58.09        44.09 
TCGA-24-1845 TCGA-24-1849 TCGA-24-1923 TCGA-24-1927 TCGA-24-1928 TCGA-24-2019 
        3.81         5.75        22.65        16.41        11.05         4.87 
TCGA-24-2027 TCGA-24-2029 TCGA-24-2271 TCGA-24-2280 TCGA-24-2293 TCGA-24-2297 
      109.68        14.43        31.63        70.45        16.64        55.86 
TCGA-24-2298 TCGA-25-1313 TCGA-25-1315 TCGA-25-1316 TCGA-25-1320 TCGA-25-1322 
       53.26        26.93        51.06        37.02        36.95         2.99 
TCGA-25-1329 TCGA-25-1627 TCGA-25-1628 TCGA-25-1635 TCGA-25-2396 TCGA-25-2399 
        2.96         0.36        20.58        51.22         3.02        19.99 
TCGA-29-1688 TCGA-29-1693 TCGA-29-1694 TCGA-29-1696 TCGA-29-1697 TCGA-29-1707 
       78.87       101.75        38.53        33.70        31.17        41.95 
TCGA-29-1763 TCGA-29-1775 TCGA-29-1781 TCGA-29-1784 TCGA-29-2428 TCGA-30-1714 
       66.77        12.36         8.35         5.36        45.11        38.07 
TCGA-30-1853 TCGA-30-1855 TCGA-30-1857 TCGA-30-1859 TCGA-30-1866 TCGA-30-1880 
       36.26         2.47         0.26        48.07        36.62        57.57 
TCGA-31-1951 TCGA-36-1569 TCGA-36-2543 TCGA-36-2547 TCGA-36-2548 TCGA-42-2588 
       22.45        29.06         2.24        20.52        14.17         9.44 
TCGA-42-2591 TCGA-59-2350 TCGA-59-2351 TCGA-59-2355 TCGA-59-2372 TCGA-61-1724 
       22.39        22.32       116.12         2.14        44.78        20.94 
TCGA-61-1727 TCGA-61-1728 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 TCGA-61-1738 
       18.54        27.88        31.76        28.47        48.79        35.80 
TCGA-61-1740 TCGA-61-1895 TCGA-61-1899 TCGA-61-1904 TCGA-61-1906 TCGA-61-1910 
        2.43         1.41         8.42         9.07        34.13        37.02 
TCGA-61-1913 TCGA-61-1914 TCGA-61-1995 TCGA-61-2008 TCGA-61-2096 TCGA-61-2110 
       48.92        56.58         1.97        30.61        58.39        44.52 
TCGA-61-2613 
       31.07 

$`6P LOSS WILD-TYPE`
TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 TCGA-04-1342 
       41.00         1.81        49.15         2.01        46.62        18.51 
TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1349 TCGA-04-1350 TCGA-04-1356 
       11.87        65.49        63.06        21.57        63.98        49.28 
TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1371 TCGA-04-1514 
       32.52        44.32        33.67        76.54        82.36        56.55 
TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 TCGA-04-1530 TCGA-04-1536 TCGA-04-1542 
       41.59        19.99        38.37       119.08        29.06        84.20 
TCGA-04-1638 TCGA-04-1644 TCGA-04-1648 TCGA-04-1652 TCGA-04-1654 TCGA-09-0364 
       55.40        48.89        28.64        31.86        47.70        29.16 
TCGA-09-0366 TCGA-09-0367 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 
       57.73        17.95        38.43        89.33        74.89        41.59 
TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 TCGA-09-1673 TCGA-09-1674 
       57.57        61.87        55.36        30.48         3.02         8.55 
TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 TCGA-09-2054 
       35.15         4.50       112.37        71.11        63.09        20.91 
TCGA-09-2055 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 TCGA-10-0933 
       26.93        81.47        18.48        33.24        32.28        11.70 
TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 
        3.88        35.41        35.80        15.12        19.86         6.21 
TCGA-13-0717 TCGA-13-0723 TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 
       24.59        39.58         2.73        12.39        31.07        15.19 
TCGA-13-0755 TCGA-13-0760 TCGA-13-0761 TCGA-13-0764 TCGA-13-0768 TCGA-13-0791 
        2.47        11.54        34.06        31.04         8.42        38.93 
TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 
       36.72        28.70        30.35        19.56         8.71         7.79 
TCGA-13-0800 TCGA-13-0802 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 TCGA-13-0885 
        8.12         8.19        35.28        35.28        13.61        91.40 
TCGA-13-0886 TCGA-13-0889 TCGA-13-0893 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 
       74.27        61.81        43.36        19.36        47.38        48.33 
TCGA-13-0906 TCGA-13-0908 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0920 
       44.94        44.84        34.06        29.98        21.14        13.81 
TCGA-13-0923 TCGA-13-1403 TCGA-13-1404 TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 
        6.41        10.88         6.61         6.05         5.92         6.84 
TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 TCGA-13-1485 TCGA-13-1487 
        5.33        54.61        87.06        61.71        20.68        22.39 
TCGA-13-1488 TCGA-13-1489 TCGA-13-1492 TCGA-13-1494 TCGA-13-1496 TCGA-13-1498 
       70.82        82.88        73.55        38.17         4.24        37.61 
TCGA-13-1499 TCGA-13-1500 TCGA-13-1504 TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 
       38.37        13.97        16.57         4.77         4.14         2.56 
TCGA-13-1511 TCGA-13-2057 TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 
        3.88        14.24         8.58        10.78         8.75         6.28 
TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 TCGA-20-1684 
       23.05        25.94        26.20        72.20        27.48        19.07 
TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 
       16.67         2.93         2.66        42.51        40.54        15.39 
TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1031 TCGA-23-1032 
       26.83        31.73        49.41         8.81        18.87         2.24 
TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 TCGA-23-1114 TCGA-23-1116 TCGA-23-1120 
       51.35        54.51         3.22        68.68         4.57         4.27 
TCGA-23-1121 TCGA-23-1124 TCGA-23-1809 TCGA-23-2077 TCGA-23-2079 TCGA-23-2081 
        6.38        58.13         0.53       115.89        91.66        77.00 
TCGA-23-2084 TCGA-23-2645 TCGA-24-0968 TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 
       49.84         4.50        19.63        21.80        41.56         7.66 
TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 TCGA-24-1417 
       22.32        54.08        63.55        47.41         6.31         7.82 
TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 
        7.99         7.86         0.76         6.25         6.02         5.95 
TCGA-24-1430 TCGA-24-1431 TCGA-24-1436 TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 
       28.34        19.17         8.55        72.92        12.46        45.14 
TCGA-24-1469 TCGA-24-1470 TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1548 
        9.11         3.42        22.19        26.96        57.37        16.21 
TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 
       56.58        41.06        51.91        88.50        70.62        39.88 
TCGA-24-1558 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 
       19.53        45.50        47.70        25.87        10.26        17.23 
TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 
       90.15        88.34        48.33        38.24         8.32         3.48 
TCGA-24-1844 TCGA-24-1846 TCGA-24-1847 TCGA-24-1850 TCGA-24-1920 TCGA-24-1924 
        3.72         4.37        11.28         5.49         9.80        30.21 
TCGA-24-1930 TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2030 
       81.11       151.99        44.84        58.16        34.82        53.95 
TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 
       18.48        28.18        64.01        44.48        57.07        36.16 
TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 
        0.79         0.36        47.54        44.58         0.82        67.36 
TCGA-24-2290 TCGA-24-2295 TCGA-25-1312 TCGA-25-1314 TCGA-25-1317 TCGA-25-1318 
       36.23        33.11         1.02        31.99         1.02        34.98 
TCGA-25-1319 TCGA-25-1321 TCGA-25-1323 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 
       65.00        33.96        12.00        18.58        18.02        15.78 
TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 TCGA-25-1870 
        7.86         0.30        56.94        60.59        35.54        14.93 
TCGA-25-1871 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 
       24.99        18.05        85.05        13.02        49.05         1.02 
TCGA-25-2393 TCGA-25-2397 TCGA-25-2398 TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 
       38.04        12.00        45.01        42.02         2.96        29.00 
TCGA-25-2408 TCGA-25-2409 TCGA-29-1690 TCGA-29-1691 TCGA-29-1695 TCGA-29-1698 
       30.97        26.96        44.71        47.18         0.79        68.28 
TCGA-29-1699 TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1710 
        0.53        16.90        18.64        59.67        18.25        29.23 
TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 
       34.62        17.00        85.68        62.93        39.09        31.23 
TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 TCGA-29-1776 TCGA-29-1777 
       22.98        24.36        22.52        17.29        11.84        12.30 
TCGA-29-1778 TCGA-29-1783 TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 
       14.93         7.20        34.62        86.17        65.00        62.47 
TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 TCGA-30-1718 
        4.87        42.25        11.84        11.47         9.76        51.91 
TCGA-30-1856 TCGA-30-1860 TCGA-30-1861 TCGA-30-1862 TCGA-30-1867 TCGA-30-1887 
       15.68        44.91        34.78         6.08         1.18        24.26 
TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1953 
       30.05        48.79        45.57        30.18        18.77         6.71 
TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1570 TCGA-36-1571 
       42.51        44.09         2.17        28.73        21.53        22.85 
TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 
       22.55         8.55        30.05        25.74        27.85        24.23 
TCGA-36-1581 TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 
       24.69        35.05        33.01        29.49        29.79        25.91 
TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2544 TCGA-36-2545 TCGA-36-2549 
       25.08        23.80        21.60        20.98        18.31         6.05 
TCGA-36-2551 TCGA-36-2552 TCGA-42-2582 TCGA-42-2587 TCGA-42-2589 TCGA-42-2590 
       16.14        11.47        26.04        23.74         7.56         7.46 
TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 
        1.48        24.03        11.38        21.14         1.74        22.32 
TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2352 
       28.96        25.05        25.02       180.16        80.12         9.40 
TCGA-59-2354 TCGA-59-2363 TCGA-61-1721 TCGA-61-1722 TCGA-61-1725 TCGA-61-1730 
       34.39         5.39        11.11         8.05        31.40         4.34 
TCGA-61-1737 TCGA-61-1741 TCGA-61-1743 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 
       44.84        33.67        43.69         5.79        11.41        13.02 
TCGA-61-1907 TCGA-61-1911 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 
       31.30        42.48        67.73        43.43        15.75        38.17 
TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 TCGA-61-2009 TCGA-61-2012 
        5.52        14.50        17.98         3.98        39.85        30.64 
TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 
        1.18        45.96        45.40         4.80         4.77        51.72 
TCGA-61-2094 TCGA-61-2095 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 
       71.74        61.64        60.62        65.49        55.50         6.48 
TCGA-61-2104 TCGA-61-2109 TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 TCGA-61-2614 
       76.83        20.68       125.72        22.22         6.35         8.58 

  6P LOSS MUTATED 6P LOSS WILD-TYPE 
             0.26              0.30 
  6P LOSS MUTATED 6P LOSS WILD-TYPE 
           129.96            180.16 
  6P LOSS MUTATED 6P LOSS WILD-TYPE 
            31.07             26.88 
[1] "0.3 - 130.0 (31.1)" "0.3 - 180.2 (26.9)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED"   "6P LOSS MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "6P LOSS MUTATED" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
  "6P LOSS MUTATED"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" "6P LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"6P LOSS WILD-TYPE"   "6P LOSS MUTATED" "6P LOSS WILD-TYPE" 
[1] "hr=" "1.2"
D51V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  6P LOSS MUTATED         1   158                0
  6P LOSS WILD-TYPE       1   390                2
D51V3, multiclass
                  clus
vv                 6P LOSS MUTATED 6P LOSS WILD-TYPE
  OMENTUM                        1                 1
  OVARY                        158               390
  PERITONEUM OVARY               0                 2
D51V4, continuous
D51V5, binary
                   cls
clus                  0   1
  6P LOSS MUTATED     1 161
  6P LOSS WILD-TYPE   2 398
[1] "tbl2"
                   cls
clus                [,1] [,2]
  6P LOSS MUTATED      1  161
  6P LOSS WILD-TYPE    2  398
     clus
vv    6P LOSS MUTATED 6P LOSS WILD-TYPE
  NO                1                 2
  YES             161               398
                   vv
clus                R0 R1 R2
  6P LOSS MUTATED    2  5  1
  6P LOSS WILD-TYPE 12 21  1
D51V6, multiclass
    clus
vv   6P LOSS MUTATED 6P LOSS WILD-TYPE
  R0               2                12
  R1               5                21
  R2               1                 1

Clustering(52) Variable = 6Q LOSS MUTATION ANALYSIS
D52V1, survival
                   sevent
clus2                 0   1
  6Q LOSS MUTATED   106 124
  6Q LOSS WILD-TYPE 155 162
  6Q LOSS MUTATED 6Q LOSS WILD-TYPE 
              230               317 
  6Q LOSS MUTATED 6Q LOSS WILD-TYPE 
              124               162 
$`6Q LOSS MUTATED`
TCGA-04-1331 TCGA-04-1337 TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 TCGA-04-1351 
       40.24         2.01        48.76        21.57        63.98        65.46 
TCGA-04-1367 TCGA-04-1517 TCGA-04-1525 TCGA-04-1646 TCGA-04-1649 TCGA-04-1651 
       71.47        19.99        38.37        27.88        64.64        36.23 
TCGA-04-1655 TCGA-09-0365 TCGA-09-0367 TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 
       45.34         9.47        17.95        35.54         9.96        38.43 
TCGA-09-1662 TCGA-09-1670 TCGA-09-1672 TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 
       89.33        17.98         5.85        97.55         6.15         6.12 
TCGA-09-2045 TCGA-09-2053 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 
       35.15        39.75        26.93        12.46        54.31        25.91 
TCGA-10-0927 TCGA-10-0935 TCGA-10-0938 TCGA-13-0717 TCGA-13-0726 TCGA-13-0751 
       81.47        35.41        19.86        24.59        31.07        55.17 
TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 TCGA-13-0762 TCGA-13-0766 TCGA-13-0793 
        2.47        11.18        11.38        32.25        21.40        28.70 
TCGA-13-0799 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0883 TCGA-13-0884 
        7.79         8.28         8.19        43.82        68.91       107.18 
TCGA-13-0887 TCGA-13-0888 TCGA-13-0890 TCGA-13-0891 TCGA-13-0897 TCGA-13-0899 
       66.64        70.39        67.99        69.01        57.47        56.15 
TCGA-13-0900 TCGA-13-0905 TCGA-13-0910 TCGA-13-0911 TCGA-13-0919 TCGA-13-0921 
       57.07        47.84        37.08        27.68        14.89         4.64 
TCGA-13-0924 TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 TCGA-13-1410 TCGA-13-1411 
        6.08         6.61         7.36         6.05         4.70         4.21 
TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1491 TCGA-13-1495 
       87.06        61.71        29.39        98.04        52.44        49.22 
TCGA-13-1497 TCGA-13-1501 TCGA-13-1505 TCGA-13-1506 TCGA-13-1512 TCGA-13-2059 
       54.31        32.84         4.21         4.41         3.09        12.23 
TCGA-20-0990 TCGA-20-1683 TCGA-20-1686 TCGA-23-1021 TCGA-23-1027 TCGA-23-1029 
       25.94        25.38         2.93        47.54        31.73         8.81 
TCGA-23-1030 TCGA-23-1109 TCGA-23-1113 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 
       29.10        51.35        31.20        33.30        86.01       129.96 
TCGA-23-1122 TCGA-23-1123 TCGA-23-2072 TCGA-23-2078 TCGA-23-2084 TCGA-23-2641 
       39.09        33.47        24.95        87.48        49.84         2.76 
TCGA-23-2643 TCGA-24-0966 TCGA-24-0970 TCGA-24-0980 TCGA-24-0982 TCGA-24-1105 
        4.70         7.63        11.64         7.66        22.32        47.41 
TCGA-24-1416 TCGA-24-1417 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1434 
        6.38         7.82         5.36         4.80        17.36        18.67 
TCGA-24-1435 TCGA-24-1467 TCGA-24-1471 TCGA-24-1546 TCGA-24-1552 TCGA-24-1553 
       43.53       105.99         1.18        64.27        41.39        58.09 
TCGA-24-1560 TCGA-24-1562 TCGA-24-1564 TCGA-24-1844 TCGA-24-1845 TCGA-24-1849 
       44.09        45.50        25.87         3.72         3.81         5.75 
TCGA-24-1923 TCGA-24-1927 TCGA-24-2019 TCGA-24-2020 TCGA-24-2029 TCGA-24-2261 
       22.65        16.41         4.87       151.99        14.43         0.79 
TCGA-24-2262 TCGA-24-2271 TCGA-24-2280 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 
        0.36        31.63        70.45        36.23        16.64        33.11 
TCGA-24-2297 TCGA-24-2298 TCGA-25-1313 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 
       55.86        53.26        26.93        51.06        37.02         1.02 
TCGA-25-1318 TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 
       34.98        36.95        33.96         2.99        12.00         2.96 
TCGA-25-1627 TCGA-25-1628 TCGA-25-1634 TCGA-25-1878 TCGA-25-2042 TCGA-25-2396 
        0.36        20.58        35.54        85.05        13.02         3.02 
TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2409 TCGA-29-1688 TCGA-29-1693 
       12.00        45.01        19.99        26.96        78.87       101.75 
TCGA-29-1694 TCGA-29-1696 TCGA-29-1697 TCGA-29-1707 TCGA-29-1762 TCGA-29-1763 
       38.53        33.70        31.17        41.95        85.68        66.77 
TCGA-29-1768 TCGA-29-1769 TCGA-29-1771 TCGA-29-1775 TCGA-29-1781 TCGA-29-1784 
       31.23        22.98        22.52        12.36         8.35         5.36 
TCGA-29-2428 TCGA-29-2432 TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 TCGA-30-1855 
       45.11        11.84        38.07        51.91        36.26         2.47 
TCGA-30-1857 TCGA-30-1859 TCGA-30-1866 TCGA-30-1880 TCGA-31-1951 TCGA-31-1953 
        0.26        48.07        36.62        57.57        22.45         6.71 
TCGA-31-1956 TCGA-31-1959 TCGA-36-1569 TCGA-36-1571 TCGA-36-1574 TCGA-36-1580 
       44.09         2.17        29.06        22.85        22.55        24.23 
TCGA-36-2542 TCGA-36-2543 TCGA-36-2545 TCGA-36-2547 TCGA-36-2548 TCGA-42-2588 
       21.60         2.24        18.31        20.52        14.17         9.44 
TCGA-42-2589 TCGA-42-2591 TCGA-57-1583 TCGA-57-1584 TCGA-59-2350 TCGA-59-2351 
        7.56        22.39        11.38        21.14        22.32       116.12 
TCGA-59-2355 TCGA-59-2372 TCGA-61-1724 TCGA-61-1727 TCGA-61-1728 TCGA-61-1730 
        2.14        44.78        20.94        18.54        27.88         4.34 
TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 
       31.76        28.47        48.79        44.84        35.80         2.43 
TCGA-61-1895 TCGA-61-1899 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 TCGA-61-1910 
        1.41         8.42        13.02         9.07        34.13        37.02 
TCGA-61-1913 TCGA-61-1914 TCGA-61-1918 TCGA-61-1995 TCGA-61-1998 TCGA-61-2002 
       48.92        56.58        15.75         1.97         5.52        17.98 
TCGA-61-2008 TCGA-61-2096 TCGA-61-2097 TCGA-61-2101 TCGA-61-2104 TCGA-61-2110 
       30.61        58.39        60.62        55.50        76.83        44.52 
TCGA-61-2613 TCGA-61-2614 
       31.07         8.58 

$`6Q LOSS WILD-TYPE`
TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1338 TCGA-04-1342 TCGA-04-1343 
       41.00         1.81        49.15        46.62        18.51        11.87 
TCGA-04-1346 TCGA-04-1347 TCGA-04-1356 TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 
       65.49        63.06        49.28        32.52        44.32        33.67 
TCGA-04-1365 TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 TCGA-04-1530 TCGA-04-1536 
       76.54        82.36        56.55        41.59       119.08        29.06 
TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 TCGA-04-1648 TCGA-04-1652 TCGA-04-1654 
       84.20        55.40        48.89        28.64        31.86        47.70 
TCGA-09-0364 TCGA-09-0366 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 
       29.16        57.73        74.89        41.59        57.57        61.87 
TCGA-09-1668 TCGA-09-1669 TCGA-09-1673 TCGA-09-1674 TCGA-09-2048 TCGA-09-2049 
       55.36        30.48         3.02         8.55         4.50       112.37 
TCGA-09-2050 TCGA-09-2051 TCGA-09-2054 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 
       71.11        63.09        20.91        18.48        33.24        32.28 
TCGA-10-0933 TCGA-10-0934 TCGA-10-0936 TCGA-10-0937 TCGA-13-0714 TCGA-13-0720 
       11.70         3.88        35.80        15.12         6.21        44.55 
TCGA-13-0723 TCGA-13-0724 TCGA-13-0725 TCGA-13-0727 TCGA-13-0730 TCGA-13-0760 
       39.58         2.73        12.39        15.19        17.79        11.54 
TCGA-13-0761 TCGA-13-0764 TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0794 
       34.06        31.04         8.42        38.93        36.72        30.35 
TCGA-13-0795 TCGA-13-0797 TCGA-13-0800 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 
       19.56         8.71         8.12        35.28        35.28        13.61 
TCGA-13-0885 TCGA-13-0886 TCGA-13-0889 TCGA-13-0893 TCGA-13-0901 TCGA-13-0903 
       91.40        74.27        61.81        43.36        19.36        47.38 
TCGA-13-0904 TCGA-13-0906 TCGA-13-0908 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 
       48.33        44.94        44.84        34.06        29.98        21.14 
TCGA-13-0920 TCGA-13-0923 TCGA-13-1403 TCGA-13-1408 TCGA-13-1409 TCGA-13-1412 
       13.81         6.41        10.88         5.92         6.84         5.33 
TCGA-13-1477 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 TCGA-13-1492 
       54.61        20.68        22.39        70.82        82.88        73.55 
TCGA-13-1494 TCGA-13-1496 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1504 
       38.17         4.24        37.61        38.37        13.97        16.57 
TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-2057 TCGA-13-2060 
        4.77         4.14         2.56         3.88        14.24         8.58 
TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 TCGA-20-0991 TCGA-20-0996 
       10.78         8.75         6.28        23.05        26.20        72.20 
TCGA-20-1682 TCGA-20-1684 TCGA-20-1685 TCGA-20-1687 TCGA-23-1022 TCGA-23-1023 
       27.48        19.07        16.67         2.66        42.51        40.54 
TCGA-23-1024 TCGA-23-1026 TCGA-23-1028 TCGA-23-1031 TCGA-23-1032 TCGA-23-1110 
       15.39        26.83        49.41        18.87         2.24        54.51 
TCGA-23-1111 TCGA-23-1114 TCGA-23-1116 TCGA-23-1120 TCGA-23-1121 TCGA-23-1124 
        3.22        68.68         4.57         4.27         6.38        58.13 
TCGA-23-1809 TCGA-23-2077 TCGA-23-2079 TCGA-23-2081 TCGA-23-2645 TCGA-24-0968 
        0.53       115.89        91.66        77.00         4.50        19.63 
TCGA-24-0975 TCGA-24-0979 TCGA-24-1103 TCGA-24-1104 TCGA-24-1413 TCGA-24-1418 
       21.80        41.56        54.08        63.55         6.31         7.99 
TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 TCGA-24-1430 
        7.86         0.76         6.25         6.02         5.95        28.34 
TCGA-24-1431 TCGA-24-1436 TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 TCGA-24-1469 
       19.17         8.55        72.92        12.46        45.14         9.11 
TCGA-24-1470 TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1548 TCGA-24-1549 
        3.42        22.19        26.96        57.37        16.21        56.58 
TCGA-24-1550 TCGA-24-1551 TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 
       41.06        51.91        88.50        70.62        39.88        19.53 
TCGA-24-1563 TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 
       47.70        10.26        17.23        90.15        88.34        48.33 
TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 TCGA-24-1846 TCGA-24-1847 TCGA-24-1850 
       38.24         8.32         3.48         4.37        11.28         5.49 
TCGA-24-1920 TCGA-24-1924 TCGA-24-1928 TCGA-24-1930 TCGA-24-2023 TCGA-24-2024 
        9.80        30.21        11.05        81.11        44.84        58.16 
TCGA-24-2026 TCGA-24-2027 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 
       34.82       109.68        53.95        18.48        28.18        64.01 
TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 TCGA-24-2267 TCGA-24-2281 TCGA-24-2288 
       44.48        57.07        36.16        47.54        44.58         0.82 
TCGA-24-2289 TCGA-25-1312 TCGA-25-1314 TCGA-25-1319 TCGA-25-1623 TCGA-25-1625 
       67.36         1.02        31.99        65.00        18.58        18.02 
TCGA-25-1626 TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1635 
       15.78         7.86         0.30        56.94        60.59        51.22 
TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 
       14.93        24.99        18.05        49.05         1.02        38.04 
TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-29-1690 TCGA-29-1691 
       42.02         2.96        29.00        30.97        44.71        47.18 
TCGA-29-1695 TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 
        0.79        68.28         0.53        16.90        18.64        59.67 
TCGA-29-1705 TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 TCGA-29-1764 TCGA-29-1766 
       18.25        29.23        34.62        17.00        62.93        39.09 
TCGA-29-1770 TCGA-29-1774 TCGA-29-1776 TCGA-29-1777 TCGA-29-1778 TCGA-29-1783 
       24.36        17.29        11.84        12.30        14.93         7.20 
TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2429 TCGA-29-2431 
       34.62        86.17        65.00        62.47         4.87        42.25 
TCGA-29-2434 TCGA-29-2436 TCGA-30-1856 TCGA-30-1860 TCGA-30-1861 TCGA-30-1862 
       11.47         9.76        15.68        44.91        34.78         6.08 
TCGA-30-1867 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 
        1.18        24.26        30.05        48.79        45.57        30.18 
TCGA-31-1950 TCGA-31-1955 TCGA-36-1568 TCGA-36-1570 TCGA-36-1575 TCGA-36-1576 
       18.77        42.51        28.73        21.53         8.55        30.05 
TCGA-36-1577 TCGA-36-1578 TCGA-36-1581 TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 
       25.74        27.85        24.69        35.05        33.01        29.49 
TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2544 TCGA-36-2549 
       29.79        25.91        25.08        23.80        20.98         6.05 
TCGA-36-2551 TCGA-36-2552 TCGA-42-2582 TCGA-42-2587 TCGA-42-2590 TCGA-42-2593 
       16.14        11.47        26.04        23.74         7.46         1.48 
TCGA-57-1582 TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 
       24.03         1.74        22.32        28.96        25.05        25.02 
TCGA-59-2348 TCGA-59-2349 TCGA-59-2352 TCGA-59-2354 TCGA-59-2363 TCGA-61-1721 
      180.16        80.12         9.40        34.39         5.39        11.11 
TCGA-61-1722 TCGA-61-1725 TCGA-61-1741 TCGA-61-1743 TCGA-61-1900 TCGA-61-1901 
        8.05        31.40        33.67        43.69         5.79        11.41 
TCGA-61-1907 TCGA-61-1911 TCGA-61-1915 TCGA-61-1917 TCGA-61-1919 TCGA-61-2000 
       31.30        42.48        67.73        43.43        38.17        14.50 
TCGA-61-2003 TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 
        3.98        39.85        30.64         1.18        45.96        45.40 
TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2098 
        4.80         4.77        51.72        71.74        61.64        65.49 
TCGA-61-2102 TCGA-61-2109 TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 
        6.48        20.68       125.72        22.22         6.35 

  6Q LOSS MUTATED 6Q LOSS WILD-TYPE 
             0.26              0.30 
  6Q LOSS MUTATED 6Q LOSS WILD-TYPE 
           151.99            180.16 
  6Q LOSS MUTATED 6Q LOSS WILD-TYPE 
            27.78             28.64 
[1] "0.3 - 152.0 (27.8)" "0.3 - 180.2 (28.6)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
  "6Q LOSS MUTATED"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED" "6Q LOSS WILD-TYPE" "6Q LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"6Q LOSS WILD-TYPE"   "6Q LOSS MUTATED"   "6Q LOSS MUTATED" 
[1] "hr=" "1.1"
D52V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  6Q LOSS MUTATED         2   230                0
  6Q LOSS WILD-TYPE       0   318                2
D52V3, multiclass
                  clus
vv                 6Q LOSS MUTATED 6Q LOSS WILD-TYPE
  OMENTUM                        2                 0
  OVARY                        230               318
  PERITONEUM OVARY               0                 2
D52V4, continuous
D52V5, binary
                   cls
clus                  0   1
  6Q LOSS MUTATED     1 235
  6Q LOSS WILD-TYPE   2 324
[1] "tbl2"
                   cls
clus                [,1] [,2]
  6Q LOSS MUTATED      1  235
  6Q LOSS WILD-TYPE    2  324
     clus
vv    6Q LOSS MUTATED 6Q LOSS WILD-TYPE
  NO                1                 2
  YES             235               324
                   vv
clus                R0 R1 R2
  6Q LOSS MUTATED    4  8  1
  6Q LOSS WILD-TYPE 10 18  1
D52V6, multiclass
    clus
vv   6Q LOSS MUTATED 6Q LOSS WILD-TYPE
  R0               4                10
  R1               8                18
  R2               1                 1

Clustering(53) Variable = 7P LOSS MUTATION ANALYSIS
D53V1, survival
                   sevent
clus2                 0   1
  7P LOSS MUTATED    50  60
  7P LOSS WILD-TYPE 211 226
  7P LOSS MUTATED 7P LOSS WILD-TYPE 
              110               437 
  7P LOSS MUTATED 7P LOSS WILD-TYPE 
               60               226 
$`7P LOSS MUTATED`
TCGA-04-1338 TCGA-04-1347 TCGA-04-1349 TCGA-04-1362 TCGA-04-1638 TCGA-09-0369 
       46.62        63.06        21.57        44.32        55.40        35.54 
TCGA-09-1659 TCGA-09-1666 TCGA-09-1668 TCGA-09-1669 TCGA-10-0928 TCGA-10-0930 
        9.96        57.57        55.36        30.48        18.48        33.24 
TCGA-10-0931 TCGA-10-0935 TCGA-10-0938 TCGA-13-0751 TCGA-13-0792 TCGA-13-0885 
       32.28        35.41        19.86        55.17        36.72        91.40 
TCGA-13-0887 TCGA-13-0890 TCGA-13-0897 TCGA-13-0919 TCGA-13-1409 TCGA-13-1487 
       66.64        67.99        57.47        14.89         6.84        22.39 
TCGA-13-1497 TCGA-13-1499 TCGA-13-1505 TCGA-13-1510 TCGA-13-2061 TCGA-20-1685 
       54.31        38.37         4.21         2.56        10.78        16.67 
TCGA-23-1029 TCGA-23-1109 TCGA-23-1114 TCGA-23-1118 TCGA-23-1119 TCGA-23-1122 
        8.81        51.35        68.68        86.01       129.96        39.09 
TCGA-23-2078 TCGA-23-2084 TCGA-23-2641 TCGA-24-0982 TCGA-24-1104 TCGA-24-1105 
       87.48        49.84         2.76        22.32        63.55        47.41 
TCGA-24-1417 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1434 TCGA-24-1435 
        7.82         5.95         5.36         4.80        18.67        43.53 
TCGA-24-1436 TCGA-24-1463 TCGA-24-1464 TCGA-24-1469 TCGA-24-1546 TCGA-24-1548 
        8.55        72.92        12.46         9.11        64.27        16.21 
TCGA-24-1562 TCGA-24-1567 TCGA-24-1842 TCGA-24-1843 TCGA-24-1846 TCGA-24-1847 
       45.50        17.23         8.32         3.48         4.37        11.28 
TCGA-24-1850 TCGA-24-1930 TCGA-24-2254 TCGA-24-2260 TCGA-24-2262 TCGA-24-2298 
        5.49        81.11        57.07        36.16         0.36        53.26 
TCGA-25-1317 TCGA-25-1321 TCGA-25-1630 TCGA-25-1632 TCGA-25-1633 TCGA-25-1635 
        1.02        33.96         7.86        56.94        60.59        51.22 
TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 TCGA-25-2396 TCGA-25-2399 TCGA-29-1691 
       13.02        49.05         1.02         3.02        19.99        47.18 
TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1711 TCGA-29-1761 TCGA-29-1766 
       16.90        18.64        59.67        34.62        17.00        39.09 
TCGA-29-1776 TCGA-29-1781 TCGA-29-2414 TCGA-29-2431 TCGA-30-1718 TCGA-30-1855 
       11.84         8.35        86.17        42.25        51.91         2.47 
TCGA-30-1887 TCGA-36-1569 TCGA-36-1570 TCGA-36-1574 TCGA-36-1578 TCGA-36-2552 
       24.26        29.06        21.53        22.55        27.85        11.47 
TCGA-42-2589 TCGA-57-1992 TCGA-59-2352 TCGA-59-2354 TCGA-59-2363 TCGA-61-1722 
        7.56        28.96         9.40        34.39         5.39         8.05 
TCGA-61-1724 TCGA-61-1740 TCGA-61-1906 TCGA-61-1913 TCGA-61-1995 TCGA-61-2008 
       20.94         2.43        34.13        48.92         1.97        30.61 
TCGA-61-2009 TCGA-61-2096 
       39.85        58.39 

$`7P LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1342 
       40.24        41.00         1.81        49.15         2.01        18.51 
TCGA-04-1343 TCGA-04-1346 TCGA-04-1348 TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 
       11.87        65.49        48.76        63.98        65.46        49.28 
TCGA-04-1361 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 
       32.52        33.67        76.54        71.47        82.36        56.55 
TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 TCGA-04-1530 TCGA-04-1536 TCGA-04-1542 
       41.59        19.99        38.37       119.08        29.06        84.20 
TCGA-04-1644 TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 
       48.89        27.88        28.64        64.64        36.23        31.86 
TCGA-04-1654 TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 
       47.70        45.34        29.16         9.47        57.73        17.95 
TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1667 TCGA-09-1670 
       38.43        89.33        74.89        41.59        61.87        17.98 
TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 
        5.85         3.02         8.55        97.55         6.15         6.12 
TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 
       35.15         4.50       112.37        71.11        63.09        39.75 
TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 
       20.91        26.93        12.46        54.31        25.91        81.47 
TCGA-10-0933 TCGA-10-0934 TCGA-10-0936 TCGA-10-0937 TCGA-13-0714 TCGA-13-0717 
       11.70         3.88        35.80        15.12         6.21        24.59 
TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 
       44.55        39.58         2.73        12.39        31.07        15.19 
TCGA-13-0730 TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 
       17.79         2.47        11.18        11.38        11.54        34.06 
TCGA-13-0762 TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 TCGA-13-0793 
       32.25        31.04        21.40         8.42        38.93        28.70 
TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 
       30.35        19.56         8.71         7.79         8.12         8.28 
TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 
        8.19        43.82        35.28        35.28        13.61        68.91 
TCGA-13-0884 TCGA-13-0886 TCGA-13-0888 TCGA-13-0889 TCGA-13-0891 TCGA-13-0893 
      107.18        74.27        70.39        61.81        69.01        43.36 
TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 
       56.15        57.07        19.36        47.38        48.33        47.84 
TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 
       44.94        44.84        37.08        27.68        34.06        29.98 
TCGA-13-0916 TCGA-13-0920 TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 
       21.14        13.81         4.64         6.41         6.08        10.88 
TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 TCGA-13-1410 TCGA-13-1411 
        6.61         7.36         6.05         5.92         4.70         4.21 
TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 
        5.33        54.61        87.06        61.71        29.39        98.04 
TCGA-13-1485 TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 
       20.68        70.82        82.88        52.44        73.55        38.17 
TCGA-13-1495 TCGA-13-1496 TCGA-13-1498 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 
       49.22         4.24        37.61        13.97        32.84        16.57 
TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 
        4.41         4.77         4.14         3.88         3.09        14.24 
TCGA-13-2059 TCGA-13-2060 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 
       12.23         8.58         8.75         6.28        23.05        25.94 
TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 TCGA-20-1686 
       26.20        72.20        27.48        25.38        19.07         2.93 
TCGA-20-1687 TCGA-23-1021 TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 
        2.66        47.54        42.51        40.54        15.39        26.83 
TCGA-23-1027 TCGA-23-1028 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1110 
       31.73        49.41        29.10        18.87         2.24        54.51 
TCGA-23-1111 TCGA-23-1113 TCGA-23-1116 TCGA-23-1117 TCGA-23-1120 TCGA-23-1121 
        3.22        31.20         4.57        33.30         4.27         6.38 
TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 TCGA-23-2072 TCGA-23-2077 TCGA-23-2079 
       33.47        58.13         0.53        24.95       115.89        91.66 
TCGA-23-2081 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 
       77.00         4.70         4.50         7.63        19.63        11.64 
TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 TCGA-24-1103 TCGA-24-1413 TCGA-24-1416 
       21.80        41.56         7.66        54.08         6.31         6.38 
TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 TCGA-24-1428 
        7.99         7.86         0.76         6.25         6.02        17.36 
TCGA-24-1430 TCGA-24-1431 TCGA-24-1466 TCGA-24-1467 TCGA-24-1470 TCGA-24-1471 
       28.34        19.17        45.14       105.99         3.42         1.18 
TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 
       22.19        26.96        57.37        56.58        41.06        51.91 
TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 
       41.39        58.09        88.50        70.62        39.88        19.53 
TCGA-24-1560 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1603 TCGA-24-1604 
       44.09        47.70        25.87        10.26        90.15        88.34 
TCGA-24-1614 TCGA-24-1616 TCGA-24-1844 TCGA-24-1845 TCGA-24-1849 TCGA-24-1920 
       48.33        38.24         3.72         3.81         5.75         9.80 
TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 TCGA-24-2019 TCGA-24-2020 
       22.65        30.21        16.41        11.05         4.87       151.99 
TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 
       44.84        58.16        34.82       109.68        14.43        53.95 
TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2261 TCGA-24-2267 
       18.48        28.18        64.01        44.48         0.79        47.54 
TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 
       31.63        70.45        44.58         0.82        67.36        36.23 
TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 
       16.64        33.11        55.86         1.02        26.93        31.99 
TCGA-25-1315 TCGA-25-1316 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1322 
       51.06        37.02        34.98        65.00        36.95         2.99 
TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 
       12.00         2.96        18.58        18.02        15.78         0.36 
TCGA-25-1628 TCGA-25-1631 TCGA-25-1634 TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 
       20.58         0.30        35.54        14.93        24.99        18.05 
TCGA-25-1878 TCGA-25-2393 TCGA-25-2397 TCGA-25-2398 TCGA-25-2400 TCGA-25-2401 
       85.05        38.04        12.00        45.01        42.02         2.96 
TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1693 
       29.00        30.97        26.96        78.87        44.71       101.75 
TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 
       38.53         0.79        33.70        31.17        68.28         0.53 
TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 
       18.25        41.95        29.23        85.68        66.77        62.93 
TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 
       31.23        22.98        24.36        22.52        17.29        12.36 
TCGA-29-1777 TCGA-29-1778 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 TCGA-29-2425 
       12.30        14.93         7.20         5.36        34.62        65.00 
TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 
       62.47        45.11         4.87        11.84        11.47         9.76 
TCGA-30-1714 TCGA-30-1853 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 
       38.07        36.26        15.68         0.26        48.07        44.91 
TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1891 
       34.78         6.08        36.62         1.18        57.57        30.05 
TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 
       48.79        45.57        30.18        18.77        22.45         6.71 
TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1571 TCGA-36-1575 
       42.51        44.09         2.17        28.73        22.85         8.55 
TCGA-36-1576 TCGA-36-1577 TCGA-36-1580 TCGA-36-1581 TCGA-36-2529 TCGA-36-2530 
       30.05        25.74        24.23        24.69        35.05        33.01 
TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 
       29.49        29.79        25.91        25.08        23.80        21.60 
TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 
        2.24        20.98        18.31        20.52        14.17         6.05 
TCGA-36-2551 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 TCGA-42-2590 TCGA-42-2591 
       16.14        26.04        23.74         9.44         7.46        22.39 
TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 
        1.48        24.03        11.38        21.14         1.74        22.32 
TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 
       25.05        25.02       180.16        80.12        22.32       116.12 
TCGA-59-2355 TCGA-59-2372 TCGA-61-1721 TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 
        2.14        44.78        11.11        31.40        18.54        27.88 
TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 
        4.34        31.76        28.47        48.79        44.84        35.80 
TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 
       33.67        43.69         1.41         8.42         5.79        11.41 
TCGA-61-1903 TCGA-61-1904 TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1914 
       13.02         9.07        31.30        37.02        42.48        56.58 
TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 TCGA-61-1998 TCGA-61-2000 
       67.73        43.43        15.75        38.17         5.52        14.50 
TCGA-61-2002 TCGA-61-2003 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 
       17.98         3.98        30.64         1.18        45.96        45.40 
TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2097 
        4.80         4.77        51.72        71.74        61.64        60.62 
TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 
       65.49        55.50         6.48        76.83        20.68        44.52 
TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
      125.72        22.22         6.35        31.07         8.58 

  7P LOSS MUTATED 7P LOSS WILD-TYPE 
             0.36              0.26 
  7P LOSS MUTATED 7P LOSS WILD-TYPE 
           129.96            180.16 
  7P LOSS MUTATED 7P LOSS WILD-TYPE 
            29.01             27.88 
[1] "0.4 - 130.0 (29.0)" "0.3 - 180.2 (27.9)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "7P LOSS MUTATED"   "7P LOSS MUTATED"   "7P LOSS MUTATED"   "7P LOSS MUTATED" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
  "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
  "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
  "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "7P LOSS MUTATED"   "7P LOSS MUTATED"   "7P LOSS MUTATED"   "7P LOSS MUTATED" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
  "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
  "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
  "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "7P LOSS MUTATED"   "7P LOSS MUTATED"   "7P LOSS MUTATED"   "7P LOSS MUTATED" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
  "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
  "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED"   "7P LOSS MUTATED" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
  "7P LOSS MUTATED"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "7P LOSS MUTATED" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE"   "7P LOSS MUTATED" "7P LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" "7P LOSS WILD-TYPE" 
[1] "hr=" "1"  
D53V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  7P LOSS MUTATED         0   110                1
  7P LOSS WILD-TYPE       2   438                1
D53V3, multiclass
                  clus
vv                 7P LOSS MUTATED 7P LOSS WILD-TYPE
  OMENTUM                        0                 2
  OVARY                        110               438
  PERITONEUM OVARY               1                 1
D53V4, continuous
D53V5, binary
                   cls
clus                  0   1
  7P LOSS MUTATED     0 113
  7P LOSS WILD-TYPE   3 446
[1] "tbl2"
                   cls
clus                [,1] [,2]
  7P LOSS MUTATED      0  113
  7P LOSS WILD-TYPE    3  446
     clus
vv    7P LOSS MUTATED 7P LOSS WILD-TYPE
  NO                0                 3
  YES             113               446
                   vv
clus                R0 R1 R2
  7P LOSS MUTATED    4  1  0
  7P LOSS WILD-TYPE 10 25  2
D53V6, multiclass
    clus
vv   7P LOSS MUTATED 7P LOSS WILD-TYPE
  R0               4                10
  R1               1                25
  R2               0                 2

Clustering(54) Variable = 7Q LOSS MUTATION ANALYSIS
D54V1, survival
                   sevent
clus2                 0   1
  7Q LOSS MUTATED    35  42
  7Q LOSS WILD-TYPE 226 244
  7Q LOSS MUTATED 7Q LOSS WILD-TYPE 
               77               470 
  7Q LOSS MUTATED 7Q LOSS WILD-TYPE 
               42               244 
$`7Q LOSS MUTATED`
TCGA-04-1349 TCGA-04-1362 TCGA-04-1638 TCGA-09-0369 TCGA-09-1659 TCGA-09-1668 
       21.57        44.32        55.40        35.54         9.96        55.36 
TCGA-10-0930 TCGA-10-0931 TCGA-13-0751 TCGA-13-0792 TCGA-13-0887 TCGA-13-0890 
       33.24        32.28        55.17        36.72        66.64        67.99 
TCGA-13-0897 TCGA-13-0919 TCGA-13-1487 TCGA-13-1499 TCGA-13-1505 TCGA-13-1510 
       57.47        14.89        22.39        38.37         4.21         2.56 
TCGA-13-2061 TCGA-20-1683 TCGA-20-1685 TCGA-23-1029 TCGA-23-1114 TCGA-23-2078 
       10.78        25.38        16.67         8.81        68.68        87.48 
TCGA-23-2084 TCGA-24-0982 TCGA-24-1417 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 
       49.84        22.32         7.82         5.95         5.36         4.80 
TCGA-24-1435 TCGA-24-1463 TCGA-24-1469 TCGA-24-1564 TCGA-24-1567 TCGA-24-1842 
       43.53        72.92         9.11        25.87        17.23         8.32 
TCGA-24-1846 TCGA-24-1847 TCGA-24-1930 TCGA-24-2260 TCGA-24-2298 TCGA-25-1317 
        4.37        11.28        81.11        36.16        53.26         1.02 
TCGA-25-1321 TCGA-25-1630 TCGA-25-1632 TCGA-25-1633 TCGA-25-1877 TCGA-25-2042 
       33.96         7.86        56.94        60.59        18.05        13.02 
TCGA-25-2391 TCGA-25-2392 TCGA-25-2396 TCGA-29-1691 TCGA-29-1701 TCGA-29-1702 
       49.05         1.02         3.02        47.18        16.90        18.64 
TCGA-29-1703 TCGA-29-1761 TCGA-29-1763 TCGA-29-1766 TCGA-29-1776 TCGA-29-1781 
       59.67        17.00        66.77        39.09        11.84         8.35 
TCGA-29-2431 TCGA-30-1718 TCGA-30-1855 TCGA-30-1887 TCGA-31-1959 TCGA-36-1569 
       42.25        51.91         2.47        24.26         2.17        29.06 
TCGA-36-1577 TCGA-36-1578 TCGA-36-1581 TCGA-36-2552 TCGA-59-2352 TCGA-59-2354 
       25.74        27.85        24.69        11.47         9.40        34.39 
TCGA-59-2363 TCGA-61-1724 TCGA-61-1995 TCGA-61-2008 TCGA-61-2096 
        5.39        20.94         1.97        30.61        58.39 

$`7Q LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1350 
       18.51        11.87        65.49        63.06        48.76        63.98 
TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 
       65.46        49.28        32.52        33.67        76.54        71.47 
TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 TCGA-04-1530 
       82.36        56.55        41.59        19.99        38.37       119.08 
TCGA-04-1536 TCGA-04-1542 TCGA-04-1644 TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 
       29.06        84.20        48.89        27.88        28.64        64.64 
TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 
       36.23        31.86        47.70        45.34        29.16         9.47 
TCGA-09-0366 TCGA-09-0367 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 
       57.73        17.95        38.43        89.33        74.89        41.59 
TCGA-09-1666 TCGA-09-1667 TCGA-09-1669 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 
       57.57        61.87        30.48        17.98         5.85         3.02 
TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 
        8.55        97.55         6.15         6.12        35.15         4.50 
TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 
      112.37        71.11        63.09        39.75        20.91        26.93 
TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0933 
       12.46        54.31        25.91        81.47        18.48        11.70 
TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 
        3.88        35.41        35.80        15.12        19.86         6.21 
TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 
       24.59        44.55        39.58         2.73        12.39        31.07 
TCGA-13-0727 TCGA-13-0730 TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 
       15.19        17.79         2.47        11.18        11.38        11.54 
TCGA-13-0761 TCGA-13-0762 TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 
       34.06        32.25        31.04        21.40         8.42        38.93 
TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 
       28.70        30.35        19.56         8.71         7.79         8.12 
TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 
        8.28         8.19        43.82        35.28        35.28        13.61 
TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 TCGA-13-0888 TCGA-13-0889 
       68.91       107.18        91.40        74.27        70.39        61.81 
TCGA-13-0891 TCGA-13-0893 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 
       69.01        43.36        56.15        57.07        19.36        47.38 
TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 
       48.33        47.84        44.94        44.84        37.08        27.68 
TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0920 TCGA-13-0921 TCGA-13-0923 
       34.06        29.98        21.14        13.81         4.64         6.41 
TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 
        6.08        10.88         6.61         7.36         6.05         5.92 
TCGA-13-1409 TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 
        6.84         4.70         4.21         5.33        54.61        87.06 
TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 TCGA-13-1488 TCGA-13-1489 
       61.71        29.39        98.04        20.68        70.82        82.88 
TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 TCGA-13-1497 
       52.44        73.55        38.17        49.22         4.24        54.31 
TCGA-13-1498 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 TCGA-13-1506 TCGA-13-1507 
       37.61        13.97        32.84        16.57         4.41         4.77 
TCGA-13-1509 TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 TCGA-13-2059 TCGA-13-2060 
        4.14         3.88         3.09        14.24        12.23         8.58 
TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 
        8.75         6.28        23.05        25.94        26.20        72.20 
TCGA-20-1682 TCGA-20-1684 TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 TCGA-23-1022 
       27.48        19.07         2.93         2.66        47.54        42.51 
TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1030 
       40.54        15.39        26.83        31.73        49.41        29.10 
TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 
       18.87         2.24        51.35        54.51         3.22        31.20 
TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 
        4.57        33.30        86.01       129.96         4.27         6.38 
TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 TCGA-23-2072 TCGA-23-2077 
       39.09        33.47        58.13         0.53        24.95       115.89 
TCGA-23-2079 TCGA-23-2081 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 
       91.66        77.00         2.76         4.70         4.50         7.63 
TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 TCGA-24-1103 
       19.63        11.64        21.80        41.56         7.66        54.08 
TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1418 TCGA-24-1419 
       63.55        47.41         6.31         6.38         7.99         7.86 
TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 
        0.76         6.25         6.02        17.36        28.34        19.17 
TCGA-24-1434 TCGA-24-1436 TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 TCGA-24-1470 
       18.67         8.55        12.46        45.14       105.99         3.42 
TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 
        1.18        22.19        26.96        57.37        64.27        16.21 
TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 
       56.58        41.06        51.91        41.39        58.09        88.50 
TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 
       70.62        39.88        19.53        44.09        45.50        47.70 
TCGA-24-1565 TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 TCGA-24-1843 
       10.26        90.15        88.34        48.33        38.24         3.48 
TCGA-24-1844 TCGA-24-1845 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 
        3.72         3.81         5.75         5.49         9.80        22.65 
TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 
       30.21        16.41        11.05         4.87       151.99        44.84 
TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 
       58.16        34.82       109.68        14.43        53.95        18.48 
TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2261 TCGA-24-2262 
       28.18        64.01        44.48        57.07         0.79         0.36 
TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 
       47.54        31.63        70.45        44.58         0.82        67.36 
TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 TCGA-25-1312 TCGA-25-1313 
       36.23        16.64        33.11        55.86         1.02        26.93 
TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 
       31.99        51.06        37.02        34.98        65.00        36.95 
TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 
        2.99        12.00         2.96        18.58        18.02        15.78 
TCGA-25-1627 TCGA-25-1628 TCGA-25-1631 TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 
        0.36        20.58         0.30        35.54        51.22        14.93 
TCGA-25-1871 TCGA-25-1878 TCGA-25-2393 TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 
       24.99        85.05        38.04        12.00        45.01        19.99 
TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 
       42.02         2.96        29.00        30.97        26.96        78.87 
TCGA-29-1690 TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 
       44.71       101.75        38.53         0.79        33.70        31.17 
TCGA-29-1698 TCGA-29-1699 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 
       68.28         0.53        18.25        41.95        29.23        34.62 
TCGA-29-1762 TCGA-29-1764 TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 
       85.68        62.93        31.23        22.98        24.36        22.52 
TCGA-29-1774 TCGA-29-1775 TCGA-29-1777 TCGA-29-1778 TCGA-29-1783 TCGA-29-1784 
       17.29        12.36        12.30        14.93         7.20         5.36 
TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 
       34.62        86.17        65.00        62.47        45.11         4.87 
TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1853 TCGA-30-1856 
       11.84        11.47         9.76        38.07        36.26        15.68 
TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 
        0.26        48.07        44.91        34.78         6.08        36.62 
TCGA-30-1867 TCGA-30-1880 TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 
        1.18        57.57        30.05        48.79        45.57        30.18 
TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-36-1568 
       18.77        22.45         6.71        42.51        44.09        28.73 
TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 TCGA-36-1580 
       21.53        22.85        22.55         8.55        30.05        24.23 
TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 
       35.05        33.01        29.49        29.79        25.91        25.08 
TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 
       23.80        21.60         2.24        20.98        18.31        20.52 
TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 
       14.17         6.05        16.14        26.04        23.74         9.44 
TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 
        7.56         7.46        22.39         1.48        24.03        11.38 
TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 
       21.14         1.74        22.32        28.96        25.05        25.02 
TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2355 TCGA-59-2372 
      180.16        80.12        22.32       116.12         2.14        44.78 
TCGA-61-1721 TCGA-61-1722 TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 TCGA-61-1730 
       11.11         8.05        31.40        18.54        27.88         4.34 
TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 
       31.76        28.47        48.79        44.84        35.80         2.43 
TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 
       33.67        43.69         1.41         8.42         5.79        11.41 
TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 
       13.02         9.07        34.13        31.30        37.02        42.48 
TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 
       48.92        56.58        67.73        43.43        15.75        38.17 
TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 TCGA-61-2009 TCGA-61-2012 
        5.52        14.50        17.98         3.98        39.85        30.64 
TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 
        1.18        45.96        45.40         4.80         4.77        51.72 
TCGA-61-2094 TCGA-61-2095 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 
       71.74        61.64        60.62        65.49        55.50         6.48 
TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 
       76.83        20.68        44.52       125.72        22.22         6.35 
TCGA-61-2613 TCGA-61-2614 
       31.07         8.58 

  7Q LOSS MUTATED 7Q LOSS WILD-TYPE 
             1.02              0.26 
  7Q LOSS MUTATED 7Q LOSS WILD-TYPE 
            87.48            180.16 
  7Q LOSS MUTATED 7Q LOSS WILD-TYPE 
           24.690            28.715 
[1] "1.0 - 87.5 (24.7)"  "0.3 - 180.2 (28.7)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED"   "7Q LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED"   "7Q LOSS MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
  "7Q LOSS MUTATED"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED"   "7Q LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED"   "7Q LOSS MUTATED" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED"   "7Q LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED"   "7Q LOSS MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
  "7Q LOSS MUTATED"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED"   "7Q LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED"   "7Q LOSS MUTATED" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED"   "7Q LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED"   "7Q LOSS MUTATED" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
  "7Q LOSS MUTATED"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED"   "7Q LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED"   "7Q LOSS MUTATED" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE"   "7Q LOSS MUTATED" "7Q LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" "7Q LOSS WILD-TYPE" 
[1] "hr=" "1.2"
D54V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  7Q LOSS MUTATED         0    76                1
  7Q LOSS WILD-TYPE       2   472                1
D54V3, multiclass
                  clus
vv                 7Q LOSS MUTATED 7Q LOSS WILD-TYPE
  OMENTUM                        0                 2
  OVARY                         76               472
  PERITONEUM OVARY               1                 1
D54V4, continuous
D54V5, binary
                   cls
clus                  0   1
  7Q LOSS MUTATED     1  76
  7Q LOSS WILD-TYPE   2 483
[1] "tbl2"
                   cls
clus                [,1] [,2]
  7Q LOSS MUTATED      1   76
  7Q LOSS WILD-TYPE    2  483
     clus
vv    7Q LOSS MUTATED 7Q LOSS WILD-TYPE
  NO                1                 2
  YES              76               483
                   vv
clus                R0 R1 R2
  7Q LOSS MUTATED    3  0  0
  7Q LOSS WILD-TYPE 11 26  2
D54V6, multiclass
    clus
vv   7Q LOSS MUTATED 7Q LOSS WILD-TYPE
  R0               3                11
  R1               0                26
  R2               0                 2

Clustering(55) Variable = 8P LOSS MUTATION ANALYSIS
D55V1, survival
                   sevent
clus2                 0   1
  8P LOSS MUTATED   117 140
  8P LOSS WILD-TYPE 144 146
  8P LOSS MUTATED 8P LOSS WILD-TYPE 
              257               290 
  8P LOSS MUTATED 8P LOSS WILD-TYPE 
              140               146 
$`8P LOSS MUTATED`
TCGA-04-1332 TCGA-04-1338 TCGA-04-1346 TCGA-04-1348 TCGA-04-1349 TCGA-04-1361 
       41.00        46.62        65.49        48.76        21.57        32.52 
TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 TCGA-04-1517 TCGA-04-1530 
       76.54        71.47        82.36        56.55        19.99       119.08 
TCGA-04-1536 TCGA-04-1638 TCGA-04-1646 TCGA-04-1652 TCGA-04-1655 TCGA-09-0366 
       29.06        55.40        27.88        31.86        45.34        57.73 
TCGA-09-0367 TCGA-09-1661 TCGA-09-1664 TCGA-09-1668 TCGA-09-1670 TCGA-09-1674 
       17.95        38.43        74.89        55.36        17.98         8.55 
TCGA-09-2050 TCGA-09-2051 TCGA-09-2054 TCGA-09-2056 TCGA-10-0925 TCGA-10-0927 
       71.11        63.09        20.91        12.46        54.31        81.47 
TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 TCGA-10-0936 TCGA-13-0723 TCGA-13-0725 
       18.48        33.24        32.28        35.80        39.58        12.39 
TCGA-13-0730 TCGA-13-0757 TCGA-13-0761 TCGA-13-0762 TCGA-13-0792 TCGA-13-0793 
       17.79        11.18        34.06        32.25        36.72        28.70 
TCGA-13-0795 TCGA-13-0802 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0885 
       19.56         8.19        35.28        13.61        68.91        91.40 
TCGA-13-0887 TCGA-13-0888 TCGA-13-0890 TCGA-13-0899 TCGA-13-0901 TCGA-13-0912 
       66.64        70.39        67.99        56.15        19.36        34.06 
TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 TCGA-13-0924 TCGA-13-1403 
       29.98        21.14        14.89        13.81         6.08        10.88 
TCGA-13-1407 TCGA-13-1411 TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1487 
        6.05         4.21        87.06        61.71        29.39        22.39 
TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 
       38.17        49.22         4.24        38.37        13.97        32.84 
TCGA-13-1504 TCGA-13-1505 TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-2059 
       16.57         4.21         4.77         4.14         2.56        12.23 
TCGA-13-2061 TCGA-13-2065 TCGA-20-0990 TCGA-20-0991 TCGA-20-1684 TCGA-20-1686 
       10.78         8.75        25.94        26.20        19.07         2.93 
TCGA-23-1021 TCGA-23-1024 TCGA-23-1027 TCGA-23-1031 TCGA-23-1114 TCGA-23-1116 
       47.54        15.39        31.73        18.87        68.68         4.57 
TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 
        4.27         6.38        39.09        33.47        58.13         0.53 
TCGA-23-2072 TCGA-23-2077 TCGA-23-2643 TCGA-23-2645 TCGA-24-0975 TCGA-24-0980 
       24.95       115.89         4.70         4.50        21.80         7.66 
TCGA-24-0982 TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 
       22.32        63.55        47.41         6.31         6.38         7.82 
TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 TCGA-24-1427 TCGA-24-1428 
        7.86         0.76         6.25         6.02         4.80        17.36 
TCGA-24-1431 TCGA-24-1434 TCGA-24-1436 TCGA-24-1464 TCGA-24-1467 TCGA-24-1470 
       19.17        18.67         8.55        12.46       105.99         3.42 
TCGA-24-1544 TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1552 
       26.96        64.27        16.21        56.58        41.06        41.39 
TCGA-24-1558 TCGA-24-1604 TCGA-24-1614 TCGA-24-1842 TCGA-24-1844 TCGA-24-1846 
       19.53        88.34        48.33         8.32         3.72         4.37 
TCGA-24-1850 TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 TCGA-24-1930 TCGA-24-2024 
        5.49        30.21        16.41        11.05        81.11        58.16 
TCGA-24-2027 TCGA-24-2030 TCGA-24-2035 TCGA-24-2254 TCGA-24-2261 TCGA-24-2267 
      109.68        53.95        28.18        57.07         0.79        47.54 
TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 
       70.45        44.58         0.82        36.23        16.64        33.11 
TCGA-25-1313 TCGA-25-1314 TCGA-25-1318 TCGA-25-1319 TCGA-25-1321 TCGA-25-1322 
       26.93        31.99        34.98        65.00        33.96         2.99 
TCGA-25-1323 TCGA-25-1626 TCGA-25-1627 TCGA-25-1630 TCGA-25-1631 TCGA-25-1633 
       12.00        15.78         0.36         7.86         0.30        60.59 
TCGA-25-1635 TCGA-25-1871 TCGA-25-1878 TCGA-25-2393 TCGA-25-2396 TCGA-25-2399 
       51.22        24.99        85.05        38.04         3.02        19.99 
TCGA-25-2400 TCGA-25-2404 TCGA-25-2409 TCGA-29-1694 TCGA-29-1695 TCGA-29-1697 
       42.02        29.00        26.96        38.53         0.79        31.17 
TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 TCGA-29-1703 TCGA-29-1705 TCGA-29-1710 
       68.28         0.53        16.90        59.67        18.25        29.23 
TCGA-29-1761 TCGA-29-1762 TCGA-29-1768 TCGA-29-1770 TCGA-29-1774 TCGA-29-1775 
       17.00        85.68        31.23        24.36        17.29        12.36 
TCGA-29-1783 TCGA-29-1784 TCGA-29-2428 TCGA-29-2429 TCGA-29-2432 TCGA-29-2434 
        7.20         5.36        45.11         4.87        11.84        11.47 
TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1862 TCGA-30-1866 TCGA-30-1887 
        2.47        15.68         0.26         6.08        36.62        24.26 
TCGA-31-1944 TCGA-31-1950 TCGA-31-1951 TCGA-31-1955 TCGA-36-1569 TCGA-36-1570 
       45.57        18.77        22.45        42.51        29.06        21.53 
TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1577 TCGA-36-1580 TCGA-36-2534 
       22.85        22.55         8.55        25.74        24.23        29.79 
TCGA-36-2537 TCGA-36-2538 TCGA-36-2542 TCGA-36-2543 TCGA-36-2547 TCGA-36-2552 
       25.91        25.08        21.60         2.24        20.52        11.47 
TCGA-42-2587 TCGA-42-2588 TCGA-42-2589 TCGA-42-2590 TCGA-42-2593 TCGA-57-1583 
       23.74         9.44         7.56         7.46         1.48        11.38 
TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 
        1.74        22.32        28.96        25.05        25.02       180.16 
TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 TCGA-61-1727 TCGA-61-1728 TCGA-61-1730 
       22.32       116.12         9.40        18.54        27.88         4.34 
TCGA-61-1733 TCGA-61-1737 TCGA-61-1740 TCGA-61-1741 TCGA-61-1895 TCGA-61-1904 
       31.76        44.84         2.43        33.67         1.41         9.07 
TCGA-61-1914 TCGA-61-1915 TCGA-61-1919 TCGA-61-1998 TCGA-61-2000 TCGA-61-2008 
       56.58        67.73        38.17         5.52        14.50        30.61 
TCGA-61-2016 TCGA-61-2018 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 
        1.18        45.40        60.62        65.49        55.50         6.48 
TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 TCGA-61-2113 TCGA-61-2613 
       76.83        20.68        44.52        22.22        31.07 

$`8P LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1342 TCGA-04-1343 
       40.24         1.81        49.15         2.01        18.51        11.87 
TCGA-04-1347 TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1362 TCGA-04-1364 
       63.06        63.98        65.46        49.28        44.32        33.67 
TCGA-04-1516 TCGA-04-1525 TCGA-04-1542 TCGA-04-1644 TCGA-04-1648 TCGA-04-1649 
       41.59        38.37        84.20        48.89        28.64        64.64 
TCGA-04-1651 TCGA-04-1654 TCGA-09-0364 TCGA-09-0365 TCGA-09-0369 TCGA-09-1659 
       36.23        47.70        29.16         9.47        35.54         9.96 
TCGA-09-1662 TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 TCGA-09-1669 TCGA-09-1672 
       89.33        41.59        57.57        61.87        30.48         5.85 
TCGA-09-1673 TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 
        3.02        97.55         6.15         6.12        35.15         4.50 
TCGA-09-2049 TCGA-09-2053 TCGA-09-2055 TCGA-10-0926 TCGA-10-0933 TCGA-10-0934 
      112.37        39.75        26.93        25.91        11.70         3.88 
TCGA-10-0935 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 
       35.41        15.12        19.86         6.21        24.59        44.55 
TCGA-13-0724 TCGA-13-0726 TCGA-13-0727 TCGA-13-0751 TCGA-13-0755 TCGA-13-0758 
        2.73        31.07        15.19        55.17         2.47        11.38 
TCGA-13-0760 TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 TCGA-13-0794 
       11.54        31.04        21.40         8.42        38.93        30.35 
TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 TCGA-13-0803 TCGA-13-0804 
        8.71         7.79         8.12         8.28        43.82        35.28 
TCGA-13-0884 TCGA-13-0886 TCGA-13-0889 TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 
      107.18        74.27        61.81        69.01        43.36        57.47 
TCGA-13-0900 TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 
       57.07        47.38        48.33        47.84        44.94        44.84 
TCGA-13-0910 TCGA-13-0911 TCGA-13-0921 TCGA-13-0923 TCGA-13-1404 TCGA-13-1405 
       37.08        27.68         4.64         6.41         6.61         7.36 
TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 TCGA-13-1412 TCGA-13-1477 TCGA-13-1484 
        5.92         6.84         4.70         5.33        54.61        98.04 
TCGA-13-1485 TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1497 
       20.68        70.82        82.88        52.44        73.55        54.31 
TCGA-13-1498 TCGA-13-1506 TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 TCGA-13-2060 
       37.61         4.41         3.88         3.09        14.24         8.58 
TCGA-13-2071 TCGA-20-0987 TCGA-20-0996 TCGA-20-1682 TCGA-20-1683 TCGA-20-1685 
        6.28        23.05        72.20        27.48        25.38        16.67 
TCGA-20-1687 TCGA-23-1022 TCGA-23-1023 TCGA-23-1026 TCGA-23-1028 TCGA-23-1029 
        2.66        42.51        40.54        26.83        49.41         8.81 
TCGA-23-1030 TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 
       29.10         2.24        51.35        54.51         3.22        31.20 
TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 
       33.30        86.01       129.96        87.48        91.66        77.00 
TCGA-23-2084 TCGA-23-2641 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0979 
       49.84         2.76         7.63        19.63        11.64        41.56 
TCGA-24-1103 TCGA-24-1418 TCGA-24-1425 TCGA-24-1426 TCGA-24-1430 TCGA-24-1435 
       54.08         7.99         5.95         5.36        28.34        43.53 
TCGA-24-1463 TCGA-24-1466 TCGA-24-1469 TCGA-24-1471 TCGA-24-1474 TCGA-24-1545 
       72.92        45.14         9.11         1.18        22.19        57.37 
TCGA-24-1551 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1560 
       51.91        58.09        88.50        70.62        39.88        44.09 
TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 
       45.50        47.70        25.87        10.26        17.23        90.15 
TCGA-24-1616 TCGA-24-1843 TCGA-24-1845 TCGA-24-1847 TCGA-24-1849 TCGA-24-1920 
       38.24         3.48         3.81        11.28         5.75         9.80 
TCGA-24-1923 TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 TCGA-24-2026 TCGA-24-2029 
       22.65         4.87       151.99        44.84        34.82        14.43 
TCGA-24-2033 TCGA-24-2036 TCGA-24-2038 TCGA-24-2260 TCGA-24-2262 TCGA-24-2271 
       18.48        64.01        44.48        36.16         0.36        31.63 
TCGA-24-2289 TCGA-24-2297 TCGA-24-2298 TCGA-25-1312 TCGA-25-1315 TCGA-25-1316 
       67.36        55.86        53.26         1.02        51.06        37.02 
TCGA-25-1317 TCGA-25-1320 TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 TCGA-25-1628 
        1.02        36.95         2.96        18.58        18.02        20.58 
TCGA-25-1632 TCGA-25-1634 TCGA-25-1870 TCGA-25-1877 TCGA-25-2042 TCGA-25-2391 
       56.94        35.54        14.93        18.05        13.02        49.05 
TCGA-25-2392 TCGA-25-2397 TCGA-25-2398 TCGA-25-2401 TCGA-25-2408 TCGA-29-1688 
        1.02        12.00        45.01         2.96        30.97        78.87 
TCGA-29-1690 TCGA-29-1691 TCGA-29-1693 TCGA-29-1696 TCGA-29-1702 TCGA-29-1707 
       44.71        47.18       101.75        33.70        18.64        41.95 
TCGA-29-1711 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1769 TCGA-29-1771 
       34.62        66.77        62.93        39.09        22.98        22.52 
TCGA-29-1776 TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 TCGA-29-1785 TCGA-29-2414 
       11.84        12.30        14.93         8.35        34.62        86.17 
TCGA-29-2425 TCGA-29-2427 TCGA-29-2431 TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 
       65.00        62.47        42.25         9.76        38.07        51.91 
TCGA-30-1853 TCGA-30-1859 TCGA-30-1860 TCGA-30-1861 TCGA-30-1867 TCGA-30-1880 
       36.26        48.07        44.91        34.78         1.18        57.57 
TCGA-30-1891 TCGA-30-1892 TCGA-31-1946 TCGA-31-1953 TCGA-31-1956 TCGA-31-1959 
       30.05        48.79        30.18         6.71        44.09         2.17 
TCGA-36-1568 TCGA-36-1576 TCGA-36-1578 TCGA-36-1581 TCGA-36-2529 TCGA-36-2530 
       28.73        30.05        27.85        24.69        35.05        33.01 
TCGA-36-2532 TCGA-36-2540 TCGA-36-2544 TCGA-36-2545 TCGA-36-2548 TCGA-36-2549 
       29.49        23.80        20.98        18.31        14.17         6.05 
TCGA-36-2551 TCGA-42-2582 TCGA-42-2591 TCGA-57-1582 TCGA-57-1584 TCGA-59-2349 
       16.14        26.04        22.39        24.03        21.14        80.12 
TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 
       34.39         2.14         5.39        44.78        11.11         8.05 
TCGA-61-1724 TCGA-61-1725 TCGA-61-1734 TCGA-61-1736 TCGA-61-1738 TCGA-61-1743 
       20.94        31.40        28.47        48.79        35.80        43.69 
TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1906 TCGA-61-1907 
        8.42         5.79        11.41        13.02        34.13        31.30 
TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1917 TCGA-61-1918 TCGA-61-1995 
       37.02        42.48        48.92        43.43        15.75         1.97 
TCGA-61-2002 TCGA-61-2003 TCGA-61-2009 TCGA-61-2012 TCGA-61-2017 TCGA-61-2087 
       17.98         3.98        39.85        30.64        45.96         4.80 
TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2111 
        4.77        51.72        71.74        61.64        58.39       125.72 
TCGA-61-2612 TCGA-61-2614 
        6.35         8.58 

  8P LOSS MUTATED 8P LOSS WILD-TYPE 
             0.26              0.36 
  8P LOSS MUTATED 8P LOSS WILD-TYPE 
           180.16            151.99 
  8P LOSS MUTATED 8P LOSS WILD-TYPE 
           24.360            31.055 
[1] "0.3 - 180.2 (24.4)" "0.4 - 152.0 (31.1)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
  "8P LOSS MUTATED" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED"   "8P LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "8P LOSS MUTATED"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE"   "8P LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"8P LOSS WILD-TYPE"   "8P LOSS MUTATED" "8P LOSS WILD-TYPE" 
[1] "hr=" "1.2"
D55V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  8P LOSS MUTATED         2   257                0
  8P LOSS WILD-TYPE       0   291                2
D55V3, multiclass
                  clus
vv                 8P LOSS MUTATED 8P LOSS WILD-TYPE
  OMENTUM                        2                 0
  OVARY                        257               291
  PERITONEUM OVARY               0                 2
D55V4, continuous
D55V5, binary
                   cls
clus                  0   1
  8P LOSS MUTATED     1 263
  8P LOSS WILD-TYPE   2 296
[1] "tbl2"
                   cls
clus                [,1] [,2]
  8P LOSS MUTATED      1  263
  8P LOSS WILD-TYPE    2  296
     clus
vv    8P LOSS MUTATED 8P LOSS WILD-TYPE
  NO                1                 2
  YES             263               296
                   vv
clus                R0 R1 R2
  8P LOSS MUTATED    5 12  2
  8P LOSS WILD-TYPE  9 14  0
D55V6, multiclass
    clus
vv   8P LOSS MUTATED 8P LOSS WILD-TYPE
  R0               5                 9
  R1              12                14
  R2               2                 0

Clustering(56) Variable = 8Q LOSS MUTATION ANALYSIS
D56V1, survival
                   sevent
clus2                 0   1
  8Q LOSS MUTATED    36  46
  8Q LOSS WILD-TYPE 225 240
  8Q LOSS MUTATED 8Q LOSS WILD-TYPE 
               82               465 
  8Q LOSS MUTATED 8Q LOSS WILD-TYPE 
               46               240 
$`8Q LOSS MUTATED`
TCGA-04-1332 TCGA-04-1346 TCGA-04-1371 TCGA-04-1514 TCGA-04-1517 TCGA-04-1655 
       41.00        65.49        82.36        56.55        19.99        45.34 
TCGA-09-0366 TCGA-09-2051 TCGA-09-2054 TCGA-13-0725 TCGA-13-0730 TCGA-13-0757 
       57.73        63.09        20.91        12.39        17.79        11.18 
TCGA-13-0762 TCGA-13-0885 TCGA-13-0887 TCGA-13-0901 TCGA-13-0913 TCGA-13-0920 
       32.25        91.40        66.64        19.36        29.98        13.81 
TCGA-13-1407 TCGA-13-1483 TCGA-13-1510 TCGA-13-2061 TCGA-13-2065 TCGA-20-1684 
        6.05        29.39         2.56        10.78         8.75        19.07 
TCGA-23-1021 TCGA-23-1027 TCGA-23-1032 TCGA-23-1114 TCGA-23-1122 TCGA-23-1123 
       47.54        31.73         2.24        68.68        39.09        33.47 
TCGA-23-1809 TCGA-24-0980 TCGA-24-0982 TCGA-24-1413 TCGA-24-1416 TCGA-24-1424 
        0.53         7.66        22.32         6.31         6.38         6.02 
TCGA-24-1427 TCGA-24-1431 TCGA-24-1544 TCGA-24-1548 TCGA-24-1614 TCGA-24-1842 
        4.80        19.17        26.96        16.21        48.33         8.32 
TCGA-24-1850 TCGA-24-1928 TCGA-24-2030 TCGA-24-2254 TCGA-24-2261 TCGA-24-2267 
        5.49        11.05        53.95        57.07         0.79        47.54 
TCGA-24-2280 TCGA-25-1318 TCGA-25-1319 TCGA-25-1322 TCGA-25-1626 TCGA-25-1630 
       70.45        34.98        65.00         2.99        15.78         7.86 
TCGA-25-1634 TCGA-25-1635 TCGA-25-1871 TCGA-25-2393 TCGA-25-2400 TCGA-25-2409 
       35.54        51.22        24.99        38.04        42.02        26.96 
TCGA-29-1770 TCGA-29-1775 TCGA-29-2428 TCGA-30-1855 TCGA-31-1955 TCGA-36-1571 
       24.36        12.36        45.11         2.47        42.51        22.85 
TCGA-36-1575 TCGA-36-2537 TCGA-36-2547 TCGA-36-2552 TCGA-42-2587 TCGA-42-2589 
        8.55        25.91        20.52        11.47        23.74         7.56 
TCGA-57-1994 TCGA-59-2352 TCGA-61-1727 TCGA-61-1733 TCGA-61-1904 TCGA-61-2097 
       25.02         9.40        18.54        31.76         9.07        60.62 
TCGA-61-2101 TCGA-61-2102 TCGA-61-2110 TCGA-61-2113 
       55.50         6.48        44.52        22.22 

$`8Q LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 TCGA-04-1342 
       40.24         1.81        49.15         2.01        46.62        18.51 
TCGA-04-1343 TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 TCGA-04-1351 
       11.87        63.06        48.76        21.57        63.98        65.46 
TCGA-04-1356 TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 
       49.28        32.52        44.32        33.67        76.54        71.47 
TCGA-04-1516 TCGA-04-1525 TCGA-04-1530 TCGA-04-1536 TCGA-04-1542 TCGA-04-1638 
       41.59        38.37       119.08        29.06        84.20        55.40 
TCGA-04-1644 TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 
       48.89        27.88        28.64        64.64        36.23        31.86 
TCGA-04-1654 TCGA-09-0364 TCGA-09-0365 TCGA-09-0367 TCGA-09-0369 TCGA-09-1659 
       47.70        29.16         9.47        17.95        35.54         9.96 
TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 
       38.43        89.33        74.89        41.59        57.57        61.87 
TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 
       55.36        30.48        17.98         5.85         3.02         8.55 
TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 
       97.55         6.15         6.12        35.15         4.50       112.37 
TCGA-09-2050 TCGA-09-2053 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 
       71.11        39.75        26.93        12.46        54.31        25.91 
TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 
       81.47        18.48        33.24        32.28        11.70         3.88 
TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 
       35.41        35.80        15.12        19.86         6.21        24.59 
TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 TCGA-13-0726 TCGA-13-0727 TCGA-13-0751 
       44.55        39.58         2.73        31.07        15.19        55.17 
TCGA-13-0755 TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 TCGA-13-0764 TCGA-13-0766 
        2.47        11.38        11.54        34.06        31.04        21.40 
TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 
        8.42        38.93        36.72        28.70        30.35        19.56 
TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 
        8.71         7.79         8.12         8.28         8.19        43.82 
TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 TCGA-13-0886 
       35.28        35.28        13.61        68.91       107.18        74.27 
TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 
       70.39        61.81        67.99        69.01        43.36        57.47 
TCGA-13-0899 TCGA-13-0900 TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 
       56.15        57.07        47.38        48.33        47.84        44.94 
TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0916 TCGA-13-0919 
       44.84        37.08        27.68        34.06        21.14        14.89 
TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 
        4.64         6.41         6.08        10.88         6.61         7.36 
TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 
        5.92         6.84         4.70         4.21         5.33        54.61 
TCGA-13-1481 TCGA-13-1482 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 
       87.06        61.71        98.04        20.68        22.39        70.82 
TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 
       82.88        52.44        73.55        38.17        49.22         4.24 
TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 
       54.31        37.61        38.37        13.97        32.84        16.57 
TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 TCGA-13-1511 TCGA-13-1512 
        4.21         4.41         4.77         4.14         3.88         3.09 
TCGA-13-2057 TCGA-13-2059 TCGA-13-2060 TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 
       14.24        12.23         8.58         6.28        23.05        25.94 
TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 TCGA-20-1683 TCGA-20-1685 TCGA-20-1686 
       26.20        72.20        27.48        25.38        16.67         2.93 
TCGA-20-1687 TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1028 
        2.66        42.51        40.54        15.39        26.83        49.41 
TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 
        8.81        29.10        18.87        51.35        54.51         3.22 
TCGA-23-1113 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 TCGA-23-1120 
       31.20         4.57        33.30        86.01       129.96         4.27 
TCGA-23-1121 TCGA-23-1124 TCGA-23-2072 TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 
        6.38        58.13        24.95       115.89        87.48        91.66 
TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 
       77.00        49.84         2.76         4.70         4.50         7.63 
TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 TCGA-24-1103 TCGA-24-1104 
       19.63        11.64        21.80        41.56        54.08        63.55 
TCGA-24-1105 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 
       47.41         7.82         7.99         7.86         0.76         6.25 
TCGA-24-1425 TCGA-24-1426 TCGA-24-1428 TCGA-24-1430 TCGA-24-1434 TCGA-24-1435 
        5.95         5.36        17.36        28.34        18.67        43.53 
TCGA-24-1436 TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 TCGA-24-1469 
        8.55        72.92        12.46        45.14       105.99         9.11 
TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1545 TCGA-24-1546 TCGA-24-1549 
        3.42         1.18        22.19        57.37        64.27        56.58 
TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 
       41.06        51.91        41.39        58.09        88.50        70.62 
TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 
       39.88        19.53        44.09        45.50        47.70        25.87 
TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 TCGA-24-1616 TCGA-24-1843 
       10.26        17.23        90.15        88.34        38.24         3.48 
TCGA-24-1844 TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 TCGA-24-1920 
        3.72         3.81         4.37        11.28         5.75         9.80 
TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 
       22.65        30.21        16.41        81.11         4.87       151.99 
TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2033 
       44.84        58.16        34.82       109.68        14.43        18.48 
TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2260 TCGA-24-2262 TCGA-24-2271 
       28.18        64.01        44.48        36.16         0.36        31.63 
TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 
       44.58         0.82        67.36        36.23        16.64        33.11 
TCGA-24-2297 TCGA-24-2298 TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 
       55.86        53.26         1.02        26.93        31.99        51.06 
TCGA-25-1316 TCGA-25-1317 TCGA-25-1320 TCGA-25-1321 TCGA-25-1323 TCGA-25-1329 
       37.02         1.02        36.95        33.96        12.00         2.96 
TCGA-25-1623 TCGA-25-1625 TCGA-25-1627 TCGA-25-1628 TCGA-25-1631 TCGA-25-1632 
       18.58        18.02         0.36        20.58         0.30        56.94 
TCGA-25-1633 TCGA-25-1870 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 
       60.59        14.93        18.05        85.05        13.02        49.05 
TCGA-25-2392 TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2401 
        1.02         3.02        12.00        45.01        19.99         2.96 
TCGA-25-2404 TCGA-25-2408 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 TCGA-29-1693 
       29.00        30.97        78.87        44.71        47.18       101.75 
TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 
       38.53         0.79        33.70        31.17        68.28         0.53 
TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 
       16.90        18.64        59.67        18.25        41.95        29.23 
TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 
       34.62        17.00        85.68        66.77        62.93        39.09 
TCGA-29-1768 TCGA-29-1769 TCGA-29-1771 TCGA-29-1774 TCGA-29-1776 TCGA-29-1777 
       31.23        22.98        22.52        17.29        11.84        12.30 
TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 
       14.93         8.35         7.20         5.36        34.62        86.17 
TCGA-29-2425 TCGA-29-2427 TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 TCGA-29-2434 
       65.00        62.47         4.87        42.25        11.84        11.47 
TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 TCGA-30-1856 TCGA-30-1857 
        9.76        38.07        51.91        36.26        15.68         0.26 
TCGA-30-1859 TCGA-30-1860 TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 
       48.07        44.91        34.78         6.08        36.62         1.18 
TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 
       57.57        24.26        30.05        48.79        45.57        30.18 
TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 
       18.77        22.45         6.71        44.09         2.17        28.73 
TCGA-36-1569 TCGA-36-1570 TCGA-36-1574 TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 
       29.06        21.53        22.55        30.05        25.74        27.85 
TCGA-36-1580 TCGA-36-1581 TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 
       24.23        24.69        35.05        33.01        29.49        29.79 
TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 
       25.08        23.80        21.60         2.24        20.98        18.31 
TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 TCGA-42-2582 TCGA-42-2588 TCGA-42-2590 
       14.17         6.05        16.14        26.04         9.44         7.46 
TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 TCGA-57-1585 
       22.39         1.48        24.03        11.38        21.14         1.74 
TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 
       22.32        28.96        25.05       180.16        80.12        22.32 
TCGA-59-2351 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 
      116.12        34.39         2.14         5.39        44.78        11.11 
TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 TCGA-61-1728 TCGA-61-1730 TCGA-61-1734 
        8.05        20.94        31.40        27.88         4.34        28.47 
TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 
       48.79        44.84        35.80         2.43        33.67        43.69 
TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1906 
        1.41         8.42         5.79        11.41        13.02        34.13 
TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 
       31.30        37.02        42.48        48.92        56.58        67.73 
TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 
       43.43        15.75        38.17         1.97         5.52        14.50 
TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 
       17.98         3.98        30.61        39.85        30.64         1.18 
TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 
       45.96        45.40         4.80         4.77        51.72        71.74 
TCGA-61-2095 TCGA-61-2096 TCGA-61-2098 TCGA-61-2104 TCGA-61-2109 TCGA-61-2111 
       61.64        58.39        65.49        76.83        20.68       125.72 
TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
        6.35        31.07         8.58 

  8Q LOSS MUTATED 8Q LOSS WILD-TYPE 
             0.53              0.26 
  8Q LOSS MUTATED 8Q LOSS WILD-TYPE 
            91.40            180.16 
  8Q LOSS MUTATED 8Q LOSS WILD-TYPE 
           23.295            29.000 
[1] "0.5 - 91.4 (23.3)"  "0.3 - 180.2 (29.0)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "8Q LOSS MUTATED"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "8Q LOSS MUTATED"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED"   "8Q LOSS MUTATED" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "8Q LOSS MUTATED"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "8Q LOSS MUTATED"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED"   "8Q LOSS MUTATED" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "8Q LOSS MUTATED"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "8Q LOSS MUTATED"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED"   "8Q LOSS MUTATED" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" "8Q LOSS WILD-TYPE"   "8Q LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" "8Q LOSS WILD-TYPE" 
[1] "hr=" "1.3"
D56V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  8Q LOSS MUTATED         0    82                0
  8Q LOSS WILD-TYPE       2   466                2
D56V3, multiclass
                  clus
vv                 8Q LOSS MUTATED 8Q LOSS WILD-TYPE
  OMENTUM                        0                 2
  OVARY                         82               466
  PERITONEUM OVARY               0                 2
D56V4, continuous
D56V5, binary
                   cls
clus                  0   1
  8Q LOSS MUTATED     0  85
  8Q LOSS WILD-TYPE   3 474
[1] "tbl2"
                   cls
clus                [,1] [,2]
  8Q LOSS MUTATED      0   85
  8Q LOSS WILD-TYPE    3  474
     clus
vv    8Q LOSS MUTATED 8Q LOSS WILD-TYPE
  NO                0                 3
  YES              85               474
                   vv
clus                R0 R1 R2
  8Q LOSS MUTATED    3  3  0
  8Q LOSS WILD-TYPE 11 23  2
D56V6, multiclass
    clus
vv   8Q LOSS MUTATED 8Q LOSS WILD-TYPE
  R0               3                11
  R1               3                23
  R2               0                 2

Clustering(57) Variable = 9P LOSS MUTATION ANALYSIS
D57V1, survival
                   sevent
clus2                 0   1
  9P LOSS MUTATED   113 136
  9P LOSS WILD-TYPE 148 150
  9P LOSS MUTATED 9P LOSS WILD-TYPE 
              249               298 
  9P LOSS MUTATED 9P LOSS WILD-TYPE 
              136               150 
$`9P LOSS MUTATED`
TCGA-04-1332 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 TCGA-04-1343 TCGA-04-1346 
       41.00        49.15         2.01        46.62        11.87        65.49 
TCGA-04-1347 TCGA-04-1349 TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 
       63.06        21.57        63.98        65.46        49.28        32.52 
TCGA-04-1362 TCGA-04-1364 TCGA-04-1371 TCGA-04-1517 TCGA-04-1525 TCGA-04-1536 
       44.32        33.67        82.36        19.99        38.37        29.06 
TCGA-04-1542 TCGA-04-1638 TCGA-04-1646 TCGA-04-1649 TCGA-04-1652 TCGA-09-0364 
       84.20        55.40        27.88        64.64        31.86        29.16 
TCGA-09-0365 TCGA-09-0367 TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 
        9.47        17.95        35.54         9.96        38.43        89.33 
TCGA-09-1665 TCGA-09-1667 TCGA-09-1669 TCGA-09-1670 TCGA-09-1675 TCGA-09-2044 
       41.59        61.87        30.48        17.98        97.55         6.12 
TCGA-09-2049 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0927 
      112.37        39.75        20.91        26.93        12.46        81.47 
TCGA-10-0930 TCGA-10-0931 TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0724 
       33.24        32.28        19.86         6.21        24.59         2.73 
TCGA-13-0760 TCGA-13-0762 TCGA-13-0764 TCGA-13-0795 TCGA-13-0800 TCGA-13-0803 
       11.54        32.25        31.04        19.56         8.12        43.82 
TCGA-13-0804 TCGA-13-0805 TCGA-13-0883 TCGA-13-0885 TCGA-13-0886 TCGA-13-0888 
       35.28        35.28        68.91        91.40        74.27        70.39 
TCGA-13-0889 TCGA-13-0890 TCGA-13-0900 TCGA-13-0904 TCGA-13-0908 TCGA-13-0921 
       61.81        67.99        57.07        48.33        44.84         4.64 
TCGA-13-0924 TCGA-13-1403 TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 
        6.08        10.88         6.05         5.92         6.84         4.70 
TCGA-13-1411 TCGA-13-1412 TCGA-13-1481 TCGA-13-1483 TCGA-13-1485 TCGA-13-1487 
        4.21         5.33        87.06        29.39        20.68        22.39 
TCGA-13-1489 TCGA-13-1491 TCGA-13-1494 TCGA-13-1495 TCGA-13-1500 TCGA-13-1509 
       82.88        52.44        38.17        49.22        13.97         4.14 
TCGA-13-2057 TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 TCGA-20-1682 TCGA-20-1684 
       14.24         8.58        10.78         8.75        27.48        19.07 
TCGA-20-1685 TCGA-23-1021 TCGA-23-1022 TCGA-23-1027 TCGA-23-1028 TCGA-23-1030 
       16.67        47.54        42.51        31.73        49.41        29.10 
TCGA-23-1031 TCGA-23-1114 TCGA-23-1116 TCGA-23-1118 TCGA-23-1119 TCGA-23-2072 
       18.87        68.68         4.57        86.01       129.96        24.95 
TCGA-23-2081 TCGA-23-2643 TCGA-23-2645 TCGA-24-0982 TCGA-24-1105 TCGA-24-1413 
       77.00         4.70         4.50        22.32        47.41         6.31 
TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1426 TCGA-24-1427 TCGA-24-1430 
        7.99         7.86         0.76         5.36         4.80        28.34 
TCGA-24-1431 TCGA-24-1463 TCGA-24-1464 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 
       19.17        72.92        12.46        57.37        64.27        16.21 
TCGA-24-1549 TCGA-24-1550 TCGA-24-1560 TCGA-24-1563 TCGA-24-1564 TCGA-24-1603 
       56.58        41.06        44.09        47.70        25.87        90.15 
TCGA-24-1604 TCGA-24-1843 TCGA-24-1930 TCGA-24-2019 TCGA-24-2023 TCGA-24-2024 
       88.34         3.48        81.11         4.87        44.84        58.16 
TCGA-24-2029 TCGA-24-2030 TCGA-24-2035 TCGA-24-2036 TCGA-24-2260 TCGA-24-2261 
       14.43        53.95        28.18        64.01        36.16         0.79 
TCGA-24-2267 TCGA-24-2293 TCGA-24-2295 TCGA-25-1312 TCGA-25-1314 TCGA-25-1316 
       47.54        16.64        33.11         1.02        31.99        37.02 
TCGA-25-1317 TCGA-25-1318 TCGA-25-1321 TCGA-25-1323 TCGA-25-1625 TCGA-25-1627 
        1.02        34.98        33.96        12.00        18.02         0.36 
TCGA-25-1633 TCGA-25-1634 TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 TCGA-25-2392 
       60.59        35.54        14.93        24.99        18.05         1.02 
TCGA-25-2393 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 TCGA-29-1688 TCGA-29-1693 
       38.04        19.99        42.02         2.96        78.87       101.75 
TCGA-29-1694 TCGA-29-1695 TCGA-29-1698 TCGA-29-1699 TCGA-29-1702 TCGA-29-1705 
       38.53         0.79        68.28         0.53        18.64        18.25 
TCGA-29-1707 TCGA-29-1710 TCGA-29-1766 TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 
       41.95        29.23        39.09        24.36        22.52        17.29 
TCGA-29-1775 TCGA-29-1783 TCGA-29-2425 TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 
       12.36         7.20        65.00        11.47         9.76        38.07 
TCGA-30-1718 TCGA-30-1853 TCGA-30-1856 TCGA-30-1857 TCGA-30-1861 TCGA-30-1866 
       51.91        36.26        15.68         0.26        34.78        36.62 
TCGA-30-1880 TCGA-30-1891 TCGA-31-1953 TCGA-31-1955 TCGA-31-1959 TCGA-36-1569 
       57.57        30.05         6.71        42.51         2.17        29.06 
TCGA-36-1571 TCGA-36-1576 TCGA-36-1580 TCGA-36-2529 TCGA-36-2537 TCGA-36-2540 
       22.85        30.05        24.23        35.05        25.91        23.80 
TCGA-36-2542 TCGA-36-2544 TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 TCGA-36-2552 
       21.60        20.98        20.52        14.17         6.05        11.47 
TCGA-42-2587 TCGA-42-2589 TCGA-42-2590 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 
       23.74         7.56         7.46         1.48        24.03        11.38 
TCGA-57-1585 TCGA-57-1992 TCGA-57-1994 TCGA-59-2351 TCGA-59-2352 TCGA-59-2355 
        1.74        28.96        25.02       116.12         9.40         2.14 
TCGA-59-2363 TCGA-59-2372 TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 TCGA-61-1736 
        5.39        44.78        27.88         4.34        31.76        48.79 
TCGA-61-1740 TCGA-61-1899 TCGA-61-1900 TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 
        2.43         8.42         5.79        34.13        31.30        37.02 
TCGA-61-1914 TCGA-61-1915 TCGA-61-1918 TCGA-61-1919 TCGA-61-1995 TCGA-61-2000 
       56.58        67.73        15.75        38.17         1.97        14.50 
TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 
       17.98         3.98        30.61        39.85        30.64         1.18 
TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 
       61.64        58.39        60.62        65.49        55.50         6.48 
TCGA-61-2104 TCGA-61-2109 TCGA-61-2113 
       76.83        20.68        22.22 

$`9P LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1335 TCGA-04-1342 TCGA-04-1348 TCGA-04-1365 TCGA-04-1367 
       40.24         1.81        18.51        48.76        76.54        71.47 
TCGA-04-1514 TCGA-04-1516 TCGA-04-1530 TCGA-04-1644 TCGA-04-1648 TCGA-04-1651 
       56.55        41.59       119.08        48.89        28.64        36.23 
TCGA-04-1654 TCGA-04-1655 TCGA-09-0366 TCGA-09-1664 TCGA-09-1666 TCGA-09-1668 
       47.70        45.34        57.73        74.89        57.57        55.36 
TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 TCGA-09-2043 TCGA-09-2045 TCGA-09-2048 
        5.85         3.02         8.55         6.15        35.15         4.50 
TCGA-09-2050 TCGA-09-2051 TCGA-10-0925 TCGA-10-0926 TCGA-10-0928 TCGA-10-0933 
       71.11        63.09        54.31        25.91        18.48        11.70 
TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-13-0720 TCGA-13-0723 
        3.88        35.41        35.80        15.12        44.55        39.58 
TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 
       12.39        31.07        15.19        17.79        55.17         2.47 
TCGA-13-0757 TCGA-13-0758 TCGA-13-0761 TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 
       11.18        11.38        34.06        21.40         8.42        38.93 
TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0797 TCGA-13-0799 TCGA-13-0801 
       36.72        28.70        30.35         8.71         7.79         8.28 
TCGA-13-0802 TCGA-13-0807 TCGA-13-0884 TCGA-13-0887 TCGA-13-0891 TCGA-13-0893 
        8.19        13.61       107.18        66.64        69.01        43.36 
TCGA-13-0897 TCGA-13-0899 TCGA-13-0901 TCGA-13-0903 TCGA-13-0905 TCGA-13-0906 
       57.47        56.15        19.36        47.38        47.84        44.94 
TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 
       37.08        27.68        34.06        29.98        21.14        14.89 
TCGA-13-0920 TCGA-13-0923 TCGA-13-1404 TCGA-13-1405 TCGA-13-1477 TCGA-13-1482 
       13.81         6.41         6.61         7.36        54.61        61.71 
TCGA-13-1484 TCGA-13-1488 TCGA-13-1492 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 
       98.04        70.82        73.55         4.24        54.31        37.61 
TCGA-13-1499 TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 
       38.37        32.84        16.57         4.21         4.41         4.77 
TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2059 TCGA-13-2071 TCGA-20-0987 
        2.56         3.88         3.09        12.23         6.28        23.05 
TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1683 TCGA-20-1686 TCGA-20-1687 
       25.94        26.20        72.20        25.38         2.93         2.66 
TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1029 TCGA-23-1032 TCGA-23-1109 
       40.54        15.39        26.83         8.81         2.24        51.35 
TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 TCGA-23-1117 TCGA-23-1120 TCGA-23-1121 
       54.51         3.22        31.20        33.30         4.27         6.38 
TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 TCGA-23-2077 TCGA-23-2078 
       39.09        33.47        58.13         0.53       115.89        87.48 
TCGA-23-2079 TCGA-23-2084 TCGA-23-2641 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 
       91.66        49.84         2.76         7.63        19.63        11.64 
TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 TCGA-24-1103 TCGA-24-1104 TCGA-24-1416 
       21.80        41.56         7.66        54.08        63.55         6.38 
TCGA-24-1417 TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 TCGA-24-1428 TCGA-24-1434 
        7.82         6.25         6.02         5.95        17.36        18.67 
TCGA-24-1435 TCGA-24-1436 TCGA-24-1466 TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 
       43.53         8.55        45.14       105.99         9.11         3.42 
TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 
        1.18        22.19        26.96        51.91        41.39        58.09 
TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 TCGA-24-1562 TCGA-24-1565 
       88.50        70.62        39.88        19.53        45.50        10.26 
TCGA-24-1567 TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 TCGA-24-1844 TCGA-24-1845 
       17.23        48.33        38.24         8.32         3.72         3.81 
TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 
        4.37        11.28         5.75         5.49         9.80        22.65 
TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 TCGA-24-2020 TCGA-24-2026 TCGA-24-2027 
       30.21        16.41        11.05       151.99        34.82       109.68 
TCGA-24-2033 TCGA-24-2038 TCGA-24-2254 TCGA-24-2262 TCGA-24-2271 TCGA-24-2280 
       18.48        44.48        57.07         0.36        31.63        70.45 
TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2297 TCGA-24-2298 
       44.58         0.82        67.36        36.23        55.86        53.26 
TCGA-25-1313 TCGA-25-1315 TCGA-25-1319 TCGA-25-1320 TCGA-25-1322 TCGA-25-1329 
       26.93        51.06        65.00        36.95         2.99         2.96 
TCGA-25-1623 TCGA-25-1626 TCGA-25-1628 TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 
       18.58        15.78        20.58         7.86         0.30        56.94 
TCGA-25-1635 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2396 TCGA-25-2397 
       51.22        85.05        13.02        49.05         3.02        12.00 
TCGA-25-2398 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1690 TCGA-29-1691 
       45.01        29.00        30.97        26.96        44.71        47.18 
TCGA-29-1696 TCGA-29-1697 TCGA-29-1701 TCGA-29-1703 TCGA-29-1711 TCGA-29-1761 
       33.70        31.17        16.90        59.67        34.62        17.00 
TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 TCGA-29-1768 TCGA-29-1769 TCGA-29-1776 
       85.68        66.77        62.93        31.23        22.98        11.84 
TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 
       12.30        14.93         8.35         5.36        34.62        86.17 
TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 TCGA-30-1855 
       62.47        45.11         4.87        42.25        11.84         2.47 
TCGA-30-1859 TCGA-30-1860 TCGA-30-1862 TCGA-30-1867 TCGA-30-1887 TCGA-30-1892 
       48.07        44.91         6.08         1.18        24.26        48.79 
TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 TCGA-31-1956 TCGA-36-1568 
       45.57        30.18        18.77        22.45        44.09        28.73 
TCGA-36-1570 TCGA-36-1574 TCGA-36-1575 TCGA-36-1577 TCGA-36-1578 TCGA-36-1581 
       21.53        22.55         8.55        25.74        27.85        24.69 
TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2538 TCGA-36-2543 TCGA-36-2545 
       33.01        29.49        29.79        25.08         2.24        18.31 
TCGA-36-2551 TCGA-42-2582 TCGA-42-2588 TCGA-42-2591 TCGA-57-1584 TCGA-57-1586 
       16.14        26.04         9.44        22.39        21.14        22.32 
TCGA-57-1993 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2354 TCGA-61-1721 
       25.05       180.16        80.12        22.32        34.39        11.11 
TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1734 TCGA-61-1737 
        8.05        20.94        31.40        18.54        28.47        44.84 
TCGA-61-1738 TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 TCGA-61-1901 TCGA-61-1903 
       35.80        33.67        43.69         1.41        11.41        13.02 
TCGA-61-1904 TCGA-61-1911 TCGA-61-1913 TCGA-61-1917 TCGA-61-1998 TCGA-61-2017 
        9.07        42.48        48.92        43.43         5.52        45.96 
TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2110 
       45.40         4.80         4.77        51.72        71.74        44.52 
TCGA-61-2111 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
      125.72         6.35        31.07         8.58 

  9P LOSS MUTATED 9P LOSS WILD-TYPE 
             0.26              0.30 
  9P LOSS MUTATED 9P LOSS WILD-TYPE 
           129.96            180.16 
  9P LOSS MUTATED 9P LOSS WILD-TYPE 
            28.96             27.32 
[1] "0.3 - 130.0 (29.0)" "0.3 - 180.2 (27.3)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" "9P LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"9P LOSS WILD-TYPE"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED"   "9P LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
  "9P LOSS MUTATED" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE"   "9P LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" "9P LOSS WILD-TYPE" 
[1] "hr=" "1.1"
D57V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  9P LOSS MUTATED         1   250                2
  9P LOSS WILD-TYPE       1   298                0
D57V3, multiclass
                  clus
vv                 9P LOSS MUTATED 9P LOSS WILD-TYPE
  OMENTUM                        1                 1
  OVARY                        250               298
  PERITONEUM OVARY               2                 0
D57V4, continuous
D57V5, binary
                   cls
clus                  0   1
  9P LOSS MUTATED     2 257
  9P LOSS WILD-TYPE   1 302
[1] "tbl2"
                   cls
clus                [,1] [,2]
  9P LOSS MUTATED      2  257
  9P LOSS WILD-TYPE    1  302
     clus
vv    9P LOSS MUTATED 9P LOSS WILD-TYPE
  NO                2                 1
  YES             257               302
                   vv
clus                R0 R1 R2
  9P LOSS MUTATED    8  9  1
  9P LOSS WILD-TYPE  6 17  1
D57V6, multiclass
    clus
vv   9P LOSS MUTATED 9P LOSS WILD-TYPE
  R0               8                 6
  R1               9                17
  R2               1                 1

Clustering(58) Variable = 9Q LOSS MUTATION ANALYSIS
D58V1, survival
                   sevent
clus2                 0   1
  9Q LOSS MUTATED   125 147
  9Q LOSS WILD-TYPE 136 139
  9Q LOSS MUTATED 9Q LOSS WILD-TYPE 
              272               275 
  9Q LOSS MUTATED 9Q LOSS WILD-TYPE 
              147               139 
$`9Q LOSS MUTATED`
TCGA-04-1332 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 TCGA-04-1343 TCGA-04-1346 
       41.00        49.15         2.01        46.62        11.87        65.49 
TCGA-04-1347 TCGA-04-1349 TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 
       63.06        21.57        63.98        65.46        49.28        32.52 
TCGA-04-1362 TCGA-04-1364 TCGA-04-1371 TCGA-04-1517 TCGA-04-1525 TCGA-04-1542 
       44.32        33.67        82.36        19.99        38.37        84.20 
TCGA-04-1638 TCGA-04-1646 TCGA-04-1649 TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 
       55.40        27.88        64.64        45.34        29.16         9.47 
TCGA-09-0367 TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 TCGA-09-1667 TCGA-09-1669 
       17.95        35.54         9.96        38.43        61.87        30.48 
TCGA-09-1670 TCGA-09-1674 TCGA-09-1675 TCGA-09-2044 TCGA-09-2049 TCGA-09-2053 
       17.98         8.55        97.55         6.12       112.37        39.75 
TCGA-09-2054 TCGA-09-2055 TCGA-10-0927 TCGA-10-0930 TCGA-10-0936 TCGA-10-0938 
       20.91        26.93        81.47        33.24        35.80        19.86 
TCGA-13-0714 TCGA-13-0717 TCGA-13-0724 TCGA-13-0730 TCGA-13-0751 TCGA-13-0757 
        6.21        24.59         2.73        17.79        55.17        11.18 
TCGA-13-0760 TCGA-13-0762 TCGA-13-0764 TCGA-13-0768 TCGA-13-0793 TCGA-13-0795 
       11.54        32.25        31.04         8.42        28.70        19.56 
TCGA-13-0800 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 
        8.12        43.82        35.28        35.28        13.61        68.91 
TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 TCGA-13-0888 TCGA-13-0889 TCGA-13-0899 
      107.18        91.40        74.27        70.39        61.81        56.15 
TCGA-13-0900 TCGA-13-0904 TCGA-13-0908 TCGA-13-0913 TCGA-13-0919 TCGA-13-0921 
       57.07        48.33        44.84        29.98        14.89         4.64 
TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 
        6.41         6.08        10.88         6.05         5.92         6.84 
TCGA-13-1410 TCGA-13-1411 TCGA-13-1483 TCGA-13-1484 TCGA-13-1487 TCGA-13-1489 
        4.70         4.21        29.39        98.04        22.39        82.88 
TCGA-13-1491 TCGA-13-1495 TCGA-13-1499 TCGA-13-1500 TCGA-13-1504 TCGA-13-1507 
       52.44        49.22        38.37        13.97        16.57         4.77 
TCGA-13-1509 TCGA-13-2057 TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 TCGA-20-0990 
        4.14        14.24         8.58        10.78         8.75        25.94 
TCGA-20-1682 TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-23-1021 TCGA-23-1022 
       27.48        19.07        16.67         2.93        47.54        42.51 
TCGA-23-1028 TCGA-23-1030 TCGA-23-1031 TCGA-23-1111 TCGA-23-1114 TCGA-23-1116 
       49.41        29.10        18.87         3.22        68.68         4.57 
TCGA-23-1118 TCGA-23-1119 TCGA-23-1123 TCGA-23-2072 TCGA-23-2077 TCGA-23-2643 
       86.01       129.96        33.47        24.95       115.89         4.70 
TCGA-23-2645 TCGA-24-0968 TCGA-24-0975 TCGA-24-0979 TCGA-24-0982 TCGA-24-1105 
        4.50        19.63        21.80        41.56        22.32        47.41 
TCGA-24-1413 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1424 
        6.31         7.82         7.99         7.86         0.76         6.02 
TCGA-24-1426 TCGA-24-1431 TCGA-24-1436 TCGA-24-1464 TCGA-24-1469 TCGA-24-1471 
        5.36        19.17         8.55        12.46         9.11         1.18 
TCGA-24-1544 TCGA-24-1545 TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1558 
       26.96        57.37        16.21        56.58        41.06        19.53 
TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1603 TCGA-24-1604 
       44.09        45.50        47.70        25.87        90.15        88.34 
TCGA-24-1616 TCGA-24-1843 TCGA-24-1845 TCGA-24-1924 TCGA-24-1928 TCGA-24-1930 
       38.24         3.48         3.81        30.21        11.05        81.11 
TCGA-24-2019 TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2029 TCGA-24-2033 
        4.87        44.84        58.16        34.82        14.43        18.48 
TCGA-24-2035 TCGA-24-2260 TCGA-24-2261 TCGA-24-2267 TCGA-24-2288 TCGA-24-2293 
       28.18        36.16         0.79        47.54         0.82        16.64 
TCGA-24-2295 TCGA-25-1312 TCGA-25-1314 TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 
       33.11         1.02        31.99        37.02         1.02        34.98 
TCGA-25-1320 TCGA-25-1321 TCGA-25-1323 TCGA-25-1627 TCGA-25-1630 TCGA-25-1631 
       36.95        33.96        12.00         0.36         7.86         0.30 
TCGA-25-1633 TCGA-25-1634 TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 TCGA-25-2392 
       60.59        35.54        14.93        24.99        18.05         1.02 
TCGA-25-2393 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 TCGA-29-1688 TCGA-29-1693 
       38.04        45.01        19.99        42.02        78.87       101.75 
TCGA-29-1694 TCGA-29-1695 TCGA-29-1698 TCGA-29-1699 TCGA-29-1702 TCGA-29-1705 
       38.53         0.79        68.28         0.53        18.64        18.25 
TCGA-29-1710 TCGA-29-1761 TCGA-29-1763 TCGA-29-1766 TCGA-29-1770 TCGA-29-1771 
       29.23        17.00        66.77        39.09        24.36        22.52 
TCGA-29-1774 TCGA-29-1775 TCGA-29-1777 TCGA-29-1783 TCGA-29-2434 TCGA-30-1714 
       17.29        12.36        12.30         7.20        11.47        38.07 
TCGA-30-1853 TCGA-30-1856 TCGA-30-1857 TCGA-30-1861 TCGA-30-1866 TCGA-30-1867 
       36.26        15.68         0.26        34.78        36.62         1.18 
TCGA-30-1880 TCGA-31-1944 TCGA-31-1950 TCGA-31-1953 TCGA-31-1955 TCGA-36-1569 
       57.57        45.57        18.77         6.71        42.51        29.06 
TCGA-36-1571 TCGA-36-1576 TCGA-36-1580 TCGA-36-1581 TCGA-36-2529 TCGA-36-2537 
       22.85        30.05        24.23        24.69        35.05        25.91 
TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 
        2.24        20.98        18.31        20.52        14.17         6.05 
TCGA-36-2552 TCGA-42-2587 TCGA-42-2589 TCGA-42-2590 TCGA-42-2593 TCGA-57-1582 
       11.47        23.74         7.56         7.46         1.48        24.03 
TCGA-57-1585 TCGA-57-1992 TCGA-59-2351 TCGA-59-2352 TCGA-59-2355 TCGA-59-2363 
        1.74        28.96       116.12         9.40         2.14         5.39 
TCGA-59-2372 TCGA-61-1730 TCGA-61-1733 TCGA-61-1736 TCGA-61-1741 TCGA-61-1743 
       44.78         4.34        31.76        48.79        33.67        43.69 
TCGA-61-1899 TCGA-61-1904 TCGA-61-1906 TCGA-61-1914 TCGA-61-1915 TCGA-61-1918 
        8.42         9.07        34.13        56.58        67.73        15.75 
TCGA-61-1919 TCGA-61-1995 TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 TCGA-61-2009 
       38.17         1.97        14.50        17.98         3.98        39.85 
TCGA-61-2012 TCGA-61-2016 TCGA-61-2094 TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 
       30.64         1.18        71.74        58.39        60.62        65.49 
TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 
       55.50         6.48        76.83        44.52       125.72        22.22 
TCGA-61-2613 TCGA-61-2614 
       31.07         8.58 

$`9Q LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1335 TCGA-04-1342 TCGA-04-1348 TCGA-04-1365 TCGA-04-1367 
       40.24         1.81        18.51        48.76        76.54        71.47 
TCGA-04-1514 TCGA-04-1516 TCGA-04-1530 TCGA-04-1536 TCGA-04-1644 TCGA-04-1648 
       56.55        41.59       119.08        29.06        48.89        28.64 
TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 TCGA-09-0366 TCGA-09-1662 TCGA-09-1664 
       36.23        31.86        47.70        57.73        89.33        74.89 
TCGA-09-1665 TCGA-09-1666 TCGA-09-1668 TCGA-09-1672 TCGA-09-1673 TCGA-09-2043 
       41.59        57.57        55.36         5.85         3.02         6.15 
TCGA-09-2045 TCGA-09-2048 TCGA-09-2050 TCGA-09-2051 TCGA-09-2056 TCGA-10-0925 
       35.15         4.50        71.11        63.09        12.46        54.31 
TCGA-10-0926 TCGA-10-0928 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 
       25.91        18.48        32.28        11.70         3.88        35.41 
TCGA-10-0937 TCGA-13-0720 TCGA-13-0723 TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 
       15.12        44.55        39.58        12.39        31.07        15.19 
TCGA-13-0755 TCGA-13-0758 TCGA-13-0761 TCGA-13-0766 TCGA-13-0791 TCGA-13-0792 
        2.47        11.38        34.06        21.40        38.93        36.72 
TCGA-13-0794 TCGA-13-0797 TCGA-13-0799 TCGA-13-0801 TCGA-13-0802 TCGA-13-0887 
       30.35         8.71         7.79         8.28         8.19        66.64 
TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 TCGA-13-0901 TCGA-13-0903 
       67.99        69.01        43.36        57.47        19.36        47.38 
TCGA-13-0905 TCGA-13-0906 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0916 
       47.84        44.94        37.08        27.68        34.06        21.14 
TCGA-13-0920 TCGA-13-1404 TCGA-13-1405 TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 
       13.81         6.61         7.36         5.33        54.61        87.06 
TCGA-13-1482 TCGA-13-1485 TCGA-13-1488 TCGA-13-1492 TCGA-13-1494 TCGA-13-1496 
       61.71        20.68        70.82        73.55        38.17         4.24 
TCGA-13-1497 TCGA-13-1498 TCGA-13-1501 TCGA-13-1505 TCGA-13-1506 TCGA-13-1510 
       54.31        37.61        32.84         4.21         4.41         2.56 
TCGA-13-1511 TCGA-13-1512 TCGA-13-2059 TCGA-13-2071 TCGA-20-0987 TCGA-20-0991 
        3.88         3.09        12.23         6.28        23.05        26.20 
TCGA-20-0996 TCGA-20-1683 TCGA-20-1687 TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 
       72.20        25.38         2.66        40.54        15.39        26.83 
TCGA-23-1027 TCGA-23-1029 TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 TCGA-23-1113 
       31.73         8.81         2.24        51.35        54.51        31.20 
TCGA-23-1117 TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1124 TCGA-23-1809 
       33.30         4.27         6.38        39.09        58.13         0.53 
TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-24-0966 
       87.48        91.66        77.00        49.84         2.76         7.63 
TCGA-24-0970 TCGA-24-0980 TCGA-24-1103 TCGA-24-1104 TCGA-24-1416 TCGA-24-1423 
       11.64         7.66        54.08        63.55         6.38         6.25 
TCGA-24-1425 TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 TCGA-24-1434 TCGA-24-1435 
        5.95         4.80        17.36        28.34        18.67        43.53 
TCGA-24-1463 TCGA-24-1466 TCGA-24-1467 TCGA-24-1470 TCGA-24-1474 TCGA-24-1546 
       72.92        45.14       105.99         3.42        22.19        64.27 
TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 
       51.91        41.39        58.09        88.50        70.62        39.88 
TCGA-24-1565 TCGA-24-1567 TCGA-24-1614 TCGA-24-1842 TCGA-24-1844 TCGA-24-1846 
       10.26        17.23        48.33         8.32         3.72         4.37 
TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 TCGA-24-1927 
       11.28         5.75         5.49         9.80        22.65        16.41 
TCGA-24-2020 TCGA-24-2027 TCGA-24-2030 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 
      151.99       109.68        53.95        64.01        44.48        57.07 
TCGA-24-2262 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2289 TCGA-24-2290 
        0.36        31.63        70.45        44.58        67.36        36.23 
TCGA-24-2297 TCGA-24-2298 TCGA-25-1313 TCGA-25-1315 TCGA-25-1319 TCGA-25-1322 
       55.86        53.26        26.93        51.06        65.00         2.99 
TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1628 TCGA-25-1632 
        2.96        18.58        18.02        15.78        20.58        56.94 
TCGA-25-1635 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2396 TCGA-25-2397 
       51.22        85.05        13.02        49.05         3.02        12.00 
TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1690 TCGA-29-1691 
        2.96        29.00        30.97        26.96        44.71        47.18 
TCGA-29-1696 TCGA-29-1697 TCGA-29-1701 TCGA-29-1703 TCGA-29-1707 TCGA-29-1711 
       33.70        31.17        16.90        59.67        41.95        34.62 
TCGA-29-1762 TCGA-29-1764 TCGA-29-1768 TCGA-29-1769 TCGA-29-1776 TCGA-29-1778 
       85.68        62.93        31.23        22.98        11.84        14.93 
TCGA-29-1781 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 
        8.35         5.36        34.62        86.17        65.00        62.47 
TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 TCGA-29-2436 TCGA-30-1718 
       45.11         4.87        42.25        11.84         9.76        51.91 
TCGA-30-1855 TCGA-30-1859 TCGA-30-1860 TCGA-30-1862 TCGA-30-1887 TCGA-30-1891 
        2.47        48.07        44.91         6.08        24.26        30.05 
TCGA-30-1892 TCGA-31-1946 TCGA-31-1951 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 
       48.79        30.18        22.45        44.09         2.17        28.73 
TCGA-36-1570 TCGA-36-1574 TCGA-36-1575 TCGA-36-1577 TCGA-36-1578 TCGA-36-2530 
       21.53        22.55         8.55        25.74        27.85        33.01 
TCGA-36-2532 TCGA-36-2534 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2551 
       29.49        29.79        25.08        23.80        21.60        16.14 
TCGA-42-2582 TCGA-42-2588 TCGA-42-2591 TCGA-57-1583 TCGA-57-1584 TCGA-57-1586 
       26.04         9.44        22.39        11.38        21.14        22.32 
TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2354 
       25.05        25.02       180.16        80.12        22.32        34.39 
TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 
       11.11         8.05        20.94        31.40        18.54        27.88 
TCGA-61-1734 TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1895 TCGA-61-1900 
       28.47        44.84        35.80         2.43         1.41         5.79 
TCGA-61-1901 TCGA-61-1903 TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 
       11.41        13.02        31.30        37.02        42.48        48.92 
TCGA-61-1917 TCGA-61-1998 TCGA-61-2008 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 
       43.43         5.52        30.61        45.96        45.40         4.80 
TCGA-61-2088 TCGA-61-2092 TCGA-61-2095 TCGA-61-2109 TCGA-61-2612 
        4.77        51.72        61.64        20.68         6.35 

  9Q LOSS MUTATED 9Q LOSS WILD-TYPE 
             0.26              0.36 
  9Q LOSS MUTATED 9Q LOSS WILD-TYPE 
           129.96            180.16 
  9Q LOSS MUTATED 9Q LOSS WILD-TYPE 
            25.89             29.49 
[1] "0.3 - 130.0 (25.9)" "0.4 - 180.2 (29.5)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" "9Q LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
  "9Q LOSS MUTATED" "9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"9Q LOSS WILD-TYPE"   "9Q LOSS MUTATED"   "9Q LOSS MUTATED" 
[1] "hr=" "1.2"
D58V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  9Q LOSS MUTATED         1   274                2
  9Q LOSS WILD-TYPE       1   274                0
D58V3, multiclass
                  clus
vv                 9Q LOSS MUTATED 9Q LOSS WILD-TYPE
  OMENTUM                        1                 1
  OVARY                        274               274
  PERITONEUM OVARY               2                 0
D58V4, continuous
D58V5, binary
                   cls
clus                  0   1
  9Q LOSS MUTATED     2 282
  9Q LOSS WILD-TYPE   1 277
[1] "tbl2"
                   cls
clus                [,1] [,2]
  9Q LOSS MUTATED      2  282
  9Q LOSS WILD-TYPE    1  277
     clus
vv    9Q LOSS MUTATED 9Q LOSS WILD-TYPE
  NO                2                 1
  YES             282               277
                   vv
clus                R0 R1 R2
  9Q LOSS MUTATED    8 11  1
  9Q LOSS WILD-TYPE  6 15  1
D58V6, multiclass
    clus
vv   9Q LOSS MUTATED 9Q LOSS WILD-TYPE
  R0               8                 6
  R1              11                15
  R2               1                 1

Clustering(59) Variable = 10P LOSS MUTATION ANALYSIS
D59V1, survival
                    sevent
clus2                  0   1
  10P LOSS MUTATED    43  47
  10P LOSS WILD-TYPE 218 239
  10P LOSS MUTATED 10P LOSS WILD-TYPE 
                90                457 
  10P LOSS MUTATED 10P LOSS WILD-TYPE 
                47                239 
$`10P LOSS MUTATED`
TCGA-04-1364 TCGA-04-1371 TCGA-04-1648 TCGA-09-0364 TCGA-09-0366 TCGA-09-0367 
       33.67        82.36        28.64        29.16        57.73        17.95 
TCGA-09-0369 TCGA-09-2043 TCGA-09-2053 TCGA-10-0935 TCGA-10-0938 TCGA-13-0724 
       35.54         6.15        39.75        35.41        19.86         2.73 
TCGA-13-0760 TCGA-13-0764 TCGA-13-0794 TCGA-13-0803 TCGA-13-0889 TCGA-13-0891 
       11.54        31.04        30.35        43.82        61.81        69.01 
TCGA-13-0893 TCGA-13-0904 TCGA-13-0921 TCGA-13-1408 TCGA-13-1489 TCGA-13-1500 
       43.36        48.33         4.64         5.92        82.88        13.97 
TCGA-13-1507 TCGA-13-2057 TCGA-13-2065 TCGA-20-1684 TCGA-23-1114 TCGA-23-1118 
        4.77        14.24         8.75        19.07        68.68        86.01 
TCGA-23-2072 TCGA-23-2078 TCGA-24-0979 TCGA-24-1104 TCGA-24-1416 TCGA-24-1425 
       24.95        87.48        41.56        63.55         6.38         5.95 
TCGA-24-1434 TCGA-24-1435 TCGA-24-1466 TCGA-24-1467 TCGA-24-1471 TCGA-24-1474 
       18.67        43.53        45.14       105.99         1.18        22.19 
TCGA-24-1557 TCGA-24-1614 TCGA-24-1844 TCGA-24-1923 TCGA-24-2019 TCGA-24-2026 
       39.88        48.33         3.72        22.65         4.87        34.82 
TCGA-24-2030 TCGA-24-2254 TCGA-24-2280 TCGA-24-2288 TCGA-24-2297 TCGA-24-2298 
       53.95        57.07        70.45         0.82        55.86        53.26 
TCGA-25-1313 TCGA-25-1323 TCGA-25-1625 TCGA-25-1632 TCGA-25-2393 TCGA-25-2399 
       26.93        12.00        18.02        56.94        38.04        19.99 
TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1707 TCGA-29-1761 TCGA-29-1769 
       31.17        68.28         0.53        41.95        17.00        22.98 
TCGA-30-1714 TCGA-30-1855 TCGA-31-1944 TCGA-31-1951 TCGA-31-1959 TCGA-36-2532 
       38.07         2.47        45.57        22.45         2.17        29.49 
TCGA-36-2534 TCGA-36-2538 TCGA-36-2542 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 
       29.79        25.08        21.60        20.98        18.31        20.52 
TCGA-42-2589 TCGA-61-1724 TCGA-61-1734 TCGA-61-1737 TCGA-61-1743 TCGA-61-1906 
        7.56        20.94        28.47        44.84        43.69        34.13 
TCGA-61-1913 TCGA-61-1914 TCGA-61-2092 TCGA-61-2094 TCGA-61-2102 TCGA-61-2113 
       48.92        56.58        51.72        71.74         6.48        22.22 

$`10P LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 
       18.51        11.87        65.49        63.06        48.76        21.57 
TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 TCGA-04-1362 TCGA-04-1365 
       63.98        65.46        49.28        32.52        44.32        76.54 
TCGA-04-1367 TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 TCGA-04-1530 
       71.47        56.55        41.59        19.99        38.37       119.08 
TCGA-04-1536 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 TCGA-04-1649 
       29.06        84.20        55.40        48.89        27.88        64.64 
TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 TCGA-04-1655 TCGA-09-0365 TCGA-09-1659 
       36.23        31.86        47.70        45.34         9.47         9.96 
TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 
       38.43        89.33        74.89        41.59        57.57        61.87 
TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 
       55.36        30.48        17.98         5.85         3.02         8.55 
TCGA-09-1675 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 
       97.55         6.12        35.15         4.50       112.37        71.11 
TCGA-09-2051 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 
       63.09        20.91        26.93        12.46        54.31        25.91 
TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 
       81.47        18.48        33.24        32.28        11.70         3.88 
TCGA-10-0936 TCGA-10-0937 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 
       35.80        15.12         6.21        24.59        44.55        39.58 
TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 
       12.39        31.07        15.19        17.79        55.17         2.47 
TCGA-13-0757 TCGA-13-0758 TCGA-13-0761 TCGA-13-0762 TCGA-13-0766 TCGA-13-0768 
       11.18        11.38        34.06        32.25        21.40         8.42 
TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 
       38.93        36.72        28.70        19.56         8.71         7.79 
TCGA-13-0800 TCGA-13-0801 TCGA-13-0802 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 
        8.12         8.28         8.19        35.28        35.28        13.61 
TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 
       68.91       107.18        91.40        74.27        66.64        70.39 
TCGA-13-0890 TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 
       67.99        57.47        56.15        57.07        19.36        47.38 
TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 
       47.84        44.94        44.84        37.08        27.68        34.06 
TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 TCGA-13-0923 TCGA-13-0924 
       29.98        21.14        14.89        13.81         6.41         6.08 
TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 TCGA-13-1409 TCGA-13-1410 
       10.88         6.61         7.36         6.05         6.84         4.70 
TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 
        4.21         5.33        54.61        87.06        61.71        29.39 
TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 TCGA-13-1491 TCGA-13-1492 
       98.04        20.68        22.39        70.82        52.44        73.55 
TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 
       38.17        49.22         4.24        54.31        37.61        38.37 
TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1509 TCGA-13-1510 
       32.84        16.57         4.21         4.41         4.14         2.56 
TCGA-13-1511 TCGA-13-1512 TCGA-13-2059 TCGA-13-2060 TCGA-13-2061 TCGA-13-2071 
        3.88         3.09        12.23         8.58        10.78         6.28 
TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 TCGA-20-1683 
       23.05        25.94        26.20        72.20        27.48        25.38 
TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 TCGA-23-1022 TCGA-23-1023 
       16.67         2.93         2.66        47.54        42.51        40.54 
TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 
       15.39        26.83        31.73        49.41         8.81        29.10 
TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 
       18.87         2.24        51.35        54.51         3.22        31.20 
TCGA-23-1116 TCGA-23-1117 TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 
        4.57        33.30       129.96         4.27         6.38        39.09 
TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 TCGA-23-2077 TCGA-23-2079 TCGA-23-2081 
       33.47        58.13         0.53       115.89        91.66        77.00 
TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 
       49.84         2.76         4.70         4.50         7.63        19.63 
TCGA-24-0970 TCGA-24-0975 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1105 
       11.64        21.80         7.66        22.32        54.08        47.41 
TCGA-24-1413 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 
        6.31         7.82         7.99         7.86         0.76         6.25 
TCGA-24-1424 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 
        6.02         5.36         4.80        17.36        28.34        19.17 
TCGA-24-1436 TCGA-24-1463 TCGA-24-1464 TCGA-24-1469 TCGA-24-1470 TCGA-24-1544 
        8.55        72.92        12.46         9.11         3.42        26.96 
TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 
       57.37        64.27        16.21        56.58        41.06        51.91 
TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1558 TCGA-24-1560 
       41.39        58.09        88.50        70.62        19.53        44.09 
TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 
       45.50        47.70        25.87        10.26        17.23        90.15 
TCGA-24-1604 TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 TCGA-24-1845 TCGA-24-1846 
       88.34        38.24         8.32         3.48         3.81         4.37 
TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1924 TCGA-24-1927 
       11.28         5.75         5.49         9.80        30.21        16.41 
TCGA-24-1928 TCGA-24-1930 TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 TCGA-24-2027 
       11.05        81.11       151.99        44.84        58.16       109.68 
TCGA-24-2029 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2260 
       14.43        18.48        28.18        64.01        44.48        36.16 
TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2281 TCGA-24-2289 
        0.79         0.36        47.54        31.63        44.58        67.36 
TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-25-1312 TCGA-25-1314 TCGA-25-1315 
       36.23        16.64        33.11         1.02        31.99        51.06 
TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 
       37.02         1.02        34.98        65.00        36.95        33.96 
TCGA-25-1322 TCGA-25-1329 TCGA-25-1623 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 
        2.99         2.96        18.58        15.78         0.36        20.58 
TCGA-25-1630 TCGA-25-1631 TCGA-25-1633 TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 
        7.86         0.30        60.59        35.54        51.22        14.93 
TCGA-25-1871 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 
       24.99        18.05        85.05        13.02        49.05         1.02 
TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 
        3.02        12.00        45.01        42.02         2.96        29.00 
TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 TCGA-29-1693 
       30.97        26.96        78.87        44.71        47.18       101.75 
TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 
       38.53         0.79        33.70        16.90        18.64        59.67 
TCGA-29-1705 TCGA-29-1710 TCGA-29-1711 TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 
       18.25        29.23        34.62        85.68        66.77        62.93 
TCGA-29-1766 TCGA-29-1768 TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 
       39.09        31.23        24.36        22.52        17.29        12.36 
TCGA-29-1776 TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 
       11.84        12.30        14.93         8.35         7.20         5.36 
TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 
       34.62        86.17        65.00        62.47        45.11         4.87 
TCGA-29-2431 TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 TCGA-30-1718 TCGA-30-1853 
       42.25        11.84        11.47         9.76        51.91        36.26 
TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 TCGA-30-1861 TCGA-30-1862 
       15.68         0.26        48.07        44.91        34.78         6.08 
TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 
       36.62         1.18        57.57        24.26        30.05        48.79 
TCGA-31-1946 TCGA-31-1950 TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-36-1568 
       30.18        18.77         6.71        42.51        44.09        28.73 
TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 
       29.06        21.53        22.85        22.55         8.55        30.05 
TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 TCGA-36-1581 TCGA-36-2529 TCGA-36-2530 
       25.74        27.85        24.23        24.69        35.05        33.01 
TCGA-36-2537 TCGA-36-2540 TCGA-36-2543 TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 
       25.91        23.80         2.24        14.17         6.05        16.14 
TCGA-36-2552 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 TCGA-42-2590 TCGA-42-2591 
       11.47        26.04        23.74         9.44         7.46        22.39 
TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 
        1.48        24.03        11.38        21.14         1.74        22.32 
TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 
       28.96        25.05        25.02       180.16        80.12        22.32 
TCGA-59-2351 TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 
      116.12         9.40        34.39         2.14         5.39        44.78 
TCGA-61-1721 TCGA-61-1722 TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 TCGA-61-1730 
       11.11         8.05        31.40        18.54        27.88         4.34 
TCGA-61-1733 TCGA-61-1736 TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1895 
       31.76        48.79        35.80         2.43        33.67         1.41 
TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1907 
        8.42         5.79        11.41        13.02         9.07        31.30 
TCGA-61-1910 TCGA-61-1911 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 
       37.02        42.48        67.73        43.43        15.75        38.17 
TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 
        1.97         5.52        14.50        17.98         3.98        30.61 
TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 
       39.85        30.64         1.18        45.96        45.40         4.80 
TCGA-61-2088 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 
        4.77        61.64        58.39        60.62        65.49        55.50 
TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 TCGA-61-2612 TCGA-61-2613 
       76.83        20.68        44.52       125.72         6.35        31.07 
TCGA-61-2614 
        8.58 

  10P LOSS MUTATED 10P LOSS WILD-TYPE 
              0.53               0.26 
  10P LOSS MUTATED 10P LOSS WILD-TYPE 
            105.99             180.16 
  10P LOSS MUTATED 10P LOSS WILD-TYPE 
             29.64              27.68 
[1] "0.5 - 106.0 (29.6)" "0.3 - 180.2 (27.7)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "10P LOSS MUTATED"   "10P LOSS MUTATED"   "10P LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "10P LOSS MUTATED"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "10P LOSS MUTATED"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "10P LOSS MUTATED"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED"   "10P LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "10P LOSS MUTATED"   "10P LOSS MUTATED"   "10P LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
  "10P LOSS MUTATED"   "10P LOSS MUTATED"   "10P LOSS MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
  "10P LOSS MUTATED"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-2614 
"10P LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "10P LOSS MUTATED"   "10P LOSS MUTATED"   "10P LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "10P LOSS MUTATED"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "10P LOSS MUTATED"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "10P LOSS MUTATED"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED"   "10P LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "10P LOSS MUTATED"   "10P LOSS MUTATED"   "10P LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
  "10P LOSS MUTATED"   "10P LOSS MUTATED"   "10P LOSS MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
  "10P LOSS MUTATED"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-2614 
"10P LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "10P LOSS MUTATED"   "10P LOSS MUTATED"   "10P LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "10P LOSS MUTATED"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "10P LOSS MUTATED"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "10P LOSS MUTATED"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED"   "10P LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "10P LOSS MUTATED"   "10P LOSS MUTATED"   "10P LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
  "10P LOSS MUTATED"   "10P LOSS MUTATED"   "10P LOSS MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE"   "10P LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
  "10P LOSS MUTATED"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"10P LOSS WILD-TYPE"   "10P LOSS MUTATED" "10P LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "10P LOSS MUTATED" "10P LOSS WILD-TYPE" "10P LOSS WILD-TYPE" 
        TCGA-61-2614 
"10P LOSS WILD-TYPE" 
[1] "hr=" "1"  
D59V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  10P LOSS MUTATED         0    92                0
  10P LOSS WILD-TYPE       2   456                2
D59V3, multiclass
                  clus
vv                 10P LOSS MUTATED 10P LOSS WILD-TYPE
  OMENTUM                         0                  2
  OVARY                          92                456
  PERITONEUM OVARY                0                  2
D59V4, continuous
D59V5, binary
                    cls
clus                   0   1
  10P LOSS MUTATED     1  94
  10P LOSS WILD-TYPE   2 465
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  10P LOSS MUTATED      1   94
  10P LOSS WILD-TYPE    2  465
     clus
vv    10P LOSS MUTATED 10P LOSS WILD-TYPE
  NO                 1                  2
  YES               94                465
                    vv
clus                 R0 R1 R2
  10P LOSS MUTATED    4  4  0
  10P LOSS WILD-TYPE 10 22  2
D59V6, multiclass
    clus
vv   10P LOSS MUTATED 10P LOSS WILD-TYPE
  R0                4                 10
  R1                4                 22
  R2                0                  2

Clustering(60) Variable = 10Q LOSS MUTATION ANALYSIS
D60V1, survival
                    sevent
clus2                  0   1
  10Q LOSS MUTATED    59  59
  10Q LOSS WILD-TYPE 202 227
  10Q LOSS MUTATED 10Q LOSS WILD-TYPE 
               118                429 
  10Q LOSS MUTATED 10Q LOSS WILD-TYPE 
                59                227 
$`10Q LOSS MUTATED`
TCGA-04-1343 TCGA-04-1364 TCGA-04-1648 TCGA-04-1649 TCGA-09-0364 TCGA-09-0366 
       11.87        33.67        28.64        64.64        29.16        57.73 
TCGA-09-0367 TCGA-09-0369 TCGA-09-1667 TCGA-09-1673 TCGA-09-2043 TCGA-09-2053 
       17.95        35.54        61.87         3.02         6.15        39.75 
TCGA-10-0935 TCGA-10-0938 TCGA-13-0724 TCGA-13-0751 TCGA-13-0760 TCGA-13-0764 
       35.41        19.86         2.73        55.17        11.54        31.04 
TCGA-13-0794 TCGA-13-0800 TCGA-13-0803 TCGA-13-0807 TCGA-13-0889 TCGA-13-0891 
       30.35         8.12        43.82        13.61        61.81        69.01 
TCGA-13-0893 TCGA-13-0899 TCGA-13-0904 TCGA-13-0911 TCGA-13-0916 TCGA-13-0921 
       43.36        56.15        48.33        27.68        21.14         4.64 
TCGA-13-1407 TCGA-13-1408 TCGA-13-1489 TCGA-13-1492 TCGA-13-1496 TCGA-13-1497 
        6.05         5.92        82.88        73.55         4.24        54.31 
TCGA-13-1507 TCGA-13-2057 TCGA-13-2065 TCGA-20-1684 TCGA-20-1686 TCGA-23-1114 
        4.77        14.24         8.75        19.07         2.93        68.68 
TCGA-23-1118 TCGA-23-2072 TCGA-24-0979 TCGA-24-1104 TCGA-24-1416 TCGA-24-1418 
       86.01        24.95        41.56        63.55         6.38         7.99 
TCGA-24-1430 TCGA-24-1434 TCGA-24-1435 TCGA-24-1466 TCGA-24-1467 TCGA-24-1471 
       28.34        18.67        43.53        45.14       105.99         1.18 
TCGA-24-1474 TCGA-24-1557 TCGA-24-1614 TCGA-24-1844 TCGA-24-1850 TCGA-24-1928 
       22.19        39.88        48.33         3.72         5.49        11.05 
TCGA-24-2026 TCGA-24-2030 TCGA-24-2254 TCGA-24-2280 TCGA-24-2288 TCGA-24-2297 
       34.82        53.95        57.07        70.45         0.82        55.86 
TCGA-24-2298 TCGA-25-1313 TCGA-25-1320 TCGA-25-1323 TCGA-25-1632 TCGA-25-1635 
       53.26        26.93        36.95        12.00        56.94        51.22 
TCGA-25-2399 TCGA-25-2400 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 
       19.99        42.02        31.17        68.28         0.53        16.90 
TCGA-29-1703 TCGA-29-1761 TCGA-29-1766 TCGA-29-1769 TCGA-29-1770 TCGA-29-1775 
       59.67        17.00        39.09        22.98        24.36        12.36 
TCGA-29-1778 TCGA-30-1714 TCGA-30-1855 TCGA-30-1856 TCGA-30-1859 TCGA-31-1944 
       14.93        38.07         2.47        15.68        48.07        45.57 
TCGA-31-1951 TCGA-31-1953 TCGA-31-1959 TCGA-36-1577 TCGA-36-1581 TCGA-36-2532 
       22.45         6.71         2.17        25.74        24.69        29.49 
TCGA-36-2534 TCGA-36-2538 TCGA-36-2542 TCGA-36-2543 TCGA-36-2545 TCGA-36-2547 
       29.79        25.08        21.60         2.24        18.31        20.52 
TCGA-42-2589 TCGA-61-1724 TCGA-61-1728 TCGA-61-1734 TCGA-61-1737 TCGA-61-1743 
        7.56        20.94        27.88        28.47        44.84        43.69 
TCGA-61-1906 TCGA-61-1913 TCGA-61-1914 TCGA-61-1918 TCGA-61-2012 TCGA-61-2088 
       34.13        48.92        56.58        15.75        30.64         4.77 
TCGA-61-2092 TCGA-61-2094 TCGA-61-2102 TCGA-61-2113 
       51.72        71.74         6.48        22.22 

$`10Q LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 
       18.51        65.49        63.06        48.76        21.57        63.98 
TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 TCGA-04-1362 TCGA-04-1365 TCGA-04-1367 
       65.46        49.28        32.52        44.32        76.54        71.47 
TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 TCGA-04-1530 
       82.36        56.55        41.59        19.99        38.37       119.08 
TCGA-04-1536 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 TCGA-04-1651 
       29.06        84.20        55.40        48.89        27.88        36.23 
TCGA-04-1652 TCGA-04-1654 TCGA-04-1655 TCGA-09-0365 TCGA-09-1659 TCGA-09-1661 
       31.86        47.70        45.34         9.47         9.96        38.43 
TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1668 TCGA-09-1669 
       89.33        74.89        41.59        57.57        55.36        30.48 
TCGA-09-1670 TCGA-09-1672 TCGA-09-1674 TCGA-09-1675 TCGA-09-2044 TCGA-09-2045 
       17.98         5.85         8.55        97.55         6.12        35.15 
TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 TCGA-09-2054 TCGA-09-2055 
        4.50       112.37        71.11        63.09        20.91        26.93 
TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 
       12.46        54.31        25.91        81.47        18.48        33.24 
TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0936 TCGA-10-0937 TCGA-13-0714 
       32.28        11.70         3.88        35.80        15.12         6.21 
TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 
       24.59        44.55        39.58        12.39        31.07        15.19 
TCGA-13-0730 TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 TCGA-13-0761 TCGA-13-0762 
       17.79         2.47        11.18        11.38        34.06        32.25 
TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0795 
       21.40         8.42        38.93        36.72        28.70        19.56 
TCGA-13-0797 TCGA-13-0799 TCGA-13-0801 TCGA-13-0802 TCGA-13-0804 TCGA-13-0805 
        8.71         7.79         8.28         8.19        35.28        35.28 
TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 
       68.91       107.18        91.40        74.27        66.64        70.39 
TCGA-13-0890 TCGA-13-0897 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0905 
       67.99        57.47        57.07        19.36        47.38        47.84 
TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0912 TCGA-13-0913 TCGA-13-0919 
       44.94        44.84        37.08        34.06        29.98        14.89 
TCGA-13-0920 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 
       13.81         6.41         6.08        10.88         6.61         7.36 
TCGA-13-1409 TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 
        6.84         4.70         4.21         5.33        54.61        87.06 
TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 
       61.71        29.39        98.04        20.68        22.39        70.82 
TCGA-13-1491 TCGA-13-1494 TCGA-13-1495 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 
       52.44        38.17        49.22        37.61        38.37        13.97 
TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1509 TCGA-13-1510 
       32.84        16.57         4.21         4.41         4.14         2.56 
TCGA-13-1511 TCGA-13-1512 TCGA-13-2059 TCGA-13-2060 TCGA-13-2061 TCGA-13-2071 
        3.88         3.09        12.23         8.58        10.78         6.28 
TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 TCGA-20-1683 
       23.05        25.94        26.20        72.20        27.48        25.38 
TCGA-20-1685 TCGA-20-1687 TCGA-23-1021 TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 
       16.67         2.66        47.54        42.51        40.54        15.39 
TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 
       26.83        31.73        49.41         8.81        29.10        18.87 
TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 TCGA-23-1116 
        2.24        51.35        54.51         3.22        31.20         4.57 
TCGA-23-1117 TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 
       33.30       129.96         4.27         6.38        39.09        33.47 
TCGA-23-1124 TCGA-23-1809 TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 
       58.13         0.53       115.89        87.48        91.66        77.00 
TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 
       49.84         2.76         4.70         4.50         7.63        19.63 
TCGA-24-0970 TCGA-24-0975 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1105 
       11.64        21.80         7.66        22.32        54.08        47.41 
TCGA-24-1413 TCGA-24-1417 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 
        6.31         7.82         7.86         0.76         6.25         6.02 
TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1431 TCGA-24-1436 
        5.95         5.36         4.80        17.36        19.17         8.55 
TCGA-24-1463 TCGA-24-1464 TCGA-24-1469 TCGA-24-1470 TCGA-24-1544 TCGA-24-1545 
       72.92        12.46         9.11         3.42        26.96        57.37 
TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 
       64.27        16.21        56.58        41.06        51.91        41.39 
TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 
       58.09        88.50        70.62        19.53        44.09        45.50 
TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 
       47.70        25.87        10.26        17.23        90.15        88.34 
TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 
       38.24         8.32         3.48         3.81         4.37        11.28 
TCGA-24-1849 TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-1930 
        5.75         9.80        22.65        30.21        16.41        81.11 
TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 TCGA-24-2027 TCGA-24-2029 
        4.87       151.99        44.84        58.16       109.68        14.43 
TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2260 TCGA-24-2261 
       18.48        28.18        64.01        44.48        36.16         0.79 
TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2281 TCGA-24-2289 TCGA-24-2290 
        0.36        47.54        31.63        44.58        67.36        36.23 
TCGA-24-2293 TCGA-24-2295 TCGA-25-1312 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 
       16.64        33.11         1.02        31.99        51.06        37.02 
TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 TCGA-25-1321 TCGA-25-1322 TCGA-25-1329 
        1.02        34.98        65.00        33.96         2.99         2.96 
TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 TCGA-25-1630 
       18.58        18.02        15.78         0.36        20.58         7.86 
TCGA-25-1631 TCGA-25-1633 TCGA-25-1634 TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 
        0.30        60.59        35.54        14.93        24.99        18.05 
TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 TCGA-25-2396 
       85.05        13.02        49.05         1.02        38.04         3.02 
TCGA-25-2397 TCGA-25-2398 TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 
       12.00        45.01         2.96        29.00        30.97        26.96 
TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 
       78.87        44.71        47.18       101.75        38.53         0.79 
TCGA-29-1696 TCGA-29-1702 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 
       33.70        18.64        18.25        41.95        29.23        34.62 
TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 TCGA-29-1768 TCGA-29-1771 TCGA-29-1774 
       85.68        66.77        62.93        31.23        22.52        17.29 
TCGA-29-1776 TCGA-29-1777 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 
       11.84        12.30         8.35         7.20         5.36        34.62 
TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 
       86.17        65.00        62.47        45.11         4.87        42.25 
TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 TCGA-30-1718 TCGA-30-1853 TCGA-30-1857 
       11.84        11.47         9.76        51.91        36.26         0.26 
TCGA-30-1860 TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 
       44.91        34.78         6.08        36.62         1.18        57.57 
TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 TCGA-31-1946 TCGA-31-1950 TCGA-31-1955 
       24.26        30.05        48.79        30.18        18.77        42.51 
TCGA-31-1956 TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 
       44.09        28.73        29.06        21.53        22.85        22.55 
TCGA-36-1575 TCGA-36-1576 TCGA-36-1578 TCGA-36-1580 TCGA-36-2529 TCGA-36-2530 
        8.55        30.05        27.85        24.23        35.05        33.01 
TCGA-36-2537 TCGA-36-2540 TCGA-36-2544 TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 
       25.91        23.80        20.98        14.17         6.05        16.14 
TCGA-36-2552 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 TCGA-42-2590 TCGA-42-2591 
       11.47        26.04        23.74         9.44         7.46        22.39 
TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 
        1.48        24.03        11.38        21.14         1.74        22.32 
TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 
       28.96        25.05        25.02       180.16        80.12        22.32 
TCGA-59-2351 TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 
      116.12         9.40        34.39         2.14         5.39        44.78 
TCGA-61-1721 TCGA-61-1722 TCGA-61-1725 TCGA-61-1727 TCGA-61-1730 TCGA-61-1733 
       11.11         8.05        31.40        18.54         4.34        31.76 
TCGA-61-1736 TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1895 TCGA-61-1899 
       48.79        35.80         2.43        33.67         1.41         8.42 
TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1907 TCGA-61-1910 
        5.79        11.41        13.02         9.07        31.30        37.02 
TCGA-61-1911 TCGA-61-1915 TCGA-61-1917 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 
       42.48        67.73        43.43        38.17         1.97         5.52 
TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 TCGA-61-2009 TCGA-61-2016 
       14.50        17.98         3.98        30.61        39.85         1.18 
TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 
       45.96        45.40         4.80        61.64        58.39        60.62 
TCGA-61-2098 TCGA-61-2101 TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 
       65.49        55.50        76.83        20.68        44.52       125.72 
TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
        6.35        31.07         8.58 

  10Q LOSS MUTATED 10Q LOSS WILD-TYPE 
              0.53               0.26 
  10Q LOSS MUTATED 10Q LOSS WILD-TYPE 
            105.99             180.16 
  10Q LOSS MUTATED 10Q LOSS WILD-TYPE 
             28.11              28.18 
[1] "0.5 - 106.0 (28.1)" "0.3 - 180.2 (28.2)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "10Q LOSS MUTATED"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "10Q LOSS MUTATED"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "10Q LOSS MUTATED"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "10Q LOSS MUTATED"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "10Q LOSS MUTATED"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "10Q LOSS MUTATED"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
  "10Q LOSS MUTATED"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-2614 
"10Q LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "10Q LOSS MUTATED"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "10Q LOSS MUTATED"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "10Q LOSS MUTATED"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "10Q LOSS MUTATED"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "10Q LOSS MUTATED"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "10Q LOSS MUTATED"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
  "10Q LOSS MUTATED"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-2614 
"10Q LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "10Q LOSS MUTATED"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "10Q LOSS MUTATED"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "10Q LOSS MUTATED"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "10Q LOSS MUTATED"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "10Q LOSS MUTATED"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "10Q LOSS MUTATED"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED"   "10Q LOSS MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
  "10Q LOSS MUTATED"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"10Q LOSS WILD-TYPE"   "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "10Q LOSS MUTATED" "10Q LOSS WILD-TYPE" "10Q LOSS WILD-TYPE" 
        TCGA-61-2614 
"10Q LOSS WILD-TYPE" 
[1] "hr=" "1"  
D60V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  10Q LOSS MUTATED         0   118                1
  10Q LOSS WILD-TYPE       2   430                1
D60V3, multiclass
                  clus
vv                 10Q LOSS MUTATED 10Q LOSS WILD-TYPE
  OMENTUM                         0                  2
  OVARY                         118                430
  PERITONEUM OVARY                1                  1
D60V4, continuous
D60V5, binary
                    cls
clus                   0   1
  10Q LOSS MUTATED     3 120
  10Q LOSS WILD-TYPE   0 439
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  10Q LOSS MUTATED      3  120
  10Q LOSS WILD-TYPE    0  439
     clus
vv    10Q LOSS MUTATED 10Q LOSS WILD-TYPE
  NO                 3                  0
  YES              120                439
                    vv
clus                 R0 R1 R2
  10Q LOSS MUTATED    4  6  0
  10Q LOSS WILD-TYPE 10 20  2
D60V6, multiclass
    clus
vv   10Q LOSS MUTATED 10Q LOSS WILD-TYPE
  R0                4                 10
  R1                6                 20
  R2                0                  2

Clustering(61) Variable = 11P LOSS MUTATION ANALYSIS
D61V1, survival
                    sevent
clus2                  0   1
  11P LOSS MUTATED    82 101
  11P LOSS WILD-TYPE 179 185
  11P LOSS MUTATED 11P LOSS WILD-TYPE 
               183                364 
  11P LOSS MUTATED 11P LOSS WILD-TYPE 
               101                185 
$`11P LOSS MUTATED`
TCGA-04-1331 TCGA-04-1338 TCGA-04-1347 TCGA-04-1351 TCGA-04-1356 TCGA-04-1367 
       40.24        46.62        63.06        65.46        49.28        71.47 
TCGA-04-1517 TCGA-04-1536 TCGA-04-1542 TCGA-04-1644 TCGA-04-1646 TCGA-04-1648 
       19.99        29.06        84.20        48.89        27.88        28.64 
TCGA-04-1649 TCGA-04-1655 TCGA-09-0366 TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 
       64.64        45.34        57.73        35.54         9.96        38.43 
TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 TCGA-09-1670 TCGA-09-1674 TCGA-09-2053 
       57.57        61.87        55.36        17.98         8.55        39.75 
TCGA-10-0926 TCGA-10-0928 TCGA-10-0930 TCGA-10-0937 TCGA-10-0938 TCGA-13-0723 
       25.91        18.48        33.24        15.12        19.86        39.58 
TCGA-13-0751 TCGA-13-0758 TCGA-13-0760 TCGA-13-0762 TCGA-13-0768 TCGA-13-0802 
       55.17        11.38        11.54        32.25         8.42         8.19 
TCGA-13-0804 TCGA-13-0886 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0904 
       35.28        74.27        56.15        57.07        19.36        48.33 
TCGA-13-0906 TCGA-13-0908 TCGA-13-0913 TCGA-13-0920 TCGA-13-0921 TCGA-13-1404 
       44.94        44.84        29.98        13.81         4.64         6.61 
TCGA-13-1409 TCGA-13-1411 TCGA-13-1477 TCGA-13-1482 TCGA-13-1483 TCGA-13-1487 
        6.84         4.21        54.61        61.71        29.39        22.39 
TCGA-13-1489 TCGA-13-1494 TCGA-13-1495 TCGA-13-1500 TCGA-13-1505 TCGA-13-1507 
       82.88        38.17        49.22        13.97         4.21         4.77 
TCGA-13-1512 TCGA-13-2060 TCGA-13-2065 TCGA-20-0990 TCGA-20-0991 TCGA-20-1683 
        3.09         8.58         8.75        25.94        26.20        25.38 
TCGA-20-1686 TCGA-20-1687 TCGA-23-1022 TCGA-23-1027 TCGA-23-1031 TCGA-23-1113 
        2.93         2.66        42.51        31.73        18.87        31.20 
TCGA-23-1114 TCGA-23-1118 TCGA-23-1122 TCGA-23-2077 TCGA-23-2643 TCGA-24-0968 
       68.68        86.01        39.09       115.89         4.70        19.63 
TCGA-24-0970 TCGA-24-1105 TCGA-24-1418 TCGA-24-1427 TCGA-24-1428 TCGA-24-1463 
       11.64        47.41         7.99         4.80        17.36        72.92 
TCGA-24-1466 TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1549 TCGA-24-1562 
       45.14        22.19        26.96        57.37        56.58        45.50 
TCGA-24-1563 TCGA-24-1567 TCGA-24-1614 TCGA-24-1842 TCGA-24-1846 TCGA-24-1920 
       47.70        17.23        48.33         8.32         4.37         9.80 
TCGA-24-1923 TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 TCGA-24-2026 TCGA-24-2027 
       22.65        81.11         4.87       151.99        34.82       109.68 
TCGA-24-2029 TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 TCGA-24-2267 TCGA-24-2280 
       14.43        57.07        36.16         0.79        47.54        70.45 
TCGA-24-2293 TCGA-24-2295 TCGA-24-2298 TCGA-25-1313 TCGA-25-1318 TCGA-25-1319 
       16.64        33.11        53.26        26.93        34.98        65.00 
TCGA-25-1323 TCGA-25-1329 TCGA-25-1628 TCGA-25-1630 TCGA-25-1631 TCGA-25-1634 
       12.00         2.96        20.58         7.86         0.30        35.54 
TCGA-25-1870 TCGA-25-1871 TCGA-25-2392 TCGA-25-2393 TCGA-29-1688 TCGA-29-1695 
       14.93        24.99         1.02        38.04        78.87         0.79 
TCGA-29-1696 TCGA-29-1697 TCGA-29-1702 TCGA-29-1703 TCGA-29-1711 TCGA-29-1761 
       33.70        31.17        18.64        59.67        34.62        17.00 
TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 TCGA-29-1769 TCGA-29-1770 TCGA-29-1777 
       85.68        66.77        62.93        22.98        24.36        12.30 
TCGA-29-2414 TCGA-29-2428 TCGA-29-2434 TCGA-30-1853 TCGA-30-1861 TCGA-30-1866 
       86.17        45.11        11.47        36.26        34.78        36.62 
TCGA-30-1887 TCGA-31-1950 TCGA-31-1953 TCGA-36-1569 TCGA-36-1571 TCGA-36-1577 
       24.26        18.77         6.71        29.06        22.85        25.74 
TCGA-36-1581 TCGA-36-2529 TCGA-36-2538 TCGA-36-2543 TCGA-36-2549 TCGA-36-2552 
       24.69        35.05        25.08         2.24         6.05        11.47 
TCGA-42-2589 TCGA-57-1582 TCGA-57-1993 TCGA-59-2352 TCGA-59-2372 TCGA-61-1722 
        7.56        24.03        25.05         9.40        44.78         8.05 
TCGA-61-1724 TCGA-61-1725 TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 TCGA-61-1738 
       20.94        31.40        27.88         4.34        31.76        35.80 
TCGA-61-1741 TCGA-61-1904 TCGA-61-1906 TCGA-61-1910 TCGA-61-1917 TCGA-61-1919 
       33.67         9.07        34.13        37.02        43.43        38.17 
TCGA-61-2002 TCGA-61-2018 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2102 
       17.98        45.40         4.77        51.72        71.74         6.48 
TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 
      125.72        22.22         6.35 

$`11P LOSS WILD-TYPE`
TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1342 TCGA-04-1343 
       41.00         1.81        49.15         2.01        18.51        11.87 
TCGA-04-1346 TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 TCGA-04-1361 TCGA-04-1362 
       65.49        48.76        21.57        63.98        32.52        44.32 
TCGA-04-1364 TCGA-04-1365 TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 TCGA-04-1525 
       33.67        76.54        82.36        56.55        41.59        38.37 
TCGA-04-1530 TCGA-04-1638 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 TCGA-09-0364 
      119.08        55.40        36.23        31.86        47.70        29.16 
TCGA-09-0365 TCGA-09-0367 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1669 
        9.47        17.95        89.33        74.89        41.59        30.48 
TCGA-09-1672 TCGA-09-1673 TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 
        5.85         3.02        97.55         6.15         6.12        35.15 
TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 TCGA-09-2054 TCGA-09-2055 
        4.50       112.37        71.11        63.09        20.91        26.93 
TCGA-09-2056 TCGA-10-0925 TCGA-10-0927 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 
       12.46        54.31        81.47        32.28        11.70         3.88 
TCGA-10-0935 TCGA-10-0936 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0724 
       35.41        35.80         6.21        24.59        44.55         2.73 
TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0755 TCGA-13-0757 
       12.39        31.07        15.19        17.79         2.47        11.18 
TCGA-13-0761 TCGA-13-0764 TCGA-13-0766 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 
       34.06        31.04        21.40        38.93        36.72        28.70 
TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 
       30.35        19.56         8.71         7.79         8.12         8.28 
TCGA-13-0803 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 
       43.82        35.28        13.61        68.91       107.18        91.40 
TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 
       66.64        70.39        61.81        67.99        69.01        43.36 
TCGA-13-0897 TCGA-13-0903 TCGA-13-0905 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 
       57.47        47.38        47.84        37.08        27.68        34.06 
TCGA-13-0916 TCGA-13-0919 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1405 
       21.14        14.89         6.41         6.08        10.88         7.36 
TCGA-13-1407 TCGA-13-1408 TCGA-13-1410 TCGA-13-1412 TCGA-13-1481 TCGA-13-1484 
        6.05         5.92         4.70         5.33        87.06        98.04 
TCGA-13-1485 TCGA-13-1488 TCGA-13-1491 TCGA-13-1492 TCGA-13-1496 TCGA-13-1497 
       20.68        70.82        52.44        73.55         4.24        54.31 
TCGA-13-1498 TCGA-13-1499 TCGA-13-1501 TCGA-13-1504 TCGA-13-1506 TCGA-13-1509 
       37.61        38.37        32.84        16.57         4.41         4.14 
TCGA-13-1510 TCGA-13-1511 TCGA-13-2057 TCGA-13-2059 TCGA-13-2061 TCGA-13-2071 
        2.56         3.88        14.24        12.23        10.78         6.28 
TCGA-20-0987 TCGA-20-0996 TCGA-20-1682 TCGA-20-1684 TCGA-20-1685 TCGA-23-1021 
       23.05        72.20        27.48        19.07        16.67        47.54 
TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 
       40.54        15.39        26.83        49.41         8.81        29.10 
TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 TCGA-23-1116 TCGA-23-1117 
        2.24        51.35        54.51         3.22         4.57        33.30 
TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 
      129.96         4.27         6.38        33.47        58.13         0.53 
TCGA-23-2072 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 
       24.95        87.48        91.66        77.00        49.84         2.76 
TCGA-23-2645 TCGA-24-0966 TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 
        4.50         7.63        21.80        41.56         7.66        22.32 
TCGA-24-1103 TCGA-24-1104 TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 TCGA-24-1419 
       54.08        63.55         6.31         6.38         7.82         7.86 
TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 TCGA-24-1426 TCGA-24-1430 
        0.76         6.25         6.02         5.95         5.36        28.34 
TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 TCGA-24-1464 TCGA-24-1467 
       19.17        18.67        43.53         8.55        12.46       105.99 
TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 TCGA-24-1546 TCGA-24-1548 TCGA-24-1550 
        9.11         3.42         1.18        64.27        16.21        41.06 
TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 
       51.91        41.39        58.09        88.50        70.62        39.88 
TCGA-24-1558 TCGA-24-1560 TCGA-24-1564 TCGA-24-1565 TCGA-24-1603 TCGA-24-1604 
       19.53        44.09        25.87        10.26        90.15        88.34 
TCGA-24-1616 TCGA-24-1843 TCGA-24-1844 TCGA-24-1845 TCGA-24-1847 TCGA-24-1849 
       38.24         3.48         3.72         3.81        11.28         5.75 
TCGA-24-1850 TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 TCGA-24-2023 TCGA-24-2024 
        5.49        30.21        16.41        11.05        44.84        58.16 
TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2262 
       53.95        18.48        28.18        64.01        44.48         0.36 
TCGA-24-2271 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2297 
       31.63        44.58         0.82        67.36        36.23        55.86 
TCGA-25-1312 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 TCGA-25-1320 
        1.02        31.99        51.06        37.02         1.02        36.95 
TCGA-25-1321 TCGA-25-1322 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 
       33.96         2.99        18.58        18.02        15.78         0.36 
TCGA-25-1632 TCGA-25-1633 TCGA-25-1635 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 
       56.94        60.59        51.22        18.05        85.05        13.02 
TCGA-25-2391 TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 
       49.05         3.02        12.00        45.01        19.99        42.02 
TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1690 TCGA-29-1691 
        2.96        29.00        30.97        26.96        44.71        47.18 
TCGA-29-1693 TCGA-29-1694 TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 TCGA-29-1705 
      101.75        38.53        68.28         0.53        16.90        18.25 
TCGA-29-1707 TCGA-29-1710 TCGA-29-1766 TCGA-29-1768 TCGA-29-1771 TCGA-29-1774 
       41.95        29.23        39.09        31.23        22.52        17.29 
TCGA-29-1775 TCGA-29-1776 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 
       12.36        11.84        14.93         8.35         7.20         5.36 
TCGA-29-1785 TCGA-29-2425 TCGA-29-2427 TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 
       34.62        65.00        62.47         4.87        42.25        11.84 
TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 
        9.76        38.07        51.91         2.47        15.68         0.26 
TCGA-30-1859 TCGA-30-1860 TCGA-30-1862 TCGA-30-1867 TCGA-30-1880 TCGA-30-1891 
       48.07        44.91         6.08         1.18        57.57        30.05 
TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1951 TCGA-31-1955 TCGA-31-1956 
       48.79        45.57        30.18        22.45        42.51        44.09 
TCGA-31-1959 TCGA-36-1568 TCGA-36-1570 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 
        2.17        28.73        21.53        22.55         8.55        30.05 
TCGA-36-1578 TCGA-36-1580 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 
       27.85        24.23        33.01        29.49        29.79        25.91 
TCGA-36-2540 TCGA-36-2542 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 TCGA-36-2548 
       23.80        21.60        20.98        18.31        20.52        14.17 
TCGA-36-2551 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 TCGA-42-2590 TCGA-42-2591 
       16.14        26.04        23.74         9.44         7.46        22.39 
TCGA-42-2593 TCGA-57-1583 TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 
        1.48        11.38        21.14         1.74        22.32        28.96 
TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2354 
       25.02       180.16        80.12        22.32       116.12        34.39 
TCGA-59-2355 TCGA-59-2363 TCGA-61-1721 TCGA-61-1727 TCGA-61-1734 TCGA-61-1736 
        2.14         5.39        11.11        18.54        28.47        48.79 
TCGA-61-1737 TCGA-61-1740 TCGA-61-1743 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 
       44.84         2.43        43.69         1.41         8.42         5.79 
TCGA-61-1901 TCGA-61-1903 TCGA-61-1907 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 
       11.41        13.02        31.30        42.48        48.92        56.58 
TCGA-61-1915 TCGA-61-1918 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2003 
       67.73        15.75         1.97         5.52        14.50         3.98 
TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2087 
       30.61        39.85        30.64         1.18        45.96         4.80 
TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2104 
       61.64        58.39        60.62        65.49        55.50        76.83 
TCGA-61-2109 TCGA-61-2110 TCGA-61-2613 TCGA-61-2614 
       20.68        44.52        31.07         8.58 

  11P LOSS MUTATED 11P LOSS WILD-TYPE 
              0.30               0.26 
  11P LOSS MUTATED 11P LOSS WILD-TYPE 
            151.99             180.16 
  11P LOSS MUTATED 11P LOSS WILD-TYPE 
             29.06              27.58 
[1] "0.3 - 152.0 (29.1)" "0.3 - 180.2 (27.6)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "11P LOSS MUTATED"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "11P LOSS MUTATED"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "11P LOSS MUTATED"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "11P LOSS MUTATED"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "11P LOSS MUTATED"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-61-2614 
"11P LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "11P LOSS MUTATED"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "11P LOSS MUTATED"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "11P LOSS MUTATED"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "11P LOSS MUTATED"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "11P LOSS MUTATED"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-61-2614 
"11P LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "11P LOSS MUTATED"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "11P LOSS MUTATED"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "11P LOSS MUTATED"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "11P LOSS MUTATED"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "11P LOSS MUTATED"   "11P LOSS MUTATED"   "11P LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
  "11P LOSS MUTATED" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"11P LOSS WILD-TYPE"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"11P LOSS WILD-TYPE" "11P LOSS WILD-TYPE"   "11P LOSS MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "11P LOSS MUTATED"   "11P LOSS MUTATED" "11P LOSS WILD-TYPE" 
        TCGA-61-2614 
"11P LOSS WILD-TYPE" 
[1] "hr=" "1"  
D61V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  11P LOSS MUTATED         1   184                1
  11P LOSS WILD-TYPE       1   364                1
D61V3, multiclass
                  clus
vv                 11P LOSS MUTATED 11P LOSS WILD-TYPE
  OMENTUM                         1                  1
  OVARY                         184                364
  PERITONEUM OVARY                1                  1
D61V4, continuous
D61V5, binary
                    cls
clus                   0   1
  11P LOSS MUTATED     1 190
  11P LOSS WILD-TYPE   2 369
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  11P LOSS MUTATED      1  190
  11P LOSS WILD-TYPE    2  369
     clus
vv    11P LOSS MUTATED 11P LOSS WILD-TYPE
  NO                 1                  2
  YES              190                369
                    vv
clus                 R0 R1 R2
  11P LOSS MUTATED    6  7  0
  11P LOSS WILD-TYPE  8 19  2
D61V6, multiclass
    clus
vv   11P LOSS MUTATED 11P LOSS WILD-TYPE
  R0                6                  8
  R1                7                 19
  R2                0                  2

Clustering(62) Variable = 11Q LOSS MUTATION ANALYSIS
D62V1, survival
                    sevent
clus2                  0   1
  11Q LOSS MUTATED    66  80
  11Q LOSS WILD-TYPE 195 206
  11Q LOSS MUTATED 11Q LOSS WILD-TYPE 
               146                401 
  11Q LOSS MUTATED 11Q LOSS WILD-TYPE 
                80                206 
$`11Q LOSS MUTATED`
TCGA-04-1331 TCGA-04-1338 TCGA-04-1356 TCGA-04-1367 TCGA-04-1517 TCGA-04-1536 
       40.24        46.62        49.28        71.47        19.99        29.06 
TCGA-04-1648 TCGA-04-1649 TCGA-04-1655 TCGA-09-0366 TCGA-09-0369 TCGA-09-1666 
       28.64        64.64        45.34        57.73        35.54        57.57 
TCGA-09-1670 TCGA-09-2051 TCGA-09-2053 TCGA-10-0926 TCGA-10-0928 TCGA-10-0930 
       17.98        63.09        39.75        25.91        18.48        33.24 
TCGA-10-0937 TCGA-10-0938 TCGA-13-0723 TCGA-13-0724 TCGA-13-0730 TCGA-13-0751 
       15.12        19.86        39.58         2.73        17.79        55.17 
TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 TCGA-13-0762 TCGA-13-0768 TCGA-13-0795 
       11.18        11.38        11.54        32.25         8.42        19.56 
TCGA-13-0804 TCGA-13-0888 TCGA-13-0899 TCGA-13-0900 TCGA-13-0904 TCGA-13-0906 
       35.28        70.39        56.15        57.07        48.33        44.94 
TCGA-13-0908 TCGA-13-0913 TCGA-13-0920 TCGA-13-0921 TCGA-13-1404 TCGA-13-1409 
       44.84        29.98        13.81         4.64         6.61         6.84 
TCGA-13-1411 TCGA-13-1477 TCGA-13-1482 TCGA-13-1483 TCGA-13-1489 TCGA-13-1494 
        4.21        54.61        61.71        29.39        82.88        38.17 
TCGA-13-1495 TCGA-13-1501 TCGA-13-1505 TCGA-13-1512 TCGA-13-2060 TCGA-13-2065 
       49.22        32.84         4.21         3.09         8.58         8.75 
TCGA-20-0991 TCGA-20-1683 TCGA-20-1686 TCGA-23-1113 TCGA-23-1114 TCGA-23-1118 
       26.20        25.38         2.93        31.20        68.68        86.01 
TCGA-23-1122 TCGA-23-2077 TCGA-24-0968 TCGA-24-0970 TCGA-24-0982 TCGA-24-1105 
       39.09       115.89        19.63        11.64        22.32        47.41 
TCGA-24-1463 TCGA-24-1466 TCGA-24-1544 TCGA-24-1562 TCGA-24-1567 TCGA-24-1614 
       72.92        45.14        26.96        45.50        17.23        48.33 
TCGA-24-1842 TCGA-24-1920 TCGA-24-1923 TCGA-24-2019 TCGA-24-2020 TCGA-24-2026 
        8.32         9.80        22.65         4.87       151.99        34.82 
TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 TCGA-24-2280 TCGA-24-2293 TCGA-24-2295 
       57.07        36.16         0.79        70.45        16.64        33.11 
TCGA-24-2298 TCGA-25-1313 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 
       53.26        26.93        34.98        65.00        36.95        33.96 
TCGA-25-1329 TCGA-25-1628 TCGA-25-1870 TCGA-25-1871 TCGA-25-2392 TCGA-25-2393 
        2.96        20.58        14.93        24.99         1.02        38.04 
TCGA-29-1688 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1703 
       78.87         0.79        33.70        31.17        68.28        59.67 
TCGA-29-1711 TCGA-29-1761 TCGA-29-1769 TCGA-29-1770 TCGA-29-1775 TCGA-29-1777 
       34.62        17.00        22.98        24.36        12.36        12.30 
TCGA-29-2414 TCGA-29-2428 TCGA-29-2434 TCGA-30-1853 TCGA-30-1861 TCGA-30-1866 
       86.17        45.11        11.47        36.26        34.78        36.62 
TCGA-31-1953 TCGA-36-1571 TCGA-36-1581 TCGA-36-2529 TCGA-36-2538 TCGA-36-2543 
        6.71        22.85        24.69        35.05        25.08         2.24 
TCGA-36-2549 TCGA-36-2552 TCGA-42-2589 TCGA-57-1582 TCGA-57-1993 TCGA-59-2348 
        6.05        11.47         7.56        24.03        25.05       180.16 
TCGA-59-2352 TCGA-61-1724 TCGA-61-1725 TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 
        9.40        20.94        31.40        27.88         4.34        31.76 
TCGA-61-1738 TCGA-61-1741 TCGA-61-1743 TCGA-61-1904 TCGA-61-1910 TCGA-61-1911 
       35.80        33.67        43.69         9.07        37.02        42.48 
TCGA-61-1917 TCGA-61-1919 TCGA-61-2012 TCGA-61-2018 TCGA-61-2092 TCGA-61-2102 
       43.43        38.17        30.64        45.40        51.72         6.48 
TCGA-61-2111 TCGA-61-2113 
      125.72        22.22 

$`11Q LOSS WILD-TYPE`
TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1342 TCGA-04-1343 
       41.00         1.81        49.15         2.01        18.51        11.87 
TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 TCGA-04-1351 
       65.49        63.06        48.76        21.57        63.98        65.46 
TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1371 TCGA-04-1514 
       32.52        44.32        33.67        76.54        82.36        56.55 
TCGA-04-1516 TCGA-04-1525 TCGA-04-1530 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 
       41.59        38.37       119.08        84.20        55.40        48.89 
TCGA-04-1646 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 TCGA-09-0364 TCGA-09-0365 
       27.88        36.23        31.86        47.70        29.16         9.47 
TCGA-09-0367 TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 
       17.95         9.96        38.43        89.33        74.89        41.59 
TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 
       61.87        55.36        30.48         5.85         3.02         8.55 
TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 
       97.55         6.15         6.12        35.15         4.50       112.37 
TCGA-09-2050 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0927 
       71.11        20.91        26.93        12.46        54.31        81.47 
TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-13-0714 
       32.28        11.70         3.88        35.41        35.80         6.21 
TCGA-13-0717 TCGA-13-0720 TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0755 
       24.59        44.55        12.39        31.07        15.19         2.47 
TCGA-13-0761 TCGA-13-0764 TCGA-13-0766 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 
       34.06        31.04        21.40        38.93        36.72        28.70 
TCGA-13-0794 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 TCGA-13-0802 
       30.35         8.71         7.79         8.12         8.28         8.19 
TCGA-13-0803 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 
       43.82        35.28        13.61        68.91       107.18        91.40 
TCGA-13-0886 TCGA-13-0887 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 
       74.27        66.64        61.81        67.99        69.01        43.36 
TCGA-13-0897 TCGA-13-0901 TCGA-13-0903 TCGA-13-0905 TCGA-13-0910 TCGA-13-0911 
       57.47        19.36        47.38        47.84        37.08        27.68 
TCGA-13-0912 TCGA-13-0916 TCGA-13-0919 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 
       34.06        21.14        14.89         6.41         6.08        10.88 
TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 TCGA-13-1410 TCGA-13-1412 TCGA-13-1481 
        7.36         6.05         5.92         4.70         5.33        87.06 
TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 TCGA-13-1491 TCGA-13-1492 
       98.04        20.68        22.39        70.82        52.44        73.55 
TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1504 
        4.24        54.31        37.61        38.37        13.97        16.57 
TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-2057 
        4.41         4.77         4.14         2.56         3.88        14.24 
TCGA-13-2059 TCGA-13-2061 TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 TCGA-20-0996 
       12.23        10.78         6.28        23.05        25.94        72.20 
TCGA-20-1682 TCGA-20-1684 TCGA-20-1685 TCGA-20-1687 TCGA-23-1021 TCGA-23-1022 
       27.48        19.07        16.67         2.66        47.54        42.51 
TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 
       40.54        15.39        26.83        31.73        49.41         8.81 
TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 
       29.10        18.87         2.24        51.35        54.51         3.22 
TCGA-23-1116 TCGA-23-1117 TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 TCGA-23-1123 
        4.57        33.30       129.96         4.27         6.38        33.47 
TCGA-23-1124 TCGA-23-1809 TCGA-23-2072 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 
       58.13         0.53        24.95        87.48        91.66        77.00 
TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0975 
       49.84         2.76         4.70         4.50         7.63        21.80 
TCGA-24-0979 TCGA-24-0980 TCGA-24-1103 TCGA-24-1104 TCGA-24-1413 TCGA-24-1416 
       41.56         7.66        54.08        63.55         6.31         6.38 
TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 
        7.82         7.99         7.86         0.76         6.25         6.02 
TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 
        5.95         5.36         4.80        17.36        28.34        19.17 
TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 TCGA-24-1464 TCGA-24-1467 TCGA-24-1469 
       18.67        43.53         8.55        12.46       105.99         9.11 
TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 
        3.42         1.18        22.19        57.37        64.27        16.21 
TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 
       56.58        41.06        51.91        41.39        58.09        88.50 
TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1563 TCGA-24-1564 
       70.62        39.88        19.53        44.09        47.70        25.87 
TCGA-24-1565 TCGA-24-1603 TCGA-24-1604 TCGA-24-1616 TCGA-24-1843 TCGA-24-1844 
       10.26        90.15        88.34        38.24         3.48         3.72 
TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 TCGA-24-1924 
        3.81         4.37        11.28         5.75         5.49        30.21 
TCGA-24-1927 TCGA-24-1928 TCGA-24-1930 TCGA-24-2023 TCGA-24-2024 TCGA-24-2027 
       16.41        11.05        81.11        44.84        58.16       109.68 
TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 
       14.43        53.95        18.48        28.18        64.01        44.48 
TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 
        0.36        47.54        31.63        44.58         0.82        67.36 
TCGA-24-2290 TCGA-24-2297 TCGA-25-1312 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 
       36.23        55.86         1.02        31.99        51.06        37.02 
TCGA-25-1317 TCGA-25-1322 TCGA-25-1323 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 
        1.02         2.99        12.00        18.58        18.02        15.78 
TCGA-25-1627 TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 
        0.36         7.86         0.30        56.94        60.59        35.54 
TCGA-25-1635 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2396 
       51.22        18.05        85.05        13.02        49.05         3.02 
TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 
       12.00        45.01        19.99        42.02         2.96        29.00 
TCGA-25-2408 TCGA-25-2409 TCGA-29-1690 TCGA-29-1691 TCGA-29-1693 TCGA-29-1694 
       30.97        26.96        44.71        47.18       101.75        38.53 
TCGA-29-1699 TCGA-29-1701 TCGA-29-1702 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 
        0.53        16.90        18.64        18.25        41.95        29.23 
TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 TCGA-29-1771 
       85.68        66.77        62.93        39.09        31.23        22.52 
TCGA-29-1774 TCGA-29-1776 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 
       17.29        11.84        14.93         8.35         7.20         5.36 
TCGA-29-1785 TCGA-29-2425 TCGA-29-2427 TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 
       34.62        65.00        62.47         4.87        42.25        11.84 
TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 
        9.76        38.07        51.91         2.47        15.68         0.26 
TCGA-30-1859 TCGA-30-1860 TCGA-30-1862 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 
       48.07        44.91         6.08         1.18        57.57        24.26 
TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 
       30.05        48.79        45.57        30.18        18.77        22.45 
TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 
       42.51        44.09         2.17        28.73        29.06        21.53 
TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 
       22.55         8.55        30.05        25.74        27.85        24.23 
TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2540 TCGA-36-2542 
       33.01        29.49        29.79        25.91        23.80        21.60 
TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 TCGA-36-2548 TCGA-36-2551 TCGA-42-2582 
       20.98        18.31        20.52        14.17        16.14        26.04 
TCGA-42-2587 TCGA-42-2588 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1583 
       23.74         9.44         7.46        22.39         1.48        11.38 
TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 TCGA-57-1994 TCGA-59-2349 
       21.14         1.74        22.32        28.96        25.02        80.12 
TCGA-59-2350 TCGA-59-2351 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 
       22.32       116.12        34.39         2.14         5.39        44.78 
TCGA-61-1721 TCGA-61-1722 TCGA-61-1727 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 
       11.11         8.05        18.54        28.47        48.79        44.84 
TCGA-61-1740 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 
        2.43         1.41         8.42         5.79        11.41        13.02 
TCGA-61-1906 TCGA-61-1907 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 TCGA-61-1918 
       34.13        31.30        48.92        56.58        67.73        15.75 
TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 
        1.97         5.52        14.50        17.98         3.98        30.61 
TCGA-61-2009 TCGA-61-2016 TCGA-61-2017 TCGA-61-2087 TCGA-61-2088 TCGA-61-2094 
       39.85         1.18        45.96         4.80         4.77        71.74 
TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2104 
       61.64        58.39        60.62        65.49        55.50        76.83 
TCGA-61-2109 TCGA-61-2110 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
       20.68        44.52         6.35        31.07         8.58 

  11Q LOSS MUTATED 11Q LOSS WILD-TYPE 
              0.79               0.26 
  11Q LOSS MUTATED 11Q LOSS WILD-TYPE 
            180.16             129.96 
  11Q LOSS MUTATED 11Q LOSS WILD-TYPE 
             31.30              26.83 
[1] "0.8 - 180.2 (31.3)" "0.3 - 130.0 (26.8)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-2614 
"11Q LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-2614 
"11Q LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED"   "11Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "11Q LOSS MUTATED"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE"   "11Q LOSS MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "11Q LOSS MUTATED" "11Q LOSS WILD-TYPE" "11Q LOSS WILD-TYPE" 
        TCGA-61-2614 
"11Q LOSS WILD-TYPE" 
[1] "hr=" "1"  
D62V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  11Q LOSS MUTATED         1   146                1
  11Q LOSS WILD-TYPE       1   402                1
D62V3, multiclass
                  clus
vv                 11Q LOSS MUTATED 11Q LOSS WILD-TYPE
  OMENTUM                         1                  1
  OVARY                         146                402
  PERITONEUM OVARY                1                  1
D62V4, continuous
D62V5, binary
                    cls
clus                   0   1
  11Q LOSS MUTATED     1 150
  11Q LOSS WILD-TYPE   2 409
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  11Q LOSS MUTATED      1  150
  11Q LOSS WILD-TYPE    2  409
     clus
vv    11Q LOSS MUTATED 11Q LOSS WILD-TYPE
  NO                 1                  2
  YES              150                409
                    vv
clus                 R0 R1 R2
  11Q LOSS MUTATED    5  5  0
  11Q LOSS WILD-TYPE  9 21  2
D62V6, multiclass
    clus
vv   11Q LOSS MUTATED 11Q LOSS WILD-TYPE
  R0                5                  9
  R1                5                 21
  R2                0                  2

Clustering(63) Variable = 12P LOSS MUTATION ANALYSIS
D63V1, survival
                    sevent
clus2                  0   1
  12P LOSS MUTATED    39  41
  12P LOSS WILD-TYPE 222 245
  12P LOSS MUTATED 12P LOSS WILD-TYPE 
                80                467 
  12P LOSS MUTATED 12P LOSS WILD-TYPE 
                41                245 
$`12P LOSS MUTATED`
TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1349 TCGA-04-1364 TCGA-04-1638 
        1.81        49.15         2.01        21.57        33.67        55.40 
TCGA-09-1667 TCGA-09-1675 TCGA-09-2044 TCGA-10-0936 TCGA-13-0724 TCGA-13-0751 
       61.87        97.55         6.12        35.80         2.73        55.17 
TCGA-13-0755 TCGA-13-0758 TCGA-13-0766 TCGA-13-0793 TCGA-13-0803 TCGA-13-0807 
        2.47        11.38        21.40        28.70        43.82        13.61 
TCGA-13-0885 TCGA-13-0891 TCGA-13-0905 TCGA-13-0908 TCGA-13-0919 TCGA-13-1403 
       91.40        69.01        47.84        44.84        14.89        10.88 
TCGA-13-1405 TCGA-13-1483 TCGA-13-1488 TCGA-13-1489 TCGA-13-1494 TCGA-13-1497 
        7.36        29.39        70.82        82.88        38.17        54.31 
TCGA-13-1501 TCGA-13-1507 TCGA-13-1512 TCGA-20-0987 TCGA-20-1685 TCGA-23-1120 
       32.84         4.77         3.09        23.05        16.67         4.27 
TCGA-23-1122 TCGA-23-2072 TCGA-23-2078 TCGA-24-0979 TCGA-24-1105 TCGA-24-1425 
       39.09        24.95        87.48        41.56        47.41         5.95 
TCGA-24-1428 TCGA-24-1435 TCGA-24-1471 TCGA-24-1550 TCGA-24-1849 TCGA-24-2026 
       17.36        43.53         1.18        41.06         5.75        34.82 
TCGA-24-2036 TCGA-24-2297 TCGA-25-1320 TCGA-25-1632 TCGA-25-2397 TCGA-25-2404 
       64.01        55.86        36.95        56.94        12.00        29.00 
TCGA-25-2409 TCGA-29-1688 TCGA-29-1691 TCGA-29-1703 TCGA-29-1711 TCGA-29-1764 
       26.96        78.87        47.18        59.67        34.62        62.93 
TCGA-29-1776 TCGA-29-2432 TCGA-30-1718 TCGA-30-1853 TCGA-30-1857 TCGA-30-1861 
       11.84        11.84        51.91        36.26         0.26        34.78 
TCGA-36-1578 TCGA-36-2538 TCGA-36-2542 TCGA-36-2549 TCGA-57-1585 TCGA-61-1727 
       27.85        25.08        21.60         6.05         1.74        18.54 
TCGA-61-1734 TCGA-61-1738 TCGA-61-1903 TCGA-61-1910 TCGA-61-1913 TCGA-61-1919 
       28.47        35.80        13.02        37.02        48.92        38.17 
TCGA-61-2008 TCGA-61-2102 
       30.61         6.48 

$`12P LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1338 TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 
       40.24        41.00        46.62        18.51        11.87        65.49 
TCGA-04-1347 TCGA-04-1348 TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 
       63.06        48.76        63.98        65.46        49.28        32.52 
TCGA-04-1362 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 
       44.32        76.54        71.47        82.36        56.55        41.59 
TCGA-04-1517 TCGA-04-1525 TCGA-04-1530 TCGA-04-1536 TCGA-04-1542 TCGA-04-1644 
       19.99        38.37       119.08        29.06        84.20        48.89 
TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 
       27.88        28.64        64.64        36.23        31.86        47.70 
TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 
       45.34        29.16         9.47        57.73        17.95        35.54 
TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 
        9.96        38.43        89.33        74.89        41.59        57.57 
TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 
       55.36        30.48        17.98         5.85         3.02         8.55 
TCGA-09-2043 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 
        6.15        35.15         4.50       112.37        71.11        63.09 
TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 
       39.75        20.91        26.93        12.46        54.31        25.91 
TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 
       81.47        18.48        33.24        32.28        11.70         3.88 
TCGA-10-0935 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 
       35.41        15.12        19.86         6.21        24.59        44.55 
TCGA-13-0723 TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0757 
       39.58        12.39        31.07        15.19        17.79        11.18 
TCGA-13-0760 TCGA-13-0761 TCGA-13-0762 TCGA-13-0764 TCGA-13-0768 TCGA-13-0791 
       11.54        34.06        32.25        31.04         8.42        38.93 
TCGA-13-0792 TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 
       36.72        30.35        19.56         8.71         7.79         8.12 
TCGA-13-0801 TCGA-13-0802 TCGA-13-0804 TCGA-13-0805 TCGA-13-0883 TCGA-13-0884 
        8.28         8.19        35.28        35.28        68.91       107.18 
TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 TCGA-13-0893 
       74.27        66.64        70.39        61.81        67.99        43.36 
TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 
       57.47        56.15        57.07        19.36        47.38        48.33 
TCGA-13-0906 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 
       44.94        37.08        27.68        34.06        29.98        21.14 
TCGA-13-0920 TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1404 TCGA-13-1407 
       13.81         4.64         6.41         6.08         6.61         6.05 
TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 
        5.92         6.84         4.70         4.21         5.33        54.61 
TCGA-13-1481 TCGA-13-1482 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 TCGA-13-1491 
       87.06        61.71        98.04        20.68        22.39        52.44 
TCGA-13-1492 TCGA-13-1495 TCGA-13-1496 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 
       73.55        49.22         4.24        37.61        38.37        13.97 
TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 
       16.57         4.21         4.41         4.14         2.56         3.88 
TCGA-13-2057 TCGA-13-2059 TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 
       14.24        12.23         8.58        10.78         8.75         6.28 
TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 
       25.94        26.20        72.20        27.48        25.38        19.07 
TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 
        2.93         2.66        47.54        42.51        40.54        15.39 
TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 
       26.83        31.73        49.41         8.81        29.10        18.87 
TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 
        2.24        51.35        54.51         3.22        31.20        68.68 
TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 TCGA-23-1121 TCGA-23-1123 
        4.57        33.30        86.01       129.96         6.38        33.47 
TCGA-23-1124 TCGA-23-1809 TCGA-23-2077 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 
       58.13         0.53       115.89        91.66        77.00        49.84 
TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 
        2.76         4.70         4.50         7.63        19.63        11.64 
TCGA-24-0975 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 TCGA-24-1413 
       21.80         7.66        22.32        54.08        63.55         6.31 
TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 
        6.38         7.82         7.99         7.86         0.76         6.25 
TCGA-24-1424 TCGA-24-1426 TCGA-24-1427 TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 
        6.02         5.36         4.80        28.34        19.17        18.67 
TCGA-24-1436 TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 TCGA-24-1469 
        8.55        72.92        12.46        45.14       105.99         9.11 
TCGA-24-1470 TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 
        3.42        22.19        26.96        57.37        64.27        16.21 
TCGA-24-1549 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 
       56.58        51.91        41.39        58.09        88.50        70.62 
TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 
       39.88        19.53        44.09        45.50        47.70        25.87 
TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 
       10.26        17.23        90.15        88.34        48.33        38.24 
TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 
        8.32         3.48         3.72         3.81         4.37        11.28 
TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 
        5.49         9.80        22.65        30.21        16.41        11.05 
TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 TCGA-24-2027 
       81.11         4.87       151.99        44.84        58.16       109.68 
TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 TCGA-24-2038 TCGA-24-2254 
       14.43        53.95        18.48        28.18        44.48        57.07 
TCGA-24-2260 TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 
       36.16         0.79         0.36        47.54        31.63        70.45 
TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 
       44.58         0.82        67.36        36.23        16.64        33.11 
TCGA-24-2298 TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 
       53.26         1.02        26.93        31.99        51.06        37.02 
TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 
        1.02        34.98        65.00        33.96         2.99        12.00 
TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 
        2.96        18.58        18.02        15.78         0.36        20.58 
TCGA-25-1630 TCGA-25-1631 TCGA-25-1633 TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 
        7.86         0.30        60.59        35.54        51.22        14.93 
TCGA-25-1871 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 
       24.99        18.05        85.05        13.02        49.05         1.02 
TCGA-25-2393 TCGA-25-2396 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 
       38.04         3.02        45.01        19.99        42.02         2.96 
TCGA-25-2408 TCGA-29-1690 TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 
       30.97        44.71       101.75        38.53         0.79        33.70 
TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 TCGA-29-1702 TCGA-29-1705 
       31.17        68.28         0.53        16.90        18.64        18.25 
TCGA-29-1707 TCGA-29-1710 TCGA-29-1761 TCGA-29-1762 TCGA-29-1763 TCGA-29-1766 
       41.95        29.23        17.00        85.68        66.77        39.09 
TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 
       31.23        22.98        24.36        22.52        17.29        12.36 
TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 
       12.30        14.93         8.35         7.20         5.36        34.62 
TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 
       86.17        65.00        62.47        45.11         4.87        42.25 
TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1855 TCGA-30-1856 TCGA-30-1859 
       11.47         9.76        38.07         2.47        15.68        48.07 
TCGA-30-1860 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 
       44.91         6.08        36.62         1.18        57.57        24.26 
TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 
       30.05        48.79        45.57        30.18        18.77        22.45 
TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1569 
        6.71        42.51        44.09         2.17        28.73        29.06 
TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 
       21.53        22.85        22.55         8.55        30.05        25.74 
TCGA-36-1580 TCGA-36-1581 TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 
       24.23        24.69        35.05        33.01        29.49        29.79 
TCGA-36-2537 TCGA-36-2540 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 
       25.91        23.80         2.24        20.98        18.31        20.52 
TCGA-36-2548 TCGA-36-2551 TCGA-36-2552 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 
       14.17        16.14        11.47        26.04        23.74         9.44 
TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 
        7.56         7.46        22.39         1.48        24.03        11.38 
TCGA-57-1584 TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 
       21.14        22.32        28.96        25.05        25.02       180.16 
TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 
       80.12        22.32       116.12         9.40        34.39         2.14 
TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 
        5.39        44.78        11.11         8.05        20.94        31.40 
TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 TCGA-61-1736 TCGA-61-1737 TCGA-61-1740 
       27.88         4.34        31.76        48.79        44.84         2.43 
TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 
       33.67        43.69         1.41         8.42         5.79        11.41 
TCGA-61-1904 TCGA-61-1906 TCGA-61-1907 TCGA-61-1911 TCGA-61-1914 TCGA-61-1915 
        9.07        34.13        31.30        42.48        56.58        67.73 
TCGA-61-1917 TCGA-61-1918 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 
       43.43        15.75         1.97         5.52        14.50        17.98 
TCGA-61-2003 TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 
        3.98        39.85        30.64         1.18        45.96        45.40 
TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 
        4.80         4.77        51.72        71.74        61.64        58.39 
TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 
       60.62        65.49        55.50        76.83        20.68        44.52 
TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
      125.72        22.22         6.35        31.07         8.58 

  12P LOSS MUTATED 12P LOSS WILD-TYPE 
              0.26               0.30 
  12P LOSS MUTATED 12P LOSS WILD-TYPE 
             97.55             180.16 
  12P LOSS MUTATED 12P LOSS WILD-TYPE 
            31.725             26.960 
[1] "0.3 - 97.5 (31.7)"  "0.3 - 180.2 (27.0)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
  "12P LOSS MUTATED"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED"   "12P LOSS MUTATED" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED"   "12P LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED"   "12P LOSS MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-2614 
"12P LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
  "12P LOSS MUTATED"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED"   "12P LOSS MUTATED" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED"   "12P LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED"   "12P LOSS MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-2614 
"12P LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
  "12P LOSS MUTATED"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED"   "12P LOSS MUTATED" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED"   "12P LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED"   "12P LOSS MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "12P LOSS MUTATED" "12P LOSS WILD-TYPE"   "12P LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"12P LOSS WILD-TYPE"   "12P LOSS MUTATED" "12P LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" "12P LOSS WILD-TYPE" 
        TCGA-61-2614 
"12P LOSS WILD-TYPE" 
[1] "hr=" "1"  
D63V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  12P LOSS MUTATED         0    80                0
  12P LOSS WILD-TYPE       2   468                2
D63V3, multiclass
                  clus
vv                 12P LOSS MUTATED 12P LOSS WILD-TYPE
  OMENTUM                         0                  2
  OVARY                          80                468
  PERITONEUM OVARY                0                  2
D63V4, continuous
D63V5, binary
                    cls
clus                   0   1
  12P LOSS MUTATED     0  81
  12P LOSS WILD-TYPE   3 478
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  12P LOSS MUTATED      0   81
  12P LOSS WILD-TYPE    3  478
     clus
vv    12P LOSS MUTATED 12P LOSS WILD-TYPE
  NO                 0                  3
  YES               81                478
                    vv
clus                 R0 R1 R2
  12P LOSS MUTATED    1  4  0
  12P LOSS WILD-TYPE 13 22  2
D63V6, multiclass
    clus
vv   12P LOSS MUTATED 12P LOSS WILD-TYPE
  R0                1                 13
  R1                4                 22
  R2                0                  2

Clustering(64) Variable = 12Q LOSS MUTATION ANALYSIS
D64V1, survival
                    sevent
clus2                  0   1
  12Q LOSS MUTATED    51  49
  12Q LOSS WILD-TYPE 210 237
  12Q LOSS MUTATED 12Q LOSS WILD-TYPE 
               100                447 
  12Q LOSS MUTATED 12Q LOSS WILD-TYPE 
                49                237 
$`12Q LOSS MUTATED`
TCGA-04-1335 TCGA-04-1349 TCGA-04-1356 TCGA-04-1371 TCGA-04-1542 TCGA-04-1638 
        1.81        21.57        49.28        82.36        84.20        55.40 
TCGA-09-1659 TCGA-09-1667 TCGA-09-1674 TCGA-09-1675 TCGA-09-2044 TCGA-13-0724 
        9.96        61.87         8.55        97.55         6.12         2.73 
TCGA-13-0751 TCGA-13-0755 TCGA-13-0758 TCGA-13-0760 TCGA-13-0762 TCGA-13-0766 
       55.17         2.47        11.38        11.54        32.25        21.40 
TCGA-13-0793 TCGA-13-0803 TCGA-13-0807 TCGA-13-0885 TCGA-13-0891 TCGA-13-0904 
       28.70        43.82        13.61        91.40        69.01        48.33 
TCGA-13-0905 TCGA-13-0908 TCGA-13-0919 TCGA-13-0923 TCGA-13-1405 TCGA-13-1408 
       47.84        44.84        14.89         6.41         7.36         5.92 
TCGA-13-1411 TCGA-13-1483 TCGA-13-1489 TCGA-13-1497 TCGA-13-1501 TCGA-13-1507 
        4.21        29.39        82.88        54.31        32.84         4.77 
TCGA-13-1512 TCGA-13-2059 TCGA-20-0987 TCGA-23-1118 TCGA-23-1120 TCGA-23-1122 
        3.09        12.23        23.05        86.01         4.27        39.09 
TCGA-23-2072 TCGA-23-2077 TCGA-23-2078 TCGA-24-0980 TCGA-24-0982 TCGA-24-1104 
       24.95       115.89        87.48         7.66        22.32        63.55 
TCGA-24-1105 TCGA-24-1425 TCGA-24-1428 TCGA-24-1431 TCGA-24-1471 TCGA-24-1550 
       47.41         5.95        17.36        19.17         1.18        41.06 
TCGA-24-1604 TCGA-24-1614 TCGA-24-1849 TCGA-24-1920 TCGA-24-1927 TCGA-24-2023 
       88.34        48.33         5.75         9.80        16.41        44.84 
TCGA-24-2026 TCGA-24-2036 TCGA-24-2254 TCGA-24-2297 TCGA-25-1314 TCGA-25-1320 
       34.82        64.01        57.07        55.86        31.99        36.95 
TCGA-25-1632 TCGA-25-1877 TCGA-25-2397 TCGA-25-2409 TCGA-29-1688 TCGA-29-1691 
       56.94        18.05        12.00        26.96        78.87        47.18 
TCGA-29-1703 TCGA-29-1711 TCGA-29-1776 TCGA-29-2427 TCGA-29-2432 TCGA-30-1718 
       59.67        34.62        11.84        62.47        11.84        51.91 
TCGA-30-1853 TCGA-30-1857 TCGA-30-1861 TCGA-30-1891 TCGA-31-1956 TCGA-36-1578 
       36.26         0.26        34.78        30.05        44.09        27.85 
TCGA-36-2538 TCGA-36-2542 TCGA-36-2549 TCGA-59-2363 TCGA-61-1727 TCGA-61-1734 
       25.08        21.60         6.05         5.39        18.54        28.47 
TCGA-61-1738 TCGA-61-1895 TCGA-61-1903 TCGA-61-1904 TCGA-61-1913 TCGA-61-1917 
       35.80         1.41        13.02         9.07        48.92        43.43 
TCGA-61-1919 TCGA-61-2008 TCGA-61-2087 TCGA-61-2104 
       38.17        30.61         4.80        76.83 

$`12Q LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 TCGA-04-1342 
       40.24        41.00        49.15         2.01        46.62        18.51 
TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1350 TCGA-04-1351 
       11.87        65.49        63.06        48.76        63.98        65.46 
TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1514 
       32.52        44.32        33.67        76.54        71.47        56.55 
TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 TCGA-04-1530 TCGA-04-1536 TCGA-04-1644 
       41.59        19.99        38.37       119.08        29.06        48.89 
TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 
       27.88        28.64        64.64        36.23        31.86        47.70 
TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 
       45.34        29.16         9.47        57.73        17.95        35.54 
TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1668 
       38.43        89.33        74.89        41.59        57.57        55.36 
TCGA-09-1669 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 TCGA-09-2043 TCGA-09-2045 
       30.48        17.98         5.85         3.02         6.15        35.15 
TCGA-09-2048 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 
        4.50       112.37        71.11        63.09        39.75        20.91 
TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 
       26.93        12.46        54.31        25.91        81.47        18.48 
TCGA-10-0930 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 
       33.24        32.28        11.70         3.88        35.41        35.80 
TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 
       15.12        19.86         6.21        24.59        44.55        39.58 
TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0757 TCGA-13-0761 
       12.39        31.07        15.19        17.79        11.18        34.06 
TCGA-13-0764 TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0794 TCGA-13-0795 
       31.04         8.42        38.93        36.72        30.35        19.56 
TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 TCGA-13-0802 TCGA-13-0804 
        8.71         7.79         8.12         8.28         8.19        35.28 
TCGA-13-0805 TCGA-13-0883 TCGA-13-0884 TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 
       35.28        68.91       107.18        74.27        66.64        70.39 
TCGA-13-0889 TCGA-13-0890 TCGA-13-0893 TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 
       61.81        67.99        43.36        57.47        56.15        57.07 
TCGA-13-0901 TCGA-13-0903 TCGA-13-0906 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 
       19.36        47.38        44.94        37.08        27.68        34.06 
TCGA-13-0913 TCGA-13-0916 TCGA-13-0920 TCGA-13-0921 TCGA-13-0924 TCGA-13-1403 
       29.98        21.14        13.81         4.64         6.08        10.88 
TCGA-13-1404 TCGA-13-1407 TCGA-13-1409 TCGA-13-1410 TCGA-13-1412 TCGA-13-1477 
        6.61         6.05         6.84         4.70         5.33        54.61 
TCGA-13-1481 TCGA-13-1482 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 
       87.06        61.71        98.04        20.68        22.39        70.82 
TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 TCGA-13-1498 
       52.44        73.55        38.17        49.22         4.24        37.61 
TCGA-13-1499 TCGA-13-1500 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1509 
       38.37        13.97        16.57         4.21         4.41         4.14 
TCGA-13-1510 TCGA-13-1511 TCGA-13-2057 TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 
        2.56         3.88        14.24         8.58        10.78         8.75 
TCGA-13-2071 TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 TCGA-20-1683 
        6.28        25.94        26.20        72.20        27.48        25.38 
TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 TCGA-23-1022 
       19.07        16.67         2.93         2.66        47.54        42.51 
TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 
       40.54        15.39        26.83        31.73        49.41         8.81 
TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 
       29.10        18.87         2.24        51.35        54.51         3.22 
TCGA-23-1113 TCGA-23-1114 TCGA-23-1116 TCGA-23-1117 TCGA-23-1119 TCGA-23-1121 
       31.20        68.68         4.57        33.30       129.96         6.38 
TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 
       33.47        58.13         0.53        91.66        77.00        49.84 
TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 
        2.76         4.70         4.50         7.63        19.63        11.64 
TCGA-24-0975 TCGA-24-0979 TCGA-24-1103 TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 
       21.80        41.56        54.08         6.31         6.38         7.82 
TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 TCGA-24-1426 
        7.99         7.86         0.76         6.25         6.02         5.36 
TCGA-24-1427 TCGA-24-1430 TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 
        4.80        28.34        18.67        43.53         8.55        72.92 
TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1474 
       12.46        45.14       105.99         9.11         3.42        22.19 
TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 TCGA-24-1551 
       26.96        57.37        64.27        16.21        56.58        51.91 
TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 
       41.39        58.09        88.50        70.62        39.88        19.53 
TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 
       44.09        45.50        47.70        25.87        10.26        17.23 
TCGA-24-1603 TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 TCGA-24-1845 
       90.15        38.24         8.32         3.48         3.72         3.81 
TCGA-24-1846 TCGA-24-1847 TCGA-24-1850 TCGA-24-1923 TCGA-24-1924 TCGA-24-1928 
        4.37        11.28         5.49        22.65        30.21        11.05 
TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 TCGA-24-2024 TCGA-24-2027 TCGA-24-2029 
       81.11         4.87       151.99        58.16       109.68        14.43 
TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 TCGA-24-2038 TCGA-24-2260 TCGA-24-2261 
       53.95        18.48        28.18        44.48        36.16         0.79 
TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 
        0.36        47.54        31.63        70.45        44.58         0.82 
TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2298 TCGA-25-1312 
       67.36        36.23        16.64        33.11        53.26         1.02 
TCGA-25-1313 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 
       26.93        51.06        37.02         1.02        34.98        65.00 
TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 
       33.96         2.99        12.00         2.96        18.58        18.02 
TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 TCGA-25-1630 TCGA-25-1631 TCGA-25-1633 
       15.78         0.36        20.58         7.86         0.30        60.59 
TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 TCGA-25-1878 TCGA-25-2042 
       35.54        51.22        14.93        24.99        85.05        13.02 
TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 TCGA-25-2396 TCGA-25-2398 TCGA-25-2399 
       49.05         1.02        38.04         3.02        45.01        19.99 
TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-29-1690 TCGA-29-1693 
       42.02         2.96        29.00        30.97        44.71       101.75 
TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 
       38.53         0.79        33.70        31.17        68.28         0.53 
TCGA-29-1701 TCGA-29-1702 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1761 
       16.90        18.64        18.25        41.95        29.23        17.00 
TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 
       85.68        66.77        62.93        39.09        31.23        22.98 
TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 TCGA-29-1777 TCGA-29-1778 
       24.36        22.52        17.29        12.36        12.30        14.93 
TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 
        8.35         7.20         5.36        34.62        86.17        65.00 
TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 
       45.11         4.87        42.25        11.47         9.76        38.07 
TCGA-30-1855 TCGA-30-1856 TCGA-30-1859 TCGA-30-1860 TCGA-30-1862 TCGA-30-1866 
        2.47        15.68        48.07        44.91         6.08        36.62 
TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 
        1.18        57.57        24.26        48.79        45.57        30.18 
TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 TCGA-31-1959 TCGA-36-1568 
       18.77        22.45         6.71        42.51         2.17        28.73 
TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 
       29.06        21.53        22.85        22.55         8.55        30.05 
TCGA-36-1577 TCGA-36-1580 TCGA-36-1581 TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 
       25.74        24.23        24.69        35.05        33.01        29.49 
TCGA-36-2534 TCGA-36-2537 TCGA-36-2540 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 
       29.79        25.91        23.80         2.24        20.98        18.31 
TCGA-36-2547 TCGA-36-2548 TCGA-36-2551 TCGA-36-2552 TCGA-42-2582 TCGA-42-2587 
       20.52        14.17        16.14        11.47        26.04        23.74 
TCGA-42-2588 TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 
        9.44         7.56         7.46        22.39         1.48        24.03 
TCGA-57-1583 TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 
       11.38        21.14         1.74        22.32        28.96        25.05 
TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 
       25.02       180.16        80.12        22.32       116.12         9.40 
TCGA-59-2354 TCGA-59-2355 TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 
       34.39         2.14        44.78        11.11         8.05        20.94 
TCGA-61-1725 TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 TCGA-61-1736 TCGA-61-1737 
       31.40        27.88         4.34        31.76        48.79        44.84 
TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 
        2.43        33.67        43.69         8.42         5.79        11.41 
TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1914 TCGA-61-1915 
       34.13        31.30        37.02        42.48        56.58        67.73 
TCGA-61-1918 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 
       15.75         1.97         5.52        14.50        17.98         3.98 
TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2088 
       39.85        30.64         1.18        45.96        45.40         4.77 
TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 
       51.72        71.74        61.64        58.39        60.62        65.49 
TCGA-61-2101 TCGA-61-2102 TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 
       55.50         6.48        20.68        44.52       125.72        22.22 
TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
        6.35        31.07         8.58 

  12Q LOSS MUTATED 12Q LOSS WILD-TYPE 
              0.26               0.30 
  12Q LOSS MUTATED 12Q LOSS WILD-TYPE 
            115.89             180.16 
  12Q LOSS MUTATED 12Q LOSS WILD-TYPE 
             29.72              27.68 
[1] "0.3 - 115.9 (29.7)" "0.3 - 180.2 (27.7)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "12Q LOSS MUTATED"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "12Q LOSS MUTATED"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED"   "12Q LOSS MUTATED" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED"   "12Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED"   "12Q LOSS MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "12Q LOSS MUTATED"   "12Q LOSS MUTATED"   "12Q LOSS MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED"   "12Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED"   "12Q LOSS MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-2614 
"12Q LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "12Q LOSS MUTATED"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "12Q LOSS MUTATED"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED"   "12Q LOSS MUTATED" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED"   "12Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED"   "12Q LOSS MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "12Q LOSS MUTATED"   "12Q LOSS MUTATED"   "12Q LOSS MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED"   "12Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED"   "12Q LOSS MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-2614 
"12Q LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "12Q LOSS MUTATED"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "12Q LOSS MUTATED"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED"   "12Q LOSS MUTATED" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED"   "12Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED"   "12Q LOSS MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "12Q LOSS MUTATED"   "12Q LOSS MUTATED"   "12Q LOSS MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED"   "12Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED"   "12Q LOSS MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" "12Q LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE"   "12Q LOSS MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" "12Q LOSS WILD-TYPE" 
        TCGA-61-2614 
"12Q LOSS WILD-TYPE" 
[1] "hr=" "1.2"
D64V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  12Q LOSS MUTATED         0   101                0
  12Q LOSS WILD-TYPE       2   447                2
D64V3, multiclass
                  clus
vv                 12Q LOSS MUTATED 12Q LOSS WILD-TYPE
  OMENTUM                         0                  2
  OVARY                         101                447
  PERITONEUM OVARY                0                  2
D64V4, continuous
D64V5, binary
                    cls
clus                   0   1
  12Q LOSS MUTATED     0 103
  12Q LOSS WILD-TYPE   3 456
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  12Q LOSS MUTATED      0  103
  12Q LOSS WILD-TYPE    3  456
     clus
vv    12Q LOSS MUTATED 12Q LOSS WILD-TYPE
  NO                 0                  3
  YES              103                456
                    vv
clus                 R0 R1 R2
  12Q LOSS MUTATED    2  5  0
  12Q LOSS WILD-TYPE 12 21  2
D64V6, multiclass
    clus
vv   12Q LOSS MUTATED 12Q LOSS WILD-TYPE
  R0                2                 12
  R1                5                 21
  R2                0                  2

Clustering(65) Variable = 13Q LOSS MUTATION ANALYSIS
D65V1, survival
                    sevent
clus2                  0   1
  13Q LOSS MUTATED   141 147
  13Q LOSS WILD-TYPE 120 139
  13Q LOSS MUTATED 13Q LOSS WILD-TYPE 
               288                259 
  13Q LOSS MUTATED 13Q LOSS WILD-TYPE 
               147                139 
$`13Q LOSS MUTATED`
TCGA-04-1332 TCGA-04-1335 TCGA-04-1342 TCGA-04-1343 TCGA-04-1347 TCGA-04-1349 
       41.00         1.81        18.51        11.87        63.06        21.57 
TCGA-04-1361 TCGA-04-1365 TCGA-04-1367 TCGA-04-1514 TCGA-04-1516 TCGA-04-1525 
       32.52        76.54        71.47        56.55        41.59        38.37 
TCGA-04-1530 TCGA-04-1638 TCGA-04-1646 TCGA-04-1648 TCGA-04-1651 TCGA-04-1652 
      119.08        55.40        27.88        28.64        36.23        31.86 
TCGA-04-1654 TCGA-04-1655 TCGA-09-0366 TCGA-09-0367 TCGA-09-1659 TCGA-09-1661 
       47.70        45.34        57.73        17.95         9.96        38.43 
TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 TCGA-09-1670 TCGA-09-1673 
       41.59        57.57        61.87        55.36        17.98         3.02 
TCGA-09-1674 TCGA-09-2044 TCGA-09-2050 TCGA-09-2051 TCGA-09-2055 TCGA-10-0925 
        8.55         6.12        71.11        63.09        26.93        54.31 
TCGA-10-0927 TCGA-10-0930 TCGA-10-0931 TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 
       81.47        33.24        32.28        35.80        15.12        19.86 
TCGA-13-0717 TCGA-13-0720 TCGA-13-0724 TCGA-13-0726 TCGA-13-0730 TCGA-13-0751 
       24.59        44.55         2.73        31.07        17.79        55.17 
TCGA-13-0755 TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 TCGA-13-0792 TCGA-13-0793 
        2.47        31.04        21.40         8.42        36.72        28.70 
TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 TCGA-13-0802 TCGA-13-0804 
       19.56         8.71         7.79         8.12         8.19        35.28 
TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0888 
       35.28        13.61        68.91       107.18        91.40        70.39 
TCGA-13-0890 TCGA-13-0891 TCGA-13-0897 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 
       67.99        69.01        57.47        57.07        19.36        47.38 
TCGA-13-0904 TCGA-13-0906 TCGA-13-0910 TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 
       48.33        44.94        37.08        21.14        14.89        13.81 
TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1409 TCGA-13-1482 TCGA-13-1483 
        6.08        10.88         6.61         6.84        61.71        29.39 
TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 
       22.39        70.82        82.88        73.55        38.17        49.22 
TCGA-13-1497 TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 
       54.31        38.37        13.97        32.84        16.57         4.21 
TCGA-13-1509 TCGA-13-1511 TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0991 
        4.14         3.88        10.78         8.75         6.28        26.20 
TCGA-20-1682 TCGA-20-1684 TCGA-20-1685 TCGA-23-1021 TCGA-23-1023 TCGA-23-1024 
       27.48        19.07        16.67        47.54        40.54        15.39 
TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1031 TCGA-23-1032 TCGA-23-1114 
       31.73        49.41         8.81        18.87         2.24        68.68 
TCGA-23-1116 TCGA-23-1118 TCGA-23-1119 TCGA-23-1121 TCGA-23-1123 TCGA-23-1124 
        4.57        86.01       129.96         6.38        33.47        58.13 
TCGA-23-1809 TCGA-23-2077 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 
        0.53       115.89        77.00        49.84         2.76         4.70 
TCGA-23-2645 TCGA-24-0968 TCGA-24-0975 TCGA-24-0980 TCGA-24-1103 TCGA-24-1105 
        4.50        19.63        21.80         7.66        54.08        47.41 
TCGA-24-1413 TCGA-24-1417 TCGA-24-1419 TCGA-24-1424 TCGA-24-1425 TCGA-24-1426 
        6.31         7.82         7.86         6.02         5.95         5.36 
TCGA-24-1428 TCGA-24-1430 TCGA-24-1435 TCGA-24-1464 TCGA-24-1466 TCGA-24-1469 
       17.36        28.34        43.53        12.46        45.14         9.11 
TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1548 TCGA-24-1549 TCGA-24-1552 
       22.19        26.96        57.37        16.21        56.58        41.39 
TCGA-24-1555 TCGA-24-1558 TCGA-24-1560 TCGA-24-1563 TCGA-24-1564 TCGA-24-1603 
       88.50        19.53        44.09        47.70        25.87        90.15 
TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 TCGA-24-1845 
       48.33        38.24         8.32         3.48         3.72         3.81 
TCGA-24-1846 TCGA-24-1847 TCGA-24-1850 TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 
        4.37        11.28         5.49        30.21        16.41        11.05 
TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2030 
        4.87       151.99        44.84        58.16        34.82        53.95 
TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2289 
       57.07        36.16         0.79         0.36        47.54        67.36 
TCGA-24-2290 TCGA-25-1313 TCGA-25-1315 TCGA-25-1318 TCGA-25-1319 TCGA-25-1321 
       36.23        26.93        51.06        34.98        65.00        33.96 
TCGA-25-1329 TCGA-25-1627 TCGA-25-1628 TCGA-25-1631 TCGA-25-1633 TCGA-25-1634 
        2.96         0.36        20.58         0.30        60.59        35.54 
TCGA-25-1635 TCGA-25-1878 TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 TCGA-25-2396 
       51.22        85.05        49.05         1.02        38.04         3.02 
TCGA-25-2397 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 TCGA-25-2409 
       12.00        19.99        42.02         2.96        29.00        26.96 
TCGA-29-1693 TCGA-29-1694 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 
      101.75        38.53        31.17        68.28         0.53        16.90 
TCGA-29-1702 TCGA-29-1703 TCGA-29-1707 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 
       18.64        59.67        41.95        66.77        62.93        39.09 
TCGA-29-1768 TCGA-29-1771 TCGA-29-1775 TCGA-29-1776 TCGA-29-1777 TCGA-29-1778 
       31.23        22.52        12.36        11.84        12.30        14.93 
TCGA-29-1784 TCGA-29-2427 TCGA-29-2431 TCGA-29-2432 TCGA-30-1860 TCGA-30-1861 
        5.36        62.47        42.25        11.84        44.91        34.78 
TCGA-30-1866 TCGA-30-1891 TCGA-31-1950 TCGA-31-1953 TCGA-31-1955 TCGA-31-1959 
       36.62        30.05        18.77         6.71        42.51         2.17 
TCGA-36-1569 TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1580 TCGA-36-1581 
       29.06        22.85        22.55         8.55        24.23        24.69 
TCGA-36-2529 TCGA-36-2534 TCGA-36-2542 TCGA-36-2543 TCGA-36-2545 TCGA-36-2551 
       35.05        29.79        21.60         2.24        18.31        16.14 
TCGA-42-2587 TCGA-42-2590 TCGA-57-1584 TCGA-57-1992 TCGA-59-2350 TCGA-59-2351 
       23.74         7.46        21.14        28.96        22.32       116.12 
TCGA-59-2352 TCGA-59-2354 TCGA-59-2372 TCGA-61-1722 TCGA-61-1724 TCGA-61-1725 
        9.40        34.39        44.78         8.05        20.94        31.40 
TCGA-61-1727 TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 TCGA-61-1737 TCGA-61-1738 
       18.54         4.34        31.76        28.47        44.84        35.80 
TCGA-61-1740 TCGA-61-1743 TCGA-61-1899 TCGA-61-1901 TCGA-61-1903 TCGA-61-1906 
        2.43        43.69         8.42        11.41        13.02        34.13 
TCGA-61-1907 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 TCGA-61-1918 TCGA-61-1919 
       31.30        48.92        56.58        67.73        15.75        38.17 
TCGA-61-1995 TCGA-61-2002 TCGA-61-2012 TCGA-61-2016 TCGA-61-2018 TCGA-61-2087 
        1.97        17.98        30.64         1.18        45.40         4.80 
TCGA-61-2088 TCGA-61-2094 TCGA-61-2097 TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 
        4.77        71.74        60.62        44.52       125.72        22.22 

$`13Q LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 TCGA-04-1346 TCGA-04-1348 
       40.24        49.15         2.01        46.62        65.49        48.76 
TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1362 TCGA-04-1364 TCGA-04-1371 
       63.98        65.46        49.28        44.32        33.67        82.36 
TCGA-04-1517 TCGA-04-1536 TCGA-04-1542 TCGA-04-1644 TCGA-04-1649 TCGA-09-0364 
       19.99        29.06        84.20        48.89        64.64        29.16 
TCGA-09-0365 TCGA-09-0369 TCGA-09-1662 TCGA-09-1664 TCGA-09-1669 TCGA-09-1672 
        9.47        35.54        89.33        74.89        30.48         5.85 
TCGA-09-1675 TCGA-09-2043 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 TCGA-09-2053 
       97.55         6.15        35.15         4.50       112.37        39.75 
TCGA-09-2054 TCGA-09-2056 TCGA-10-0926 TCGA-10-0928 TCGA-10-0933 TCGA-10-0934 
       20.91        12.46        25.91        18.48        11.70         3.88 
TCGA-10-0935 TCGA-13-0714 TCGA-13-0723 TCGA-13-0725 TCGA-13-0727 TCGA-13-0757 
       35.41         6.21        39.58        12.39        15.19        11.18 
TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 TCGA-13-0762 TCGA-13-0791 TCGA-13-0794 
       11.38        11.54        34.06        32.25        38.93        30.35 
TCGA-13-0801 TCGA-13-0803 TCGA-13-0886 TCGA-13-0887 TCGA-13-0889 TCGA-13-0893 
        8.28        43.82        74.27        66.64        61.81        43.36 
TCGA-13-0899 TCGA-13-0905 TCGA-13-0908 TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 
       56.15        47.84        44.84        27.68        34.06        29.98 
TCGA-13-0921 TCGA-13-0923 TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 TCGA-13-1410 
        4.64         6.41         7.36         6.05         5.92         4.70 
TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 TCGA-13-1484 TCGA-13-1485 
        4.21         5.33        54.61        87.06        98.04        20.68 
TCGA-13-1491 TCGA-13-1496 TCGA-13-1498 TCGA-13-1506 TCGA-13-1507 TCGA-13-1510 
       52.44         4.24        37.61         4.41         4.77         2.56 
TCGA-13-1512 TCGA-13-2057 TCGA-13-2059 TCGA-13-2060 TCGA-20-0987 TCGA-20-0990 
        3.09        14.24        12.23         8.58        23.05        25.94 
TCGA-20-0996 TCGA-20-1683 TCGA-20-1686 TCGA-20-1687 TCGA-23-1022 TCGA-23-1026 
       72.20        25.38         2.93         2.66        42.51        26.83 
TCGA-23-1030 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 TCGA-23-1117 
       29.10        51.35        54.51         3.22        31.20        33.30 
TCGA-23-1120 TCGA-23-1122 TCGA-23-2072 TCGA-23-2078 TCGA-23-2079 TCGA-24-0966 
        4.27        39.09        24.95        87.48        91.66         7.63 
TCGA-24-0970 TCGA-24-0979 TCGA-24-0982 TCGA-24-1104 TCGA-24-1416 TCGA-24-1418 
       11.64        41.56        22.32        63.55         6.38         7.99 
TCGA-24-1422 TCGA-24-1423 TCGA-24-1427 TCGA-24-1431 TCGA-24-1434 TCGA-24-1436 
        0.76         6.25         4.80        19.17        18.67         8.55 
TCGA-24-1463 TCGA-24-1467 TCGA-24-1470 TCGA-24-1471 TCGA-24-1546 TCGA-24-1550 
       72.92       105.99         3.42         1.18        64.27        41.06 
TCGA-24-1551 TCGA-24-1553 TCGA-24-1556 TCGA-24-1557 TCGA-24-1562 TCGA-24-1565 
       51.91        58.09        70.62        39.88        45.50        10.26 
TCGA-24-1567 TCGA-24-1604 TCGA-24-1849 TCGA-24-1920 TCGA-24-1923 TCGA-24-1930 
       17.23        88.34         5.75         9.80        22.65        81.11 
TCGA-24-2027 TCGA-24-2029 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 
      109.68        14.43        18.48        28.18        64.01        44.48 
TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 TCGA-24-2293 TCGA-24-2295 
       31.63        70.45        44.58         0.82        16.64        33.11 
TCGA-24-2297 TCGA-24-2298 TCGA-25-1312 TCGA-25-1314 TCGA-25-1316 TCGA-25-1317 
       55.86        53.26         1.02        31.99        37.02         1.02 
TCGA-25-1320 TCGA-25-1322 TCGA-25-1323 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 
       36.95         2.99        12.00        18.58        18.02        15.78 
TCGA-25-1630 TCGA-25-1632 TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 TCGA-25-2042 
        7.86        56.94        14.93        24.99        18.05        13.02 
TCGA-25-2398 TCGA-25-2408 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 TCGA-29-1695 
       45.01        30.97        78.87        44.71        47.18         0.79 
TCGA-29-1696 TCGA-29-1705 TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 
       33.70        18.25        29.23        34.62        17.00        85.68 
TCGA-29-1769 TCGA-29-1770 TCGA-29-1774 TCGA-29-1781 TCGA-29-1783 TCGA-29-1785 
       22.98        24.36        17.29         8.35         7.20        34.62 
TCGA-29-2414 TCGA-29-2425 TCGA-29-2428 TCGA-29-2429 TCGA-29-2434 TCGA-29-2436 
       86.17        65.00        45.11         4.87        11.47         9.76 
TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 
       38.07        51.91        36.26         2.47        15.68         0.26 
TCGA-30-1859 TCGA-30-1862 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 TCGA-30-1892 
       48.07         6.08         1.18        57.57        24.26        48.79 
TCGA-31-1944 TCGA-31-1946 TCGA-31-1951 TCGA-31-1956 TCGA-36-1568 TCGA-36-1570 
       45.57        30.18        22.45        44.09        28.73        21.53 
TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 TCGA-36-2530 TCGA-36-2532 TCGA-36-2537 
       30.05        25.74        27.85        33.01        29.49        25.91 
TCGA-36-2538 TCGA-36-2540 TCGA-36-2544 TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 
       25.08        23.80        20.98        20.52        14.17         6.05 
TCGA-36-2552 TCGA-42-2582 TCGA-42-2588 TCGA-42-2589 TCGA-42-2591 TCGA-42-2593 
       11.47        26.04         9.44         7.56        22.39         1.48 
TCGA-57-1582 TCGA-57-1583 TCGA-57-1585 TCGA-57-1586 TCGA-57-1993 TCGA-57-1994 
       24.03        11.38         1.74        22.32        25.05        25.02 
TCGA-59-2348 TCGA-59-2349 TCGA-59-2355 TCGA-59-2363 TCGA-61-1721 TCGA-61-1728 
      180.16        80.12         2.14         5.39        11.11        27.88 
TCGA-61-1736 TCGA-61-1741 TCGA-61-1895 TCGA-61-1900 TCGA-61-1904 TCGA-61-1910 
       48.79        33.67         1.41         5.79         9.07        37.02 
TCGA-61-1911 TCGA-61-1917 TCGA-61-1998 TCGA-61-2000 TCGA-61-2003 TCGA-61-2008 
       42.48        43.43         5.52        14.50         3.98        30.61 
TCGA-61-2009 TCGA-61-2017 TCGA-61-2092 TCGA-61-2095 TCGA-61-2096 TCGA-61-2098 
       39.85        45.96        51.72        61.64        58.39        65.49 
TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 TCGA-61-2612 TCGA-61-2613 
       55.50         6.48        76.83        20.68         6.35        31.07 
TCGA-61-2614 
        8.58 

  13Q LOSS MUTATED 13Q LOSS WILD-TYPE 
              0.30               0.26 
  13Q LOSS MUTATED 13Q LOSS WILD-TYPE 
            151.99             180.16 
  13Q LOSS MUTATED 13Q LOSS WILD-TYPE 
             28.98              26.04 
[1] "0.3 - 152.0 (29.0)" "0.3 - 180.2 (26.0)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-61-2614 
"13Q LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-61-2614 
"13Q LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
  "13Q LOSS MUTATED"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"13Q LOSS WILD-TYPE"   "13Q LOSS MUTATED"   "13Q LOSS MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "13Q LOSS MUTATED" "13Q LOSS WILD-TYPE" "13Q LOSS WILD-TYPE" 
        TCGA-61-2614 
"13Q LOSS WILD-TYPE" 
[1] "hr=" "1.1"
D65V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  13Q LOSS MUTATED         1   289                2
  13Q LOSS WILD-TYPE       1   259                0
D65V3, multiclass
                  clus
vv                 13Q LOSS MUTATED 13Q LOSS WILD-TYPE
  OMENTUM                         1                  1
  OVARY                         289                259
  PERITONEUM OVARY                2                  0
D65V4, continuous
D65V5, binary
                    cls
clus                   0   1
  13Q LOSS MUTATED     1 298
  13Q LOSS WILD-TYPE   2 261
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  13Q LOSS MUTATED      1  298
  13Q LOSS WILD-TYPE    2  261
     clus
vv    13Q LOSS MUTATED 13Q LOSS WILD-TYPE
  NO                 1                  2
  YES              298                261
                    vv
clus                 R0 R1 R2
  13Q LOSS MUTATED    4 10  0
  13Q LOSS WILD-TYPE 10 16  2
D65V6, multiclass
    clus
vv   13Q LOSS MUTATED 13Q LOSS WILD-TYPE
  R0                4                 10
  R1               10                 16
  R2                0                  2

Clustering(66) Variable = 14Q LOSS MUTATION ANALYSIS
D66V1, survival
                    sevent
clus2                  0   1
  14Q LOSS MUTATED    88 110
  14Q LOSS WILD-TYPE 173 176
  14Q LOSS MUTATED 14Q LOSS WILD-TYPE 
               198                349 
  14Q LOSS MUTATED 14Q LOSS WILD-TYPE 
               110                176 
$`14Q LOSS MUTATED`
TCGA-04-1332 TCGA-04-1335 TCGA-04-1343 TCGA-04-1346 TCGA-04-1351 TCGA-04-1356 
       41.00         1.81        11.87        65.49        65.46        49.28 
TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1525 TCGA-04-1530 
       32.52        44.32        33.67        76.54        38.37       119.08 
TCGA-04-1542 TCGA-04-1638 TCGA-04-1648 TCGA-04-1649 TCGA-04-1655 TCGA-09-0369 
       84.20        55.40        28.64        64.64        45.34        35.54 
TCGA-09-1659 TCGA-09-1661 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 TCGA-09-2048 
        9.96        38.43        17.98         5.85         3.02         4.50 
TCGA-09-2051 TCGA-09-2053 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0928 
       63.09        39.75        12.46        54.31        25.91        18.48 
TCGA-10-0938 TCGA-13-0717 TCGA-13-0723 TCGA-13-0724 TCGA-13-0726 TCGA-13-0727 
       19.86        24.59        39.58         2.73        31.07        15.19 
TCGA-13-0730 TCGA-13-0751 TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 
       17.79        55.17        11.18        11.38        11.54        34.06 
TCGA-13-0766 TCGA-13-0792 TCGA-13-0794 TCGA-13-0795 TCGA-13-0803 TCGA-13-0884 
       21.40        36.72        30.35        19.56        43.82       107.18 
TCGA-13-0885 TCGA-13-0888 TCGA-13-0891 TCGA-13-0906 TCGA-13-0913 TCGA-13-0919 
       91.40        70.39        69.01        44.94        29.98        14.89 
TCGA-13-0920 TCGA-13-0921 TCGA-13-1405 TCGA-13-1407 TCGA-13-1411 TCGA-13-1481 
       13.81         4.64         7.36         6.05         4.21        87.06 
TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 TCGA-13-1496 TCGA-13-1497 
       22.39        70.82        82.88        52.44         4.24        54.31 
TCGA-13-1499 TCGA-13-1504 TCGA-13-1507 TCGA-13-1510 TCGA-13-2061 TCGA-13-2065 
       38.37        16.57         4.77         2.56        10.78         8.75 
TCGA-13-2071 TCGA-20-1683 TCGA-20-1684 TCGA-20-1687 TCGA-23-1024 TCGA-23-1027 
        6.28        25.38        19.07         2.66        15.39        31.73 
TCGA-23-1028 TCGA-23-1030 TCGA-23-1031 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 
       49.41        29.10        18.87        51.35        54.51         3.22 
TCGA-23-1114 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 TCGA-23-1122 TCGA-23-1123 
       68.68        33.30        86.01       129.96        39.09        33.47 
TCGA-23-2072 TCGA-23-2077 TCGA-23-2081 TCGA-23-2643 TCGA-24-0968 TCGA-24-0970 
       24.95       115.89        77.00         4.70        19.63        11.64 
TCGA-24-0975 TCGA-24-0979 TCGA-24-0982 TCGA-24-1105 TCGA-24-1424 TCGA-24-1427 
       21.80        41.56        22.32        47.41         6.02         4.80 
TCGA-24-1434 TCGA-24-1463 TCGA-24-1466 TCGA-24-1469 TCGA-24-1471 TCGA-24-1544 
       18.67        72.92        45.14         9.11         1.18        26.96 
TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 TCGA-24-1551 TCGA-24-1552 TCGA-24-1565 
       64.27        16.21        56.58        51.91        41.39        10.26 
TCGA-24-1604 TCGA-24-1614 TCGA-24-1843 TCGA-24-1846 TCGA-24-1924 TCGA-24-2019 
       88.34        48.33         3.48         4.37        30.21         4.87 
TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2029 TCGA-24-2260 
      151.99        44.84        58.16        34.82        14.43        36.16 
TCGA-24-2267 TCGA-24-2288 TCGA-24-2295 TCGA-25-1320 TCGA-25-1323 TCGA-25-1631 
       47.54         0.82        33.11        36.95        12.00         0.30 
TCGA-25-1632 TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 
       56.94        35.54        51.22        14.93        24.99        18.05 
TCGA-25-2391 TCGA-25-2393 TCGA-25-2400 TCGA-25-2404 TCGA-29-1693 TCGA-29-1695 
       49.05        38.04        42.02        29.00       101.75         0.79 
TCGA-29-1697 TCGA-29-1698 TCGA-29-1707 TCGA-29-1710 TCGA-29-1761 TCGA-29-1763 
       31.17        68.28        41.95        29.23        17.00        66.77 
TCGA-29-1766 TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 TCGA-29-1775 TCGA-29-1777 
       39.09        22.98        24.36        22.52        12.36        12.30 
TCGA-29-2427 TCGA-29-2434 TCGA-30-1718 TCGA-30-1855 TCGA-30-1859 TCGA-30-1861 
       62.47        11.47        51.91         2.47        48.07        34.78 
TCGA-30-1887 TCGA-31-1944 TCGA-31-1950 TCGA-31-1953 TCGA-36-1571 TCGA-36-1574 
       24.26        45.57        18.77         6.71        22.85        22.55 
TCGA-36-1575 TCGA-36-1576 TCGA-36-1578 TCGA-36-2534 TCGA-36-2543 TCGA-36-2551 
        8.55        30.05        27.85        29.79         2.24        16.14 
TCGA-36-2552 TCGA-42-2587 TCGA-42-2589 TCGA-42-2591 TCGA-42-2593 TCGA-57-1992 
       11.47        23.74         7.56        22.39         1.48        28.96 
TCGA-57-1993 TCGA-59-2372 TCGA-61-1722 TCGA-61-1728 TCGA-61-1733 TCGA-61-1736 
       25.05        44.78         8.05        27.88        31.76        48.79 
TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 TCGA-61-1901 TCGA-61-1904 TCGA-61-1906 
        2.43        33.67        43.69        11.41         9.07        34.13 
TCGA-61-1917 TCGA-61-2000 TCGA-61-2009 TCGA-61-2088 TCGA-61-2102 TCGA-61-2109 
       43.43        14.50        39.85         4.77         6.48        20.68 

$`14Q LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 TCGA-04-1342 TCGA-04-1347 
       40.24        49.15         2.01        46.62        18.51        63.06 
TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 
       48.76        21.57        63.98        71.47        82.36        56.55 
TCGA-04-1516 TCGA-04-1517 TCGA-04-1536 TCGA-04-1644 TCGA-04-1646 TCGA-04-1651 
       41.59        19.99        29.06        48.89        27.88        36.23 
TCGA-04-1652 TCGA-04-1654 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 
       31.86        47.70        29.16         9.47        57.73        17.95 
TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 
       89.33        74.89        41.59        57.57        61.87        55.36 
TCGA-09-1669 TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 
       30.48         8.55        97.55         6.15         6.12        35.15 
TCGA-09-2049 TCGA-09-2050 TCGA-09-2054 TCGA-09-2055 TCGA-10-0927 TCGA-10-0930 
      112.37        71.11        20.91        26.93        81.47        33.24 
TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 
       32.28        11.70         3.88        35.41        35.80        15.12 
TCGA-13-0714 TCGA-13-0720 TCGA-13-0725 TCGA-13-0755 TCGA-13-0762 TCGA-13-0764 
        6.21        44.55        12.39         2.47        32.25        31.04 
TCGA-13-0768 TCGA-13-0791 TCGA-13-0793 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 
        8.42        38.93        28.70         8.71         7.79         8.12 
TCGA-13-0801 TCGA-13-0802 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 
        8.28         8.19        35.28        35.28        13.61        68.91 
TCGA-13-0886 TCGA-13-0887 TCGA-13-0889 TCGA-13-0890 TCGA-13-0893 TCGA-13-0897 
       74.27        66.64        61.81        67.99        43.36        57.47 
TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 
       56.15        57.07        19.36        47.38        48.33        47.84 
TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0916 TCGA-13-0923 
       44.84        37.08        27.68        34.06        21.14         6.41 
TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 
        6.08        10.88         6.61         5.92         6.84         4.70 
TCGA-13-1412 TCGA-13-1477 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 
        5.33        54.61        61.71        29.39        98.04        20.68 
TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1498 TCGA-13-1500 TCGA-13-1501 
       73.55        38.17        49.22        37.61        13.97        32.84 
TCGA-13-1505 TCGA-13-1506 TCGA-13-1509 TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 
        4.21         4.41         4.14         3.88         3.09        14.24 
TCGA-13-2059 TCGA-13-2060 TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 
       12.23         8.58        23.05        25.94        26.20        72.20 
TCGA-20-1682 TCGA-20-1685 TCGA-20-1686 TCGA-23-1021 TCGA-23-1022 TCGA-23-1023 
       27.48        16.67         2.93        47.54        42.51        40.54 
TCGA-23-1026 TCGA-23-1029 TCGA-23-1032 TCGA-23-1113 TCGA-23-1116 TCGA-23-1120 
       26.83         8.81         2.24        31.20         4.57         4.27 
TCGA-23-1121 TCGA-23-1124 TCGA-23-1809 TCGA-23-2078 TCGA-23-2079 TCGA-23-2084 
        6.38        58.13         0.53        87.48        91.66        49.84 
TCGA-23-2641 TCGA-23-2645 TCGA-24-0966 TCGA-24-0980 TCGA-24-1103 TCGA-24-1104 
        2.76         4.50         7.63         7.66        54.08        63.55 
TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 
        6.31         6.38         7.82         7.99         7.86         0.76 
TCGA-24-1423 TCGA-24-1425 TCGA-24-1426 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 
        6.25         5.95         5.36        17.36        28.34        19.17 
TCGA-24-1435 TCGA-24-1436 TCGA-24-1464 TCGA-24-1467 TCGA-24-1470 TCGA-24-1474 
       43.53         8.55        12.46       105.99         3.42        22.19 
TCGA-24-1545 TCGA-24-1550 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 
       57.37        41.06        58.09        88.50        70.62        39.88 
TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1567 
       19.53        44.09        45.50        47.70        25.87        17.23 
TCGA-24-1603 TCGA-24-1616 TCGA-24-1842 TCGA-24-1844 TCGA-24-1845 TCGA-24-1847 
       90.15        38.24         8.32         3.72         3.81        11.28 
TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 TCGA-24-1927 TCGA-24-1928 
        5.75         5.49         9.80        22.65        16.41        11.05 
TCGA-24-1930 TCGA-24-2027 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 
       81.11       109.68        53.95        18.48        28.18        64.01 
TCGA-24-2038 TCGA-24-2254 TCGA-24-2261 TCGA-24-2262 TCGA-24-2271 TCGA-24-2280 
       44.48        57.07         0.79         0.36        31.63        70.45 
TCGA-24-2281 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2297 TCGA-24-2298 
       44.58        67.36        36.23        16.64        55.86        53.26 
TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 
        1.02        26.93        31.99        51.06        37.02         1.02 
TCGA-25-1318 TCGA-25-1319 TCGA-25-1321 TCGA-25-1322 TCGA-25-1329 TCGA-25-1623 
       34.98        65.00        33.96         2.99         2.96        18.58 
TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 TCGA-25-1630 TCGA-25-1633 
       18.02        15.78         0.36        20.58         7.86        60.59 
TCGA-25-1878 TCGA-25-2042 TCGA-25-2392 TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 
       85.05        13.02         1.02         3.02        12.00        45.01 
TCGA-25-2399 TCGA-25-2401 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 
       19.99         2.96        30.97        26.96        78.87        44.71 
TCGA-29-1691 TCGA-29-1694 TCGA-29-1696 TCGA-29-1699 TCGA-29-1701 TCGA-29-1702 
       47.18        38.53        33.70         0.53        16.90        18.64 
TCGA-29-1703 TCGA-29-1705 TCGA-29-1711 TCGA-29-1762 TCGA-29-1764 TCGA-29-1768 
       59.67        18.25        34.62        85.68        62.93        31.23 
TCGA-29-1774 TCGA-29-1776 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 
       17.29        11.84        14.93         8.35         7.20         5.36 
TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 
       34.62        86.17        65.00        45.11         4.87        42.25 
TCGA-29-2432 TCGA-29-2436 TCGA-30-1714 TCGA-30-1853 TCGA-30-1856 TCGA-30-1857 
       11.84         9.76        38.07        36.26        15.68         0.26 
TCGA-30-1860 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1891 
       44.91         6.08        36.62         1.18        57.57        30.05 
TCGA-30-1892 TCGA-31-1946 TCGA-31-1951 TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 
       48.79        30.18        22.45        42.51        44.09         2.17 
TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 TCGA-36-1577 TCGA-36-1580 TCGA-36-1581 
       28.73        29.06        21.53        25.74        24.23        24.69 
TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 
       35.05        33.01        29.49        25.91        25.08        23.80 
TCGA-36-2542 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 
       21.60        20.98        18.31        20.52        14.17         6.05 
TCGA-42-2582 TCGA-42-2588 TCGA-42-2590 TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 
       26.04         9.44         7.46        24.03        11.38        21.14 
TCGA-57-1585 TCGA-57-1586 TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 
        1.74        22.32        25.02       180.16        80.12        22.32 
TCGA-59-2351 TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-61-1721 
      116.12         9.40        34.39         2.14         5.39        11.11 
TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1730 TCGA-61-1734 TCGA-61-1737 
       20.94        31.40        18.54         4.34        28.47        44.84 
TCGA-61-1738 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 TCGA-61-1903 TCGA-61-1907 
       35.80         1.41         8.42         5.79        13.02        31.30 
TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 TCGA-61-1918 
       37.02        42.48        48.92        56.58        67.73        15.75 
TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 
       38.17         1.97         5.52        17.98         3.98        30.61 
TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2092 
       30.64         1.18        45.96        45.40         4.80        51.72 
TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 
       71.74        61.64        58.39        60.62        65.49        55.50 
TCGA-61-2104 TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 
       76.83        44.52       125.72        22.22         6.35        31.07 
TCGA-61-2614 
        8.58 

  14Q LOSS MUTATED 14Q LOSS WILD-TYPE 
              0.30               0.26 
  14Q LOSS MUTATED 14Q LOSS WILD-TYPE 
            151.99             180.16 
  14Q LOSS MUTATED 14Q LOSS WILD-TYPE 
             28.98              27.68 
[1] "0.3 - 152.0 (29.0)" "0.3 - 180.2 (27.7)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-2614 
"14Q LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-2614 
"14Q LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED"   "14Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "14Q LOSS MUTATED"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"14Q LOSS WILD-TYPE"   "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "14Q LOSS MUTATED" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" "14Q LOSS WILD-TYPE" 
        TCGA-61-2614 
"14Q LOSS WILD-TYPE" 
[1] "hr=" "1.1"
D66V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  14Q LOSS MUTATED         0   199                1
  14Q LOSS WILD-TYPE       2   349                1
D66V3, multiclass
                  clus
vv                 14Q LOSS MUTATED 14Q LOSS WILD-TYPE
  OMENTUM                         0                  2
  OVARY                         199                349
  PERITONEUM OVARY                1                  1
D66V4, continuous
D66V5, binary
                    cls
clus                   0   1
  14Q LOSS MUTATED     0 205
  14Q LOSS WILD-TYPE   3 354
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  14Q LOSS MUTATED      0  205
  14Q LOSS WILD-TYPE    3  354
     clus
vv    14Q LOSS MUTATED 14Q LOSS WILD-TYPE
  NO                 0                  3
  YES              205                354
                    vv
clus                 R0 R1 R2
  14Q LOSS MUTATED    5  5  1
  14Q LOSS WILD-TYPE  9 21  1
D66V6, multiclass
    clus
vv   14Q LOSS MUTATED 14Q LOSS WILD-TYPE
  R0                5                  9
  R1                5                 21
  R2                1                  1

Clustering(67) Variable = 15Q LOSS MUTATION ANALYSIS
D67V1, survival
                    sevent
clus2                  0   1
  15Q LOSS MUTATED   108 150
  15Q LOSS WILD-TYPE 153 136
  15Q LOSS MUTATED 15Q LOSS WILD-TYPE 
               258                289 
  15Q LOSS MUTATED 15Q LOSS WILD-TYPE 
               150                136 
$`15Q LOSS MUTATED`
TCGA-04-1331 TCGA-04-1338 TCGA-04-1342 TCGA-04-1347 TCGA-04-1350 TCGA-04-1367 
       40.24        46.62        18.51        63.06        63.98        71.47 
TCGA-04-1371 TCGA-04-1514 TCGA-04-1517 TCGA-04-1525 TCGA-04-1536 TCGA-04-1646 
       82.36        56.55        19.99        38.37        29.06        27.88 
TCGA-04-1648 TCGA-04-1649 TCGA-04-1652 TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 
       28.64        64.64        31.86        45.34        29.16         9.47 
TCGA-09-1659 TCGA-09-1661 TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 
        9.96        38.43        61.87        55.36        30.48        17.98 
TCGA-09-1674 TCGA-09-2050 TCGA-09-2051 TCGA-09-2054 TCGA-10-0925 TCGA-10-0926 
        8.55        71.11        63.09        20.91        54.31        25.91 
TCGA-10-0927 TCGA-10-0930 TCGA-10-0936 TCGA-13-0717 TCGA-13-0723 TCGA-13-0724 
       81.47        33.24        35.80        24.59        39.58         2.73 
TCGA-13-0730 TCGA-13-0751 TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 TCGA-13-0762 
       17.79        55.17        11.18        11.38        11.54        32.25 
TCGA-13-0793 TCGA-13-0794 TCGA-13-0802 TCGA-13-0803 TCGA-13-0807 TCGA-13-0883 
       28.70        30.35         8.19        43.82        13.61        68.91 
TCGA-13-0884 TCGA-13-0885 TCGA-13-0887 TCGA-13-0889 TCGA-13-0891 TCGA-13-0899 
      107.18        91.40        66.64        61.81        69.01        56.15 
TCGA-13-0910 TCGA-13-0911 TCGA-13-0921 TCGA-13-0923 TCGA-13-1405 TCGA-13-1407 
       37.08        27.68         4.64         6.41         7.36         6.05 
TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 TCGA-13-1411 TCGA-13-1482 TCGA-13-1484 
        5.92         6.84         4.70         4.21        61.71        98.04 
TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 TCGA-13-1494 TCGA-13-1495 
       22.39        70.82        82.88        52.44        38.17        49.22 
TCGA-13-1496 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-1510 
        4.24        16.57         4.21         4.41         4.77         2.56 
TCGA-13-2061 TCGA-20-0990 TCGA-20-0991 TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 
       10.78        25.94        26.20        27.48        25.38        19.07 
TCGA-20-1686 TCGA-23-1022 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 
        2.93        42.51        29.10        18.87         2.24        51.35 
TCGA-23-1110 TCGA-23-1113 TCGA-23-1114 TCGA-23-1116 TCGA-23-1123 TCGA-23-2077 
       54.51        31.20        68.68         4.57        33.47       115.89 
TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0968 TCGA-24-0979 
       49.84         2.76         4.70         4.50        19.63        41.56 
TCGA-24-0982 TCGA-24-1104 TCGA-24-1105 TCGA-24-1417 TCGA-24-1418 TCGA-24-1422 
       22.32        63.55        47.41         7.82         7.99         0.76 
TCGA-24-1424 TCGA-24-1426 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 
        6.02         5.36        17.36        28.34        19.17        18.67 
TCGA-24-1436 TCGA-24-1463 TCGA-24-1466 TCGA-24-1469 TCGA-24-1471 TCGA-24-1544 
        8.55        72.92        45.14         9.11         1.18        26.96 
TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1552 TCGA-24-1553 TCGA-24-1556 
       16.21        56.58        41.06        41.39        58.09        70.62 
TCGA-24-1557 TCGA-24-1564 TCGA-24-1603 TCGA-24-1614 TCGA-24-1616 TCGA-24-1843 
       39.88        25.87        90.15        48.33        38.24         3.48 
TCGA-24-1844 TCGA-24-1845 TCGA-24-1850 TCGA-24-1920 TCGA-24-1924 TCGA-24-1927 
        3.72         3.81         5.49         9.80        30.21        16.41 
TCGA-24-1928 TCGA-24-2019 TCGA-24-2020 TCGA-24-2026 TCGA-24-2030 TCGA-24-2036 
       11.05         4.87       151.99        34.82        53.95        64.01 
TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 TCGA-24-2280 TCGA-24-2288 TCGA-24-2293 
       57.07        36.16         0.79        70.45         0.82        16.64 
TCGA-24-2295 TCGA-24-2297 TCGA-24-2298 TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 
       33.11        55.86        53.26         1.02        26.93        31.99 
TCGA-25-1316 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 
       37.02        34.98        65.00        36.95        33.96         2.99 
TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 TCGA-25-1628 TCGA-25-1631 TCGA-25-1632 
       12.00         2.96        18.58        20.58         0.30        56.94 
TCGA-25-1633 TCGA-25-1634 TCGA-25-1871 TCGA-25-1877 TCGA-25-2396 TCGA-25-2397 
       60.59        35.54        24.99        18.05         3.02        12.00 
TCGA-25-2404 TCGA-29-1693 TCGA-29-1695 TCGA-29-1698 TCGA-29-1699 TCGA-29-1702 
       29.00       101.75         0.79        68.28         0.53        18.64 
TCGA-29-1703 TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 
       59.67        41.95        29.23        34.62        17.00        85.68 
TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1769 TCGA-29-1770 TCGA-29-1774 
       66.77        62.93        39.09        22.98        24.36        17.29 
TCGA-29-1777 TCGA-29-1783 TCGA-29-1784 TCGA-29-2414 TCGA-29-2428 TCGA-29-2429 
       12.30         7.20         5.36        86.17        45.11         4.87 
TCGA-29-2432 TCGA-29-2434 TCGA-30-1714 TCGA-30-1718 TCGA-30-1855 TCGA-30-1856 
       11.84        11.47        38.07        51.91         2.47        15.68 
TCGA-30-1859 TCGA-30-1860 TCGA-30-1866 TCGA-30-1867 TCGA-30-1887 TCGA-30-1891 
       48.07        44.91        36.62         1.18        24.26        30.05 
TCGA-30-1892 TCGA-31-1950 TCGA-31-1953 TCGA-36-1581 TCGA-36-2529 TCGA-36-2543 
       48.79        18.77         6.71        24.69        35.05         2.24 
TCGA-36-2545 TCGA-36-2548 TCGA-36-2551 TCGA-42-2589 TCGA-42-2593 TCGA-57-1583 
       18.31        14.17        16.14         7.56         1.48        11.38 
TCGA-57-1586 TCGA-57-1993 TCGA-59-2348 TCGA-59-2350 TCGA-59-2351 TCGA-61-1724 
       22.32        25.05       180.16        22.32       116.12        20.94 
TCGA-61-1727 TCGA-61-1728 TCGA-61-1733 TCGA-61-1734 TCGA-61-1737 TCGA-61-1738 
       18.54        27.88        31.76        28.47        44.84        35.80 
TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 TCGA-61-1901 TCGA-61-1904 TCGA-61-1906 
        2.43        33.67        43.69        11.41         9.07        34.13 
TCGA-61-1914 TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 TCGA-61-2003 TCGA-61-2008 
       56.58        43.43        15.75        38.17         3.98        30.61 
TCGA-61-2012 TCGA-61-2016 TCGA-61-2092 TCGA-61-2094 TCGA-61-2096 TCGA-61-2098 
       30.64         1.18        51.72        71.74        58.39        65.49 
TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2110 TCGA-61-2113 TCGA-61-2614 
       55.50         6.48        76.83        44.52        22.22         8.58 

$`15Q LOSS WILD-TYPE`
TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1343 TCGA-04-1346 
       41.00         1.81        49.15         2.01        11.87        65.49 
TCGA-04-1348 TCGA-04-1349 TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 TCGA-04-1362 
       48.76        21.57        65.46        49.28        32.52        44.32 
TCGA-04-1364 TCGA-04-1365 TCGA-04-1516 TCGA-04-1530 TCGA-04-1542 TCGA-04-1638 
       33.67        76.54        41.59       119.08        84.20        55.40 
TCGA-04-1644 TCGA-04-1651 TCGA-04-1654 TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 
       48.89        36.23        47.70        57.73        17.95        35.54 
TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1672 TCGA-09-1673 
       89.33        74.89        41.59        57.57         5.85         3.02 
TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 
       97.55         6.15         6.12        35.15         4.50       112.37 
TCGA-09-2053 TCGA-09-2055 TCGA-09-2056 TCGA-10-0928 TCGA-10-0931 TCGA-10-0933 
       39.75        26.93        12.46        18.48        32.28        11.70 
TCGA-10-0934 TCGA-10-0935 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 TCGA-13-0720 
        3.88        35.41        15.12        19.86         6.21        44.55 
TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0755 TCGA-13-0761 TCGA-13-0764 
       12.39        31.07        15.19         2.47        34.06        31.04 
TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0795 TCGA-13-0797 
       21.40         8.42        38.93        36.72        19.56         8.71 
TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 TCGA-13-0804 TCGA-13-0805 TCGA-13-0886 
        7.79         8.12         8.28        35.28        35.28        74.27 
TCGA-13-0888 TCGA-13-0890 TCGA-13-0893 TCGA-13-0897 TCGA-13-0900 TCGA-13-0901 
       70.39        67.99        43.36        57.47        57.07        19.36 
TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0912 
       47.38        48.33        47.84        44.94        44.84        34.06 
TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 TCGA-13-0924 TCGA-13-1403 
       29.98        21.14        14.89        13.81         6.08        10.88 
TCGA-13-1404 TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 TCGA-13-1483 TCGA-13-1485 
        6.61         5.33        54.61        87.06        29.39        20.68 
TCGA-13-1492 TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 
       73.55        54.31        37.61        38.37        13.97        32.84 
TCGA-13-1509 TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 TCGA-13-2059 TCGA-13-2060 
        4.14         3.88         3.09        14.24        12.23         8.58 
TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 TCGA-20-0996 TCGA-20-1685 TCGA-20-1687 
        8.75         6.28        23.05        72.20        16.67         2.66 
TCGA-23-1021 TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 
       47.54        40.54        15.39        26.83        31.73        49.41 
TCGA-23-1029 TCGA-23-1111 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 TCGA-23-1120 
        8.81         3.22        33.30        86.01       129.96         4.27 
TCGA-23-1121 TCGA-23-1122 TCGA-23-1124 TCGA-23-1809 TCGA-23-2072 TCGA-23-2078 
        6.38        39.09        58.13         0.53        24.95        87.48 
TCGA-23-2079 TCGA-23-2081 TCGA-24-0966 TCGA-24-0970 TCGA-24-0975 TCGA-24-0980 
       91.66        77.00         7.63        11.64        21.80         7.66 
TCGA-24-1103 TCGA-24-1413 TCGA-24-1416 TCGA-24-1419 TCGA-24-1423 TCGA-24-1425 
       54.08         6.31         6.38         7.86         6.25         5.95 
TCGA-24-1427 TCGA-24-1435 TCGA-24-1464 TCGA-24-1467 TCGA-24-1470 TCGA-24-1474 
        4.80        43.53        12.46       105.99         3.42        22.19 
TCGA-24-1545 TCGA-24-1546 TCGA-24-1551 TCGA-24-1555 TCGA-24-1558 TCGA-24-1560 
       57.37        64.27        51.91        88.50        19.53        44.09 
TCGA-24-1562 TCGA-24-1563 TCGA-24-1565 TCGA-24-1567 TCGA-24-1604 TCGA-24-1842 
       45.50        47.70        10.26        17.23        88.34         8.32 
TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 TCGA-24-1923 TCGA-24-1930 TCGA-24-2023 
        4.37        11.28         5.75        22.65        81.11        44.84 
TCGA-24-2024 TCGA-24-2027 TCGA-24-2029 TCGA-24-2033 TCGA-24-2035 TCGA-24-2038 
       58.16       109.68        14.43        18.48        28.18        44.48 
TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2281 TCGA-24-2289 TCGA-24-2290 
        0.36        47.54        31.63        44.58        67.36        36.23 
TCGA-25-1315 TCGA-25-1317 TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1630 
       51.06         1.02        18.02        15.78         0.36         7.86 
TCGA-25-1635 TCGA-25-1870 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 
       51.22        14.93        85.05        13.02        49.05         1.02 
TCGA-25-2393 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 TCGA-25-2408 
       38.04        45.01        19.99        42.02         2.96        30.97 
TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 TCGA-29-1694 TCGA-29-1696 
       26.96        78.87        44.71        47.18        38.53        33.70 
TCGA-29-1697 TCGA-29-1701 TCGA-29-1705 TCGA-29-1768 TCGA-29-1771 TCGA-29-1775 
       31.17        16.90        18.25        31.23        22.52        12.36 
TCGA-29-1776 TCGA-29-1778 TCGA-29-1781 TCGA-29-1785 TCGA-29-2425 TCGA-29-2427 
       11.84        14.93         8.35        34.62        65.00        62.47 
TCGA-29-2431 TCGA-29-2436 TCGA-30-1853 TCGA-30-1857 TCGA-30-1861 TCGA-30-1862 
       42.25         9.76        36.26         0.26        34.78         6.08 
TCGA-30-1880 TCGA-31-1944 TCGA-31-1946 TCGA-31-1951 TCGA-31-1955 TCGA-31-1956 
       57.57        45.57        30.18        22.45        42.51        44.09 
TCGA-31-1959 TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 
        2.17        28.73        29.06        21.53        22.85        22.55 
TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 TCGA-36-2530 
        8.55        30.05        25.74        27.85        24.23        33.01 
TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 
       29.49        29.79        25.91        25.08        23.80        21.60 
TCGA-36-2544 TCGA-36-2547 TCGA-36-2549 TCGA-36-2552 TCGA-42-2582 TCGA-42-2587 
       20.98        20.52         6.05        11.47        26.04        23.74 
TCGA-42-2588 TCGA-42-2590 TCGA-42-2591 TCGA-57-1582 TCGA-57-1584 TCGA-57-1585 
        9.44         7.46        22.39        24.03        21.14         1.74 
TCGA-57-1992 TCGA-57-1994 TCGA-59-2349 TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 
       28.96        25.02        80.12         9.40        34.39         2.14 
TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 TCGA-61-1725 TCGA-61-1730 
        5.39        44.78        11.11         8.05        31.40         4.34 
TCGA-61-1736 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 TCGA-61-1903 TCGA-61-1907 
       48.79         1.41         8.42         5.79        13.02        31.30 
TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1915 TCGA-61-1995 TCGA-61-1998 
       37.02        42.48        48.92        67.73         1.97         5.52 
TCGA-61-2000 TCGA-61-2002 TCGA-61-2009 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 
       14.50        17.98        39.85        45.96        45.40         4.80 
TCGA-61-2088 TCGA-61-2095 TCGA-61-2097 TCGA-61-2109 TCGA-61-2111 TCGA-61-2612 
        4.77        61.64        60.62        20.68       125.72         6.35 
TCGA-61-2613 
       31.07 

  15Q LOSS MUTATED 15Q LOSS WILD-TYPE 
              0.30               0.26 
  15Q LOSS MUTATED 15Q LOSS WILD-TYPE 
            180.16             129.96 
  15Q LOSS MUTATED 15Q LOSS WILD-TYPE 
            28.555             26.960 
[1] "0.3 - 180.2 (28.6)" "0.3 - 130.0 (27.0)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-61-2614 
  "15Q LOSS MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-61-2614 
  "15Q LOSS MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "15Q LOSS MUTATED"   "15Q LOSS MUTATED"   "15Q LOSS MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"15Q LOSS WILD-TYPE"   "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "15Q LOSS MUTATED" "15Q LOSS WILD-TYPE" "15Q LOSS WILD-TYPE" 
        TCGA-61-2614 
  "15Q LOSS MUTATED" 
[1] "hr=" "1.2"
D67V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  15Q LOSS MUTATED         1   258                2
  15Q LOSS WILD-TYPE       1   290                0
D67V3, multiclass
                  clus
vv                 15Q LOSS MUTATED 15Q LOSS WILD-TYPE
  OMENTUM                         1                  1
  OVARY                         258                290
  PERITONEUM OVARY                2                  0
D67V4, continuous
D67V5, binary
                    cls
clus                   0   1
  15Q LOSS MUTATED     2 264
  15Q LOSS WILD-TYPE   1 295
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  15Q LOSS MUTATED      2  264
  15Q LOSS WILD-TYPE    1  295
     clus
vv    15Q LOSS MUTATED 15Q LOSS WILD-TYPE
  NO                 2                  1
  YES              264                295
                    vv
clus                 R0 R1 R2
  15Q LOSS MUTATED    4 11  1
  15Q LOSS WILD-TYPE 10 15  1
D67V6, multiclass
    clus
vv   15Q LOSS MUTATED 15Q LOSS WILD-TYPE
  R0                4                 10
  R1               11                 15
  R2                1                  1

Clustering(68) Variable = 16P LOSS MUTATION ANALYSIS
D68V1, survival
                    sevent
clus2                  0   1
  16P LOSS MUTATED   144 169
  16P LOSS WILD-TYPE 117 117
  16P LOSS MUTATED 16P LOSS WILD-TYPE 
               313                234 
  16P LOSS MUTATED 16P LOSS WILD-TYPE 
               169                117 
$`16P LOSS MUTATED`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1337 TCGA-04-1338 TCGA-04-1343 TCGA-04-1347 
       40.24        41.00         2.01        46.62        11.87        63.06 
TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 TCGA-04-1356 TCGA-04-1362 TCGA-04-1364 
       48.76        21.57        63.98        49.28        44.32        33.67 
TCGA-04-1367 TCGA-04-1516 TCGA-04-1517 TCGA-04-1530 TCGA-04-1638 TCGA-04-1644 
       71.47        41.59        19.99       119.08        55.40        48.89 
TCGA-04-1649 TCGA-04-1652 TCGA-09-0367 TCGA-09-1659 TCGA-09-1665 TCGA-09-1666 
       64.64        31.86        17.95         9.96        41.59        57.57 
TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 TCGA-09-1673 TCGA-09-1675 
       61.87        55.36        30.48        17.98         3.02        97.55 
TCGA-09-2043 TCGA-09-2044 TCGA-09-2049 TCGA-09-2053 TCGA-09-2054 TCGA-10-0925 
        6.15         6.12       112.37        39.75        20.91        54.31 
TCGA-10-0926 TCGA-10-0928 TCGA-10-0930 TCGA-10-0935 TCGA-10-0937 TCGA-10-0938 
       25.91        18.48        33.24        35.41        15.12        19.86 
TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0727 TCGA-13-0730 
        6.21        24.59        44.55        39.58        15.19        17.79 
TCGA-13-0751 TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 TCGA-13-0762 
       55.17        11.18        11.38        11.54        34.06        32.25 
TCGA-13-0764 TCGA-13-0766 TCGA-13-0791 TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 
       31.04        21.40        38.93        28.70        30.35        19.56 
TCGA-13-0801 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 
        8.28        35.28        13.61        68.91       107.18        91.40 
TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 TCGA-13-0891 TCGA-13-0893 TCGA-13-0899 
       74.27        66.64        70.39        69.01        43.36        56.15 
TCGA-13-0903 TCGA-13-0904 TCGA-13-0906 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 
       47.38        48.33        44.94        37.08        27.68        34.06 
TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 
       21.14        14.89        13.81         6.41         6.08        10.88 
TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 TCGA-13-1410 TCGA-13-1411 
        6.61         7.36         6.05         5.92         4.70         4.21 
TCGA-13-1481 TCGA-13-1484 TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 
       87.06        98.04        70.82        82.88        52.44        73.55 
TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 TCGA-13-1497 TCGA-13-1500 TCGA-13-1505 
       38.17        49.22         4.24        54.31        13.97         4.21 
TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 
        4.41         4.77         4.14         3.88         3.09        14.24 
TCGA-13-2061 TCGA-13-2065 TCGA-20-0990 TCGA-20-1683 TCGA-20-1687 TCGA-23-1022 
       10.78         8.75        25.94        25.38         2.66        42.51 
TCGA-23-1024 TCGA-23-1027 TCGA-23-1028 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 
       15.39        31.73        49.41        29.10        18.87         2.24 
TCGA-23-1109 TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 TCGA-23-1116 TCGA-23-1117 
       51.35         3.22        31.20        68.68         4.57        33.30 
TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-2072 
      129.96         4.27         6.38        39.09        33.47        24.95 
TCGA-23-2078 TCGA-23-2645 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 TCGA-24-1104 
       87.48         4.50        11.64        21.80        41.56        63.55 
TCGA-24-1105 TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 
       47.41         6.38         7.82         7.99         7.86         0.76 
TCGA-24-1426 TCGA-24-1428 TCGA-24-1431 TCGA-24-1463 TCGA-24-1466 TCGA-24-1469 
        5.36        17.36        19.17        72.92        45.14         9.11 
TCGA-24-1471 TCGA-24-1474 TCGA-24-1545 TCGA-24-1548 TCGA-24-1552 TCGA-24-1555 
        1.18        22.19        57.37        16.21        41.39        88.50 
TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1567 
       19.53        44.09        45.50        47.70        25.87        17.23 
TCGA-24-1603 TCGA-24-1843 TCGA-24-1844 TCGA-24-1846 TCGA-24-1847 TCGA-24-1850 
       90.15         3.48         3.72         4.37        11.28         5.49 
TCGA-24-1923 TCGA-24-1924 TCGA-24-1928 TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 
       22.65        30.21        11.05        81.11         4.87       151.99 
TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2035 
       44.84        58.16        34.82       109.68        14.43        28.18 
TCGA-24-2036 TCGA-24-2260 TCGA-24-2262 TCGA-24-2267 TCGA-24-2280 TCGA-24-2281 
       64.01        36.16         0.36        47.54        70.45        44.58 
TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 
        0.82        67.36        36.23        16.64        33.11        55.86 
TCGA-24-2298 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 
       53.26        26.93        31.99        51.06        37.02         1.02 
TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 
       34.98        65.00        36.95         2.99        12.00         2.96 
TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 TCGA-25-1631 TCGA-25-1632 TCGA-25-1635 
       15.78         0.36        20.58         0.30        56.94        51.22 
TCGA-25-1870 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 TCGA-25-2396 
       14.93        13.02        49.05         1.02        38.04         3.02 
TCGA-25-2397 TCGA-25-2398 TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 TCGA-25-2409 
       12.00        45.01        42.02         2.96        29.00        26.96 
TCGA-29-1688 TCGA-29-1693 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 
       78.87       101.75        31.17        68.28         0.53        16.90 
TCGA-29-1703 TCGA-29-1705 TCGA-29-1761 TCGA-29-1762 TCGA-29-1764 TCGA-29-1766 
       59.67        18.25        17.00        85.68        62.93        39.09 
TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 TCGA-29-1775 TCGA-29-1777 TCGA-29-1781 
       22.98        24.36        22.52        12.36        12.30         8.35 
TCGA-29-1783 TCGA-29-1785 TCGA-29-2428 TCGA-29-2431 TCGA-29-2434 TCGA-30-1714 
        7.20        34.62        45.11        42.25        11.47        38.07 
TCGA-30-1718 TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1860 
       51.91        36.26         2.47        15.68         0.26        44.91 
TCGA-30-1861 TCGA-30-1866 TCGA-30-1867 TCGA-30-1887 TCGA-31-1944 TCGA-31-1950 
       34.78        36.62         1.18        24.26        45.57        18.77 
TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 
       22.45         6.71        42.51        28.73        29.06        21.53 
TCGA-36-1571 TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 TCGA-36-2532 
       22.85         8.55        30.05        25.74        27.85        29.49 
TCGA-36-2534 TCGA-36-2543 TCGA-36-2548 TCGA-36-2551 TCGA-42-2589 TCGA-42-2590 
       29.79         2.24        14.17        16.14         7.56         7.46 
TCGA-42-2593 TCGA-57-1582 TCGA-57-1584 TCGA-57-1992 TCGA-57-1993 TCGA-59-2350 
        1.48        24.03        21.14        28.96        25.05        22.32 
TCGA-59-2352 TCGA-59-2355 TCGA-59-2363 TCGA-61-1722 TCGA-61-1725 TCGA-61-1730 
        9.40         2.14         5.39         8.05        31.40         4.34 
TCGA-61-1736 TCGA-61-1737 TCGA-61-1741 TCGA-61-1895 TCGA-61-1899 TCGA-61-1904 
       48.79        44.84        33.67         1.41         8.42         9.07 
TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 TCGA-61-1914 TCGA-61-1919 TCGA-61-1995 
       34.13        31.30        37.02        56.58        38.17         1.97 
TCGA-61-1998 TCGA-61-2003 TCGA-61-2008 TCGA-61-2012 TCGA-61-2088 TCGA-61-2094 
        5.52         3.98        30.61        30.64         4.77        71.74 
TCGA-61-2097 TCGA-61-2098 TCGA-61-2102 TCGA-61-2109 TCGA-61-2113 TCGA-61-2613 
       60.62        65.49         6.48        20.68        22.22        31.07 
TCGA-61-2614 
        8.58 

$`16P LOSS WILD-TYPE`
TCGA-04-1335 TCGA-04-1336 TCGA-04-1342 TCGA-04-1346 TCGA-04-1351 TCGA-04-1361 
        1.81        49.15        18.51        65.49        65.46        32.52 
TCGA-04-1365 TCGA-04-1371 TCGA-04-1514 TCGA-04-1525 TCGA-04-1536 TCGA-04-1542 
       76.54        82.36        56.55        38.37        29.06        84.20 
TCGA-04-1646 TCGA-04-1648 TCGA-04-1651 TCGA-04-1654 TCGA-04-1655 TCGA-09-0364 
       27.88        28.64        36.23        47.70        45.34        29.16 
TCGA-09-0365 TCGA-09-0366 TCGA-09-0369 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 
        9.47        57.73        35.54        38.43        89.33        74.89 
TCGA-09-1672 TCGA-09-1674 TCGA-09-2045 TCGA-09-2048 TCGA-09-2050 TCGA-09-2051 
        5.85         8.55        35.15         4.50        71.11        63.09 
TCGA-09-2055 TCGA-09-2056 TCGA-10-0927 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 
       26.93        12.46        81.47        32.28        11.70         3.88 
TCGA-10-0936 TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 TCGA-13-0755 TCGA-13-0768 
       35.80         2.73        12.39        31.07         2.47         8.42 
TCGA-13-0792 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 TCGA-13-0802 TCGA-13-0803 
       36.72         8.71         7.79         8.12         8.19        43.82 
TCGA-13-0804 TCGA-13-0889 TCGA-13-0890 TCGA-13-0897 TCGA-13-0900 TCGA-13-0901 
       35.28        61.81        67.99        57.47        57.07        19.36 
TCGA-13-0905 TCGA-13-0908 TCGA-13-0913 TCGA-13-0921 TCGA-13-1409 TCGA-13-1412 
       47.84        44.84        29.98         4.64         6.84         5.33 
TCGA-13-1477 TCGA-13-1482 TCGA-13-1483 TCGA-13-1485 TCGA-13-1487 TCGA-13-1498 
       54.61        61.71        29.39        20.68        22.39        37.61 
TCGA-13-1499 TCGA-13-1501 TCGA-13-1504 TCGA-13-1510 TCGA-13-2059 TCGA-13-2060 
       38.37        32.84        16.57         2.56        12.23         8.58 
TCGA-13-2071 TCGA-20-0987 TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 TCGA-20-1684 
        6.28        23.05        26.20        72.20        27.48        19.07 
TCGA-20-1685 TCGA-20-1686 TCGA-23-1021 TCGA-23-1023 TCGA-23-1026 TCGA-23-1029 
       16.67         2.93        47.54        40.54        26.83         8.81 
TCGA-23-1110 TCGA-23-1118 TCGA-23-1124 TCGA-23-1809 TCGA-23-2077 TCGA-23-2079 
       54.51        86.01        58.13         0.53       115.89        91.66 
TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 TCGA-24-0966 TCGA-24-0968 
       77.00        49.84         2.76         4.70         7.63        19.63 
TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1413 TCGA-24-1423 TCGA-24-1424 
        7.66        22.32        54.08         6.31         6.25         6.02 
TCGA-24-1425 TCGA-24-1427 TCGA-24-1430 TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 
        5.95         4.80        28.34        18.67        43.53         8.55 
TCGA-24-1464 TCGA-24-1467 TCGA-24-1470 TCGA-24-1544 TCGA-24-1546 TCGA-24-1549 
       12.46       105.99         3.42        26.96        64.27        56.58 
TCGA-24-1550 TCGA-24-1551 TCGA-24-1553 TCGA-24-1556 TCGA-24-1557 TCGA-24-1565 
       41.06        51.91        58.09        70.62        39.88        10.26 
TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 TCGA-24-1845 TCGA-24-1849 
       88.34        48.33        38.24         8.32         3.81         5.75 
TCGA-24-1920 TCGA-24-1927 TCGA-24-2030 TCGA-24-2033 TCGA-24-2038 TCGA-24-2254 
        9.80        16.41        53.95        18.48        44.48        57.07 
TCGA-24-2261 TCGA-24-2271 TCGA-25-1312 TCGA-25-1321 TCGA-25-1623 TCGA-25-1625 
        0.79        31.63         1.02        33.96        18.58        18.02 
TCGA-25-1630 TCGA-25-1633 TCGA-25-1634 TCGA-25-1871 TCGA-25-1877 TCGA-25-1878 
        7.86        60.59        35.54        24.99        18.05        85.05 
TCGA-25-2399 TCGA-25-2408 TCGA-29-1690 TCGA-29-1691 TCGA-29-1694 TCGA-29-1695 
       19.99        30.97        44.71        47.18        38.53         0.79 
TCGA-29-1696 TCGA-29-1702 TCGA-29-1707 TCGA-29-1710 TCGA-29-1711 TCGA-29-1763 
       33.70        18.64        41.95        29.23        34.62        66.77 
TCGA-29-1768 TCGA-29-1774 TCGA-29-1776 TCGA-29-1778 TCGA-29-1784 TCGA-29-2414 
       31.23        17.29        11.84        14.93         5.36        86.17 
TCGA-29-2425 TCGA-29-2427 TCGA-29-2429 TCGA-29-2432 TCGA-29-2436 TCGA-30-1859 
       65.00        62.47         4.87        11.84         9.76        48.07 
TCGA-30-1862 TCGA-30-1880 TCGA-30-1891 TCGA-30-1892 TCGA-31-1946 TCGA-31-1956 
        6.08        57.57        30.05        48.79        30.18        44.09 
TCGA-31-1959 TCGA-36-1574 TCGA-36-1580 TCGA-36-1581 TCGA-36-2529 TCGA-36-2530 
        2.17        22.55        24.23        24.69        35.05        33.01 
TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2544 TCGA-36-2545 
       25.91        25.08        23.80        21.60        20.98        18.31 
TCGA-36-2547 TCGA-36-2549 TCGA-36-2552 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 
       20.52         6.05        11.47        26.04        23.74         9.44 
TCGA-42-2591 TCGA-57-1583 TCGA-57-1585 TCGA-57-1586 TCGA-57-1994 TCGA-59-2348 
       22.39        11.38         1.74        22.32        25.02       180.16 
TCGA-59-2349 TCGA-59-2351 TCGA-59-2354 TCGA-59-2372 TCGA-61-1721 TCGA-61-1724 
       80.12       116.12        34.39        44.78        11.11        20.94 
TCGA-61-1727 TCGA-61-1728 TCGA-61-1733 TCGA-61-1734 TCGA-61-1738 TCGA-61-1740 
       18.54        27.88        31.76        28.47        35.80         2.43 
TCGA-61-1743 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1911 TCGA-61-1913 
       43.69         5.79        11.41        13.02        42.48        48.92 
TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-2000 TCGA-61-2002 TCGA-61-2009 
       67.73        43.43        15.75        14.50        17.98        39.85 
TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2092 TCGA-61-2095 
        1.18        45.96        45.40         4.80        51.72        61.64 
TCGA-61-2096 TCGA-61-2101 TCGA-61-2104 TCGA-61-2110 TCGA-61-2111 TCGA-61-2612 
       58.39        55.50        76.83        44.52       125.72         6.35 

  16P LOSS MUTATED 16P LOSS WILD-TYPE 
              0.26               0.53 
  16P LOSS MUTATED 16P LOSS WILD-TYPE 
            151.99             180.16 
  16P LOSS MUTATED 16P LOSS WILD-TYPE 
            27.680             28.555 
[1] "0.3 - 152.0 (27.7)" "0.5 - 180.2 (28.6)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-61-2614 
  "16P LOSS MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-61-2614 
  "16P LOSS MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "16P LOSS MUTATED"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "16P LOSS MUTATED"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED"   "16P LOSS MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"16P LOSS WILD-TYPE"   "16P LOSS MUTATED" "16P LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE" "16P LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "16P LOSS MUTATED" "16P LOSS WILD-TYPE"   "16P LOSS MUTATED" 
        TCGA-61-2614 
  "16P LOSS MUTATED" 
[1] "hr=" "1.2"
D68V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  16P LOSS MUTATED         2   312                1
  16P LOSS WILD-TYPE       0   236                1
D68V3, multiclass
                  clus
vv                 16P LOSS MUTATED 16P LOSS WILD-TYPE
  OMENTUM                         2                  0
  OVARY                         312                236
  PERITONEUM OVARY                1                  1
D68V4, continuous
D68V5, binary
                    cls
clus                   0   1
  16P LOSS MUTATED     3 320
  16P LOSS WILD-TYPE   0 239
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  16P LOSS MUTATED      3  320
  16P LOSS WILD-TYPE    0  239
     clus
vv    16P LOSS MUTATED 16P LOSS WILD-TYPE
  NO                 3                  0
  YES              320                239
                    vv
clus                 R0 R1 R2
  16P LOSS MUTATED    7 11  1
  16P LOSS WILD-TYPE  7 15  1
D68V6, multiclass
    clus
vv   16P LOSS MUTATED 16P LOSS WILD-TYPE
  R0                7                  7
  R1               11                 15
  R2                1                  1

Clustering(69) Variable = 16Q LOSS MUTATION ANALYSIS
D69V1, survival
                    sevent
clus2                  0   1
  16Q LOSS MUTATED   178 211
  16Q LOSS WILD-TYPE  83  75
  16Q LOSS MUTATED 16Q LOSS WILD-TYPE 
               389                158 
  16Q LOSS MUTATED 16Q LOSS WILD-TYPE 
               211                 75 
$`16Q LOSS MUTATED`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 TCGA-04-1342 
       40.24        41.00        49.15         2.01        46.62        18.51 
TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 
       11.87        65.49        63.06        48.76        21.57        63.98 
TCGA-04-1356 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 
       49.28        44.32        33.67        76.54        71.47        82.36 
TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 TCGA-04-1530 TCGA-04-1638 TCGA-04-1644 
       41.59        19.99        38.37       119.08        55.40        48.89 
TCGA-04-1649 TCGA-04-1652 TCGA-04-1654 TCGA-04-1655 TCGA-09-0366 TCGA-09-0367 
       64.64        31.86        47.70        45.34        57.73        17.95 
TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1665 TCGA-09-1666 TCGA-09-1667 
        9.96        38.43        89.33        41.59        57.57        61.87 
TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 
       55.36        30.48        17.98         8.55        97.55         6.15 
TCGA-09-2044 TCGA-09-2048 TCGA-09-2049 TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 
        6.12         4.50       112.37        63.09        39.75        20.91 
TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 
       54.31        25.91        81.47        18.48        33.24        32.28 
TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 
       35.41        35.80        15.12        19.86         6.21        24.59 
TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 
       44.55        39.58         2.73        31.07        15.19        17.79 
TCGA-13-0751 TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 
       55.17         2.47        11.18        11.38        11.54        34.06 
TCGA-13-0762 TCGA-13-0764 TCGA-13-0766 TCGA-13-0791 TCGA-13-0793 TCGA-13-0794 
       32.25        31.04        21.40        38.93        28.70        30.35 
TCGA-13-0795 TCGA-13-0797 TCGA-13-0801 TCGA-13-0802 TCGA-13-0804 TCGA-13-0805 
       19.56         8.71         8.28         8.19        35.28        35.28 
TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 
       13.61        68.91       107.18        91.40        74.27        66.64 
TCGA-13-0888 TCGA-13-0889 TCGA-13-0891 TCGA-13-0893 TCGA-13-0899 TCGA-13-0903 
       70.39        61.81        69.01        43.36        56.15        47.38 
TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0916 
       44.94        44.84        37.08        27.68        34.06        21.14 
TCGA-13-0919 TCGA-13-0920 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 
       14.89        13.81         6.41         6.08        10.88         6.61 
TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 TCGA-13-1410 TCGA-13-1411 TCGA-13-1481 
        7.36         6.05         5.92         4.70         4.21        87.06 
TCGA-13-1483 TCGA-13-1484 TCGA-13-1487 TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 
       29.39        98.04        22.39        70.82        82.88        52.44 
TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 
       73.55        38.17        49.22         4.24        54.31        37.61 
TCGA-13-1499 TCGA-13-1500 TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 
       38.37        13.97         4.21         4.41         4.77         4.14 
TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 
        3.88         3.09        14.24         8.58        10.78         8.75 
TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-1682 TCGA-20-1683 TCGA-20-1685 
       23.05        25.94        26.20        27.48        25.38        16.67 
TCGA-20-1686 TCGA-20-1687 TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 TCGA-23-1027 
        2.93         2.66        42.51        40.54        15.39        31.73 
TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 
       49.41         8.81        29.10        18.87         2.24        51.35 
TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 
        3.22        31.20        68.68         4.57        33.30        86.01 
TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-2072 
      129.96         4.27         6.38        39.09        33.47        24.95 
TCGA-23-2078 TCGA-23-2081 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 
       87.48        77.00         2.76         4.70         4.50         7.63 
TCGA-24-0970 TCGA-24-0979 TCGA-24-0982 TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 
       11.64        41.56        22.32        63.55        47.41         6.31 
TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1425 
        6.38         7.82         7.99         7.86         0.76         5.95 
TCGA-24-1426 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 
        5.36        17.36        28.34        19.17        18.67        43.53 
TCGA-24-1463 TCGA-24-1466 TCGA-24-1469 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 
       72.92        45.14         9.11         1.18        22.19        26.96 
TCGA-24-1545 TCGA-24-1548 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1555 
       57.37        16.21        41.06        51.91        41.39        88.50 
TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 
       19.53        44.09        45.50        47.70        25.87        10.26 
TCGA-24-1567 TCGA-24-1603 TCGA-24-1843 TCGA-24-1844 TCGA-24-1846 TCGA-24-1847 
       17.23        90.15         3.48         3.72         4.37        11.28 
TCGA-24-1850 TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 TCGA-24-1930 
        5.49        22.65        30.21        16.41        11.05        81.11 
TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2029 
        4.87       151.99        44.84        58.16        34.82        14.43 
TCGA-24-2030 TCGA-24-2035 TCGA-24-2036 TCGA-24-2260 TCGA-24-2261 TCGA-24-2262 
       53.95        28.18        64.01        36.16         0.79         0.36 
TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 
       47.54        31.63        70.45        44.58         0.82        67.36 
TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 TCGA-24-2298 TCGA-25-1312 TCGA-25-1313 
       16.64        33.11        55.86        53.26         1.02        26.93 
TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 
       31.99        51.06        37.02         1.02        34.98        65.00 
TCGA-25-1320 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 TCGA-25-1626 TCGA-25-1627 
       36.95         2.99        12.00         2.96        15.78         0.36 
TCGA-25-1628 TCGA-25-1631 TCGA-25-1632 TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 
       20.58         0.30        56.94        51.22        14.93        24.99 
TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 
       18.05        85.05        13.02        49.05         1.02        38.04 
TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 
        3.02        12.00        45.01        19.99        42.02         2.96 
TCGA-25-2404 TCGA-25-2409 TCGA-29-1691 TCGA-29-1693 TCGA-29-1696 TCGA-29-1697 
       29.00        26.96        47.18       101.75        33.70        31.17 
TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 
       68.28         0.53        16.90        18.64        59.67        18.25 
TCGA-29-1761 TCGA-29-1762 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 
       17.00        85.68        62.93        39.09        31.23        22.98 
TCGA-29-1770 TCGA-29-1771 TCGA-29-1775 TCGA-29-1777 TCGA-29-1781 TCGA-29-1783 
       24.36        22.52        12.36        12.30         8.35         7.20 
TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 TCGA-29-2428 TCGA-29-2431 TCGA-29-2432 
        5.36        34.62        86.17        45.11        42.25        11.84 
TCGA-29-2434 TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 
       11.47        38.07        51.91        36.26         2.47        15.68 
TCGA-30-1857 TCGA-30-1860 TCGA-30-1861 TCGA-30-1866 TCGA-30-1867 TCGA-30-1887 
        0.26        44.91        34.78        36.62         1.18        24.26 
TCGA-30-1892 TCGA-31-1944 TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 TCGA-36-1568 
       48.79        45.57        18.77        22.45         6.71        28.73 
TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 
       29.06        21.53        22.85         8.55        30.05        25.74 
TCGA-36-1578 TCGA-36-1580 TCGA-36-2529 TCGA-36-2532 TCGA-36-2534 TCGA-36-2542 
       27.85        24.23        35.05        29.49        29.79        21.60 
TCGA-36-2543 TCGA-36-2548 TCGA-36-2551 TCGA-36-2552 TCGA-42-2589 TCGA-42-2590 
        2.24        14.17        16.14        11.47         7.56         7.46 
TCGA-42-2593 TCGA-57-1582 TCGA-57-1584 TCGA-57-1992 TCGA-57-1993 TCGA-57-1994 
        1.48        24.03        21.14        28.96        25.05        25.02 
TCGA-59-2350 TCGA-59-2352 TCGA-59-2355 TCGA-59-2363 TCGA-61-1722 TCGA-61-1725 
       22.32         9.40         2.14         5.39         8.05        31.40 
TCGA-61-1727 TCGA-61-1730 TCGA-61-1733 TCGA-61-1736 TCGA-61-1737 TCGA-61-1741 
       18.54         4.34        31.76        48.79        44.84        33.67 
TCGA-61-1743 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 TCGA-61-1904 TCGA-61-1906 
       43.69         1.41         8.42         5.79         9.07        34.13 
TCGA-61-1907 TCGA-61-1910 TCGA-61-1913 TCGA-61-1914 TCGA-61-1919 TCGA-61-1995 
       31.30        37.02        48.92        56.58        38.17         1.97 
TCGA-61-1998 TCGA-61-2003 TCGA-61-2008 TCGA-61-2012 TCGA-61-2087 TCGA-61-2088 
        5.52         3.98        30.61        30.64         4.80         4.77 
TCGA-61-2094 TCGA-61-2097 TCGA-61-2098 TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 
       71.74        60.62        65.49         6.48        76.83        20.68 
TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
      125.72        22.22         6.35        31.07         8.58 

$`16Q LOSS WILD-TYPE`
TCGA-04-1335 TCGA-04-1351 TCGA-04-1361 TCGA-04-1514 TCGA-04-1536 TCGA-04-1542 
        1.81        65.46        32.52        56.55        29.06        84.20 
TCGA-04-1646 TCGA-04-1648 TCGA-04-1651 TCGA-09-0364 TCGA-09-0365 TCGA-09-0369 
       27.88        28.64        36.23        29.16         9.47        35.54 
TCGA-09-1664 TCGA-09-1672 TCGA-09-1673 TCGA-09-2045 TCGA-09-2050 TCGA-09-2055 
       74.89         5.85         3.02        35.15        71.11        26.93 
TCGA-09-2056 TCGA-10-0933 TCGA-10-0934 TCGA-13-0725 TCGA-13-0768 TCGA-13-0792 
       12.46        11.70         3.88        12.39         8.42        36.72 
TCGA-13-0799 TCGA-13-0800 TCGA-13-0803 TCGA-13-0890 TCGA-13-0897 TCGA-13-0900 
        7.79         8.12        43.82        67.99        57.47        57.07 
TCGA-13-0901 TCGA-13-0904 TCGA-13-0905 TCGA-13-0913 TCGA-13-0921 TCGA-13-1409 
       19.36        48.33        47.84        29.98         4.64         6.84 
TCGA-13-1412 TCGA-13-1477 TCGA-13-1482 TCGA-13-1485 TCGA-13-1501 TCGA-13-1504 
        5.33        54.61        61.71        20.68        32.84        16.57 
TCGA-13-1510 TCGA-13-2059 TCGA-13-2071 TCGA-20-0996 TCGA-20-1684 TCGA-23-1021 
        2.56        12.23         6.28        72.20        19.07        47.54 
TCGA-23-1026 TCGA-23-1110 TCGA-23-1124 TCGA-23-1809 TCGA-23-2077 TCGA-23-2079 
       26.83        54.51        58.13         0.53       115.89        91.66 
TCGA-23-2084 TCGA-24-0968 TCGA-24-0975 TCGA-24-0980 TCGA-24-1103 TCGA-24-1423 
       49.84        19.63        21.80         7.66        54.08         6.25 
TCGA-24-1424 TCGA-24-1427 TCGA-24-1436 TCGA-24-1464 TCGA-24-1467 TCGA-24-1470 
        6.02         4.80         8.55        12.46       105.99         3.42 
TCGA-24-1546 TCGA-24-1549 TCGA-24-1553 TCGA-24-1556 TCGA-24-1557 TCGA-24-1604 
       64.27        56.58        58.09        70.62        39.88        88.34 
TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 TCGA-24-1845 TCGA-24-1849 TCGA-24-1920 
       48.33        38.24         8.32         3.81         5.75         9.80 
TCGA-24-2027 TCGA-24-2033 TCGA-24-2038 TCGA-24-2254 TCGA-24-2290 TCGA-25-1321 
      109.68        18.48        44.48        57.07        36.23        33.96 
TCGA-25-1623 TCGA-25-1625 TCGA-25-1630 TCGA-25-1633 TCGA-25-1634 TCGA-25-2408 
       18.58        18.02         7.86        60.59        35.54        30.97 
TCGA-29-1688 TCGA-29-1690 TCGA-29-1694 TCGA-29-1695 TCGA-29-1707 TCGA-29-1710 
       78.87        44.71        38.53         0.79        41.95        29.23 
TCGA-29-1711 TCGA-29-1763 TCGA-29-1774 TCGA-29-1776 TCGA-29-1778 TCGA-29-2425 
       34.62        66.77        17.29        11.84        14.93        65.00 
TCGA-29-2427 TCGA-29-2429 TCGA-29-2436 TCGA-30-1859 TCGA-30-1862 TCGA-30-1880 
       62.47         4.87         9.76        48.07         6.08        57.57 
TCGA-30-1891 TCGA-31-1946 TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1574 
       30.05        30.18        42.51        44.09         2.17        22.55 
TCGA-36-1581 TCGA-36-2530 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2544 
       24.69        33.01        25.91        25.08        23.80        20.98 
TCGA-36-2545 TCGA-36-2547 TCGA-36-2549 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 
       18.31        20.52         6.05        26.04        23.74         9.44 
TCGA-42-2591 TCGA-57-1583 TCGA-57-1585 TCGA-57-1586 TCGA-59-2348 TCGA-59-2349 
       22.39        11.38         1.74        22.32       180.16        80.12 
TCGA-59-2351 TCGA-59-2354 TCGA-59-2372 TCGA-61-1721 TCGA-61-1724 TCGA-61-1728 
      116.12        34.39        44.78        11.11        20.94        27.88 
TCGA-61-1734 TCGA-61-1738 TCGA-61-1740 TCGA-61-1901 TCGA-61-1903 TCGA-61-1911 
       28.47        35.80         2.43        11.41        13.02        42.48 
TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-2000 TCGA-61-2002 TCGA-61-2009 
       67.73        43.43        15.75        14.50        17.98        39.85 
TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2092 TCGA-61-2095 TCGA-61-2096 
        1.18        45.96        45.40        51.72        61.64        58.39 
TCGA-61-2101 TCGA-61-2110 
       55.50        44.52 

  16Q LOSS MUTATED 16Q LOSS WILD-TYPE 
              0.26               0.53 
  16Q LOSS MUTATED 16Q LOSS WILD-TYPE 
            151.99             180.16 
  16Q LOSS MUTATED 16Q LOSS WILD-TYPE 
             27.48              29.11 
[1] "0.3 - 152.0 (27.5)" "0.5 - 180.2 (29.1)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-2614 
  "16Q LOSS MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-2614 
  "16Q LOSS MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" "16Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "16Q LOSS MUTATED" "16Q LOSS WILD-TYPE"   "16Q LOSS MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "16Q LOSS MUTATED"   "16Q LOSS MUTATED"   "16Q LOSS MUTATED" 
        TCGA-61-2614 
  "16Q LOSS MUTATED" 
[1] "hr=" "1.3"
D69V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  16Q LOSS MUTATED         1   388                2
  16Q LOSS WILD-TYPE       1   160                0
D69V3, multiclass
                  clus
vv                 16Q LOSS MUTATED 16Q LOSS WILD-TYPE
  OMENTUM                         1                  1
  OVARY                         388                160
  PERITONEUM OVARY                2                  0
D69V4, continuous
D69V5, binary
                    cls
clus                   0   1
  16Q LOSS MUTATED     3 397
  16Q LOSS WILD-TYPE   0 162
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  16Q LOSS MUTATED      3  397
  16Q LOSS WILD-TYPE    0  162
     clus
vv    16Q LOSS MUTATED 16Q LOSS WILD-TYPE
  NO                 3                  0
  YES              397                162
                    vv
clus                 R0 R1 R2
  16Q LOSS MUTATED    8 16  1
  16Q LOSS WILD-TYPE  6 10  1
D69V6, multiclass
    clus
vv   16Q LOSS MUTATED 16Q LOSS WILD-TYPE
  R0                8                  6
  R1               16                 10
  R2                1                  1

Clustering(70) Variable = 17P LOSS MUTATION ANALYSIS
D70V1, survival
                    sevent
clus2                  0   1
  17P LOSS MUTATED   212 241
  17P LOSS WILD-TYPE  49  45
  17P LOSS MUTATED 17P LOSS WILD-TYPE 
               453                 94 
  17P LOSS MUTATED 17P LOSS WILD-TYPE 
               241                 45 
$`17P LOSS MUTATED`
TCGA-04-1331 TCGA-04-1335 TCGA-04-1336 TCGA-04-1338 TCGA-04-1343 TCGA-04-1347 
       40.24         1.81        49.15        46.62        11.87        63.06 
TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 TCGA-04-1351 TCGA-04-1361 TCGA-04-1362 
       48.76        21.57        63.98        65.46        32.52        44.32 
TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 TCGA-04-1517 
       33.67        76.54        71.47        82.36        56.55        19.99 
TCGA-04-1525 TCGA-04-1530 TCGA-04-1536 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 
       38.37       119.08        29.06        84.20        55.40        48.89 
TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 
       27.88        28.64        64.64        36.23        31.86        47.70 
TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 
       45.34        29.16         9.47        57.73        17.95        35.54 
TCGA-09-1659 TCGA-09-1662 TCGA-09-1664 TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 
        9.96        89.33        74.89        57.57        61.87        55.36 
TCGA-09-1669 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 TCGA-09-1675 TCGA-09-2044 
       30.48        17.98         5.85         3.02        97.55         6.12 
TCGA-09-2045 TCGA-09-2049 TCGA-09-2050 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 
       35.15       112.37        71.11        39.75        20.91        26.93 
TCGA-10-0926 TCGA-10-0927 TCGA-10-0930 TCGA-10-0933 TCGA-10-0936 TCGA-10-0937 
       25.91        81.47        33.24        11.70        35.80        15.12 
TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 
       19.86         6.21        24.59        44.55        39.58         2.73 
TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0755 TCGA-13-0757 
       12.39        31.07        15.19        17.79         2.47        11.18 
TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 
       11.38        11.54        34.06        21.40         8.42        38.93 
TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 
       36.72        28.70        30.35        19.56         8.71         7.79 
TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 
        8.28         8.19        43.82        35.28        35.28        13.61 
TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 
       68.91       107.18        91.40        74.27        66.64        70.39 
TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 TCGA-13-0900 TCGA-13-0901 
       61.81        67.99        69.01        43.36        57.07        19.36 
TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 
       47.38        48.33        47.84        44.84        37.08        27.68 
TCGA-13-0912 TCGA-13-0916 TCGA-13-0919 TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 
       34.06        21.14        14.89         4.64         6.41         6.08 
TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 
       10.88         6.61         7.36         6.05         5.92         6.84 
TCGA-13-1410 TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1487 
        4.70        87.06        61.71        29.39        98.04        22.39 
TCGA-13-1488 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 
       70.82        82.88        52.44        73.55        38.17        49.22 
TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 
        4.24        54.31        37.61        38.37        13.97        32.84 
TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 
       16.57         4.21         4.41         4.14         2.56         3.88 
TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 
       10.78         8.75         6.28        23.05        25.94        26.20 
TCGA-20-1682 TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 
       27.48        19.07        16.67         2.93         2.66        47.54 
TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 
       40.54        15.39        26.83        31.73        49.41         8.81 
TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 
       29.10        18.87         2.24        51.35        54.51         3.22 
TCGA-23-1113 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 TCGA-23-1120 
       31.20         4.57        33.30        86.01       129.96         4.27 
TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-2072 TCGA-23-2077 
        6.38        39.09        33.47        58.13        24.95       115.89 
TCGA-23-2078 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 
       87.48        77.00        49.84         2.76         4.70         4.50 
TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 TCGA-24-0979 TCGA-24-0980 
        7.63        19.63        11.64        21.80        41.56         7.66 
TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 
       22.32        54.08        63.55        47.41         6.31         6.38 
TCGA-24-1417 TCGA-24-1418 TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 
        7.82         7.99         0.76         6.25         6.02         5.95 
TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 
        5.36         4.80        17.36        28.34        19.17        18.67 
TCGA-24-1435 TCGA-24-1463 TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 TCGA-24-1469 
       43.53        72.92        12.46        45.14       105.99         9.11 
TCGA-24-1470 TCGA-24-1471 TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 
        3.42         1.18        26.96        57.37        64.27        16.21 
TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1555 TCGA-24-1557 
       56.58        41.06        51.91        41.39        88.50        39.88 
TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1567 
       19.53        44.09        45.50        47.70        25.87        17.23 
TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 
       90.15        88.34        48.33        38.24         8.32         3.48 
TCGA-24-1844 TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 
        3.72         3.81         4.37        11.28         5.75         5.49 
TCGA-24-1920 TCGA-24-1923 TCGA-24-1927 TCGA-24-1928 TCGA-24-1930 TCGA-24-2019 
        9.80        22.65        16.41        11.05        81.11         4.87 
TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 
      151.99        44.84        58.16        34.82       109.68        14.43 
TCGA-24-2030 TCGA-24-2033 TCGA-24-2036 TCGA-24-2261 TCGA-24-2267 TCGA-24-2271 
       53.95        18.48        64.01         0.79        47.54        31.63 
TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 
       70.45        44.58         0.82        36.23        16.64        33.11 
TCGA-24-2297 TCGA-24-2298 TCGA-25-1312 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 
       55.86        53.26         1.02        31.99        51.06        37.02 
TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 
        1.02        34.98        65.00        36.95        33.96         2.99 
TCGA-25-1323 TCGA-25-1329 TCGA-25-1625 TCGA-25-1627 TCGA-25-1628 TCGA-25-1630 
       12.00         2.96        18.02         0.36        20.58         7.86 
TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 
        0.30        56.94        60.59        35.54        51.22        14.93 
TCGA-25-1871 TCGA-25-1877 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 
       24.99        18.05        13.02        49.05         1.02        38.04 
TCGA-25-2396 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 
        3.02        45.01        19.99        42.02         2.96        29.00 
TCGA-25-2409 TCGA-29-1688 TCGA-29-1691 TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 
       26.96        78.87        47.18       101.75        38.53         0.79 
TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 TCGA-29-1703 
       33.70        31.17        68.28         0.53        16.90        59.67 
TCGA-29-1705 TCGA-29-1707 TCGA-29-1711 TCGA-29-1761 TCGA-29-1762 TCGA-29-1764 
       18.25        41.95        34.62        17.00        85.68        62.93 
TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 TCGA-29-1775 TCGA-29-1776 
       31.23        22.98        24.36        22.52        12.36        11.84 
TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 
       12.30        14.93         8.35         7.20         5.36        34.62 
TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 TCGA-29-2431 TCGA-29-2432 
       86.17        65.00        62.47        45.11        42.25        11.84 
TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 
       38.07        51.91        36.26         2.47        15.68         0.26 
TCGA-30-1859 TCGA-30-1860 TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 
       48.07        44.91        34.78         6.08        36.62         1.18 
TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 
       57.57        24.26        30.05        48.79        45.57        30.18 
TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 
       18.77        22.45         6.71        42.51        44.09         2.17 
TCGA-36-1568 TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 
       28.73        21.53        22.85        22.55         8.55        30.05 
TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 
       35.05        33.01        29.49        29.79        25.91        25.08 
TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 TCGA-36-2548 
       21.60         2.24        20.98        18.31        20.52        14.17 
TCGA-36-2549 TCGA-42-2582 TCGA-42-2587 TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 
        6.05        26.04        23.74         7.56         7.46        22.39 
TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 TCGA-57-1585 TCGA-57-1993 
        1.48        24.03        11.38        21.14         1.74        25.05 
TCGA-59-2348 TCGA-59-2350 TCGA-59-2351 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 
      180.16        22.32       116.12        34.39         2.14         5.39 
TCGA-59-2372 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 TCGA-61-1730 
       44.78        20.94        31.40        18.54        27.88         4.34 
TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 
       31.76        28.47        48.79        44.84        35.80         2.43 
TCGA-61-1741 TCGA-61-1743 TCGA-61-1895 TCGA-61-1899 TCGA-61-1901 TCGA-61-1903 
       33.67        43.69         1.41         8.42        11.41        13.02 
TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 
       34.13        31.30        37.02        48.92        56.58        67.73 
TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 
       43.43        15.75        38.17         1.97         5.52        14.50 
TCGA-61-2002 TCGA-61-2003 TCGA-61-2008 TCGA-61-2012 TCGA-61-2016 TCGA-61-2087 
       17.98         3.98        30.61        30.64         1.18         4.80 
TCGA-61-2088 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 
        4.77        71.74        61.64        58.39        60.62        65.49 
TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 
       55.50         6.48        76.83        20.68        44.52       125.72 
TCGA-61-2113 TCGA-61-2613 TCGA-61-2614 
       22.22        31.07         8.58 

$`17P LOSS WILD-TYPE`
TCGA-04-1332 TCGA-04-1337 TCGA-04-1342 TCGA-04-1346 TCGA-04-1356 TCGA-04-1516 
       41.00         2.01        18.51        65.49        49.28        41.59 
TCGA-09-1661 TCGA-09-1665 TCGA-09-1674 TCGA-09-2043 TCGA-09-2048 TCGA-09-2051 
       38.43        41.59         8.55         6.15         4.50        63.09 
TCGA-09-2056 TCGA-10-0925 TCGA-10-0928 TCGA-10-0931 TCGA-10-0934 TCGA-10-0935 
       12.46        54.31        18.48        32.28         3.88        35.41 
TCGA-13-0751 TCGA-13-0762 TCGA-13-0764 TCGA-13-0800 TCGA-13-0897 TCGA-13-0899 
       55.17        32.25        31.04         8.12        57.47        56.15 
TCGA-13-0906 TCGA-13-0913 TCGA-13-0920 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 
       44.94        29.98        13.81         4.21         5.33        54.61 
TCGA-13-1485 TCGA-13-1507 TCGA-13-1512 TCGA-13-2057 TCGA-13-2059 TCGA-13-2060 
       20.68         4.77         3.09        14.24        12.23         8.58 
TCGA-20-0996 TCGA-20-1683 TCGA-23-1022 TCGA-23-1114 TCGA-23-1809 TCGA-23-2079 
       72.20        25.38        42.51        68.68         0.53        91.66 
TCGA-24-1419 TCGA-24-1436 TCGA-24-1474 TCGA-24-1553 TCGA-24-1556 TCGA-24-1565 
        7.86         8.55        22.19        58.09        70.62        10.26 
TCGA-24-1924 TCGA-24-2035 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 TCGA-24-2262 
       30.21        28.18        44.48        57.07        36.16         0.36 
TCGA-24-2289 TCGA-25-1313 TCGA-25-1623 TCGA-25-1626 TCGA-25-1878 TCGA-25-2397 
       67.36        26.93        18.58        15.78        85.05        12.00 
TCGA-25-2408 TCGA-29-1690 TCGA-29-1702 TCGA-29-1710 TCGA-29-1763 TCGA-29-1766 
       30.97        44.71        18.64        29.23        66.77        39.09 
TCGA-29-1774 TCGA-29-2429 TCGA-29-2434 TCGA-29-2436 TCGA-36-1569 TCGA-36-1577 
       17.29         4.87        11.47         9.76        29.06        25.74 
TCGA-36-1578 TCGA-36-1580 TCGA-36-1581 TCGA-36-2540 TCGA-36-2551 TCGA-36-2552 
       27.85        24.23        24.69        23.80        16.14        11.47 
TCGA-42-2588 TCGA-57-1586 TCGA-57-1992 TCGA-57-1994 TCGA-59-2349 TCGA-59-2352 
        9.44        22.32        28.96        25.02        80.12         9.40 
TCGA-61-1721 TCGA-61-1722 TCGA-61-1900 TCGA-61-1904 TCGA-61-1911 TCGA-61-2009 
       11.11         8.05         5.79         9.07        42.48        39.85 
TCGA-61-2017 TCGA-61-2018 TCGA-61-2092 TCGA-61-2612 
       45.96        45.40        51.72         6.35 

  17P LOSS MUTATED 17P LOSS WILD-TYPE 
              0.26               0.36 
  17P LOSS MUTATED 17P LOSS WILD-TYPE 
            180.16              91.66 
  17P LOSS MUTATED 17P LOSS WILD-TYPE 
             28.70              25.56 
[1] "0.3 - 180.2 (28.7)" "0.4 - 91.7 (25.6)" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-61-2614 
  "17P LOSS MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-61-2614 
  "17P LOSS MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE" "17P LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "17P LOSS MUTATED"   "17P LOSS MUTATED" "17P LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"17P LOSS WILD-TYPE"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "17P LOSS MUTATED"   "17P LOSS MUTATED"   "17P LOSS MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "17P LOSS MUTATED" "17P LOSS WILD-TYPE"   "17P LOSS MUTATED" 
        TCGA-61-2614 
  "17P LOSS MUTATED" 
[1] "hr=" "1"  
D70V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  17P LOSS MUTATED         2   454                1
  17P LOSS WILD-TYPE       0    94                1
D70V3, multiclass
                  clus
vv                 17P LOSS MUTATED 17P LOSS WILD-TYPE
  OMENTUM                         2                  0
  OVARY                         454                 94
  PERITONEUM OVARY                1                  1
D70V4, continuous
D70V5, binary
                    cls
clus                   0   1
  17P LOSS MUTATED     2 463
  17P LOSS WILD-TYPE   1  96
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  17P LOSS MUTATED      2  463
  17P LOSS WILD-TYPE    1   96
     clus
vv    17P LOSS MUTATED 17P LOSS WILD-TYPE
  NO                 2                  1
  YES              463                 96
                    vv
clus                 R0 R1 R2
  17P LOSS MUTATED   10 22  1
  17P LOSS WILD-TYPE  4  4  1
D70V6, multiclass
    clus
vv   17P LOSS MUTATED 17P LOSS WILD-TYPE
  R0               10                  4
  R1               22                  4
  R2                1                  1

Clustering(71) Variable = 17Q LOSS MUTATION ANALYSIS
D71V1, survival
                    sevent
clus2                  0   1
  17Q LOSS MUTATED   169 184
  17Q LOSS WILD-TYPE  92 102
  17Q LOSS MUTATED 17Q LOSS WILD-TYPE 
               353                194 
  17Q LOSS MUTATED 17Q LOSS WILD-TYPE 
               184                102 
$`17Q LOSS MUTATED`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1338 TCGA-04-1343 TCGA-04-1347 TCGA-04-1348 
       40.24        41.00        46.62        11.87        63.06        48.76 
TCGA-04-1349 TCGA-04-1350 TCGA-04-1351 TCGA-04-1361 TCGA-04-1364 TCGA-04-1365 
       21.57        63.98        65.46        32.52        33.67        76.54 
TCGA-04-1367 TCGA-04-1371 TCGA-04-1517 TCGA-04-1536 TCGA-04-1542 TCGA-04-1638 
       71.47        82.36        19.99        29.06        84.20        55.40 
TCGA-04-1644 TCGA-04-1646 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 
       48.89        27.88        28.64        64.64        36.23        31.86 
TCGA-04-1654 TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 
       47.70        45.34        29.16         9.47        57.73        17.95 
TCGA-09-1664 TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 
       74.89        57.57        61.87        55.36        30.48        17.98 
TCGA-09-1672 TCGA-09-1673 TCGA-09-1675 TCGA-09-2044 TCGA-09-2045 TCGA-09-2049 
        5.85         3.02        97.55         6.12        35.15       112.37 
TCGA-09-2050 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-10-0926 TCGA-10-0927 
       71.11        39.75        20.91        26.93        25.91        81.47 
TCGA-10-0928 TCGA-10-0930 TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 
       18.48        33.24        19.86         6.21        24.59        44.55 
TCGA-13-0723 TCGA-13-0724 TCGA-13-0758 TCGA-13-0762 TCGA-13-0766 TCGA-13-0791 
       39.58         2.73        11.38        32.25        21.40        38.93 
TCGA-13-0793 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0801 TCGA-13-0803 
       28.70        19.56         8.71         7.79         8.28        43.82 
TCGA-13-0804 TCGA-13-0805 TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 
       35.28        35.28        68.91       107.18        91.40        74.27 
TCGA-13-0887 TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 TCGA-13-0901 TCGA-13-0903 
       66.64        67.99        69.01        43.36        19.36        47.38 
TCGA-13-0904 TCGA-13-0905 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0916 
       48.33        47.84        44.84        37.08        27.68        21.14 
TCGA-13-0919 TCGA-13-0921 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 
       14.89         4.64         6.08        10.88         6.61         7.36 
TCGA-13-1407 TCGA-13-1409 TCGA-13-1410 TCGA-13-1481 TCGA-13-1482 TCGA-13-1484 
        6.05         6.84         4.70        87.06        61.71        98.04 
TCGA-13-1488 TCGA-13-1491 TCGA-13-1492 TCGA-13-1494 TCGA-13-1495 TCGA-13-1497 
       70.82        52.44        73.55        38.17        49.22        54.31 
TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 
       38.37        13.97        32.84        16.57         4.21         4.41 
TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-2059 TCGA-13-2061 TCGA-13-2065 
        4.14         2.56         3.88        12.23        10.78         8.75 
TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-1682 TCGA-20-1684 
        6.28        23.05        25.94        26.20        27.48        19.07 
TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 TCGA-23-1024 TCGA-23-1026 
       16.67         2.93         2.66        47.54        15.39        26.83 
TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1111 TCGA-23-1113 
        8.81        29.10        18.87         2.24         3.22        31.20 
TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 
      129.96         4.27         6.38        39.09        33.47        58.13 
TCGA-23-2072 TCGA-23-2077 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 
       24.95       115.89        77.00        49.84         2.76         4.70 
TCGA-23-2645 TCGA-24-0968 TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 
        4.50        19.63        41.56         7.66        22.32        54.08 
TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1418 TCGA-24-1422 
       63.55        47.41         6.31         6.38         7.99         0.76 
TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 
        6.25         6.02         5.95         4.80        17.36        28.34 
TCGA-24-1431 TCGA-24-1434 TCGA-24-1463 TCGA-24-1466 TCGA-24-1467 TCGA-24-1469 
       19.17        18.67        72.92        45.14       105.99         9.11 
TCGA-24-1470 TCGA-24-1471 TCGA-24-1544 TCGA-24-1545 TCGA-24-1548 TCGA-24-1550 
        3.42         1.18        26.96        57.37        16.21        41.06 
TCGA-24-1551 TCGA-24-1555 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 
       51.91        88.50        39.88        19.53        44.09        45.50 
TCGA-24-1564 TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 
       25.87        90.15        88.34        48.33        38.24         8.32 
TCGA-24-1847 TCGA-24-1849 TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 TCGA-24-1928 
       11.28         5.75         9.80        22.65        30.21        11.05 
TCGA-24-1930 TCGA-24-2019 TCGA-24-2023 TCGA-24-2026 TCGA-24-2029 TCGA-24-2030 
       81.11         4.87        44.84        34.82        14.43        53.95 
TCGA-24-2033 TCGA-24-2036 TCGA-24-2254 TCGA-24-2267 TCGA-24-2280 TCGA-24-2281 
       18.48        64.01        57.07        47.54        70.45        44.58 
TCGA-24-2288 TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 TCGA-25-1312 
        0.82        36.23        16.64        33.11        55.86         1.02 
TCGA-25-1313 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 TCGA-25-1320 
       26.93        51.06        37.02         1.02        34.98        36.95 
TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1625 TCGA-25-1627 TCGA-25-1628 
       33.96         2.99        12.00        18.02         0.36        20.58 
TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 TCGA-25-1635 
        7.86         0.30        56.94        60.59        35.54        51.22 
TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 TCGA-25-2391 TCGA-25-2393 TCGA-25-2396 
       14.93        24.99        18.05        49.05        38.04         3.02 
TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 TCGA-25-2404 TCGA-29-1688 
       12.00        45.01        19.99        42.02        29.00        78.87 
TCGA-29-1691 TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 
       47.18       101.75        38.53         0.79        33.70        31.17 
TCGA-29-1698 TCGA-29-1701 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1761 
       68.28        16.90        59.67        18.25        41.95        17.00 
TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 
       85.68        66.77        62.93        22.98        24.36        22.52 
TCGA-29-1775 TCGA-29-1776 TCGA-29-1777 TCGA-29-1778 TCGA-29-1781 TCGA-29-1783 
       12.36        11.84        12.30        14.93         8.35         7.20 
TCGA-29-1784 TCGA-29-2427 TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 TCGA-30-1714 
        5.36        62.47         4.87        42.25        11.84        38.07 
TCGA-30-1718 TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 
       51.91        36.26         2.47        15.68         0.26        48.07 
TCGA-30-1860 TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 TCGA-30-1880 TCGA-30-1887 
       44.91        34.78         6.08        36.62        57.57        24.26 
TCGA-30-1891 TCGA-31-1950 TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-36-1568 
       30.05        18.77         6.71        42.51        44.09        28.73 
TCGA-36-1571 TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 TCGA-36-2529 TCGA-36-2530 
       22.85         8.55        30.05        25.74        35.05        33.01 
TCGA-36-2532 TCGA-36-2537 TCGA-36-2538 TCGA-36-2542 TCGA-36-2545 TCGA-36-2548 
       29.49        25.91        25.08        21.60        18.31        14.17 
TCGA-36-2549 TCGA-42-2582 TCGA-42-2587 TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 
        6.05        26.04        23.74         7.56         7.46        22.39 
TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 TCGA-57-1993 TCGA-59-2348 TCGA-59-2351 
       24.03        11.38        21.14        25.05       180.16       116.12 
TCGA-59-2355 TCGA-59-2372 TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 
        2.14        44.78        20.94        31.40        18.54        27.88 
TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 
        4.34        31.76        28.47         2.43        33.67        43.69 
TCGA-61-1895 TCGA-61-1899 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 
        1.41         8.42        11.41        13.02         9.07        34.13 
TCGA-61-1907 TCGA-61-1910 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 
       31.30        37.02        67.73        43.43        15.75        38.17 
TCGA-61-1995 TCGA-61-1998 TCGA-61-2003 TCGA-61-2012 TCGA-61-2016 TCGA-61-2018 
        1.97         5.52         3.98        30.64         1.18        45.40 
TCGA-61-2087 TCGA-61-2088 TCGA-61-2094 TCGA-61-2097 TCGA-61-2101 TCGA-61-2104 
        4.80         4.77        71.74        60.62        55.50        76.83 
TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 TCGA-61-2613 
       20.68        44.52       125.72        22.22        31.07 

$`17Q LOSS WILD-TYPE`
TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1342 TCGA-04-1346 TCGA-04-1356 
        1.81        49.15         2.01        18.51        65.49        49.28 
TCGA-04-1362 TCGA-04-1514 TCGA-04-1516 TCGA-04-1525 TCGA-04-1530 TCGA-09-0369 
       44.32        56.55        41.59        38.37       119.08        35.54 
TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1665 TCGA-09-1674 TCGA-09-2043 
        9.96        38.43        89.33        41.59         8.55         6.15 
TCGA-09-2048 TCGA-09-2051 TCGA-09-2056 TCGA-10-0925 TCGA-10-0931 TCGA-10-0933 
        4.50        63.09        12.46        54.31        32.28        11.70 
TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 TCGA-13-0725 TCGA-13-0726 
        3.88        35.41        35.80        15.12        12.39        31.07 
TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 TCGA-13-0757 TCGA-13-0760 
       15.19        17.79        55.17         2.47        11.18        11.54 
TCGA-13-0761 TCGA-13-0764 TCGA-13-0768 TCGA-13-0792 TCGA-13-0794 TCGA-13-0800 
       34.06        31.04         8.42        36.72        30.35         8.12 
TCGA-13-0802 TCGA-13-0807 TCGA-13-0888 TCGA-13-0889 TCGA-13-0897 TCGA-13-0899 
        8.19        13.61        70.39        61.81        57.47        56.15 
TCGA-13-0900 TCGA-13-0906 TCGA-13-0912 TCGA-13-0913 TCGA-13-0920 TCGA-13-0923 
       57.07        44.94        34.06        29.98        13.81         6.41 
TCGA-13-1408 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 TCGA-13-1483 TCGA-13-1485 
        5.92         4.21         5.33        54.61        29.39        20.68 
TCGA-13-1487 TCGA-13-1489 TCGA-13-1496 TCGA-13-1498 TCGA-13-1507 TCGA-13-1512 
       22.39        82.88         4.24        37.61         4.77         3.09 
TCGA-13-2057 TCGA-13-2060 TCGA-20-0996 TCGA-20-1683 TCGA-23-1022 TCGA-23-1023 
       14.24         8.58        72.20        25.38        42.51        40.54 
TCGA-23-1027 TCGA-23-1028 TCGA-23-1109 TCGA-23-1110 TCGA-23-1114 TCGA-23-1116 
       31.73        49.41        51.35        54.51        68.68         4.57 
TCGA-23-1117 TCGA-23-1118 TCGA-23-1809 TCGA-23-2078 TCGA-23-2079 TCGA-24-0966 
       33.30        86.01         0.53        87.48        91.66         7.63 
TCGA-24-0970 TCGA-24-0975 TCGA-24-1417 TCGA-24-1419 TCGA-24-1426 TCGA-24-1435 
       11.64        21.80         7.82         7.86         5.36        43.53 
TCGA-24-1436 TCGA-24-1464 TCGA-24-1474 TCGA-24-1546 TCGA-24-1549 TCGA-24-1552 
        8.55        12.46        22.19        64.27        56.58        41.39 
TCGA-24-1553 TCGA-24-1556 TCGA-24-1563 TCGA-24-1565 TCGA-24-1567 TCGA-24-1843 
       58.09        70.62        47.70        10.26        17.23         3.48 
TCGA-24-1844 TCGA-24-1845 TCGA-24-1846 TCGA-24-1850 TCGA-24-1927 TCGA-24-2020 
        3.72         3.81         4.37         5.49        16.41       151.99 
TCGA-24-2024 TCGA-24-2027 TCGA-24-2035 TCGA-24-2038 TCGA-24-2260 TCGA-24-2261 
       58.16       109.68        28.18        44.48        36.16         0.79 
TCGA-24-2262 TCGA-24-2271 TCGA-24-2289 TCGA-24-2298 TCGA-25-1314 TCGA-25-1319 
        0.36        31.63        67.36        53.26        31.99        65.00 
TCGA-25-1329 TCGA-25-1623 TCGA-25-1626 TCGA-25-1878 TCGA-25-2042 TCGA-25-2392 
        2.96        18.58        15.78        85.05        13.02         1.02 
TCGA-25-2401 TCGA-25-2408 TCGA-25-2409 TCGA-29-1690 TCGA-29-1699 TCGA-29-1702 
        2.96        30.97        26.96        44.71         0.53        18.64 
TCGA-29-1710 TCGA-29-1711 TCGA-29-1766 TCGA-29-1768 TCGA-29-1774 TCGA-29-1785 
       29.23        34.62        39.09        31.23        17.29        34.62 
TCGA-29-2414 TCGA-29-2425 TCGA-29-2428 TCGA-29-2434 TCGA-29-2436 TCGA-30-1867 
       86.17        65.00        45.11        11.47         9.76         1.18 
TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1951 TCGA-31-1959 TCGA-36-1569 
       48.79        45.57        30.18        22.45         2.17        29.06 
TCGA-36-1570 TCGA-36-1574 TCGA-36-1578 TCGA-36-1580 TCGA-36-1581 TCGA-36-2534 
       21.53        22.55        27.85        24.23        24.69        29.79 
TCGA-36-2540 TCGA-36-2543 TCGA-36-2544 TCGA-36-2547 TCGA-36-2551 TCGA-36-2552 
       23.80         2.24        20.98        20.52        16.14        11.47 
TCGA-42-2588 TCGA-42-2593 TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 TCGA-57-1994 
        9.44         1.48         1.74        22.32        28.96        25.02 
TCGA-59-2349 TCGA-59-2350 TCGA-59-2352 TCGA-59-2354 TCGA-59-2363 TCGA-61-1721 
       80.12        22.32         9.40        34.39         5.39        11.11 
TCGA-61-1722 TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1900 TCGA-61-1911 
        8.05        48.79        44.84        35.80         5.79        42.48 
TCGA-61-1913 TCGA-61-1914 TCGA-61-2000 TCGA-61-2002 TCGA-61-2008 TCGA-61-2009 
       48.92        56.58        14.50        17.98        30.61        39.85 
TCGA-61-2017 TCGA-61-2092 TCGA-61-2095 TCGA-61-2096 TCGA-61-2098 TCGA-61-2102 
       45.96        51.72        61.64        58.39        65.49         6.48 
TCGA-61-2612 TCGA-61-2614 
        6.35         8.58 

  17Q LOSS MUTATED 17Q LOSS WILD-TYPE 
              0.26               0.36 
  17Q LOSS MUTATED 17Q LOSS WILD-TYPE 
            180.16             151.99 
  17Q LOSS MUTATED 17Q LOSS WILD-TYPE 
            28.340             28.015 
[1] "0.3 - 180.2 (28.3)" "0.4 - 152.0 (28.0)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-61-2614 
"17Q LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-61-2614 
"17Q LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" "17Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "17Q LOSS MUTATED"   "17Q LOSS MUTATED"   "17Q LOSS MUTATED" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "17Q LOSS MUTATED" "17Q LOSS WILD-TYPE"   "17Q LOSS MUTATED" 
        TCGA-61-2614 
"17Q LOSS WILD-TYPE" 
[1] "hr=" "1.1"
D71V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  17Q LOSS MUTATED         2   353                1
  17Q LOSS WILD-TYPE       0   195                1
D71V3, multiclass
                  clus
vv                 17Q LOSS MUTATED 17Q LOSS WILD-TYPE
  OMENTUM                         2                  0
  OVARY                         353                195
  PERITONEUM OVARY                1                  1
D71V4, continuous
D71V5, binary
                    cls
clus                   0   1
  17Q LOSS MUTATED     3 361
  17Q LOSS WILD-TYPE   0 198
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  17Q LOSS MUTATED      3  361
  17Q LOSS WILD-TYPE    0  198
     clus
vv    17Q LOSS MUTATED 17Q LOSS WILD-TYPE
  NO                 3                  0
  YES              361                198
                    vv
clus                 R0 R1 R2
  17Q LOSS MUTATED    8 15  0
  17Q LOSS WILD-TYPE  6 11  2
D71V6, multiclass
    clus
vv   17Q LOSS MUTATED 17Q LOSS WILD-TYPE
  R0                8                  6
  R1               15                 11
  R2                0                  2

Clustering(72) Variable = 18P LOSS MUTATION ANALYSIS
D72V1, survival
                    sevent
clus2                  0   1
  18P LOSS MUTATED    92 128
  18P LOSS WILD-TYPE 169 158
  18P LOSS MUTATED 18P LOSS WILD-TYPE 
               220                327 
  18P LOSS MUTATED 18P LOSS WILD-TYPE 
               128                158 
$`18P LOSS MUTATED`
TCGA-04-1338 TCGA-04-1350 TCGA-04-1351 TCGA-04-1362 TCGA-04-1364 TCGA-04-1514 
       46.62        63.98        65.46        44.32        33.67        56.55 
TCGA-04-1517 TCGA-04-1530 TCGA-04-1646 TCGA-04-1649 TCGA-04-1651 TCGA-04-1655 
       19.99       119.08        27.88        64.64        36.23        45.34 
TCGA-09-0367 TCGA-09-1666 TCGA-09-1667 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 
       17.95        57.57        61.87        17.98         5.85         3.02 
TCGA-09-2044 TCGA-09-2053 TCGA-09-2054 TCGA-10-0926 TCGA-10-0927 TCGA-10-0931 
        6.12        39.75        20.91        25.91        81.47        32.28 
TCGA-13-0714 TCGA-13-0720 TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 
        6.21        44.55         2.73        12.39        31.07        15.19 
TCGA-13-0751 TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 TCGA-13-0764 
       55.17         2.47        11.18        11.38        11.54        31.04 
TCGA-13-0766 TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0800 TCGA-13-0803 
       21.40        36.72        28.70        30.35         8.12        43.82 
TCGA-13-0804 TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 TCGA-13-0891 TCGA-13-0903 
       35.28        13.61        68.91       107.18        69.01        47.38 
TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0924 TCGA-13-1403 TCGA-13-1405 
       37.08        27.68        34.06         6.08        10.88         7.36 
TCGA-13-1409 TCGA-13-1483 TCGA-13-1487 TCGA-13-1488 TCGA-13-1495 TCGA-13-1498 
        6.84        29.39        22.39        70.82        49.22        37.61 
TCGA-13-1506 TCGA-13-2057 TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0990 
        4.41        14.24        10.78         8.75         6.28        25.94 
TCGA-20-0991 TCGA-20-1683 TCGA-20-1684 TCGA-20-1687 TCGA-23-1021 TCGA-23-1027 
       26.20        25.38        19.07         2.66        47.54        31.73 
TCGA-23-1032 TCGA-23-1111 TCGA-23-1113 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 
        2.24         3.22        31.20         4.57        33.30        86.01 
TCGA-23-1122 TCGA-23-2072 TCGA-23-2079 TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 
       39.09        24.95        91.66        49.84         2.76         4.70 
TCGA-24-0966 TCGA-24-0970 TCGA-24-0979 TCGA-24-0982 TCGA-24-1104 TCGA-24-1413 
        7.63        11.64        41.56        22.32        63.55         6.31 
TCGA-24-1416 TCGA-24-1423 TCGA-24-1425 TCGA-24-1427 TCGA-24-1431 TCGA-24-1436 
        6.38         6.25         5.95         4.80        19.17         8.55 
TCGA-24-1463 TCGA-24-1464 TCGA-24-1470 TCGA-24-1471 TCGA-24-1544 TCGA-24-1545 
       72.92        12.46         3.42         1.18        26.96        57.37 
TCGA-24-1546 TCGA-24-1548 TCGA-24-1551 TCGA-24-1557 TCGA-24-1560 TCGA-24-1562 
       64.27        16.21        51.91        39.88        44.09        45.50 
TCGA-24-1563 TCGA-24-1564 TCGA-24-1603 TCGA-24-1614 TCGA-24-1843 TCGA-24-1847 
       47.70        25.87        90.15        48.33         3.48        11.28 
TCGA-24-1849 TCGA-24-1920 TCGA-24-1923 TCGA-24-1927 TCGA-24-1928 TCGA-24-2023 
        5.75         9.80        22.65        16.41        11.05        44.84 
TCGA-24-2027 TCGA-24-2260 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2288 
      109.68        36.16        47.54        31.63        70.45         0.82 
TCGA-24-2293 TCGA-24-2298 TCGA-25-1313 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 
       16.64        53.26        26.93        51.06        37.02         1.02 
TCGA-25-1320 TCGA-25-1322 TCGA-25-1329 TCGA-25-1626 TCGA-25-1627 TCGA-25-1630 
       36.95         2.99         2.96        15.78         0.36         7.86 
TCGA-25-1632 TCGA-25-1634 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 TCGA-25-2392 
       56.94        35.54        18.05        85.05        13.02         1.02 
TCGA-25-2393 TCGA-25-2398 TCGA-25-2401 TCGA-25-2404 TCGA-25-2409 TCGA-29-1694 
       38.04        45.01         2.96        29.00        26.96        38.53 
TCGA-29-1697 TCGA-29-1701 TCGA-29-1703 TCGA-29-1707 TCGA-29-1762 TCGA-29-1763 
       31.17        16.90        59.67        41.95        85.68        66.77 
TCGA-29-1764 TCGA-29-1768 TCGA-29-1770 TCGA-29-1775 TCGA-29-1777 TCGA-29-1783 
       62.93        31.23        24.36        12.36        12.30         7.20 
TCGA-29-2414 TCGA-29-2427 TCGA-29-2428 TCGA-29-2434 TCGA-30-1714 TCGA-30-1718 
       86.17        62.47        45.11        11.47        38.07        51.91 
TCGA-30-1855 TCGA-30-1856 TCGA-30-1860 TCGA-30-1861 TCGA-30-1880 TCGA-30-1891 
        2.47        15.68        44.91        34.78        57.57        30.05 
TCGA-30-1892 TCGA-31-1946 TCGA-36-1568 TCGA-36-1569 TCGA-36-1571 TCGA-36-1575 
       48.79        30.18        28.73        29.06        22.85         8.55 
TCGA-36-1577 TCGA-36-1580 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2542 
       25.74        24.23        33.01        29.49        29.79        21.60 
TCGA-36-2543 TCGA-36-2545 TCGA-36-2548 TCGA-36-2552 TCGA-42-2587 TCGA-42-2591 
        2.24        18.31        14.17        11.47        23.74        22.39 
TCGA-42-2593 TCGA-57-1582 TCGA-57-1585 TCGA-57-1993 TCGA-59-2350 TCGA-59-2351 
        1.48        24.03         1.74        25.05        22.32       116.12 
TCGA-59-2354 TCGA-59-2363 TCGA-59-2372 TCGA-61-1724 TCGA-61-1727 TCGA-61-1741 
       34.39         5.39        44.78        20.94        18.54        33.67 
TCGA-61-1743 TCGA-61-1895 TCGA-61-1906 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 
       43.69         1.41        34.13        38.17         1.97         5.52 
TCGA-61-2002 TCGA-61-2009 TCGA-61-2094 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 
       17.98        39.85        71.74        65.49        55.50         6.48 
TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 TCGA-61-2613 
       76.83        20.68        44.52        31.07 

$`18P LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1342 
       40.24        41.00         1.81        49.15         2.01        18.51 
TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 TCGA-04-1356 
       11.87        65.49        63.06        48.76        21.57        49.28 
TCGA-04-1361 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1516 TCGA-04-1525 
       32.52        76.54        71.47        82.36        41.59        38.37 
TCGA-04-1536 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 TCGA-04-1648 TCGA-04-1652 
       29.06        84.20        55.40        48.89        28.64        31.86 
TCGA-04-1654 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0369 TCGA-09-1659 
       47.70        29.16         9.47        57.73        35.54         9.96 
TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1668 TCGA-09-1669 
       38.43        89.33        74.89        41.59        55.36        30.48 
TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 TCGA-09-2045 TCGA-09-2048 TCGA-09-2049 
        8.55        97.55         6.15        35.15         4.50       112.37 
TCGA-09-2050 TCGA-09-2051 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0928 
       71.11        63.09        26.93        12.46        54.31        18.48 
TCGA-10-0930 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 
       33.24        11.70         3.88        35.41        35.80        15.12 
TCGA-10-0938 TCGA-13-0717 TCGA-13-0723 TCGA-13-0730 TCGA-13-0761 TCGA-13-0762 
       19.86        24.59        39.58        17.79        34.06        32.25 
TCGA-13-0768 TCGA-13-0791 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0801 
        8.42        38.93        19.56         8.71         7.79         8.28 
TCGA-13-0802 TCGA-13-0805 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 
        8.19        35.28        91.40        74.27        66.64        70.39 
TCGA-13-0889 TCGA-13-0890 TCGA-13-0893 TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 
       61.81        67.99        43.36        57.47        56.15        57.07 
TCGA-13-0901 TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0913 
       19.36        48.33        47.84        44.94        44.84        29.98 
TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 TCGA-13-0921 TCGA-13-0923 TCGA-13-1404 
       21.14        14.89        13.81         4.64         6.41         6.61 
TCGA-13-1407 TCGA-13-1408 TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 
        6.05         5.92         4.70         4.21         5.33        54.61 
TCGA-13-1481 TCGA-13-1482 TCGA-13-1484 TCGA-13-1485 TCGA-13-1489 TCGA-13-1491 
       87.06        61.71        98.04        20.68        82.88        52.44 
TCGA-13-1492 TCGA-13-1494 TCGA-13-1496 TCGA-13-1497 TCGA-13-1499 TCGA-13-1500 
       73.55        38.17         4.24        54.31        38.37        13.97 
TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 
       32.84        16.57         4.21         4.77         4.14         2.56 
TCGA-13-1511 TCGA-13-1512 TCGA-13-2059 TCGA-13-2060 TCGA-20-0987 TCGA-20-0996 
        3.88         3.09        12.23         8.58        23.05        72.20 
TCGA-20-1682 TCGA-20-1685 TCGA-20-1686 TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 
       27.48        16.67         2.93        42.51        40.54        15.39 
TCGA-23-1026 TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 TCGA-23-1109 
       26.83        49.41         8.81        29.10        18.87        51.35 
TCGA-23-1110 TCGA-23-1114 TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 TCGA-23-1123 
       54.51        68.68       129.96         4.27         6.38        33.47 
TCGA-23-1124 TCGA-23-1809 TCGA-23-2077 TCGA-23-2078 TCGA-23-2081 TCGA-23-2645 
       58.13         0.53       115.89        87.48        77.00         4.50 
TCGA-24-0968 TCGA-24-0975 TCGA-24-0980 TCGA-24-1103 TCGA-24-1105 TCGA-24-1417 
       19.63        21.80         7.66        54.08        47.41         7.82 
TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1424 TCGA-24-1426 TCGA-24-1428 
        7.99         7.86         0.76         6.02         5.36        17.36 
TCGA-24-1430 TCGA-24-1434 TCGA-24-1435 TCGA-24-1466 TCGA-24-1467 TCGA-24-1469 
       28.34        18.67        43.53        45.14       105.99         9.11 
TCGA-24-1474 TCGA-24-1549 TCGA-24-1550 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 
       22.19        56.58        41.06        41.39        58.09        88.50 
TCGA-24-1556 TCGA-24-1558 TCGA-24-1565 TCGA-24-1567 TCGA-24-1604 TCGA-24-1616 
       70.62        19.53        10.26        17.23        88.34        38.24 
TCGA-24-1842 TCGA-24-1844 TCGA-24-1845 TCGA-24-1846 TCGA-24-1850 TCGA-24-1924 
        8.32         3.72         3.81         4.37         5.49        30.21 
TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 TCGA-24-2024 TCGA-24-2026 TCGA-24-2029 
       81.11         4.87       151.99        58.16        34.82        14.43 
TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 
       53.95        18.48        28.18        64.01        44.48        57.07 
TCGA-24-2261 TCGA-24-2262 TCGA-24-2281 TCGA-24-2289 TCGA-24-2290 TCGA-24-2295 
        0.79         0.36        44.58        67.36        36.23        33.11 
TCGA-24-2297 TCGA-25-1312 TCGA-25-1314 TCGA-25-1318 TCGA-25-1319 TCGA-25-1321 
       55.86         1.02        31.99        34.98        65.00        33.96 
TCGA-25-1323 TCGA-25-1623 TCGA-25-1625 TCGA-25-1628 TCGA-25-1631 TCGA-25-1633 
       12.00        18.58        18.02        20.58         0.30        60.59 
TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 TCGA-25-2391 TCGA-25-2396 TCGA-25-2397 
       51.22        14.93        24.99        49.05         3.02        12.00 
TCGA-25-2399 TCGA-25-2400 TCGA-25-2408 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 
       19.99        42.02        30.97        78.87        44.71        47.18 
TCGA-29-1693 TCGA-29-1695 TCGA-29-1696 TCGA-29-1698 TCGA-29-1699 TCGA-29-1702 
      101.75         0.79        33.70        68.28         0.53        18.64 
TCGA-29-1705 TCGA-29-1710 TCGA-29-1711 TCGA-29-1761 TCGA-29-1766 TCGA-29-1769 
       18.25        29.23        34.62        17.00        39.09        22.98 
TCGA-29-1771 TCGA-29-1774 TCGA-29-1776 TCGA-29-1778 TCGA-29-1781 TCGA-29-1784 
       22.52        17.29        11.84        14.93         8.35         5.36 
TCGA-29-1785 TCGA-29-2425 TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 TCGA-29-2436 
       34.62        65.00         4.87        42.25        11.84         9.76 
TCGA-30-1853 TCGA-30-1857 TCGA-30-1859 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 
       36.26         0.26        48.07         6.08        36.62         1.18 
TCGA-30-1887 TCGA-31-1944 TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 
       24.26        45.57        18.77        22.45         6.71        42.51 
TCGA-31-1956 TCGA-31-1959 TCGA-36-1570 TCGA-36-1574 TCGA-36-1576 TCGA-36-1578 
       44.09         2.17        21.53        22.55        30.05        27.85 
TCGA-36-1581 TCGA-36-2529 TCGA-36-2537 TCGA-36-2538 TCGA-36-2540 TCGA-36-2544 
       24.69        35.05        25.91        25.08        23.80        20.98 
TCGA-36-2547 TCGA-36-2549 TCGA-36-2551 TCGA-42-2582 TCGA-42-2588 TCGA-42-2589 
       20.52         6.05        16.14        26.04         9.44         7.56 
TCGA-42-2590 TCGA-57-1583 TCGA-57-1584 TCGA-57-1586 TCGA-57-1992 TCGA-57-1994 
        7.46        11.38        21.14        22.32        28.96        25.02 
TCGA-59-2348 TCGA-59-2349 TCGA-59-2352 TCGA-59-2355 TCGA-61-1721 TCGA-61-1722 
      180.16        80.12         9.40         2.14        11.11         8.05 
TCGA-61-1725 TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 TCGA-61-1736 
       31.40        27.88         4.34        31.76        28.47        48.79 
TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 
       44.84        35.80         2.43         8.42         5.79        11.41 
TCGA-61-1903 TCGA-61-1904 TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 
       13.02         9.07        31.30        37.02        42.48        48.92 
TCGA-61-1914 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-2000 TCGA-61-2003 
       56.58        67.73        43.43        15.75        14.50         3.98 
TCGA-61-2008 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 
       30.61        30.64         1.18        45.96        45.40         4.80 
TCGA-61-2088 TCGA-61-2092 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 TCGA-61-2111 
        4.77        51.72        61.64        58.39        60.62       125.72 
TCGA-61-2113 TCGA-61-2612 TCGA-61-2614 
       22.22         6.35         8.58 

  18P LOSS MUTATED 18P LOSS WILD-TYPE 
              0.36               0.26 
  18P LOSS MUTATED 18P LOSS WILD-TYPE 
            119.08             180.16 
  18P LOSS MUTATED 18P LOSS WILD-TYPE 
             27.32              28.47 
[1] "0.4 - 119.1 (27.3)" "0.3 - 180.2 (28.5)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-61-2614 
"18P LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-61-2614 
"18P LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
  "18P LOSS MUTATED" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"18P LOSS WILD-TYPE"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
  "18P LOSS MUTATED"   "18P LOSS MUTATED"   "18P LOSS MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "18P LOSS MUTATED"   "18P LOSS MUTATED" "18P LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"18P LOSS WILD-TYPE" "18P LOSS WILD-TYPE"   "18P LOSS MUTATED" 
        TCGA-61-2614 
"18P LOSS WILD-TYPE" 
[1] "hr=" "1.3"
D72V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  18P LOSS MUTATED         1   221                0
  18P LOSS WILD-TYPE       1   327                2
D72V3, multiclass
                  clus
vv                 18P LOSS MUTATED 18P LOSS WILD-TYPE
  OMENTUM                         1                  1
  OVARY                         221                327
  PERITONEUM OVARY                0                  2
D72V4, continuous
D72V5, binary
                    cls
clus                   0   1
  18P LOSS MUTATED     2 223
  18P LOSS WILD-TYPE   1 336
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  18P LOSS MUTATED      2  223
  18P LOSS WILD-TYPE    1  336
     clus
vv    18P LOSS MUTATED 18P LOSS WILD-TYPE
  NO                 2                  1
  YES              223                336
                    vv
clus                 R0 R1 R2
  18P LOSS MUTATED    7 12  1
  18P LOSS WILD-TYPE  7 14  1
D72V6, multiclass
    clus
vv   18P LOSS MUTATED 18P LOSS WILD-TYPE
  R0                7                  7
  R1               12                 14
  R2                1                  1

Clustering(73) Variable = 18Q LOSS MUTATION ANALYSIS
D73V1, survival
                    sevent
clus2                  0   1
  18Q LOSS MUTATED   124 148
  18Q LOSS WILD-TYPE 137 138
  18Q LOSS MUTATED 18Q LOSS WILD-TYPE 
               272                275 
  18Q LOSS MUTATED 18Q LOSS WILD-TYPE 
               148                138 
$`18Q LOSS MUTATED`
TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1338 TCGA-04-1347 TCGA-04-1350 
       41.00         1.81        49.15        46.62        63.06        63.98 
TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1517 
       65.46        49.28        32.52        44.32        33.67        19.99 
TCGA-04-1530 TCGA-04-1646 TCGA-04-1649 TCGA-04-1651 TCGA-04-1655 TCGA-09-0367 
      119.08        27.88        64.64        36.23        45.34        17.95 
TCGA-09-1666 TCGA-09-1667 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 TCGA-09-1675 
       57.57        61.87        17.98         5.85         3.02        97.55 
TCGA-09-2043 TCGA-09-2044 TCGA-09-2048 TCGA-09-2050 TCGA-09-2053 TCGA-09-2054 
        6.15         6.12         4.50        71.11        39.75        20.91 
TCGA-09-2056 TCGA-10-0926 TCGA-10-0927 TCGA-10-0930 TCGA-10-0931 TCGA-13-0714 
       12.46        25.91        81.47        33.24        32.28         6.21 
TCGA-13-0720 TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 
       44.55         2.73        12.39        31.07        15.19        17.79 
TCGA-13-0751 TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 TCGA-13-0764 
       55.17         2.47        11.18        11.38        11.54        31.04 
TCGA-13-0766 TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0800 TCGA-13-0803 
       21.40        36.72        28.70        30.35         8.12        43.82 
TCGA-13-0804 TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 TCGA-13-0886 TCGA-13-0899 
       35.28        13.61        68.91       107.18        74.27        56.15 
TCGA-13-0903 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 
       47.38        44.94        44.84        37.08        27.68        34.06 
TCGA-13-0913 TCGA-13-0924 TCGA-13-1403 TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 
       29.98         6.08        10.88         7.36         6.05         5.92 
TCGA-13-1409 TCGA-13-1483 TCGA-13-1487 TCGA-13-1488 TCGA-13-1495 TCGA-13-1498 
        6.84        29.39        22.39        70.82        49.22        37.61 
TCGA-13-1499 TCGA-13-1500 TCGA-13-1505 TCGA-13-1506 TCGA-13-2057 TCGA-13-2059 
       38.37        13.97         4.21         4.41        14.24        12.23 
TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 
       10.78         8.75         6.28        23.05        25.94        26.20 
TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 
       27.48        25.38        19.07        16.67         2.93         2.66 
TCGA-23-1021 TCGA-23-1023 TCGA-23-1027 TCGA-23-1028 TCGA-23-1032 TCGA-23-1111 
       47.54        40.54        31.73        49.41         2.24         3.22 
TCGA-23-1113 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 TCGA-23-1122 
       31.20         4.57        33.30        86.01       129.96        39.09 
TCGA-23-1124 TCGA-23-2072 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 
       58.13        24.95        91.66        77.00        49.84         2.76 
TCGA-23-2643 TCGA-24-0966 TCGA-24-0970 TCGA-24-0979 TCGA-24-0982 TCGA-24-1104 
        4.70         7.63        11.64        41.56        22.32        63.55 
TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 TCGA-24-1423 
       47.41         6.31         6.38         7.82         7.99         6.25 
TCGA-24-1424 TCGA-24-1425 TCGA-24-1427 TCGA-24-1428 TCGA-24-1436 TCGA-24-1463 
        6.02         5.95         4.80        17.36         8.55        72.92 
TCGA-24-1464 TCGA-24-1470 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 
       12.46         3.42         1.18        22.19        26.96        57.37 
TCGA-24-1546 TCGA-24-1548 TCGA-24-1552 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 
       64.27        16.21        41.39        39.88        19.53        44.09 
TCGA-24-1562 TCGA-24-1563 TCGA-24-1564 TCGA-24-1603 TCGA-24-1614 TCGA-24-1843 
       45.50        47.70        25.87        90.15        48.33         3.48 
TCGA-24-1844 TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 
        3.72        11.28         5.75         5.49         9.80        22.65 
TCGA-24-1927 TCGA-24-1928 TCGA-24-2020 TCGA-24-2023 TCGA-24-2027 TCGA-24-2029 
       16.41        11.05       151.99        44.84       109.68        14.43 
TCGA-24-2035 TCGA-24-2260 TCGA-24-2261 TCGA-24-2267 TCGA-24-2271 TCGA-24-2288 
       28.18        36.16         0.79        47.54        31.63         0.82 
TCGA-24-2289 TCGA-24-2293 TCGA-24-2298 TCGA-25-1312 TCGA-25-1313 TCGA-25-1315 
       67.36        16.64        53.26         1.02        26.93        51.06 
TCGA-25-1316 TCGA-25-1317 TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 
       37.02         1.02        33.96         2.99        12.00         2.96 
TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1632 TCGA-25-1634 TCGA-25-1877 
       18.02        15.78         0.36        56.94        35.54        18.05 
TCGA-25-1878 TCGA-25-2042 TCGA-25-2392 TCGA-25-2393 TCGA-25-2401 TCGA-25-2404 
       85.05        13.02         1.02        38.04         2.96        29.00 
TCGA-25-2409 TCGA-29-1694 TCGA-29-1697 TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 
       26.96        38.53        31.17        16.90        18.64        59.67 
TCGA-29-1707 TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 TCGA-29-1768 TCGA-29-1770 
       41.95        85.68        66.77        62.93        31.23        24.36 
TCGA-29-1775 TCGA-29-1777 TCGA-29-1781 TCGA-29-1783 TCGA-29-2414 TCGA-29-2425 
       12.36        12.30         8.35         7.20        86.17        65.00 
TCGA-29-2427 TCGA-29-2428 TCGA-29-2434 TCGA-30-1714 TCGA-30-1718 TCGA-30-1855 
       62.47        45.11        11.47        38.07        51.91         2.47 
TCGA-30-1856 TCGA-30-1861 TCGA-30-1866 TCGA-30-1880 TCGA-30-1891 TCGA-31-1944 
       15.68        34.78        36.62        57.57        30.05        45.57 
TCGA-31-1946 TCGA-31-1959 TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 TCGA-36-1575 
       30.18         2.17        29.06        21.53        22.85         8.55 
TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 TCGA-36-2532 TCGA-36-2534 
       30.05        25.74        27.85        24.23        29.49        29.79 
TCGA-36-2538 TCGA-36-2542 TCGA-36-2543 TCGA-36-2545 TCGA-36-2548 TCGA-36-2552 
       25.08        21.60         2.24        18.31        14.17        11.47 
TCGA-42-2587 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 TCGA-57-1585 
       23.74        22.39         1.48        24.03        11.38         1.74 
TCGA-57-1992 TCGA-57-1993 TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 TCGA-59-2354 
       28.96        25.05        22.32       116.12         9.40        34.39 
TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 TCGA-61-1724 TCGA-61-1737 TCGA-61-1741 
        2.14         5.39        44.78        20.94        44.84        33.67 
TCGA-61-1743 TCGA-61-1895 TCGA-61-1906 TCGA-61-1919 TCGA-61-1995 TCGA-61-2002 
       43.69         1.41        34.13        38.17         1.97        17.98 
TCGA-61-2094 TCGA-61-2097 TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 
       71.74        60.62         6.48        76.83        20.68        44.52 
TCGA-61-2612 TCGA-61-2613 
        6.35        31.07 

$`18Q LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1337 TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1348 
       40.24         2.01        18.51        11.87        65.49        48.76 
TCGA-04-1349 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 
       21.57        76.54        71.47        82.36        56.55        41.59 
TCGA-04-1525 TCGA-04-1536 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 TCGA-04-1648 
       38.37        29.06        84.20        55.40        48.89        28.64 
TCGA-04-1652 TCGA-04-1654 TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0369 
       31.86        47.70        29.16         9.47        57.73        35.54 
TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1668 
        9.96        38.43        89.33        74.89        41.59        55.36 
TCGA-09-1669 TCGA-09-1674 TCGA-09-2045 TCGA-09-2049 TCGA-09-2051 TCGA-09-2055 
       30.48         8.55        35.15       112.37        63.09        26.93 
TCGA-10-0925 TCGA-10-0928 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 
       54.31        18.48        11.70         3.88        35.41        35.80 
TCGA-10-0937 TCGA-10-0938 TCGA-13-0717 TCGA-13-0723 TCGA-13-0761 TCGA-13-0762 
       15.12        19.86        24.59        39.58        34.06        32.25 
TCGA-13-0768 TCGA-13-0791 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0801 
        8.42        38.93        19.56         8.71         7.79         8.28 
TCGA-13-0802 TCGA-13-0805 TCGA-13-0885 TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 
        8.19        35.28        91.40        66.64        70.39        61.81 
TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 TCGA-13-0900 TCGA-13-0901 
       67.99        69.01        43.36        57.47        57.07        19.36 
TCGA-13-0904 TCGA-13-0905 TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 TCGA-13-0921 
       48.33        47.84        21.14        14.89        13.81         4.64 
TCGA-13-0923 TCGA-13-1404 TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 
        6.41         6.61         4.70         4.21         5.33        54.61 
TCGA-13-1481 TCGA-13-1482 TCGA-13-1484 TCGA-13-1485 TCGA-13-1489 TCGA-13-1491 
       87.06        61.71        98.04        20.68        82.88        52.44 
TCGA-13-1492 TCGA-13-1494 TCGA-13-1496 TCGA-13-1497 TCGA-13-1501 TCGA-13-1504 
       73.55        38.17         4.24        54.31        32.84        16.57 
TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2060 
        4.77         4.14         2.56         3.88         3.09         8.58 
TCGA-20-0996 TCGA-23-1022 TCGA-23-1024 TCGA-23-1026 TCGA-23-1029 TCGA-23-1030 
       72.20        42.51        15.39        26.83         8.81        29.10 
TCGA-23-1031 TCGA-23-1109 TCGA-23-1110 TCGA-23-1114 TCGA-23-1120 TCGA-23-1121 
       18.87        51.35        54.51        68.68         4.27         6.38 
TCGA-23-1123 TCGA-23-1809 TCGA-23-2077 TCGA-23-2078 TCGA-23-2645 TCGA-24-0968 
       33.47         0.53       115.89        87.48         4.50        19.63 
TCGA-24-0975 TCGA-24-0980 TCGA-24-1103 TCGA-24-1419 TCGA-24-1422 TCGA-24-1426 
       21.80         7.66        54.08         7.86         0.76         5.36 
TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 TCGA-24-1466 TCGA-24-1467 
       28.34        19.17        18.67        43.53        45.14       105.99 
TCGA-24-1469 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1553 TCGA-24-1555 
        9.11        56.58        41.06        51.91        58.09        88.50 
TCGA-24-1556 TCGA-24-1565 TCGA-24-1567 TCGA-24-1604 TCGA-24-1616 TCGA-24-1842 
       70.62        10.26        17.23        88.34        38.24         8.32 
TCGA-24-1845 TCGA-24-1846 TCGA-24-1924 TCGA-24-1930 TCGA-24-2019 TCGA-24-2024 
        3.81         4.37        30.21        81.11         4.87        58.16 
TCGA-24-2026 TCGA-24-2030 TCGA-24-2033 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 
       34.82        53.95        18.48        64.01        44.48        57.07 
TCGA-24-2262 TCGA-24-2280 TCGA-24-2281 TCGA-24-2290 TCGA-24-2295 TCGA-24-2297 
        0.36        70.45        44.58        36.23        33.11        55.86 
TCGA-25-1314 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1623 TCGA-25-1628 
       31.99        34.98        65.00        36.95        18.58        20.58 
TCGA-25-1630 TCGA-25-1631 TCGA-25-1633 TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 
        7.86         0.30        60.59        51.22        14.93        24.99 
TCGA-25-2391 TCGA-25-2396 TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 
       49.05         3.02        12.00        45.01        19.99        42.02 
TCGA-25-2408 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 TCGA-29-1693 TCGA-29-1695 
       30.97        78.87        44.71        47.18       101.75         0.79 
TCGA-29-1696 TCGA-29-1698 TCGA-29-1699 TCGA-29-1705 TCGA-29-1710 TCGA-29-1711 
       33.70        68.28         0.53        18.25        29.23        34.62 
TCGA-29-1761 TCGA-29-1766 TCGA-29-1769 TCGA-29-1771 TCGA-29-1774 TCGA-29-1776 
       17.00        39.09        22.98        22.52        17.29        11.84 
TCGA-29-1778 TCGA-29-1784 TCGA-29-1785 TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 
       14.93         5.36        34.62         4.87        42.25        11.84 
TCGA-29-2436 TCGA-30-1853 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 TCGA-30-1862 
        9.76        36.26         0.26        48.07        44.91         6.08 
TCGA-30-1867 TCGA-30-1887 TCGA-30-1892 TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 
        1.18        24.26        48.79        18.77        22.45         6.71 
TCGA-31-1955 TCGA-31-1956 TCGA-36-1568 TCGA-36-1574 TCGA-36-1581 TCGA-36-2529 
       42.51        44.09        28.73        22.55        24.69        35.05 
TCGA-36-2530 TCGA-36-2537 TCGA-36-2540 TCGA-36-2544 TCGA-36-2547 TCGA-36-2549 
       33.01        25.91        23.80        20.98        20.52         6.05 
TCGA-36-2551 TCGA-42-2582 TCGA-42-2588 TCGA-42-2589 TCGA-42-2590 TCGA-57-1584 
       16.14        26.04         9.44         7.56         7.46        21.14 
TCGA-57-1586 TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-61-1721 TCGA-61-1722 
       22.32        25.02       180.16        80.12        11.11         8.05 
TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 
       31.40        18.54        27.88         4.34        31.76        28.47 
TCGA-61-1736 TCGA-61-1738 TCGA-61-1740 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 
       48.79        35.80         2.43         8.42         5.79        11.41 
TCGA-61-1903 TCGA-61-1904 TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 
       13.02         9.07        31.30        37.02        42.48        48.92 
TCGA-61-1914 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-1998 TCGA-61-2000 
       56.58        67.73        43.43        15.75         5.52        14.50 
TCGA-61-2003 TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 
        3.98        30.61        39.85        30.64         1.18        45.96 
TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 TCGA-61-2095 TCGA-61-2096 
       45.40         4.80         4.77        51.72        61.64        58.39 
TCGA-61-2098 TCGA-61-2101 TCGA-61-2111 TCGA-61-2113 TCGA-61-2614 
       65.49        55.50       125.72        22.22         8.58 

  18Q LOSS MUTATED 18Q LOSS WILD-TYPE 
              0.36               0.26 
  18Q LOSS MUTATED 18Q LOSS WILD-TYPE 
            151.99             180.16 
  18Q LOSS MUTATED 18Q LOSS WILD-TYPE 
            25.925             30.480 
[1] "0.4 - 152.0 (25.9)" "0.3 - 180.2 (30.5)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-61-2614 
"18Q LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-61-2614 
"18Q LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
  "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" "18Q LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "18Q LOSS MUTATED"   "18Q LOSS MUTATED" "18Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"18Q LOSS WILD-TYPE"   "18Q LOSS MUTATED"   "18Q LOSS MUTATED" 
        TCGA-61-2614 
"18Q LOSS WILD-TYPE" 
[1] "hr=" "1.2"
D73V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  18Q LOSS MUTATED         1   273                0
  18Q LOSS WILD-TYPE       1   275                2
D73V3, multiclass
                  clus
vv                 18Q LOSS MUTATED 18Q LOSS WILD-TYPE
  OMENTUM                         1                  1
  OVARY                         273                275
  PERITONEUM OVARY                0                  2
D73V4, continuous
D73V5, binary
                    cls
clus                   0   1
  18Q LOSS MUTATED     2 278
  18Q LOSS WILD-TYPE   1 281
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  18Q LOSS MUTATED      2  278
  18Q LOSS WILD-TYPE    1  281
     clus
vv    18Q LOSS MUTATED 18Q LOSS WILD-TYPE
  NO                 2                  1
  YES              278                281
                    vv
clus                 R0 R1 R2
  18Q LOSS MUTATED    7 14  1
  18Q LOSS WILD-TYPE  7 12  1
D73V6, multiclass
    clus
vv   18Q LOSS MUTATED 18Q LOSS WILD-TYPE
  R0                7                  7
  R1               14                 12
  R2                1                  1

Clustering(74) Variable = 19P LOSS MUTATION ANALYSIS
D74V1, survival
                    sevent
clus2                  0   1
  19P LOSS MUTATED    83  93
  19P LOSS WILD-TYPE 178 193
  19P LOSS MUTATED 19P LOSS WILD-TYPE 
               176                371 
  19P LOSS MUTATED 19P LOSS WILD-TYPE 
                93                193 
$`19P LOSS MUTATED`
TCGA-04-1332 TCGA-04-1343 TCGA-04-1347 TCGA-04-1349 TCGA-04-1350 TCGA-04-1356 
       41.00        11.87        63.06        21.57        63.98        49.28 
TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1516 
       44.32        33.67        76.54        71.47        82.36        41.59 
TCGA-04-1517 TCGA-04-1530 TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 TCGA-04-1654 
       19.99       119.08        55.40        48.89        27.88        47.70 
TCGA-04-1655 TCGA-09-0366 TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 TCGA-09-1668 
       45.34        57.73        35.54         9.96        38.43        55.36 
TCGA-09-1672 TCGA-09-1673 TCGA-09-2049 TCGA-09-2051 TCGA-09-2053 TCGA-09-2055 
        5.85         3.02       112.37        63.09        39.75        26.93 
TCGA-09-2056 TCGA-10-0928 TCGA-10-0930 TCGA-10-0936 TCGA-10-0937 TCGA-13-0723 
       12.46        18.48        33.24        35.80        15.12        39.58 
TCGA-13-0724 TCGA-13-0730 TCGA-13-0751 TCGA-13-0762 TCGA-13-0768 TCGA-13-0800 
        2.73        17.79        55.17        32.25         8.42         8.12 
TCGA-13-0803 TCGA-13-0885 TCGA-13-0886 TCGA-13-0899 TCGA-13-0908 TCGA-13-0911 
       43.82        91.40        74.27        56.15        44.84        27.68 
TCGA-13-0919 TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 
       14.89         4.64         6.41         6.08        10.88         6.61 
TCGA-13-1405 TCGA-13-1411 TCGA-13-1412 TCGA-13-1483 TCGA-13-1489 TCGA-13-1492 
        7.36         4.21         5.33        29.39        82.88        73.55 
TCGA-13-1496 TCGA-13-1498 TCGA-13-1499 TCGA-13-1504 TCGA-13-1507 TCGA-13-2060 
        4.24        37.61        38.37        16.57         4.77         8.58 
TCGA-13-2061 TCGA-23-1027 TCGA-23-1030 TCGA-23-1032 TCGA-23-1110 TCGA-23-1119 
       10.78        31.73        29.10         2.24        54.51       129.96 
TCGA-23-1120 TCGA-23-1123 TCGA-23-1124 TCGA-23-2072 TCGA-23-2643 TCGA-24-0966 
        4.27        33.47        58.13        24.95         4.70         7.63 
TCGA-24-0968 TCGA-24-0979 TCGA-24-1413 TCGA-24-1424 TCGA-24-1434 TCGA-24-1463 
       19.63        41.56         6.31         6.02        18.67        72.92 
TCGA-24-1464 TCGA-24-1470 TCGA-24-1544 TCGA-24-1549 TCGA-24-1560 TCGA-24-1564 
       12.46         3.42        26.96        56.58        44.09        25.87 
TCGA-24-1565 TCGA-24-1846 TCGA-24-2019 TCGA-24-2024 TCGA-24-2026 TCGA-24-2260 
       10.26         4.37         4.87        58.16        34.82        36.16 
TCGA-24-2288 TCGA-24-2290 TCGA-24-2298 TCGA-25-1313 TCGA-25-1315 TCGA-25-1316 
        0.82        36.23        53.26        26.93        51.06        37.02 
TCGA-25-1317 TCGA-25-1627 TCGA-25-1628 TCGA-25-1630 TCGA-25-1632 TCGA-25-1633 
        1.02         0.36        20.58         7.86        56.94        60.59 
TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 TCGA-25-1878 
       35.54        51.22        14.93        24.99        18.05        85.05 
TCGA-25-2392 TCGA-25-2393 TCGA-25-2396 TCGA-25-2399 TCGA-25-2400 TCGA-25-2404 
        1.02        38.04         3.02        19.99        42.02        29.00 
TCGA-25-2409 TCGA-29-1691 TCGA-29-1696 TCGA-29-1697 TCGA-29-1699 TCGA-29-1701 
       26.96        47.18        33.70        31.17         0.53        16.90 
TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1761 TCGA-29-1763 TCGA-29-1769 
       18.25        41.95        29.23        17.00        66.77        22.98 
TCGA-29-1771 TCGA-29-1774 TCGA-29-1778 TCGA-29-2427 TCGA-29-2428 TCGA-30-1853 
       22.52        17.29        14.93        62.47        45.11        36.26 
TCGA-30-1861 TCGA-30-1866 TCGA-30-1891 TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 
       34.78        36.62        30.05         6.71        42.51        44.09 
TCGA-31-1959 TCGA-36-1568 TCGA-36-1569 TCGA-36-1575 TCGA-36-1576 TCGA-36-1581 
        2.17        28.73        29.06         8.55        30.05        24.69 
TCGA-36-2530 TCGA-36-2537 TCGA-36-2538 TCGA-36-2548 TCGA-36-2551 TCGA-57-1584 
       33.01        25.91        25.08        14.17        16.14        21.14 
TCGA-57-1585 TCGA-57-1993 TCGA-59-2372 TCGA-61-1722 TCGA-61-1733 TCGA-61-1740 
        1.74        25.05        44.78         8.05        31.76         2.43 
TCGA-61-1741 TCGA-61-1903 TCGA-61-1907 TCGA-61-1915 TCGA-61-1917 TCGA-61-1919 
       33.67        13.02        31.30        67.73        43.43        38.17 
TCGA-61-2002 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 TCGA-61-2087 TCGA-61-2088 
       17.98        30.64         1.18        45.96         4.80         4.77 
TCGA-61-2102 TCGA-61-2614 
        6.48         8.58 

$`19P LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 TCGA-04-1342 
       40.24         1.81        49.15         2.01        46.62        18.51 
TCGA-04-1346 TCGA-04-1348 TCGA-04-1351 TCGA-04-1361 TCGA-04-1514 TCGA-04-1525 
       65.49        48.76        65.46        32.52        56.55        38.37 
TCGA-04-1536 TCGA-04-1542 TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 
       29.06        84.20        28.64        64.64        36.23        31.86 
TCGA-09-0364 TCGA-09-0365 TCGA-09-0367 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 
       29.16         9.47        17.95        89.33        74.89        41.59 
TCGA-09-1666 TCGA-09-1667 TCGA-09-1669 TCGA-09-1670 TCGA-09-1674 TCGA-09-1675 
       57.57        61.87        30.48        17.98         8.55        97.55 
TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2050 TCGA-09-2054 
        6.15         6.12        35.15         4.50        71.11        20.91 
TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 
       54.31        25.91        81.47        32.28        11.70         3.88 
TCGA-10-0935 TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0725 
       35.41        19.86         6.21        24.59        44.55        12.39 
TCGA-13-0726 TCGA-13-0727 TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 
       31.07        15.19         2.47        11.18        11.38        11.54 
TCGA-13-0761 TCGA-13-0764 TCGA-13-0766 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 
       34.06        31.04        21.40        38.93        36.72        28.70 
TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0801 TCGA-13-0802 
       30.35        19.56         8.71         7.79         8.28         8.19 
TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 TCGA-13-0887 
       35.28        35.28        13.61        68.91       107.18        66.64 
TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0893 TCGA-13-0897 
       70.39        61.81        67.99        69.01        43.36        57.47 
TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 
       57.07        19.36        47.38        48.33        47.84        44.94 
TCGA-13-0910 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0920 TCGA-13-1407 
       37.08        34.06        29.98        21.14        13.81         6.05 
TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 
        5.92         6.84         4.70        54.61        87.06        61.71 
TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 TCGA-13-1491 TCGA-13-1494 
       98.04        20.68        22.39        70.82        52.44        38.17 
TCGA-13-1495 TCGA-13-1497 TCGA-13-1500 TCGA-13-1501 TCGA-13-1505 TCGA-13-1506 
       49.22        54.31        13.97        32.84         4.21         4.41 
TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 TCGA-13-2059 
        4.14         2.56         3.88         3.09        14.24        12.23 
TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 
        8.75         6.28        23.05        25.94        26.20        72.20 
TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 
       27.48        25.38        19.07        16.67         2.93         2.66 
TCGA-23-1021 TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1028 
       47.54        42.51        40.54        15.39        26.83        49.41 
TCGA-23-1029 TCGA-23-1031 TCGA-23-1109 TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 
        8.81        18.87        51.35         3.22        31.20        68.68 
TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1121 TCGA-23-1122 TCGA-23-1809 
        4.57        33.30        86.01         6.38        39.09         0.53 
TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 
      115.89        87.48        91.66        77.00        49.84         2.76 
TCGA-23-2645 TCGA-24-0970 TCGA-24-0975 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 
        4.50        11.64        21.80         7.66        22.32        54.08 
TCGA-24-1104 TCGA-24-1105 TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 
       63.55        47.41         6.38         7.82         7.99         7.86 
TCGA-24-1422 TCGA-24-1423 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 
        0.76         6.25         5.95         5.36         4.80        17.36 
TCGA-24-1430 TCGA-24-1431 TCGA-24-1435 TCGA-24-1436 TCGA-24-1466 TCGA-24-1467 
       28.34        19.17        43.53         8.55        45.14       105.99 
TCGA-24-1469 TCGA-24-1471 TCGA-24-1474 TCGA-24-1545 TCGA-24-1546 TCGA-24-1548 
        9.11         1.18        22.19        57.37        64.27        16.21 
TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 
       41.06        51.91        41.39        58.09        88.50        70.62 
TCGA-24-1557 TCGA-24-1558 TCGA-24-1562 TCGA-24-1563 TCGA-24-1567 TCGA-24-1603 
       39.88        19.53        45.50        47.70        17.23        90.15 
TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 
       88.34        48.33        38.24         8.32         3.48         3.72 
TCGA-24-1845 TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 
        3.81        11.28         5.75         5.49         9.80        22.65 
TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 TCGA-24-1930 TCGA-24-2020 TCGA-24-2023 
       30.21        16.41        11.05        81.11       151.99        44.84 
TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 
      109.68        14.43        53.95        18.48        28.18        64.01 
TCGA-24-2038 TCGA-24-2254 TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 
       44.48        57.07         0.79         0.36        47.54        31.63 
TCGA-24-2280 TCGA-24-2281 TCGA-24-2289 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 
       70.45        44.58        67.36        16.64        33.11        55.86 
TCGA-25-1312 TCGA-25-1314 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 
        1.02        31.99        34.98        65.00        36.95        33.96 
TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 
        2.99        12.00         2.96        18.58        18.02        15.78 
TCGA-25-1631 TCGA-25-2042 TCGA-25-2391 TCGA-25-2397 TCGA-25-2398 TCGA-25-2401 
        0.30        13.02        49.05        12.00        45.01         2.96 
TCGA-25-2408 TCGA-29-1688 TCGA-29-1690 TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 
       30.97        78.87        44.71       101.75        38.53         0.79 
TCGA-29-1698 TCGA-29-1702 TCGA-29-1703 TCGA-29-1711 TCGA-29-1762 TCGA-29-1764 
       68.28        18.64        59.67        34.62        85.68        62.93 
TCGA-29-1766 TCGA-29-1768 TCGA-29-1770 TCGA-29-1775 TCGA-29-1776 TCGA-29-1777 
       39.09        31.23        24.36        12.36        11.84        12.30 
TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 
        8.35         7.20         5.36        34.62        86.17        65.00 
TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 
        4.87        42.25        11.84        11.47         9.76        38.07 
TCGA-30-1718 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 
       51.91         2.47        15.68         0.26        48.07        44.91 
TCGA-30-1862 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 TCGA-30-1892 TCGA-31-1944 
        6.08         1.18        57.57        24.26        48.79        45.57 
TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 
       30.18        18.77        22.45        21.53        22.85        22.55 
TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 TCGA-36-2529 TCGA-36-2532 TCGA-36-2534 
       25.74        27.85        24.23        35.05        29.49        29.79 
TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 
       23.80        21.60         2.24        20.98        18.31        20.52 
TCGA-36-2549 TCGA-36-2552 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 TCGA-42-2589 
        6.05        11.47        26.04        23.74         9.44         7.56 
TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 TCGA-57-1586 
        7.46        22.39         1.48        24.03        11.38        22.32 
TCGA-57-1992 TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 
       28.96        25.02       180.16        80.12        22.32       116.12 
TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-61-1721 TCGA-61-1724 
        9.40        34.39         2.14         5.39        11.11        20.94 
TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 TCGA-61-1730 TCGA-61-1734 TCGA-61-1736 
       31.40        18.54        27.88         4.34        28.47        48.79 
TCGA-61-1737 TCGA-61-1738 TCGA-61-1743 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 
       44.84        35.80        43.69         1.41         8.42         5.79 
TCGA-61-1901 TCGA-61-1904 TCGA-61-1906 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 
       11.41         9.07        34.13        37.02        42.48        48.92 
TCGA-61-1914 TCGA-61-1918 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2003 
       56.58        15.75         1.97         5.52        14.50         3.98 
TCGA-61-2008 TCGA-61-2009 TCGA-61-2018 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 
       30.61        39.85        45.40        51.72        71.74        61.64 
TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2104 TCGA-61-2109 
       58.39        60.62        65.49        55.50        76.83        20.68 
TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 
       44.52       125.72        22.22         6.35        31.07 

  19P LOSS MUTATED 19P LOSS WILD-TYPE 
              0.36               0.26 
  19P LOSS MUTATED 19P LOSS WILD-TYPE 
            129.96             180.16 
  19P LOSS MUTATED 19P LOSS WILD-TYPE 
            28.865             27.880 
[1] "0.4 - 130.0 (28.9)" "0.3 - 180.2 (27.9)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-2614 
  "19P LOSS MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-2614 
  "19P LOSS MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "19P LOSS MUTATED"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "19P LOSS MUTATED" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE"   "19P LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "19P LOSS MUTATED"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED"   "19P LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"19P LOSS WILD-TYPE"   "19P LOSS MUTATED" "19P LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" "19P LOSS WILD-TYPE" 
        TCGA-61-2614 
  "19P LOSS MUTATED" 
[1] "hr=" "1.1"
D74V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  19P LOSS MUTATED         1   177                0
  19P LOSS WILD-TYPE       1   371                2
D74V3, multiclass
                  clus
vv                 19P LOSS MUTATED 19P LOSS WILD-TYPE
  OMENTUM                         1                  1
  OVARY                         177                371
  PERITONEUM OVARY                0                  2
D74V4, continuous
D74V5, binary
                    cls
clus                   0   1
  19P LOSS MUTATED     1 180
  19P LOSS WILD-TYPE   2 379
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  19P LOSS MUTATED      1  180
  19P LOSS WILD-TYPE    2  379
     clus
vv    19P LOSS MUTATED 19P LOSS WILD-TYPE
  NO                 1                  2
  YES              180                379
                    vv
clus                 R0 R1 R2
  19P LOSS MUTATED    3 10  0
  19P LOSS WILD-TYPE 11 16  2
D74V6, multiclass
    clus
vv   19P LOSS MUTATED 19P LOSS WILD-TYPE
  R0                3                 11
  R1               10                 16
  R2                0                  2

Clustering(75) Variable = 19Q LOSS MUTATION ANALYSIS
D75V1, survival
                    sevent
clus2                  0   1
  19Q LOSS MUTATED    80  86
  19Q LOSS WILD-TYPE 181 200
  19Q LOSS MUTATED 19Q LOSS WILD-TYPE 
               166                381 
  19Q LOSS MUTATED 19Q LOSS WILD-TYPE 
                86                200 
$`19Q LOSS MUTATED`
TCGA-04-1347 TCGA-04-1349 TCGA-04-1350 TCGA-04-1356 TCGA-04-1362 TCGA-04-1364 
       63.06        21.57        63.98        49.28        44.32        33.67 
TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1530 TCGA-04-1638 TCGA-04-1644 
       76.54        71.47        82.36       119.08        55.40        48.89 
TCGA-04-1646 TCGA-04-1654 TCGA-04-1655 TCGA-09-0366 TCGA-09-1659 TCGA-09-1661 
       27.88        47.70        45.34        57.73         9.96        38.43 
TCGA-09-1664 TCGA-09-1667 TCGA-09-1668 TCGA-09-1672 TCGA-09-1673 TCGA-09-1675 
       74.89        61.87        55.36         5.85         3.02        97.55 
TCGA-09-2049 TCGA-09-2051 TCGA-09-2053 TCGA-09-2055 TCGA-09-2056 TCGA-10-0928 
      112.37        63.09        39.75        26.93        12.46        18.48 
TCGA-10-0930 TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 TCGA-13-0723 TCGA-13-0724 
       33.24        35.80        15.12        19.86        39.58         2.73 
TCGA-13-0751 TCGA-13-0762 TCGA-13-0768 TCGA-13-0800 TCGA-13-0803 TCGA-13-0804 
       55.17        32.25         8.42         8.12        43.82        35.28 
TCGA-13-0886 TCGA-13-0899 TCGA-13-0908 TCGA-13-0911 TCGA-13-0919 TCGA-13-0921 
       74.27        56.15        44.84        27.68        14.89         4.64 
TCGA-13-0923 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 TCGA-13-1411 
        6.41        10.88         6.61         7.36         6.05         4.21 
TCGA-13-1412 TCGA-13-1489 TCGA-13-1494 TCGA-13-1496 TCGA-13-1498 TCGA-13-1499 
        5.33        82.88        38.17         4.24        37.61        38.37 
TCGA-13-1510 TCGA-13-2060 TCGA-13-2061 TCGA-23-1021 TCGA-23-1024 TCGA-23-1030 
        2.56         8.58        10.78        47.54        15.39        29.10 
TCGA-23-1032 TCGA-23-1110 TCGA-23-1119 TCGA-23-1120 TCGA-23-1123 TCGA-23-1124 
        2.24        54.51       129.96         4.27        33.47        58.13 
TCGA-23-2072 TCGA-23-2643 TCGA-24-0966 TCGA-24-0968 TCGA-24-0979 TCGA-24-0980 
       24.95         4.70         7.63        19.63        41.56         7.66 
TCGA-24-0982 TCGA-24-1413 TCGA-24-1424 TCGA-24-1434 TCGA-24-1463 TCGA-24-1464 
       22.32         6.31         6.02        18.67        72.92        12.46 
TCGA-24-1467 TCGA-24-1470 TCGA-24-1549 TCGA-24-1560 TCGA-24-1564 TCGA-24-1565 
      105.99         3.42        56.58        44.09        25.87        10.26 
TCGA-24-1846 TCGA-24-2019 TCGA-24-2024 TCGA-24-2026 TCGA-24-2260 TCGA-24-2290 
        4.37         4.87        58.16        34.82        36.16        36.23 
TCGA-24-2293 TCGA-24-2298 TCGA-25-1315 TCGA-25-1316 TCGA-25-1627 TCGA-25-1628 
       16.64        53.26        51.06        37.02         0.36        20.58 
TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 
       56.94        60.59        35.54        51.22        14.93        24.99 
TCGA-25-1877 TCGA-25-1878 TCGA-25-2392 TCGA-25-2393 TCGA-25-2396 TCGA-25-2399 
       18.05        85.05         1.02        38.04         3.02        19.99 
TCGA-25-2400 TCGA-25-2409 TCGA-29-1694 TCGA-29-1696 TCGA-29-1697 TCGA-29-1699 
       42.02        26.96        38.53        33.70        31.17         0.53 
TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1761 TCGA-29-1763 TCGA-29-1769 
       18.25        41.95        29.23        17.00        66.77        22.98 
TCGA-29-1771 TCGA-29-1778 TCGA-29-2427 TCGA-29-2428 TCGA-30-1853 TCGA-30-1861 
       22.52        14.93        62.47        45.11        36.26        34.78 
TCGA-30-1866 TCGA-30-1891 TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-36-1568 
       36.62        30.05         6.71        42.51        44.09        28.73 
TCGA-36-1569 TCGA-36-1575 TCGA-36-1576 TCGA-36-1580 TCGA-36-1581 TCGA-36-2530 
       29.06         8.55        30.05        24.23        24.69        33.01 
TCGA-36-2537 TCGA-36-2538 TCGA-36-2548 TCGA-36-2551 TCGA-57-1584 TCGA-57-1585 
       25.91        25.08        14.17        16.14        21.14         1.74 
TCGA-57-1993 TCGA-59-2372 TCGA-61-1725 TCGA-61-1733 TCGA-61-1903 TCGA-61-1907 
       25.05        44.78        31.40        31.76        13.02        31.30 
TCGA-61-1915 TCGA-61-1917 TCGA-61-1919 TCGA-61-2002 TCGA-61-2016 TCGA-61-2017 
       67.73        43.43        38.17        17.98         1.18        45.96 
TCGA-61-2087 TCGA-61-2088 TCGA-61-2102 TCGA-61-2614 
        4.80         4.77         6.48         8.58 

$`19Q LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 
       40.24        41.00         1.81        49.15         2.01        46.62 
TCGA-04-1342 TCGA-04-1343 TCGA-04-1346 TCGA-04-1348 TCGA-04-1351 TCGA-04-1361 
       18.51        11.87        65.49        48.76        65.46        32.52 
TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 TCGA-04-1536 TCGA-04-1542 
       56.55        41.59        19.99        38.37        29.06        84.20 
TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 TCGA-09-0364 TCGA-09-0365 
       28.64        64.64        36.23        31.86        29.16         9.47 
TCGA-09-0367 TCGA-09-0369 TCGA-09-1662 TCGA-09-1665 TCGA-09-1666 TCGA-09-1669 
       17.95        35.54        89.33        41.59        57.57        30.48 
TCGA-09-1670 TCGA-09-1674 TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 
       17.98         8.55         6.15         6.12        35.15         4.50 
TCGA-09-2050 TCGA-09-2054 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0931 
       71.11        20.91        54.31        25.91        81.47        32.28 
TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 
       11.70         3.88        35.41         6.21        24.59        44.55 
TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0755 TCGA-13-0757 
       12.39        31.07        15.19        17.79         2.47        11.18 
TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 TCGA-13-0764 TCGA-13-0766 TCGA-13-0791 
       11.38        11.54        34.06        31.04        21.40        38.93 
TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 
       36.72        28.70        30.35        19.56         8.71         7.79 
TCGA-13-0801 TCGA-13-0802 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 
        8.28         8.19        35.28        13.61        68.91       107.18 
TCGA-13-0885 TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 
       91.40        66.64        70.39        61.81        67.99        69.01 
TCGA-13-0893 TCGA-13-0897 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 
       43.36        57.47        57.07        19.36        47.38        48.33 
TCGA-13-0905 TCGA-13-0906 TCGA-13-0910 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 
       47.84        44.94        37.08        34.06        29.98        21.14 
TCGA-13-0920 TCGA-13-0924 TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 TCGA-13-1477 
       13.81         6.08         5.92         6.84         4.70        54.61 
TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 
       87.06        61.71        29.39        98.04        20.68        22.39 
TCGA-13-1488 TCGA-13-1491 TCGA-13-1492 TCGA-13-1495 TCGA-13-1497 TCGA-13-1500 
       70.82        52.44        73.55        49.22        54.31        13.97 
TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 
       32.84        16.57         4.21         4.41         4.77         4.14 
TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 TCGA-13-2059 TCGA-13-2065 TCGA-13-2071 
        3.88         3.09        14.24        12.23         8.75         6.28 
TCGA-20-0987 TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1682 TCGA-20-1683 
       23.05        25.94        26.20        72.20        27.48        25.38 
TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1022 TCGA-23-1023 
       19.07        16.67         2.93         2.66        42.51        40.54 
TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 TCGA-23-1031 TCGA-23-1109 
       26.83        31.73        49.41         8.81        18.87        51.35 
TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 
        3.22        31.20        68.68         4.57        33.30        86.01 
TCGA-23-1121 TCGA-23-1122 TCGA-23-1809 TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 
        6.38        39.09         0.53       115.89        87.48        91.66 
TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2645 TCGA-24-0970 TCGA-24-0975 
       77.00        49.84         2.76         4.50        11.64        21.80 
TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 
       54.08        63.55        47.41         6.38         7.82         7.99 
TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 
        7.86         0.76         6.25         5.95         5.36         4.80 
TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 TCGA-24-1435 TCGA-24-1436 TCGA-24-1466 
       17.36        28.34        19.17        43.53         8.55        45.14 
TCGA-24-1469 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 
        9.11         1.18        22.19        26.96        57.37        64.27 
TCGA-24-1548 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 TCGA-24-1553 TCGA-24-1555 
       16.21        41.06        51.91        41.39        58.09        88.50 
TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 TCGA-24-1562 TCGA-24-1563 TCGA-24-1567 
       70.62        39.88        19.53        45.50        47.70        17.23 
TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 
       90.15        88.34        48.33        38.24         8.32         3.48 
TCGA-24-1844 TCGA-24-1845 TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 
        3.72         3.81        11.28         5.75         5.49         9.80 
TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 TCGA-24-1930 TCGA-24-2020 
       22.65        30.21        16.41        11.05        81.11       151.99 
TCGA-24-2023 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 
       44.84       109.68        14.43        53.95        18.48        28.18 
TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 
       64.01        44.48        57.07         0.79         0.36        47.54 
TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 TCGA-24-2295 
       31.63        70.45        44.58         0.82        67.36        33.11 
TCGA-24-2297 TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 TCGA-25-1317 TCGA-25-1318 
       55.86         1.02        26.93        31.99         1.02        34.98 
TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 
       65.00        36.95        33.96         2.99        12.00         2.96 
TCGA-25-1623 TCGA-25-1625 TCGA-25-1626 TCGA-25-1630 TCGA-25-1631 TCGA-25-2042 
       18.58        18.02        15.78         7.86         0.30        13.02 
TCGA-25-2391 TCGA-25-2397 TCGA-25-2398 TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 
       49.05        12.00        45.01         2.96        29.00        30.97 
TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 TCGA-29-1693 TCGA-29-1695 TCGA-29-1698 
       78.87        44.71        47.18       101.75         0.79        68.28 
TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1711 TCGA-29-1762 TCGA-29-1764 
       16.90        18.64        59.67        34.62        85.68        62.93 
TCGA-29-1766 TCGA-29-1768 TCGA-29-1770 TCGA-29-1774 TCGA-29-1775 TCGA-29-1776 
       39.09        31.23        24.36        17.29        12.36        11.84 
TCGA-29-1777 TCGA-29-1781 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 
       12.30         8.35         7.20         5.36        34.62        86.17 
TCGA-29-2425 TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 TCGA-29-2434 TCGA-29-2436 
       65.00         4.87        42.25        11.84        11.47         9.76 
TCGA-30-1714 TCGA-30-1718 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 
       38.07        51.91         2.47        15.68         0.26        48.07 
TCGA-30-1860 TCGA-30-1862 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 TCGA-30-1892 
       44.91         6.08         1.18        57.57        24.26        48.79 
TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 TCGA-31-1959 TCGA-36-1570 
       45.57        30.18        18.77        22.45         2.17        21.53 
TCGA-36-1571 TCGA-36-1574 TCGA-36-1577 TCGA-36-1578 TCGA-36-2529 TCGA-36-2532 
       22.85        22.55        25.74        27.85        35.05        29.49 
TCGA-36-2534 TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 
       29.79        23.80        21.60         2.24        20.98        18.31 
TCGA-36-2547 TCGA-36-2549 TCGA-36-2552 TCGA-42-2582 TCGA-42-2587 TCGA-42-2588 
       20.52         6.05        11.47        26.04        23.74         9.44 
TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 
        7.56         7.46        22.39         1.48        24.03        11.38 
TCGA-57-1586 TCGA-57-1992 TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 
       22.32        28.96        25.02       180.16        80.12        22.32 
TCGA-59-2351 TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-61-1721 
      116.12         9.40        34.39         2.14         5.39        11.11 
TCGA-61-1722 TCGA-61-1724 TCGA-61-1727 TCGA-61-1728 TCGA-61-1730 TCGA-61-1734 
        8.05        20.94        18.54        27.88         4.34        28.47 
TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 
       48.79        44.84        35.80         2.43        33.67        43.69 
TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1904 TCGA-61-1906 
        1.41         8.42         5.79        11.41         9.07        34.13 
TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1918 TCGA-61-1995 
       37.02        42.48        48.92        56.58        15.75         1.97 
TCGA-61-1998 TCGA-61-2000 TCGA-61-2003 TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 
        5.52        14.50         3.98        30.61        39.85        30.64 
TCGA-61-2018 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 
       45.40        51.72        71.74        61.64        58.39        60.62 
TCGA-61-2098 TCGA-61-2101 TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 
       65.49        55.50        76.83        20.68        44.52       125.72 
TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 
       22.22         6.35        31.07 

  19Q LOSS MUTATED 19Q LOSS WILD-TYPE 
              0.36               0.26 
  19Q LOSS MUTATED 19Q LOSS WILD-TYPE 
            129.96             180.16 
  19Q LOSS MUTATED 19Q LOSS WILD-TYPE 
             29.64              26.96 
[1] "0.4 - 130.0 (29.6)" "0.3 - 180.2 (27.0)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-2614 
  "19Q LOSS MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-2614 
  "19Q LOSS MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "19Q LOSS MUTATED"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED"   "19Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"19Q LOSS WILD-TYPE"   "19Q LOSS MUTATED" "19Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" "19Q LOSS WILD-TYPE" 
        TCGA-61-2614 
  "19Q LOSS MUTATED" 
[1] "hr=" "1"  
D75V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  19Q LOSS MUTATED         2   165                0
  19Q LOSS WILD-TYPE       0   383                2
D75V3, multiclass
                  clus
vv                 19Q LOSS MUTATED 19Q LOSS WILD-TYPE
  OMENTUM                         2                  0
  OVARY                         165                383
  PERITONEUM OVARY                0                  2
D75V4, continuous
D75V5, binary
                    cls
clus                   0   1
  19Q LOSS MUTATED     0 170
  19Q LOSS WILD-TYPE   3 389
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  19Q LOSS MUTATED      0  170
  19Q LOSS WILD-TYPE    3  389
     clus
vv    19Q LOSS MUTATED 19Q LOSS WILD-TYPE
  NO                 0                  3
  YES              170                389
                    vv
clus                 R0 R1 R2
  19Q LOSS MUTATED    2 10  0
  19Q LOSS WILD-TYPE 12 16  2
D75V6, multiclass
    clus
vv   19Q LOSS MUTATED 19Q LOSS WILD-TYPE
  R0                2                 12
  R1               10                 16
  R2                0                  2

Clustering(76) Variable = 20P LOSS MUTATION ANALYSIS
D76V1, survival
                    sevent
clus2                  0   1
  20P LOSS MUTATED    29  20
  20P LOSS WILD-TYPE 232 266
  20P LOSS MUTATED 20P LOSS WILD-TYPE 
                49                498 
  20P LOSS MUTATED 20P LOSS WILD-TYPE 
                20                266 
$`20P LOSS MUTATED`
TCGA-04-1336 TCGA-04-1536 TCGA-09-0364 TCGA-09-1667 TCGA-09-2048 TCGA-10-0930 
       49.15        29.06        29.16        61.87         4.50        33.24 
TCGA-13-0720 TCGA-13-0804 TCGA-13-0883 TCGA-13-0893 TCGA-13-0921 TCGA-13-1489 
       44.55        35.28        68.91        43.36         4.64        82.88 
TCGA-13-1494 TCGA-13-1495 TCGA-13-2059 TCGA-13-2071 TCGA-20-0987 TCGA-20-1682 
       38.17        49.22        12.23         6.28        23.05        27.48 
TCGA-20-1687 TCGA-23-1022 TCGA-23-1028 TCGA-23-1118 TCGA-23-1119 TCGA-23-2072 
        2.66        42.51        49.41        86.01       129.96        24.95 
TCGA-24-0975 TCGA-24-1417 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1463 
       21.80         7.82         5.36         4.80        17.36        72.92 
TCGA-24-1471 TCGA-24-1552 TCGA-24-1603 TCGA-24-1614 TCGA-24-2298 TCGA-25-2392 
        1.18        41.39        90.15        48.33        53.26         1.02 
TCGA-29-1693 TCGA-29-1702 TCGA-29-1711 TCGA-29-1781 TCGA-29-2434 TCGA-29-2436 
      101.75        18.64        34.62         8.35        11.47         9.76 
TCGA-36-1577 TCGA-36-1578 TCGA-61-1725 TCGA-61-1734 TCGA-61-1737 TCGA-61-1741 
       25.74        27.85        31.40        28.47        44.84        33.67 
TCGA-61-2088 
        4.77 

$`20P LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1337 TCGA-04-1338 TCGA-04-1342 
       40.24        41.00         1.81         2.01        46.62        18.51 
TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 
       11.87        65.49        63.06        48.76        21.57        63.98 
TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 
       65.46        49.28        32.52        44.32        33.67        76.54 
TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 
       71.47        82.36        56.55        41.59        19.99        38.37 
TCGA-04-1530 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 TCGA-04-1648 
      119.08        84.20        55.40        48.89        27.88        28.64 
TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 TCGA-04-1655 TCGA-09-0365 
       64.64        36.23        31.86        47.70        45.34         9.47 
TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 
       57.73        17.95        35.54         9.96        38.43        89.33 
TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1668 TCGA-09-1669 TCGA-09-1670 
       74.89        41.59        57.57        55.36        30.48        17.98 
TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 TCGA-09-2043 TCGA-09-2044 
        5.85         3.02         8.55        97.55         6.15         6.12 
TCGA-09-2045 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 
       35.15       112.37        71.11        63.09        39.75        20.91 
TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 
       26.93        12.46        54.31        25.91        81.47        18.48 
TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-10-0937 
       32.28        11.70         3.88        35.41        35.80        15.12 
TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0723 TCGA-13-0724 TCGA-13-0725 
       19.86         6.21        24.59        39.58         2.73        12.39 
TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 TCGA-13-0757 
       31.07        15.19        17.79        55.17         2.47        11.18 
TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 TCGA-13-0762 TCGA-13-0764 TCGA-13-0766 
       11.38        11.54        34.06        32.25        31.04        21.40 
TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 
        8.42        38.93        36.72        28.70        30.35        19.56 
TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 
        8.71         7.79         8.12         8.28         8.19        43.82 
TCGA-13-0805 TCGA-13-0807 TCGA-13-0884 TCGA-13-0885 TCGA-13-0886 TCGA-13-0887 
       35.28        13.61       107.18        91.40        74.27        66.64 
TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 TCGA-13-0897 TCGA-13-0899 
       70.39        61.81        67.99        69.01        57.47        56.15 
TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 
       57.07        19.36        47.38        48.33        47.84        44.94 
TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 
       44.84        37.08        27.68        34.06        29.98        21.14 
TCGA-13-0919 TCGA-13-0920 TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 
       14.89        13.81         6.41         6.08        10.88         6.61 
TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 TCGA-13-1411 
        7.36         6.05         5.92         6.84         4.70         4.21 
TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 
        5.33        54.61        87.06        61.71        29.39        98.04 
TCGA-13-1485 TCGA-13-1487 TCGA-13-1488 TCGA-13-1491 TCGA-13-1492 TCGA-13-1496 
       20.68        22.39        70.82        52.44        73.55         4.24 
TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 
       54.31        37.61        38.37        13.97        32.84        16.57 
TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 
        4.21         4.41         4.77         4.14         2.56         3.88 
TCGA-13-1512 TCGA-13-2057 TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 TCGA-20-0990 
        3.09        14.24         8.58        10.78         8.75        25.94 
TCGA-20-0991 TCGA-20-0996 TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 
       26.20        72.20        25.38        19.07        16.67         2.93 
TCGA-23-1021 TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1029 
       47.54        40.54        15.39        26.83        31.73         8.81 
TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 
       29.10        18.87         2.24        51.35        54.51         3.22 
TCGA-23-1113 TCGA-23-1114 TCGA-23-1116 TCGA-23-1117 TCGA-23-1120 TCGA-23-1121 
       31.20        68.68         4.57        33.30         4.27         6.38 
TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 TCGA-23-2077 TCGA-23-2078 
       39.09        33.47        58.13         0.53       115.89        87.48 
TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 TCGA-23-2643 TCGA-23-2645 
       91.66        77.00        49.84         2.76         4.70         4.50 
TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 
        7.63        19.63        11.64        41.56         7.66        22.32 
TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1418 
       54.08        63.55        47.41         6.31         6.38         7.99 
TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 TCGA-24-1430 
        7.86         0.76         6.25         6.02         5.95        28.34 
TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 TCGA-24-1464 TCGA-24-1466 
       19.17        18.67        43.53         8.55        12.46        45.14 
TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 
      105.99         9.11         3.42        22.19        26.96        57.37 
TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1553 
       64.27        16.21        56.58        41.06        51.91        58.09 
TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 
       88.50        70.62        39.88        19.53        44.09        45.50 
TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 TCGA-24-1604 TCGA-24-1616 
       47.70        25.87        10.26        17.23        88.34        38.24 
TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 TCGA-24-1845 TCGA-24-1846 TCGA-24-1847 
        8.32         3.48         3.72         3.81         4.37        11.28 
TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 
        5.75         5.49         9.80        22.65        30.21        16.41 
TCGA-24-1928 TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 TCGA-24-2024 
       11.05        81.11         4.87       151.99        44.84        58.16 
TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2035 
       34.82       109.68        14.43        53.95        18.48        28.18 
TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 TCGA-24-2262 
       64.01        44.48        57.07        36.16         0.79         0.36 
TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 
       47.54        31.63        70.45        44.58         0.82        67.36 
TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 TCGA-25-1312 TCGA-25-1313 
       36.23        16.64        33.11        55.86         1.02        26.93 
TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 
       31.99        51.06        37.02         1.02        34.98        65.00 
TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 
       36.95        33.96         2.99        12.00         2.96        18.58 
TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 TCGA-25-1630 TCGA-25-1631 
       18.02        15.78         0.36        20.58         7.86         0.30 
TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 
       56.94        60.59        35.54        51.22        14.93        24.99 
TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2393 TCGA-25-2396 
       18.05        85.05        13.02        49.05        38.04         3.02 
TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 
       12.00        45.01        19.99        42.02         2.96        29.00 
TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 TCGA-29-1694 
       30.97        26.96        78.87        44.71        47.18        38.53 
TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 TCGA-29-1701 
        0.79        33.70        31.17        68.28         0.53        16.90 
TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 TCGA-29-1761 TCGA-29-1762 
       59.67        18.25        41.95        29.23        17.00        85.68 
TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 TCGA-29-1769 TCGA-29-1770 
       66.77        62.93        39.09        31.23        22.98        24.36 
TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 TCGA-29-1776 TCGA-29-1777 TCGA-29-1778 
       22.52        17.29        12.36        11.84        12.30        14.93 
TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 
        7.20         5.36        34.62        86.17        65.00        62.47 
TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 TCGA-30-1714 TCGA-30-1718 
       45.11         4.87        42.25        11.84        38.07        51.91 
TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 
       36.26         2.47        15.68         0.26        48.07        44.91 
TCGA-30-1861 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 
       34.78         6.08        36.62         1.18        57.57        24.26 
TCGA-30-1891 TCGA-30-1892 TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 
       30.05        48.79        45.57        30.18        18.77        22.45 
TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1569 
        6.71        42.51        44.09         2.17        28.73        29.06 
TCGA-36-1570 TCGA-36-1571 TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 TCGA-36-1580 
       21.53        22.85        22.55         8.55        30.05        24.23 
TCGA-36-1581 TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 
       24.69        35.05        33.01        29.49        29.79        25.91 
TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 
       25.08        23.80        21.60         2.24        20.98        18.31 
TCGA-36-2547 TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 TCGA-36-2552 TCGA-42-2582 
       20.52        14.17         6.05        16.14        11.47        26.04 
TCGA-42-2587 TCGA-42-2588 TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 
       23.74         9.44         7.56         7.46        22.39         1.48 
TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 
       24.03        11.38        21.14         1.74        22.32        28.96 
TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 
       25.05        25.02       180.16        80.12        22.32       116.12 
TCGA-59-2352 TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 
        9.40        34.39         2.14         5.39        44.78        11.11 
TCGA-61-1722 TCGA-61-1724 TCGA-61-1727 TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 
        8.05        20.94        18.54        27.88         4.34        31.76 
TCGA-61-1736 TCGA-61-1738 TCGA-61-1740 TCGA-61-1743 TCGA-61-1895 TCGA-61-1899 
       48.79        35.80         2.43        43.69         1.41         8.42 
TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 TCGA-61-1907 
        5.79        11.41        13.02         9.07        34.13        31.30 
TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 TCGA-61-1915 TCGA-61-1917 
       37.02        42.48        48.92        56.58        67.73        43.43 
TCGA-61-1918 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 
       15.75        38.17         1.97         5.52        14.50        17.98 
TCGA-61-2003 TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 TCGA-61-2017 
        3.98        30.61        39.85        30.64         1.18        45.96 
TCGA-61-2018 TCGA-61-2087 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2096 
       45.40         4.80        51.72        71.74        61.64        58.39 
TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 TCGA-61-2109 
       60.62        65.49        55.50         6.48        76.83        20.68 
TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 TCGA-61-2614 
       44.52       125.72        22.22         6.35        31.07         8.58 

  20P LOSS MUTATED 20P LOSS WILD-TYPE 
              1.02               0.26 
  20P LOSS MUTATED 20P LOSS WILD-TYPE 
            129.96             180.16 
  20P LOSS MUTATED 20P LOSS WILD-TYPE 
             29.16              27.78 
[1] "1.0 - 130.0 (29.2)" "0.3 - 180.2 (27.8)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED"   "20P LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED"   "20P LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2614 
"20P LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED"   "20P LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED"   "20P LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2614 
"20P LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED"   "20P LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED"   "20P LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"20P LOSS WILD-TYPE"   "20P LOSS MUTATED" "20P LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "20P LOSS MUTATED" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE"   "20P LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2614 
"20P LOSS WILD-TYPE" 
[1] "hr=" "1.5"
D76V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  20P LOSS MUTATED         0    49                0
  20P LOSS WILD-TYPE       2   499                2
D76V3, multiclass
                  clus
vv                 20P LOSS MUTATED 20P LOSS WILD-TYPE
  OMENTUM                         0                  2
  OVARY                          49                499
  PERITONEUM OVARY                0                  2
D76V4, continuous
D76V5, binary
                    cls
clus                   0   1
  20P LOSS MUTATED     1  49
  20P LOSS WILD-TYPE   2 510
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  20P LOSS MUTATED      1   49
  20P LOSS WILD-TYPE    2  510
     clus
vv    20P LOSS MUTATED 20P LOSS WILD-TYPE
  NO                 1                  2
  YES               49                510
                    vv
clus                 R0 R1 R2
  20P LOSS MUTATED    2  0  0
  20P LOSS WILD-TYPE 12 26  2
D76V6, multiclass
[1] "Remove cluster labels:" "20P LOSS MUTATED"      
clus
  20P LOSS MUTATED 20P LOSS WILD-TYPE 
                 2                 40 
        TCGA-04-1516         TCGA-04-1644         TCGA-13-0807 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-24-2033         TCGA-29-2414 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-2425         TCGA-29-2427         TCGA-29-2428 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-29-2429         TCGA-29-2431         TCGA-29-2432 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-42-2593         TCGA-57-1993         TCGA-59-2363 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-2612         TCGA-61-2613 
"20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" "20P LOSS WILD-TYPE" 
        TCGA-61-2614 
"20P LOSS WILD-TYPE" 

Clustering(77) Variable = 20Q LOSS MUTATION ANALYSIS
D77V1, survival
                    sevent
clus2                  0   1
  20Q LOSS MUTATED    17  13
  20Q LOSS WILD-TYPE 244 273
  20Q LOSS MUTATED 20Q LOSS WILD-TYPE 
                30                517 
  20Q LOSS MUTATED 20Q LOSS WILD-TYPE 
                13                273 
$`20Q LOSS MUTATED`
TCGA-04-1336 TCGA-09-1667 TCGA-09-2048 TCGA-10-0930 TCGA-13-0720 TCGA-13-0804 
       49.15        61.87         4.50        33.24        44.55        35.28 
TCGA-13-0883 TCGA-13-1489 TCGA-13-1494 TCGA-13-1495 TCGA-13-2059 TCGA-20-0987 
       68.91        82.88        38.17        49.22        12.23        23.05 
TCGA-23-1028 TCGA-23-1118 TCGA-23-1119 TCGA-23-2072 TCGA-24-1428 TCGA-24-1463 
       49.41        86.01       129.96        24.95        17.36        72.92 
TCGA-24-1471 TCGA-24-1552 TCGA-24-1614 TCGA-24-2030 TCGA-24-2298 TCGA-25-2392 
        1.18        41.39        48.33        53.95        53.26         1.02 
TCGA-29-1711 TCGA-29-1781 TCGA-36-1578 TCGA-61-1734 TCGA-61-2002 TCGA-61-2088 
       34.62         8.35        27.85        28.47        17.98         4.77 

$`20Q LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1335 TCGA-04-1337 TCGA-04-1338 TCGA-04-1342 
       40.24        41.00         1.81         2.01        46.62        18.51 
TCGA-04-1343 TCGA-04-1346 TCGA-04-1347 TCGA-04-1348 TCGA-04-1349 TCGA-04-1350 
       11.87        65.49        63.06        48.76        21.57        63.98 
TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 
       65.46        49.28        32.52        44.32        33.67        76.54 
TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 
       71.47        82.36        56.55        41.59        19.99        38.37 
TCGA-04-1530 TCGA-04-1536 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 
      119.08        29.06        84.20        55.40        48.89        27.88 
TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 TCGA-04-1655 
       28.64        64.64        36.23        31.86        47.70        45.34 
TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 TCGA-09-1659 
       29.16         9.47        57.73        17.95        35.54         9.96 
TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 TCGA-09-1668 
       38.43        89.33        74.89        41.59        57.57        55.36 
TCGA-09-1669 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 
       30.48        17.98         5.85         3.02         8.55        97.55 
TCGA-09-2043 TCGA-09-2044 TCGA-09-2045 TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 
        6.15         6.12        35.15       112.37        71.11        63.09 
TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 TCGA-10-0926 
       39.75        20.91        26.93        12.46        54.31        25.91 
TCGA-10-0927 TCGA-10-0928 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 
       81.47        18.48        32.28        11.70         3.88        35.41 
TCGA-10-0936 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0723 
       35.80        15.12        19.86         6.21        24.59        39.58 
TCGA-13-0724 TCGA-13-0725 TCGA-13-0726 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 
        2.73        12.39        31.07        15.19        17.79        55.17 
TCGA-13-0755 TCGA-13-0757 TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 TCGA-13-0762 
        2.47        11.18        11.38        11.54        34.06        32.25 
TCGA-13-0764 TCGA-13-0766 TCGA-13-0768 TCGA-13-0791 TCGA-13-0792 TCGA-13-0793 
       31.04        21.40         8.42        38.93        36.72        28.70 
TCGA-13-0794 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 
       30.35        19.56         8.71         7.79         8.12         8.28 
TCGA-13-0802 TCGA-13-0803 TCGA-13-0805 TCGA-13-0807 TCGA-13-0884 TCGA-13-0885 
        8.19        43.82        35.28        13.61       107.18        91.40 
TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 
       74.27        66.64        70.39        61.81        67.99        69.01 
TCGA-13-0893 TCGA-13-0897 TCGA-13-0899 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 
       43.36        57.47        56.15        57.07        19.36        47.38 
TCGA-13-0904 TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 
       48.33        47.84        44.94        44.84        37.08        27.68 
TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 TCGA-13-0921 
       34.06        29.98        21.14        14.89        13.81         4.64 
TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1404 TCGA-13-1405 TCGA-13-1407 
        6.41         6.08        10.88         6.61         7.36         6.05 
TCGA-13-1408 TCGA-13-1409 TCGA-13-1410 TCGA-13-1411 TCGA-13-1412 TCGA-13-1477 
        5.92         6.84         4.70         4.21         5.33        54.61 
TCGA-13-1481 TCGA-13-1482 TCGA-13-1483 TCGA-13-1484 TCGA-13-1485 TCGA-13-1487 
       87.06        61.71        29.39        98.04        20.68        22.39 
TCGA-13-1488 TCGA-13-1491 TCGA-13-1492 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 
       70.82        52.44        73.55         4.24        54.31        37.61 
TCGA-13-1499 TCGA-13-1500 TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 
       38.37        13.97        32.84        16.57         4.21         4.41 
TCGA-13-1507 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 TCGA-13-1512 TCGA-13-2057 
        4.77         4.14         2.56         3.88         3.09        14.24 
TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 TCGA-13-2071 TCGA-20-0990 TCGA-20-0991 
        8.58        10.78         8.75         6.28        25.94        26.20 
TCGA-20-0996 TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 TCGA-20-1685 TCGA-20-1686 
       72.20        27.48        25.38        19.07        16.67         2.93 
TCGA-20-1687 TCGA-23-1021 TCGA-23-1022 TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 
        2.66        47.54        42.51        40.54        15.39        26.83 
TCGA-23-1027 TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 
       31.73         8.81        29.10        18.87         2.24        51.35 
TCGA-23-1110 TCGA-23-1111 TCGA-23-1113 TCGA-23-1114 TCGA-23-1116 TCGA-23-1117 
       54.51         3.22        31.20        68.68         4.57        33.30 
TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-1124 TCGA-23-1809 
        4.27         6.38        39.09        33.47        58.13         0.53 
TCGA-23-2077 TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 
      115.89        87.48        91.66        77.00        49.84         2.76 
TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 
        4.70         4.50         7.63        19.63        11.64        21.80 
TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 TCGA-24-1103 TCGA-24-1104 TCGA-24-1105 
       41.56         7.66        22.32        54.08        63.55        47.41 
TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 
        6.31         6.38         7.82         7.99         7.86         0.76 
TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1430 
        6.25         6.02         5.95         5.36         4.80        28.34 
TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 TCGA-24-1436 TCGA-24-1464 TCGA-24-1466 
       19.17        18.67        43.53         8.55        12.46        45.14 
TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1474 TCGA-24-1544 TCGA-24-1545 
      105.99         9.11         3.42        22.19        26.96        57.37 
TCGA-24-1546 TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1551 TCGA-24-1553 
       64.27        16.21        56.58        41.06        51.91        58.09 
TCGA-24-1555 TCGA-24-1556 TCGA-24-1557 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 
       88.50        70.62        39.88        19.53        44.09        45.50 
TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 TCGA-24-1603 TCGA-24-1604 
       47.70        25.87        10.26        17.23        90.15        88.34 
TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 TCGA-24-1845 TCGA-24-1846 
       38.24         8.32         3.48         3.72         3.81         4.37 
TCGA-24-1847 TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 
       11.28         5.75         5.49         9.80        22.65        30.21 
TCGA-24-1927 TCGA-24-1928 TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 
       16.41        11.05        81.11         4.87       151.99        44.84 
TCGA-24-2024 TCGA-24-2026 TCGA-24-2027 TCGA-24-2029 TCGA-24-2033 TCGA-24-2035 
       58.16        34.82       109.68        14.43        18.48        28.18 
TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 TCGA-24-2261 TCGA-24-2262 
       64.01        44.48        57.07        36.16         0.79         0.36 
TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2281 TCGA-24-2288 TCGA-24-2289 
       47.54        31.63        70.45        44.58         0.82        67.36 
TCGA-24-2290 TCGA-24-2293 TCGA-24-2295 TCGA-24-2297 TCGA-25-1312 TCGA-25-1313 
       36.23        16.64        33.11        55.86         1.02        26.93 
TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 
       31.99        51.06        37.02         1.02        34.98        65.00 
TCGA-25-1320 TCGA-25-1321 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 
       36.95        33.96         2.99        12.00         2.96        18.58 
TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1628 TCGA-25-1630 TCGA-25-1631 
       18.02        15.78         0.36        20.58         7.86         0.30 
TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 
       56.94        60.59        35.54        51.22        14.93        24.99 
TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2393 TCGA-25-2396 
       18.05        85.05        13.02        49.05        38.04         3.02 
TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 
       12.00        45.01        19.99        42.02         2.96        29.00 
TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 TCGA-29-1693 
       30.97        26.96        78.87        44.71        47.18       101.75 
TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1699 
       38.53         0.79        33.70        31.17        68.28         0.53 
TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1710 
       16.90        18.64        59.67        18.25        41.95        29.23 
TCGA-29-1761 TCGA-29-1762 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 
       17.00        85.68        66.77        62.93        39.09        31.23 
TCGA-29-1769 TCGA-29-1770 TCGA-29-1771 TCGA-29-1774 TCGA-29-1775 TCGA-29-1776 
       22.98        24.36        22.52        17.29        12.36        11.84 
TCGA-29-1777 TCGA-29-1778 TCGA-29-1783 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 
       12.30        14.93         7.20         5.36        34.62        86.17 
TCGA-29-2425 TCGA-29-2427 TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 
       65.00        62.47        45.11         4.87        42.25        11.84 
TCGA-29-2434 TCGA-29-2436 TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 TCGA-30-1855 
       11.47         9.76        38.07        51.91        36.26         2.47 
TCGA-30-1856 TCGA-30-1857 TCGA-30-1859 TCGA-30-1860 TCGA-30-1861 TCGA-30-1862 
       15.68         0.26        48.07        44.91        34.78         6.08 
TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 TCGA-30-1891 TCGA-30-1892 
       36.62         1.18        57.57        24.26        30.05        48.79 
TCGA-31-1944 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 
       45.57        30.18        18.77        22.45         6.71        42.51 
TCGA-31-1956 TCGA-31-1959 TCGA-36-1568 TCGA-36-1569 TCGA-36-1570 TCGA-36-1571 
       44.09         2.17        28.73        29.06        21.53        22.85 
TCGA-36-1574 TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 TCGA-36-1580 TCGA-36-1581 
       22.55         8.55        30.05        25.74        24.23        24.69 
TCGA-36-2529 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 
       35.05        33.01        29.49        29.79        25.91        25.08 
TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2545 TCGA-36-2547 
       23.80        21.60         2.24        20.98        18.31        20.52 
TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 TCGA-36-2552 TCGA-42-2582 TCGA-42-2587 
       14.17         6.05        16.14        11.47        26.04        23.74 
TCGA-42-2588 TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 TCGA-42-2593 TCGA-57-1582 
        9.44         7.56         7.46        22.39         1.48        24.03 
TCGA-57-1583 TCGA-57-1584 TCGA-57-1585 TCGA-57-1586 TCGA-57-1992 TCGA-57-1993 
       11.38        21.14         1.74        22.32        28.96        25.05 
TCGA-57-1994 TCGA-59-2348 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 
       25.02       180.16        80.12        22.32       116.12         9.40 
TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 
       34.39         2.14         5.39        44.78        11.11         8.05 
TCGA-61-1724 TCGA-61-1725 TCGA-61-1727 TCGA-61-1728 TCGA-61-1730 TCGA-61-1733 
       20.94        31.40        18.54        27.88         4.34        31.76 
TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 TCGA-61-1743 
       48.79        44.84        35.80         2.43        33.67        43.69 
TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 
        1.41         8.42         5.79        11.41        13.02         9.07 
TCGA-61-1906 TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1913 TCGA-61-1914 
       34.13        31.30        37.02        42.48        48.92        56.58 
TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 TCGA-61-1995 TCGA-61-1998 
       67.73        43.43        15.75        38.17         1.97         5.52 
TCGA-61-2000 TCGA-61-2003 TCGA-61-2008 TCGA-61-2009 TCGA-61-2012 TCGA-61-2016 
       14.50         3.98        30.61        39.85        30.64         1.18 
TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 
       45.96        45.40         4.80        51.72        71.74        61.64 
TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 TCGA-61-2104 
       58.39        60.62        65.49        55.50         6.48        76.83 
TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 TCGA-61-2113 TCGA-61-2612 TCGA-61-2613 
       20.68        44.52       125.72        22.22         6.35        31.07 
TCGA-61-2614 
        8.58 

  20Q LOSS MUTATED 20Q LOSS WILD-TYPE 
              1.02               0.26 
  20Q LOSS MUTATED 20Q LOSS WILD-TYPE 
            129.96             180.16 
  20Q LOSS MUTATED 20Q LOSS WILD-TYPE 
            36.725             27.480 
[1] "1.0 - 130.0 (36.7)" "0.3 - 180.2 (27.5)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED"   "20Q LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-2614 
"20Q LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED"   "20Q LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-2614 
"20Q LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
"20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED"   "20Q LOSS MUTATED" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
"20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "20Q LOSS MUTATED" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE"   "20Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
"20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" "20Q LOSS WILD-TYPE" 
        TCGA-61-2614 
"20Q LOSS WILD-TYPE" 
[1] "hr=" "1.6"
D77V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  20Q LOSS MUTATED         0    30                0
  20Q LOSS WILD-TYPE       2   518                2
D77V3, multiclass
                  clus
vv                 20Q LOSS MUTATED 20Q LOSS WILD-TYPE
  OMENTUM                         0                  2
  OVARY                          30                518
  PERITONEUM OVARY                0                  2
D77V4, continuous
D77V5, binary
                    cls
clus                   0   1
  20Q LOSS MUTATED     0  31
  20Q LOSS WILD-TYPE   3 528
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  20Q LOSS MUTATED      0   31
  20Q LOSS WILD-TYPE    3  528
     clus
vv    20Q LOSS MUTATED 20Q LOSS WILD-TYPE
  NO                 0                  3
  YES               31                528
                    vv
clus                 R0 R1 R2
  20Q LOSS MUTATED    0  0  0
  20Q LOSS WILD-TYPE 14 26  2
D77V6, multiclass

Clustering(78) Variable = 21Q LOSS MUTATION ANALYSIS
D78V1, survival
                    sevent
clus2                  0   1
  21Q LOSS MUTATED    87  99
  21Q LOSS WILD-TYPE 174 187
  21Q LOSS MUTATED 21Q LOSS WILD-TYPE 
               186                361 
  21Q LOSS MUTATED 21Q LOSS WILD-TYPE 
                99                187 
$`21Q LOSS MUTATED`
TCGA-04-1335 TCGA-04-1347 TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1362 
        1.81        63.06        63.98        65.46        49.28        44.32 
TCGA-04-1365 TCGA-04-1638 TCGA-04-1648 TCGA-04-1651 TCGA-04-1652 TCGA-04-1654 
       76.54        55.40        28.64        36.23        31.86        47.70 
TCGA-04-1655 TCGA-09-0367 TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 
       45.34        17.95        35.54         9.96        38.43        89.33 
TCGA-09-1667 TCGA-09-1669 TCGA-09-1675 TCGA-09-2049 TCGA-09-2051 TCGA-09-2053 
       61.87        30.48        97.55       112.37        63.09        39.75 
TCGA-09-2056 TCGA-10-0926 TCGA-10-0927 TCGA-10-0930 TCGA-10-0937 TCGA-13-0723 
       12.46        25.91        81.47        33.24        15.12        39.58 
TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0758 TCGA-13-0760 TCGA-13-0761 
       15.19        17.79        55.17        11.38        11.54        34.06 
TCGA-13-0791 TCGA-13-0792 TCGA-13-0794 TCGA-13-0803 TCGA-13-0883 TCGA-13-0886 
       38.93        36.72        30.35        43.82        68.91        74.27 
TCGA-13-0887 TCGA-13-0891 TCGA-13-0899 TCGA-13-0900 TCGA-13-0905 TCGA-13-0906 
       66.64        69.01        56.15        57.07        47.84        44.94 
TCGA-13-0908 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 TCGA-13-0919 TCGA-13-0920 
       44.84        34.06        29.98        21.14        14.89        13.81 
TCGA-13-0921 TCGA-13-1404 TCGA-13-1407 TCGA-13-1409 TCGA-13-1411 TCGA-13-1483 
        4.64         6.61         6.05         6.84         4.21        29.39 
TCGA-13-1484 TCGA-13-1487 TCGA-13-1488 TCGA-13-1494 TCGA-13-1495 TCGA-13-1497 
       98.04        22.39        70.82        38.17        49.22        54.31 
TCGA-13-1501 TCGA-13-1507 TCGA-13-2061 TCGA-13-2065 TCGA-20-1682 TCGA-20-1684 
       32.84         4.77        10.78         8.75        27.48        19.07 
TCGA-20-1686 TCGA-20-1687 TCGA-23-1022 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 
        2.93         2.66        42.51        29.10        18.87         2.24 
TCGA-23-1113 TCGA-23-1114 TCGA-23-1124 TCGA-23-2072 TCGA-23-2077 TCGA-23-2641 
       31.20        68.68        58.13        24.95       115.89         2.76 
TCGA-24-0968 TCGA-24-0975 TCGA-24-1103 TCGA-24-1105 TCGA-24-1413 TCGA-24-1418 
       19.63        21.80        54.08        47.41         6.31         7.99 
TCGA-24-1422 TCGA-24-1425 TCGA-24-1431 TCGA-24-1434 TCGA-24-1471 TCGA-24-1548 
        0.76         5.95        19.17        18.67         1.18        16.21 
TCGA-24-1549 TCGA-24-1557 TCGA-24-1567 TCGA-24-1604 TCGA-24-1614 TCGA-24-1846 
       56.58        39.88        17.23        88.34        48.33         4.37 
TCGA-24-1849 TCGA-24-1850 TCGA-24-1920 TCGA-24-1924 TCGA-24-1930 TCGA-24-2023 
        5.75         5.49         9.80        30.21        81.11        44.84 
TCGA-24-2026 TCGA-24-2029 TCGA-24-2267 TCGA-24-2281 TCGA-24-2288 TCGA-24-2290 
       34.82        14.43        47.54        44.58         0.82        36.23 
TCGA-24-2298 TCGA-25-1316 TCGA-25-1318 TCGA-25-1320 TCGA-25-1321 TCGA-25-1625 
       53.26        37.02        34.98        36.95        33.96        18.02 
TCGA-25-1627 TCGA-25-1630 TCGA-25-1631 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 
        0.36         7.86         0.30        56.94        60.59        35.54 
TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 TCGA-25-2396 TCGA-29-1691 TCGA-29-1695 
       51.22        14.93        24.99         3.02        47.18         0.79 
TCGA-29-1699 TCGA-29-1705 TCGA-29-1711 TCGA-29-1761 TCGA-29-1763 TCGA-29-1769 
        0.53        18.25        34.62        17.00        66.77        22.98 
TCGA-29-1770 TCGA-29-1774 TCGA-29-1775 TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 
       24.36        17.29        12.36         5.36        34.62        86.17 
TCGA-29-2425 TCGA-29-2427 TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 TCGA-30-1855 
       65.00        62.47        38.07        51.91        36.26         2.47 
TCGA-30-1856 TCGA-30-1859 TCGA-30-1866 TCGA-30-1891 TCGA-30-1892 TCGA-31-1950 
       15.68        48.07        36.62        30.05        48.79        18.77 
TCGA-31-1956 TCGA-36-1569 TCGA-36-1575 TCGA-36-1581 TCGA-36-2530 TCGA-36-2538 
       44.09        29.06         8.55        24.69        33.01        25.08 
TCGA-36-2545 TCGA-36-2548 TCGA-36-2551 TCGA-36-2552 TCGA-42-2587 TCGA-42-2593 
       18.31        14.17        16.14        11.47        23.74         1.48 
TCGA-57-1993 TCGA-57-1994 TCGA-59-2348 TCGA-59-2372 TCGA-61-1727 TCGA-61-1728 
       25.05        25.02       180.16        44.78        18.54        27.88 
TCGA-61-1730 TCGA-61-1733 TCGA-61-1734 TCGA-61-1741 TCGA-61-1899 TCGA-61-1913 
        4.34        31.76        28.47        33.67         8.42        48.92 
TCGA-61-1918 TCGA-61-1919 TCGA-61-2008 TCGA-61-2016 TCGA-61-2094 TCGA-61-2113 
       15.75        38.17        30.61         1.18        71.74        22.22 

$`21Q LOSS WILD-TYPE`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 TCGA-04-1342 
       40.24        41.00        49.15         2.01        46.62        18.51 
TCGA-04-1343 TCGA-04-1346 TCGA-04-1348 TCGA-04-1349 TCGA-04-1361 TCGA-04-1364 
       11.87        65.49        48.76        21.57        32.52        33.67 
TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 TCGA-04-1516 TCGA-04-1517 TCGA-04-1525 
       71.47        82.36        56.55        41.59        19.99        38.37 
TCGA-04-1530 TCGA-04-1536 TCGA-04-1542 TCGA-04-1644 TCGA-04-1646 TCGA-04-1649 
      119.08        29.06        84.20        48.89        27.88        64.64 
TCGA-09-0364 TCGA-09-0365 TCGA-09-0366 TCGA-09-1664 TCGA-09-1665 TCGA-09-1666 
       29.16         9.47        57.73        74.89        41.59        57.57 
TCGA-09-1668 TCGA-09-1670 TCGA-09-1672 TCGA-09-1673 TCGA-09-1674 TCGA-09-2043 
       55.36        17.98         5.85         3.02         8.55         6.15 
TCGA-09-2044 TCGA-09-2045 TCGA-09-2048 TCGA-09-2050 TCGA-09-2054 TCGA-09-2055 
        6.12        35.15         4.50        71.11        20.91        26.93 
TCGA-10-0925 TCGA-10-0928 TCGA-10-0931 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 
       54.31        18.48        32.28        11.70         3.88        35.41 
TCGA-10-0936 TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 TCGA-13-0724 
       35.80        19.86         6.21        24.59        44.55         2.73 
TCGA-13-0725 TCGA-13-0726 TCGA-13-0755 TCGA-13-0757 TCGA-13-0762 TCGA-13-0764 
       12.39        31.07         2.47        11.18        32.25        31.04 
TCGA-13-0766 TCGA-13-0768 TCGA-13-0793 TCGA-13-0795 TCGA-13-0797 TCGA-13-0799 
       21.40         8.42        28.70        19.56         8.71         7.79 
TCGA-13-0800 TCGA-13-0801 TCGA-13-0802 TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 
        8.12         8.28         8.19        35.28        35.28        13.61 
TCGA-13-0884 TCGA-13-0885 TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 TCGA-13-0893 
      107.18        91.40        70.39        61.81        67.99        43.36 
TCGA-13-0897 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0910 TCGA-13-0911 
       57.47        19.36        47.38        48.33        37.08        27.68 
TCGA-13-0923 TCGA-13-0924 TCGA-13-1403 TCGA-13-1405 TCGA-13-1408 TCGA-13-1410 
        6.41         6.08        10.88         7.36         5.92         4.70 
TCGA-13-1412 TCGA-13-1477 TCGA-13-1481 TCGA-13-1482 TCGA-13-1485 TCGA-13-1489 
        5.33        54.61        87.06        61.71        20.68        82.88 
TCGA-13-1491 TCGA-13-1492 TCGA-13-1496 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 
       52.44        73.55         4.24        37.61        38.37        13.97 
TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1509 TCGA-13-1510 TCGA-13-1511 
       16.57         4.21         4.41         4.14         2.56         3.88 
TCGA-13-1512 TCGA-13-2057 TCGA-13-2059 TCGA-13-2060 TCGA-13-2071 TCGA-20-0987 
        3.09        14.24        12.23         8.58         6.28        23.05 
TCGA-20-0990 TCGA-20-0991 TCGA-20-0996 TCGA-20-1683 TCGA-20-1685 TCGA-23-1021 
       25.94        26.20        72.20        25.38        16.67        47.54 
TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 
       40.54        15.39        26.83        31.73        49.41         8.81 
TCGA-23-1109 TCGA-23-1110 TCGA-23-1111 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 
       51.35        54.51         3.22         4.57        33.30        86.01 
TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 TCGA-23-1122 TCGA-23-1123 TCGA-23-1809 
      129.96         4.27         6.38        39.09        33.47         0.53 
TCGA-23-2078 TCGA-23-2079 TCGA-23-2081 TCGA-23-2084 TCGA-23-2643 TCGA-23-2645 
       87.48        91.66        77.00        49.84         4.70         4.50 
TCGA-24-0966 TCGA-24-0970 TCGA-24-0979 TCGA-24-0980 TCGA-24-0982 TCGA-24-1104 
        7.63        11.64        41.56         7.66        22.32        63.55 
TCGA-24-1416 TCGA-24-1417 TCGA-24-1419 TCGA-24-1423 TCGA-24-1424 TCGA-24-1426 
        6.38         7.82         7.86         6.25         6.02         5.36 
TCGA-24-1427 TCGA-24-1428 TCGA-24-1430 TCGA-24-1435 TCGA-24-1436 TCGA-24-1463 
        4.80        17.36        28.34        43.53         8.55        72.92 
TCGA-24-1464 TCGA-24-1466 TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 TCGA-24-1474 
       12.46        45.14       105.99         9.11         3.42        22.19 
TCGA-24-1544 TCGA-24-1545 TCGA-24-1546 TCGA-24-1550 TCGA-24-1551 TCGA-24-1552 
       26.96        57.37        64.27        41.06        51.91        41.39 
TCGA-24-1553 TCGA-24-1555 TCGA-24-1556 TCGA-24-1558 TCGA-24-1560 TCGA-24-1562 
       58.09        88.50        70.62        19.53        44.09        45.50 
TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1603 TCGA-24-1616 TCGA-24-1842 
       47.70        25.87        10.26        90.15        38.24         8.32 
TCGA-24-1843 TCGA-24-1844 TCGA-24-1845 TCGA-24-1847 TCGA-24-1923 TCGA-24-1927 
        3.48         3.72         3.81        11.28        22.65        16.41 
TCGA-24-1928 TCGA-24-2019 TCGA-24-2020 TCGA-24-2024 TCGA-24-2027 TCGA-24-2030 
       11.05         4.87       151.99        58.16       109.68        53.95 
TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2038 TCGA-24-2254 TCGA-24-2260 
       18.48        28.18        64.01        44.48        57.07        36.16 
TCGA-24-2261 TCGA-24-2262 TCGA-24-2271 TCGA-24-2280 TCGA-24-2289 TCGA-24-2293 
        0.79         0.36        31.63        70.45        67.36        16.64 
TCGA-24-2295 TCGA-24-2297 TCGA-25-1312 TCGA-25-1313 TCGA-25-1314 TCGA-25-1315 
       33.11        55.86         1.02        26.93        31.99        51.06 
TCGA-25-1317 TCGA-25-1319 TCGA-25-1322 TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 
        1.02        65.00         2.99        12.00         2.96        18.58 
TCGA-25-1626 TCGA-25-1628 TCGA-25-1877 TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 
       15.78        20.58        18.05        85.05        13.02        49.05 
TCGA-25-2392 TCGA-25-2393 TCGA-25-2397 TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 
        1.02        38.04        12.00        45.01        19.99        42.02 
TCGA-25-2401 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 TCGA-29-1688 TCGA-29-1690 
        2.96        29.00        30.97        26.96        78.87        44.71 
TCGA-29-1693 TCGA-29-1694 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 TCGA-29-1701 
      101.75        38.53        33.70        31.17        68.28        16.90 
TCGA-29-1702 TCGA-29-1703 TCGA-29-1707 TCGA-29-1710 TCGA-29-1762 TCGA-29-1764 
       18.64        59.67        41.95        29.23        85.68        62.93 
TCGA-29-1766 TCGA-29-1768 TCGA-29-1771 TCGA-29-1776 TCGA-29-1777 TCGA-29-1778 
       39.09        31.23        22.52        11.84        12.30        14.93 
TCGA-29-1781 TCGA-29-1783 TCGA-29-2428 TCGA-29-2429 TCGA-29-2431 TCGA-29-2432 
        8.35         7.20        45.11         4.87        42.25        11.84 
TCGA-29-2434 TCGA-29-2436 TCGA-30-1857 TCGA-30-1860 TCGA-30-1861 TCGA-30-1862 
       11.47         9.76         0.26        44.91        34.78         6.08 
TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 TCGA-31-1944 TCGA-31-1946 TCGA-31-1951 
        1.18        57.57        24.26        45.57        30.18        22.45 
TCGA-31-1953 TCGA-31-1955 TCGA-31-1959 TCGA-36-1568 TCGA-36-1570 TCGA-36-1571 
        6.71        42.51         2.17        28.73        21.53        22.85 
TCGA-36-1574 TCGA-36-1576 TCGA-36-1577 TCGA-36-1578 TCGA-36-1580 TCGA-36-2529 
       22.55        30.05        25.74        27.85        24.23        35.05 
TCGA-36-2532 TCGA-36-2534 TCGA-36-2537 TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 
       29.49        29.79        25.91        23.80        21.60         2.24 
TCGA-36-2544 TCGA-36-2547 TCGA-36-2549 TCGA-42-2582 TCGA-42-2588 TCGA-42-2589 
       20.98        20.52         6.05        26.04         9.44         7.56 
TCGA-42-2590 TCGA-42-2591 TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 TCGA-57-1585 
        7.46        22.39        24.03        11.38        21.14         1.74 
TCGA-57-1586 TCGA-57-1992 TCGA-59-2349 TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 
       22.32        28.96        80.12        22.32       116.12         9.40 
TCGA-59-2354 TCGA-59-2355 TCGA-59-2363 TCGA-61-1721 TCGA-61-1722 TCGA-61-1724 
       34.39         2.14         5.39        11.11         8.05        20.94 
TCGA-61-1725 TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 TCGA-61-1740 TCGA-61-1743 
       31.40        48.79        44.84        35.80         2.43        43.69 
TCGA-61-1895 TCGA-61-1900 TCGA-61-1901 TCGA-61-1903 TCGA-61-1904 TCGA-61-1906 
        1.41         5.79        11.41        13.02         9.07        34.13 
TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1914 TCGA-61-1915 TCGA-61-1917 
       31.30        37.02        42.48        56.58        67.73        43.43 
TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2002 TCGA-61-2003 TCGA-61-2009 
        1.97         5.52        14.50        17.98         3.98        39.85 
TCGA-61-2012 TCGA-61-2017 TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2092 
       30.64        45.96        45.40         4.80         4.77        51.72 
TCGA-61-2095 TCGA-61-2096 TCGA-61-2097 TCGA-61-2098 TCGA-61-2101 TCGA-61-2102 
       61.64        58.39        60.62        65.49        55.50         6.48 
TCGA-61-2104 TCGA-61-2109 TCGA-61-2110 TCGA-61-2111 TCGA-61-2612 TCGA-61-2613 
       76.83        20.68        44.52       125.72         6.35        31.07 
TCGA-61-2614 
        8.58 

  21Q LOSS MUTATED 21Q LOSS WILD-TYPE 
              0.30               0.26 
  21Q LOSS MUTATED 21Q LOSS WILD-TYPE 
            180.16             151.99 
  21Q LOSS MUTATED 21Q LOSS WILD-TYPE 
            30.415             26.200 
[1] "0.3 - 180.2 (30.4)" "0.3 - 152.0 (26.2)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-2614 
"21Q LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-2614 
"21Q LOSS WILD-TYPE" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED"   "21Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "21Q LOSS MUTATED"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"21Q LOSS WILD-TYPE"   "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
"21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "21Q LOSS MUTATED" "21Q LOSS WILD-TYPE" "21Q LOSS WILD-TYPE" 
        TCGA-61-2614 
"21Q LOSS WILD-TYPE" 
[1] "hr=" "1"  
D78V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  21Q LOSS MUTATED         1   185                0
  21Q LOSS WILD-TYPE       1   363                2
D78V3, multiclass
                  clus
vv                 21Q LOSS MUTATED 21Q LOSS WILD-TYPE
  OMENTUM                         1                  1
  OVARY                         185                363
  PERITONEUM OVARY                0                  2
D78V4, continuous
D78V5, binary
                    cls
clus                   0   1
  21Q LOSS MUTATED     1 188
  21Q LOSS WILD-TYPE   2 371
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  21Q LOSS MUTATED      1  188
  21Q LOSS WILD-TYPE    2  371
     clus
vv    21Q LOSS MUTATED 21Q LOSS WILD-TYPE
  NO                 1                  2
  YES              188                371
                    vv
clus                 R0 R1 R2
  21Q LOSS MUTATED    4  8  1
  21Q LOSS WILD-TYPE 10 18  1
D78V6, multiclass
    clus
vv   21Q LOSS MUTATED 21Q LOSS WILD-TYPE
  R0                4                 10
  R1                8                 18
  R2                1                  1

Clustering(79) Variable = 22Q LOSS MUTATION ANALYSIS
D79V1, survival
                    sevent
clus2                  0   1
  22Q LOSS MUTATED   184 220
  22Q LOSS WILD-TYPE  77  66
  22Q LOSS MUTATED 22Q LOSS WILD-TYPE 
               404                143 
  22Q LOSS MUTATED 22Q LOSS WILD-TYPE 
               220                 66 
$`22Q LOSS MUTATED`
TCGA-04-1331 TCGA-04-1336 TCGA-04-1337 TCGA-04-1338 TCGA-04-1342 TCGA-04-1346 
       40.24        49.15         2.01        46.62        18.51        65.49 
TCGA-04-1347 TCGA-04-1349 TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1361 
       63.06        21.57        63.98        65.46        49.28        32.52 
TCGA-04-1362 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 TCGA-04-1514 TCGA-04-1517 
       44.32        76.54        71.47        82.36        56.55        19.99 
TCGA-04-1525 TCGA-04-1530 TCGA-04-1542 TCGA-04-1638 TCGA-04-1644 TCGA-04-1646 
       38.37       119.08        84.20        55.40        48.89        27.88 
TCGA-04-1648 TCGA-04-1649 TCGA-04-1651 TCGA-04-1652 TCGA-04-1655 TCGA-09-0364 
       28.64        64.64        36.23        31.86        45.34        29.16 
TCGA-09-0365 TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 TCGA-09-1659 TCGA-09-1661 
        9.47        57.73        17.95        35.54         9.96        38.43 
TCGA-09-1662 TCGA-09-1664 TCGA-09-1666 TCGA-09-1667 TCGA-09-1668 TCGA-09-1669 
       89.33        74.89        57.57        61.87        55.36        30.48 
TCGA-09-1670 TCGA-09-1673 TCGA-09-1674 TCGA-09-1675 TCGA-09-2044 TCGA-09-2048 
       17.98         3.02         8.55        97.55         6.12         4.50 
TCGA-09-2049 TCGA-09-2050 TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 TCGA-09-2056 
      112.37        71.11        63.09        39.75        20.91        12.46 
TCGA-10-0925 TCGA-10-0926 TCGA-10-0927 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 
       54.31        25.91        81.47        18.48        33.24        32.28 
TCGA-10-0933 TCGA-10-0937 TCGA-10-0938 TCGA-13-0714 TCGA-13-0717 TCGA-13-0720 
       11.70        15.12        19.86         6.21        24.59        44.55 
TCGA-13-0723 TCGA-13-0724 TCGA-13-0725 TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 
       39.58         2.73        12.39        15.19        17.79        55.17 
TCGA-13-0757 TCGA-13-0758 TCGA-13-0761 TCGA-13-0766 TCGA-13-0791 TCGA-13-0794 
       11.18        11.38        34.06        21.40        38.93        30.35 
TCGA-13-0795 TCGA-13-0799 TCGA-13-0800 TCGA-13-0801 TCGA-13-0802 TCGA-13-0803 
       19.56         7.79         8.12         8.28         8.19        43.82 
TCGA-13-0804 TCGA-13-0805 TCGA-13-0807 TCGA-13-0883 TCGA-13-0884 TCGA-13-0885 
       35.28        35.28        13.61        68.91       107.18        91.40 
TCGA-13-0886 TCGA-13-0887 TCGA-13-0888 TCGA-13-0889 TCGA-13-0890 TCGA-13-0891 
       74.27        66.64        70.39        61.81        67.99        69.01 
TCGA-13-0897 TCGA-13-0900 TCGA-13-0901 TCGA-13-0903 TCGA-13-0904 TCGA-13-0906 
       57.47        57.07        19.36        47.38        48.33        44.94 
TCGA-13-0908 TCGA-13-0910 TCGA-13-0911 TCGA-13-0912 TCGA-13-0913 TCGA-13-0916 
       44.84        37.08        27.68        34.06        29.98        21.14 
TCGA-13-0919 TCGA-13-0921 TCGA-13-0923 TCGA-13-0924 TCGA-13-1404 TCGA-13-1407 
       14.89         4.64         6.41         6.08         6.61         6.05 
TCGA-13-1408 TCGA-13-1409 TCGA-13-1411 TCGA-13-1412 TCGA-13-1481 TCGA-13-1482 
        5.92         6.84         4.21         5.33        87.06        61.71 
TCGA-13-1483 TCGA-13-1484 TCGA-13-1487 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 
       29.39        98.04        22.39        82.88        52.44        73.55 
TCGA-13-1494 TCGA-13-1495 TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 
       38.17        49.22         4.24        54.31        37.61        38.37 
TCGA-13-1500 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1507 TCGA-13-1509 
       13.97        16.57         4.21         4.41         4.77         4.14 
TCGA-13-1512 TCGA-13-2057 TCGA-13-2059 TCGA-13-2060 TCGA-13-2061 TCGA-13-2065 
        3.09        14.24        12.23         8.58        10.78         8.75 
TCGA-13-2071 TCGA-20-0990 TCGA-20-0991 TCGA-20-1682 TCGA-20-1683 TCGA-20-1684 
        6.28        25.94        26.20        27.48        25.38        19.07 
TCGA-20-1685 TCGA-20-1687 TCGA-23-1021 TCGA-23-1022 TCGA-23-1024 TCGA-23-1027 
       16.67         2.66        47.54        42.51        15.39        31.73 
TCGA-23-1028 TCGA-23-1029 TCGA-23-1030 TCGA-23-1031 TCGA-23-1032 TCGA-23-1109 
       49.41         8.81        29.10        18.87         2.24        51.35 
TCGA-23-1110 TCGA-23-1113 TCGA-23-1114 TCGA-23-1116 TCGA-23-1117 TCGA-23-1122 
       54.51        31.20        68.68         4.57        33.30        39.09 
TCGA-23-1123 TCGA-23-2072 TCGA-23-2078 TCGA-23-2081 TCGA-23-2084 TCGA-23-2641 
       33.47        24.95        87.48        77.00        49.84         2.76 
TCGA-23-2643 TCGA-23-2645 TCGA-24-0966 TCGA-24-0968 TCGA-24-0970 TCGA-24-0975 
        4.70         4.50         7.63        19.63        11.64        21.80 
TCGA-24-0979 TCGA-24-0982 TCGA-24-1104 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 
       41.56        22.32        63.55        47.41         6.31         6.38 
TCGA-24-1417 TCGA-24-1418 TCGA-24-1419 TCGA-24-1422 TCGA-24-1423 TCGA-24-1424 
        7.82         7.99         7.86         0.76         6.25         6.02 
TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 TCGA-24-1428 TCGA-24-1431 TCGA-24-1434 
        5.95         5.36         4.80        17.36        19.17        18.67 
TCGA-24-1435 TCGA-24-1464 TCGA-24-1466 TCGA-24-1471 TCGA-24-1474 TCGA-24-1544 
       43.53        12.46        45.14         1.18        22.19        26.96 
TCGA-24-1545 TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1552 TCGA-24-1555 
       57.37        16.21        56.58        41.06        41.39        88.50 
TCGA-24-1557 TCGA-24-1560 TCGA-24-1562 TCGA-24-1564 TCGA-24-1565 TCGA-24-1567 
       39.88        44.09        45.50        25.87        10.26        17.23 
TCGA-24-1603 TCGA-24-1604 TCGA-24-1614 TCGA-24-1616 TCGA-24-1842 TCGA-24-1843 
       90.15        88.34        48.33        38.24         8.32         3.48 
TCGA-24-1844 TCGA-24-1846 TCGA-24-1850 TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 
        3.72         4.37         5.49         9.80        22.65        30.21 
TCGA-24-1930 TCGA-24-2019 TCGA-24-2020 TCGA-24-2023 TCGA-24-2026 TCGA-24-2027 
       81.11         4.87       151.99        44.84        34.82       109.68 
TCGA-24-2029 TCGA-24-2030 TCGA-24-2033 TCGA-24-2036 TCGA-24-2254 TCGA-24-2260 
       14.43        53.95        18.48        64.01        57.07        36.16 
TCGA-24-2261 TCGA-24-2262 TCGA-24-2267 TCGA-24-2271 TCGA-24-2280 TCGA-24-2288 
        0.79         0.36        47.54        31.63        70.45         0.82 
TCGA-24-2293 TCGA-24-2295 TCGA-24-2298 TCGA-25-1312 TCGA-25-1314 TCGA-25-1315 
       16.64        33.11        53.26         1.02        31.99        51.06 
TCGA-25-1316 TCGA-25-1317 TCGA-25-1318 TCGA-25-1319 TCGA-25-1320 TCGA-25-1321 
       37.02         1.02        34.98        65.00        36.95        33.96 
TCGA-25-1322 TCGA-25-1329 TCGA-25-1623 TCGA-25-1628 TCGA-25-1631 TCGA-25-1632 
        2.99         2.96        18.58        20.58         0.30        56.94 
TCGA-25-1633 TCGA-25-1634 TCGA-25-1635 TCGA-25-1870 TCGA-25-1871 TCGA-25-1877 
       60.59        35.54        51.22        14.93        24.99        18.05 
TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 TCGA-25-2393 TCGA-25-2397 
       85.05        13.02        49.05         1.02        38.04        12.00 
TCGA-25-2398 TCGA-25-2399 TCGA-25-2400 TCGA-25-2404 TCGA-25-2408 TCGA-25-2409 
       45.01        19.99        42.02        29.00        30.97        26.96 
TCGA-29-1693 TCGA-29-1694 TCGA-29-1695 TCGA-29-1696 TCGA-29-1697 TCGA-29-1698 
      101.75        38.53         0.79        33.70        31.17        68.28 
TCGA-29-1701 TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1711 
       16.90        18.64        59.67        18.25        41.95        34.62 
TCGA-29-1761 TCGA-29-1763 TCGA-29-1766 TCGA-29-1769 TCGA-29-1774 TCGA-29-1775 
       17.00        66.77        39.09        22.98        17.29        12.36 
TCGA-29-1776 TCGA-29-1778 TCGA-29-1783 TCGA-29-1785 TCGA-29-2428 TCGA-29-2432 
       11.84        14.93         7.20        34.62        45.11        11.84 
TCGA-30-1714 TCGA-30-1718 TCGA-30-1853 TCGA-30-1855 TCGA-30-1856 TCGA-30-1859 
       38.07        51.91        36.26         2.47        15.68        48.07 
TCGA-30-1860 TCGA-30-1862 TCGA-30-1866 TCGA-30-1867 TCGA-30-1880 TCGA-30-1887 
       44.91         6.08        36.62         1.18        57.57        24.26 
TCGA-30-1892 TCGA-31-1944 TCGA-31-1951 TCGA-31-1953 TCGA-31-1955 TCGA-31-1959 
       48.79        45.57        22.45         6.71        42.51         2.17 
TCGA-36-1568 TCGA-36-1569 TCGA-36-1571 TCGA-36-1575 TCGA-36-1576 TCGA-36-1577 
       28.73        29.06        22.85         8.55        30.05        25.74 
TCGA-36-1578 TCGA-36-1580 TCGA-36-1581 TCGA-36-2530 TCGA-36-2532 TCGA-36-2534 
       27.85        24.23        24.69        33.01        29.49        29.79 
TCGA-36-2538 TCGA-36-2540 TCGA-36-2542 TCGA-36-2543 TCGA-36-2544 TCGA-36-2548 
       25.08        23.80        21.60         2.24        20.98        14.17 
TCGA-36-2551 TCGA-36-2552 TCGA-42-2588 TCGA-42-2589 TCGA-42-2590 TCGA-42-2591 
       16.14        11.47         9.44         7.56         7.46        22.39 
TCGA-42-2593 TCGA-57-1582 TCGA-57-1583 TCGA-57-1584 TCGA-57-1992 TCGA-57-1993 
        1.48        24.03        11.38        21.14        28.96        25.05 
TCGA-57-1994 TCGA-59-2348 TCGA-59-2350 TCGA-59-2351 TCGA-59-2352 TCGA-59-2354 
       25.02       180.16        22.32       116.12         9.40        34.39 
TCGA-59-2355 TCGA-59-2363 TCGA-59-2372 TCGA-61-1722 TCGA-61-1725 TCGA-61-1728 
        2.14         5.39        44.78         8.05        31.40        27.88 
TCGA-61-1730 TCGA-61-1733 TCGA-61-1736 TCGA-61-1738 TCGA-61-1740 TCGA-61-1741 
        4.34        31.76        48.79        35.80         2.43        33.67 
TCGA-61-1743 TCGA-61-1899 TCGA-61-1900 TCGA-61-1901 TCGA-61-1906 TCGA-61-1907 
       43.69         8.42         5.79        11.41        34.13        31.30 
TCGA-61-1910 TCGA-61-1913 TCGA-61-1915 TCGA-61-1917 TCGA-61-1918 TCGA-61-1919 
       37.02        48.92        67.73        43.43        15.75        38.17 
TCGA-61-1995 TCGA-61-1998 TCGA-61-2000 TCGA-61-2003 TCGA-61-2009 TCGA-61-2012 
        1.97         5.52        14.50         3.98        39.85        30.64 
TCGA-61-2016 TCGA-61-2018 TCGA-61-2087 TCGA-61-2088 TCGA-61-2096 TCGA-61-2097 
        1.18        45.40         4.80         4.77        58.39        60.62 
TCGA-61-2098 TCGA-61-2102 TCGA-61-2109 TCGA-61-2110 TCGA-61-2113 TCGA-61-2612 
       65.49         6.48        20.68        44.52        22.22         6.35 
TCGA-61-2613 TCGA-61-2614 
       31.07         8.58 

$`22Q LOSS WILD-TYPE`
TCGA-04-1332 TCGA-04-1335 TCGA-04-1343 TCGA-04-1348 TCGA-04-1364 TCGA-04-1516 
       41.00         1.81        11.87        48.76        33.67        41.59 
TCGA-04-1536 TCGA-04-1654 TCGA-09-1665 TCGA-09-1672 TCGA-09-2043 TCGA-09-2045 
       29.06        47.70        41.59         5.85         6.15        35.15 
TCGA-09-2055 TCGA-10-0934 TCGA-10-0935 TCGA-10-0936 TCGA-13-0726 TCGA-13-0755 
       26.93         3.88        35.41        35.80        31.07         2.47 
TCGA-13-0760 TCGA-13-0762 TCGA-13-0764 TCGA-13-0768 TCGA-13-0792 TCGA-13-0793 
       11.54        32.25        31.04         8.42        36.72        28.70 
TCGA-13-0797 TCGA-13-0893 TCGA-13-0899 TCGA-13-0905 TCGA-13-0920 TCGA-13-1403 
        8.71        43.36        56.15        47.84        13.81        10.88 
TCGA-13-1405 TCGA-13-1410 TCGA-13-1477 TCGA-13-1485 TCGA-13-1488 TCGA-13-1501 
        7.36         4.70        54.61        20.68        70.82        32.84 
TCGA-13-1510 TCGA-13-1511 TCGA-20-0987 TCGA-20-0996 TCGA-20-1686 TCGA-23-1023 
        2.56         3.88        23.05        72.20         2.93        40.54 
TCGA-23-1026 TCGA-23-1111 TCGA-23-1118 TCGA-23-1119 TCGA-23-1120 TCGA-23-1121 
       26.83         3.22        86.01       129.96         4.27         6.38 
TCGA-23-1124 TCGA-23-1809 TCGA-23-2077 TCGA-23-2079 TCGA-24-0980 TCGA-24-1103 
       58.13         0.53       115.89        91.66         7.66        54.08 
TCGA-24-1430 TCGA-24-1436 TCGA-24-1463 TCGA-24-1467 TCGA-24-1469 TCGA-24-1470 
       28.34         8.55        72.92       105.99         9.11         3.42 
TCGA-24-1546 TCGA-24-1551 TCGA-24-1553 TCGA-24-1556 TCGA-24-1558 TCGA-24-1563 
       64.27        51.91        58.09        70.62        19.53        47.70 
TCGA-24-1845 TCGA-24-1847 TCGA-24-1849 TCGA-24-1927 TCGA-24-1928 TCGA-24-2024 
        3.81        11.28         5.75        16.41        11.05        58.16 
TCGA-24-2035 TCGA-24-2038 TCGA-24-2281 TCGA-24-2289 TCGA-24-2290 TCGA-24-2297 
       28.18        44.48        44.58        67.36        36.23        55.86 
TCGA-25-1313 TCGA-25-1323 TCGA-25-1625 TCGA-25-1626 TCGA-25-1627 TCGA-25-1630 
       26.93        12.00        18.02        15.78         0.36         7.86 
TCGA-25-2396 TCGA-25-2401 TCGA-29-1688 TCGA-29-1690 TCGA-29-1691 TCGA-29-1699 
        3.02         2.96        78.87        44.71        47.18         0.53 
TCGA-29-1710 TCGA-29-1762 TCGA-29-1764 TCGA-29-1768 TCGA-29-1770 TCGA-29-1771 
       29.23        85.68        62.93        31.23        24.36        22.52 
TCGA-29-1777 TCGA-29-1781 TCGA-29-1784 TCGA-29-2414 TCGA-29-2425 TCGA-29-2427 
       12.30         8.35         5.36        86.17        65.00        62.47 
TCGA-29-2429 TCGA-29-2431 TCGA-29-2434 TCGA-29-2436 TCGA-30-1857 TCGA-30-1861 
        4.87        42.25        11.47         9.76         0.26        34.78 
TCGA-30-1891 TCGA-31-1946 TCGA-31-1950 TCGA-31-1956 TCGA-36-1570 TCGA-36-1574 
       30.05        30.18        18.77        44.09        21.53        22.55 
TCGA-36-2529 TCGA-36-2537 TCGA-36-2545 TCGA-36-2547 TCGA-36-2549 TCGA-42-2582 
       35.05        25.91        18.31        20.52         6.05        26.04 
TCGA-42-2587 TCGA-57-1585 TCGA-57-1586 TCGA-59-2349 TCGA-61-1721 TCGA-61-1724 
       23.74         1.74        22.32        80.12        11.11        20.94 
TCGA-61-1727 TCGA-61-1734 TCGA-61-1737 TCGA-61-1895 TCGA-61-1903 TCGA-61-1904 
       18.54        28.47        44.84         1.41        13.02         9.07 
TCGA-61-1911 TCGA-61-1914 TCGA-61-2002 TCGA-61-2008 TCGA-61-2017 TCGA-61-2092 
       42.48        56.58        17.98        30.61        45.96        51.72 
TCGA-61-2094 TCGA-61-2095 TCGA-61-2101 TCGA-61-2104 TCGA-61-2111 
       71.74        61.64        55.50        76.83       125.72 

  22Q LOSS MUTATED 22Q LOSS WILD-TYPE 
              0.30               0.26 
  22Q LOSS MUTATED 22Q LOSS WILD-TYPE 
            180.16             129.96 
  22Q LOSS MUTATED 22Q LOSS WILD-TYPE 
             27.88              28.34 
[1] "0.3 - 180.2 (27.9)" "0.3 - 130.0 (28.3)"
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-2614 
  "22Q LOSS MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-2614 
  "22Q LOSS MUTATED" 
        TCGA-04-1331         TCGA-04-1332         TCGA-04-1335 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-04-1336         TCGA-04-1337         TCGA-04-1338 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-04-1342         TCGA-04-1343         TCGA-04-1346 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-04-1347         TCGA-04-1348         TCGA-04-1349 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-04-1350         TCGA-04-1351         TCGA-04-1356 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-04-1361         TCGA-04-1362         TCGA-04-1364 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-04-1365         TCGA-04-1367         TCGA-04-1371 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-04-1514         TCGA-04-1516         TCGA-04-1517 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-04-1525         TCGA-04-1530         TCGA-04-1536 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-04-1542         TCGA-04-1638         TCGA-04-1644 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-04-1646         TCGA-04-1648         TCGA-04-1649 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-04-1651         TCGA-04-1652         TCGA-04-1654 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-04-1655         TCGA-09-0364         TCGA-09-0365 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-09-0366         TCGA-09-0367         TCGA-09-0369 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-09-1659         TCGA-09-1661         TCGA-09-1662 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-09-1664         TCGA-09-1665         TCGA-09-1666 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-09-1667         TCGA-09-1668         TCGA-09-1669 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-09-1670         TCGA-09-1672         TCGA-09-1673 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-09-1674         TCGA-09-1675         TCGA-09-2043 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-09-2044         TCGA-09-2045         TCGA-09-2048 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-09-2049         TCGA-09-2050         TCGA-09-2051 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-09-2053         TCGA-09-2054         TCGA-09-2055 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-09-2056         TCGA-10-0925         TCGA-10-0926 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-10-0927         TCGA-10-0928         TCGA-10-0930 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-10-0931         TCGA-10-0933         TCGA-10-0934 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-10-0935         TCGA-10-0936         TCGA-10-0937 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-10-0938         TCGA-13-0714         TCGA-13-0717 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0720         TCGA-13-0723         TCGA-13-0724 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0725         TCGA-13-0726         TCGA-13-0727 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-13-0730         TCGA-13-0751         TCGA-13-0755 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-13-0757         TCGA-13-0758         TCGA-13-0760 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-13-0761         TCGA-13-0762         TCGA-13-0764 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-13-0766         TCGA-13-0768         TCGA-13-0791 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-13-0792         TCGA-13-0793         TCGA-13-0794 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-13-0795         TCGA-13-0797         TCGA-13-0799 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-13-0800         TCGA-13-0801         TCGA-13-0802 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0803         TCGA-13-0804         TCGA-13-0805 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0807         TCGA-13-0883         TCGA-13-0884 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0885         TCGA-13-0886         TCGA-13-0887 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0888         TCGA-13-0889         TCGA-13-0890 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0891         TCGA-13-0893         TCGA-13-0897 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-13-0899         TCGA-13-0900         TCGA-13-0901 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0903         TCGA-13-0904         TCGA-13-0905 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-13-0906         TCGA-13-0908         TCGA-13-0910 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0911         TCGA-13-0912         TCGA-13-0913 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-0916         TCGA-13-0919         TCGA-13-0920 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-13-0921         TCGA-13-0923         TCGA-13-0924 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1403         TCGA-13-1404         TCGA-13-1405 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-13-1407         TCGA-13-1408         TCGA-13-1409 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1410         TCGA-13-1411         TCGA-13-1412 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1477         TCGA-13-1481         TCGA-13-1482 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1483         TCGA-13-1484         TCGA-13-1485 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-13-1487         TCGA-13-1488         TCGA-13-1489 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-13-1491         TCGA-13-1492         TCGA-13-1494 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1495         TCGA-13-1496         TCGA-13-1497 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1498         TCGA-13-1499         TCGA-13-1500 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1501         TCGA-13-1504         TCGA-13-1505 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1506         TCGA-13-1507         TCGA-13-1509 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-1510         TCGA-13-1511         TCGA-13-1512 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-13-2057         TCGA-13-2059         TCGA-13-2060 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-13-2061         TCGA-13-2065         TCGA-13-2071 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-20-0987         TCGA-20-0990         TCGA-20-0991 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-20-0996         TCGA-20-1682         TCGA-20-1683 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-20-1684         TCGA-20-1685         TCGA-20-1686 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-20-1687         TCGA-23-1021         TCGA-23-1022 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-23-1023         TCGA-23-1024         TCGA-23-1026 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-23-1027         TCGA-23-1028         TCGA-23-1029 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-23-1030         TCGA-23-1031         TCGA-23-1032 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-23-1109         TCGA-23-1110         TCGA-23-1111 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-23-1113         TCGA-23-1114         TCGA-23-1116 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-23-1117         TCGA-23-1118         TCGA-23-1119 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-23-1120         TCGA-23-1121         TCGA-23-1122 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-23-1123         TCGA-23-1124         TCGA-23-1809 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-23-2072         TCGA-23-2077         TCGA-23-2078 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-23-2079         TCGA-23-2081         TCGA-23-2084 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-23-2641         TCGA-23-2643         TCGA-23-2645 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-0966         TCGA-24-0968         TCGA-24-0970 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-0975         TCGA-24-0979         TCGA-24-0980 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-24-0982         TCGA-24-1103         TCGA-24-1104 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-1105         TCGA-24-1413         TCGA-24-1416 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1417         TCGA-24-1418         TCGA-24-1419 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1422         TCGA-24-1423         TCGA-24-1424 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1425         TCGA-24-1426         TCGA-24-1427 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1428         TCGA-24-1430         TCGA-24-1431 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-1434         TCGA-24-1435         TCGA-24-1436 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-24-1463         TCGA-24-1464         TCGA-24-1466 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1467         TCGA-24-1469         TCGA-24-1470 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-24-1471         TCGA-24-1474         TCGA-24-1544 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1545         TCGA-24-1546         TCGA-24-1548 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-1549         TCGA-24-1550         TCGA-24-1551 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-24-1552         TCGA-24-1553         TCGA-24-1555 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-1556         TCGA-24-1557         TCGA-24-1558 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-24-1560         TCGA-24-1562         TCGA-24-1563 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-24-1564         TCGA-24-1565         TCGA-24-1567 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1603         TCGA-24-1604         TCGA-24-1614 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1616         TCGA-24-1842         TCGA-24-1843 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1844         TCGA-24-1845         TCGA-24-1846 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-1847         TCGA-24-1849         TCGA-24-1850 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-1920         TCGA-24-1923         TCGA-24-1924 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-1927         TCGA-24-1928         TCGA-24-1930 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-2019         TCGA-24-2020         TCGA-24-2023 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-2024         TCGA-24-2026         TCGA-24-2027 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-2029         TCGA-24-2030         TCGA-24-2033 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-2035         TCGA-24-2036         TCGA-24-2038 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-24-2254         TCGA-24-2260         TCGA-24-2261 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-2262         TCGA-24-2267         TCGA-24-2271 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-24-2280         TCGA-24-2281         TCGA-24-2288 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-2289         TCGA-24-2290         TCGA-24-2293 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-24-2295         TCGA-24-2297         TCGA-24-2298 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-25-1312         TCGA-25-1313         TCGA-25-1314 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-25-1315         TCGA-25-1316         TCGA-25-1317 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-25-1318         TCGA-25-1319         TCGA-25-1320 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-25-1321         TCGA-25-1322         TCGA-25-1323 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-25-1329         TCGA-25-1623         TCGA-25-1625 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-25-1626         TCGA-25-1627         TCGA-25-1628 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-25-1630         TCGA-25-1631         TCGA-25-1632 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-25-1633         TCGA-25-1634         TCGA-25-1635 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-25-1870         TCGA-25-1871         TCGA-25-1877 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-25-1878         TCGA-25-2042         TCGA-25-2391 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-25-2392         TCGA-25-2393         TCGA-25-2396 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-25-2397         TCGA-25-2398         TCGA-25-2399 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-25-2400         TCGA-25-2401         TCGA-25-2404 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-25-2408         TCGA-25-2409         TCGA-29-1688 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-1690         TCGA-29-1691         TCGA-29-1693 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-29-1694         TCGA-29-1695         TCGA-29-1696 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-29-1697         TCGA-29-1698         TCGA-29-1699 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-1701         TCGA-29-1702         TCGA-29-1703 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-29-1705         TCGA-29-1707         TCGA-29-1710 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-1711         TCGA-29-1761         TCGA-29-1762 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-1763         TCGA-29-1764         TCGA-29-1766 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-29-1768         TCGA-29-1769         TCGA-29-1770 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-1771         TCGA-29-1774         TCGA-29-1775 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-29-1776         TCGA-29-1777         TCGA-29-1778 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-29-1781         TCGA-29-1783         TCGA-29-1784 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-1785         TCGA-29-2414         TCGA-29-2425 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-29-2427         TCGA-29-2428         TCGA-29-2429 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-2431         TCGA-29-2432         TCGA-29-2434 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-29-2436         TCGA-30-1714         TCGA-30-1718 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-30-1853         TCGA-30-1855         TCGA-30-1856 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-30-1857         TCGA-30-1859         TCGA-30-1860 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-30-1861         TCGA-30-1862         TCGA-30-1866 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-30-1867         TCGA-30-1880         TCGA-30-1887 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-30-1891         TCGA-30-1892         TCGA-31-1944 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-31-1946         TCGA-31-1950         TCGA-31-1951 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-31-1953         TCGA-31-1955         TCGA-31-1956 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-31-1959         TCGA-36-1568         TCGA-36-1569 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-36-1570         TCGA-36-1571         TCGA-36-1574 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-36-1575         TCGA-36-1576         TCGA-36-1577 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-36-1578         TCGA-36-1580         TCGA-36-1581 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-36-2529         TCGA-36-2530         TCGA-36-2532 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-36-2534         TCGA-36-2537         TCGA-36-2538 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-36-2540         TCGA-36-2542         TCGA-36-2543 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-36-2544         TCGA-36-2545         TCGA-36-2547 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-36-2548         TCGA-36-2549         TCGA-36-2551 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-36-2552         TCGA-42-2582         TCGA-42-2587 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-42-2588         TCGA-42-2589         TCGA-42-2590 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-42-2591         TCGA-42-2593         TCGA-57-1582 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-57-1583         TCGA-57-1584         TCGA-57-1585 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-57-1586         TCGA-57-1992         TCGA-57-1993 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-57-1994         TCGA-59-2348         TCGA-59-2349 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-59-2350         TCGA-59-2351         TCGA-59-2352 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-59-2354         TCGA-59-2355         TCGA-59-2363 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-59-2372         TCGA-61-1721         TCGA-61-1722 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-61-1724         TCGA-61-1725         TCGA-61-1727 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-61-1728         TCGA-61-1730         TCGA-61-1733 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-1734         TCGA-61-1736         TCGA-61-1737 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-61-1738         TCGA-61-1740         TCGA-61-1741 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-1743         TCGA-61-1895         TCGA-61-1899 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-61-1900         TCGA-61-1901         TCGA-61-1903 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-61-1904         TCGA-61-1906         TCGA-61-1907 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-1910         TCGA-61-1911         TCGA-61-1913 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-61-1914         TCGA-61-1915         TCGA-61-1917 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-1918         TCGA-61-1919         TCGA-61-1995 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-1998         TCGA-61-2000         TCGA-61-2002 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-61-2003         TCGA-61-2008         TCGA-61-2009 
  "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" 
        TCGA-61-2012         TCGA-61-2016         TCGA-61-2017 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-61-2018         TCGA-61-2087         TCGA-61-2088 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-2092         TCGA-61-2094         TCGA-61-2095 
"22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" "22Q LOSS WILD-TYPE" 
        TCGA-61-2096         TCGA-61-2097         TCGA-61-2098 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-2101         TCGA-61-2102         TCGA-61-2104 
"22Q LOSS WILD-TYPE"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-61-2109         TCGA-61-2110         TCGA-61-2111 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED" "22Q LOSS WILD-TYPE" 
        TCGA-61-2113         TCGA-61-2612         TCGA-61-2613 
  "22Q LOSS MUTATED"   "22Q LOSS MUTATED"   "22Q LOSS MUTATED" 
        TCGA-61-2614 
  "22Q LOSS MUTATED" 
[1] "hr=" "1.2"
D79V2, continuous
                    vv
clus                 OMENTUM OVARY PERITONEUM OVARY
  22Q LOSS MUTATED         1   405                1
  22Q LOSS WILD-TYPE       1   143                1
D79V3, multiclass
                  clus
vv                 22Q LOSS MUTATED 22Q LOSS WILD-TYPE
  OMENTUM                         1                  1
  OVARY                         405                143
  PERITONEUM OVARY                1                  1
D79V4, continuous
D79V5, binary
                    cls
clus                   0   1
  22Q LOSS MUTATED     3 413
  22Q LOSS WILD-TYPE   0 146
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  22Q LOSS MUTATED      3  413
  22Q LOSS WILD-TYPE    0  146
     clus
vv    22Q LOSS MUTATED 22Q LOSS WILD-TYPE
  NO                 3                  0
  YES              413                146
                    vv
clus                 R0 R1 R2
  22Q LOSS MUTATED    6 19  2
  22Q LOSS WILD-TYPE  8  7  0
D79V6, multiclass
    clus
vv   22Q LOSS MUTATED 22Q LOSS WILD-TYPE
  R0                6                  8
  R1               19                  7
  R2                2                  0

Clustering(80) Variable = XQ LOSS MUTATION ANALYSIS
D80V1, survival
                   sevent
clus2                 0   1
  XQ LOSS MUTATED   127 144
  XQ LOSS WILD-TYPE 134 142
  XQ LOSS MUTATED XQ LOSS WILD-TYPE 
              271               276 
  XQ LOSS MUTATED XQ LOSS WILD-TYPE 
              144               142 
$`XQ LOSS MUTATED`
TCGA-04-1331 TCGA-04-1332 TCGA-04-1336 TCGA-04-1343 TCGA-04-1347 TCGA-04-1348 
       40.24        41.00        49.15        11.87        63.06        48.76 
TCGA-04-1361 TCGA-04-1362 TCGA-04-1364 TCGA-04-1365 TCGA-04-1367 TCGA-04-1371 
       32.52        44.32        33.67        76.54        71.47        82.36 
TCGA-04-1514 TCGA-04-1517 TCGA-04-1530 TCGA-04-1536 TCGA-04-1638 TCGA-04-1644 
       56.55        19.99       119.08        29.06        55.40        48.89 
TCGA-04-1648 TCGA-04-1651 TCGA-04-1654 TCGA-09-0366 TCGA-09-0367 TCGA-09-0369 
       28.64        36.23        47.70        57.73        17.95        35.54 
TCGA-09-1659 TCGA-09-1661 TCGA-09-1662 TCGA-09-1664 TCGA-09-1666 TCGA-09-1667 
        9.96        38.43        89.33        74.89        57.57        61.87 
TCGA-09-1670 TCGA-09-1673 TCGA-09-1675 TCGA-09-2044 TCGA-09-2049 TCGA-09-2050 
       17.98         3.02        97.55         6.12       112.37        71.11 
TCGA-09-2051 TCGA-09-2053 TCGA-09-2054 TCGA-09-2055 TCGA-09-2056 TCGA-10-0925 
       63.09        39.75        20.91        26.93        12.46        54.31 
TCGA-10-0926 TCGA-10-0928 TCGA-10-0930 TCGA-10-0931 TCGA-10-0937 TCGA-10-0938 
       25.91        18.48        33.24        32.28        15.12        19.86 
TCGA-13-0714 TCGA-13-0725 TCGA-13-0758 TCGA-13-0760 TCGA-13-0766 TCGA-13-0791 
        6.21        12.39        11.38        11.54        21.40        38.93 
TCGA-13-0792 TCGA-13-0799 TCGA-13-0801 TCGA-13-0803 TCGA-13-0805 TCGA-13-0807 
       36.72         7.79         8.28        43.82        35.28        13.61 
TCGA-13-0883 TCGA-13-0887 TCGA-13-0889 TCGA-13-0891 TCGA-13-0900 TCGA-13-0903 
       68.91        66.64        61.81        69.01        57.07        47.38 
TCGA-13-0905 TCGA-13-0906 TCGA-13-0908 TCGA-13-0910 TCGA-13-0913 TCGA-13-0919 
       47.84        44.94        44.84        37.08        29.98        14.89 
TCGA-13-0924 TCGA-13-1405 TCGA-13-1407 TCGA-13-1408 TCGA-13-1412 TCGA-13-1482 
        6.08         7.36         6.05         5.92         5.33        61.71 
TCGA-13-1483 TCGA-13-1487 TCGA-13-1489 TCGA-13-1491 TCGA-13-1492 TCGA-13-1495 
       29.39        22.39        82.88        52.44        73.55        49.22 
TCGA-13-1496 TCGA-13-1497 TCGA-13-1498 TCGA-13-1499 TCGA-13-1500 TCGA-13-1507 
        4.24        54.31        37.61        38.37        13.97         4.77 
TCGA-13-1509 TCGA-13-1510 TCGA-13-1512 TCGA-13-2059 TCGA-13-2061 TCGA-20-1682 
        4.14         2.56         3.09        12.23        10.78        27.48 
TCGA-20-1683 TCGA-20-1684 TCGA-23-1022 TCGA-23-1027 TCGA-23-1028 TCGA-23-1029 
       25.38        19.07        42.51        31.73        49.41         8.81 
TCGA-23-1030 TCGA-23-1032 TCGA-23-1113 TCGA-23-1120 TCGA-23-1122 TCGA-23-1123 
       29.10         2.24        31.20         4.27        39.09        33.47 
TCGA-23-2079 TCGA-23-2081 TCGA-23-2641 TCGA-24-0966 TCGA-24-0970 TCGA-24-0980 
       91.66        77.00         2.76         7.63        11.64         7.66 
TCGA-24-1103 TCGA-24-1105 TCGA-24-1413 TCGA-24-1416 TCGA-24-1417 TCGA-24-1418 
       54.08        47.41         6.31         6.38         7.82         7.99 
TCGA-24-1419 TCGA-24-1423 TCGA-24-1424 TCGA-24-1425 TCGA-24-1426 TCGA-24-1427 
        7.86         6.25         6.02         5.95         5.36         4.80 
TCGA-24-1428 TCGA-24-1430 TCGA-24-1431 TCGA-24-1434 TCGA-24-1435 TCGA-24-1463 
       17.36        28.34        19.17        18.67        43.53        72.92 
TCGA-24-1464 TCGA-24-1466 TCGA-24-1469 TCGA-24-1470 TCGA-24-1471 TCGA-24-1546 
       12.46        45.14         9.11         3.42         1.18        64.27 
TCGA-24-1548 TCGA-24-1549 TCGA-24-1550 TCGA-24-1552 TCGA-24-1555 TCGA-24-1560 
       16.21        56.58        41.06        41.39        88.50        44.09 
TCGA-24-1562 TCGA-24-1567 TCGA-24-1603 TCGA-24-1614 TCGA-24-1845 TCGA-24-1849 
       45.50        17.23        90.15        48.33         3.81         5.75 
TCGA-24-1930 TCGA-24-2023 TCGA-24-2024 TCGA-24-2027 TCGA-24-2029 TCGA-24-2030 
       81.11        44.84        58.16       109.68        14.43        53.95 
TCGA-24-2033 TCGA-24-2035 TCGA-24-2036 TCGA-24-2254 TCGA-24-2260 TCGA-24-2262 
       18.48        28.18        64.01        57.07        36.16         0.36 
TCGA-24-2271 TCGA-24-2280 TCGA-24-2288 TCGA-24-2289 TCGA-24-2290 TCGA-24-2297 
       31.63        70.45         0.82        67.36        36.23        55.86 
TCGA-24-2298 TCGA-25-1312 TCGA-25-1314 TCGA-25-1315 TCGA-25-1316 TCGA-25-1318 
       53.26         1.02        31.99        51.06        37.02        34.98 
TCGA-25-1322 TCGA-25-1625 TCGA-25-1630 TCGA-25-1631 TCGA-25-1635 TCGA-25-1870 
        2.99        18.02         7.86         0.30        51.22        14.93 
TCGA-25-1878 TCGA-25-2042 TCGA-25-2391 TCGA-25-2392 TCGA-25-2396 TCGA-25-2399 
       85.05        13.02        49.05         1.02         3.02        19.99 
TCGA-25-2409 TCGA-29-1688 TCGA-29-1693 TCGA-29-1694 TCGA-29-1696 TCGA-29-1697 
       26.96        78.87       101.75        38.53        33.70        31.17 
TCGA-29-1702 TCGA-29-1703 TCGA-29-1705 TCGA-29-1707 TCGA-29-1711 TCGA-29-1761 
       18.64        59.67        18.25        41.95        34.62        17.00 
TCGA-29-1762 TCGA-29-1769 TCGA-29-1771 TCGA-29-1775 TCGA-29-1777 TCGA-29-1781 
       85.68        22.98        22.52        12.36        12.30         8.35 
TCGA-29-1784 TCGA-29-1785 TCGA-29-2414 TCGA-29-2427 TCGA-29-2431 TCGA-29-2432 
        5.36        34.62        86.17        62.47        42.25        11.84 
TCGA-30-1714 TCGA-30-1853 TCGA-30-1857 TCGA-30-1866 TCGA-30-1880 TCGA-30-1891 
       38.07        36.26         0.26        36.62        57.57        30.05 
TCGA-31-1944 TCGA-31-1953 TCGA-31-1955 TCGA-31-1956 TCGA-36-1569 TCGA-36-1570 
       45.57         6.71        42.51        44.09        29.06        21.53 
TCGA-36-1574 TCGA-36-1575 TCGA-36-1577 TCGA-36-1578 TCGA-36-2530 TCGA-36-2532 
       22.55         8.55        25.74        27.85        33.01        29.49 
TCGA-36-2534 TCGA-36-2537 TCGA-36-2538 TCGA-36-2542 TCGA-36-2545 TCGA-36-2547 
       29.79        25.91        25.08        21.60        18.31        20.52 
TCGA-42-2582 TCGA-42-2589 TCGA-42-2591 TCGA-42-2593 TCGA-57-1585 TCGA-57-1992 
       26.04         7.56        22.39         1.48         1.74        28.96 
TCGA-57-1993 TCGA-57-1994 TCGA-59-2350 TCGA-59-2354 TCGA-59-2363 TCGA-61-1724 
       25.05        25.02        22.32        34.39         5.39        20.94 
TCGA-61-1725 TCGA-61-1727 TCGA-61-1733 TCGA-61-1736 TCGA-61-1737 TCGA-61-1738 
       31.40        18.54        31.76        48.79        44.84        35.80 
TCGA-61-1743 TCGA-61-1901 TCGA-61-1903 TCGA-61-1906 TCGA-61-1913 TCGA-61-1918 
       43.69        11.41        13.02        34.13        48.92        15.75 
TCGA-61-1919 TCGA-61-1995 TCGA-61-2002 TCGA-61-2008 TCGA-61-2012 TCGA-61-2016 
       38.17         1.97        17.98        30.61        30.64         1.18 
TCGA-61-2088 TCGA-61-2096 TCGA-61-2098 TCGA-61-2104 TCGA-61-2110 TCGA-61-2113 
        4.77        58.39        65.49        76.83        44.52        22.22 
TCGA-61-2613 
       31.07 

$`XQ LOSS WILD-TYPE`
TCGA-04-1335 TCGA-04-1337 TCGA-04-1338 TCGA-04-1342 TCGA-04-1346 TCGA-04-1349 
        1.81         2.01        46.62        18.51        65.49        21.57 
TCGA-04-1350 TCGA-04-1351 TCGA-04-1356 TCGA-04-1516 TCGA-04-1525 TCGA-04-1542 
       63.98        65.46        49.28        41.59        38.37        84.20 
TCGA-04-1646 TCGA-04-1649 TCGA-04-1652 TCGA-04-1655 TCGA-09-0364 TCGA-09-0365 
       27.88        64.64        31.86        45.34        29.16         9.47 
TCGA-09-1665 TCGA-09-1668 TCGA-09-1669 TCGA-09-1672 TCGA-09-1674 TCGA-09-2043 
       41.59        55.36        30.48         5.85         8.55         6.15 
TCGA-09-2045 TCGA-09-2048 TCGA-10-0927 TCGA-10-0933 TCGA-10-0934 TCGA-10-0935 
       35.15         4.50        81.47        11.70         3.88        35.41 
TCGA-10-0936 TCGA-13-0717 TCGA-13-0720 TCGA-13-0723 TCGA-13-0724 TCGA-13-0726 
       35.80        24.59        44.55        39.58         2.73        31.07 
TCGA-13-0727 TCGA-13-0730 TCGA-13-0751 TCGA-13-0755 TCGA-13-0757 TCGA-13-0761 
       15.19        17.79        55.17         2.47        11.18        34.06 
TCGA-13-0762 TCGA-13-0764 TCGA-13-0768 TCGA-13-0793 TCGA-13-0794 TCGA-13-0795 
       32.25        31.04         8.42        28.70        30.35        19.56 
TCGA-13-0797 TCGA-13-0800 TCGA-13-0802 TCGA-13-0804 TCGA-13-0884 TCGA-13-0885 
        8.71         8.12         8.19        35.28       107.18        91.40 
TCGA-13-0886 TCGA-13-0888 TCGA-13-0890 TCGA-13-0893 TCGA-13-0897 TCGA-13-0899 
       74.27        70.39        67.99        43.36        57.47        56.15 
TCGA-13-0901 TCGA-13-0904 TCGA-13-0911 TCGA-13-0912 TCGA-13-0916 TCGA-13-0920 
       19.36        48.33        27.68        34.06        21.14        13.81 
TCGA-13-0921 TCGA-13-0923 TCGA-13-1403 TCGA-13-1404 TCGA-13-1409 TCGA-13-1410 
        4.64         6.41        10.88         6.61         6.84         4.70 
TCGA-13-1411 TCGA-13-1477 TCGA-13-1481 TCGA-13-1484 TCGA-13-1485 TCGA-13-1488 
        4.21        54.61        87.06        98.04        20.68        70.82 
TCGA-13-1494 TCGA-13-1501 TCGA-13-1504 TCGA-13-1505 TCGA-13-1506 TCGA-13-1511 
       38.17        32.84        16.57         4.21         4.41         3.88 
TCGA-13-2057 TCGA-13-2060 TCGA-13-2065 TCGA-13-2071 TCGA-20-0987 TCGA-20-0990 
       14.24         8.58         8.75         6.28        23.05        25.94 
TCGA-20-0991 TCGA-20-0996 TCGA-20-1685 TCGA-20-1686 TCGA-20-1687 TCGA-23-1021 
       26.20        72.20        16.67         2.93         2.66        47.54 
TCGA-23-1023 TCGA-23-1024 TCGA-23-1026 TCGA-23-1031 TCGA-23-1109 TCGA-23-1110 
       40.54        15.39        26.83        18.87        51.35        54.51 
TCGA-23-1111 TCGA-23-1114 TCGA-23-1116 TCGA-23-1117 TCGA-23-1118 TCGA-23-1119 
        3.22        68.68         4.57        33.30        86.01       129.96 
TCGA-23-1121 TCGA-23-1124 TCGA-23-1809 TCGA-23-2072 TCGA-23-2077 TCGA-23-2078 
        6.38        58.13         0.53        24.95       115.89        87.48 
TCGA-23-2084 TCGA-23-2643 TCGA-23-2645 TCGA-24-0968 TCGA-24-0975 TCGA-24-0979 
       49.84         4.70         4.50        19.63        21.80        41.56 
TCGA-24-0982 TCGA-24-1104 TCGA-24-1422 TCGA-24-1436 TCGA-24-1467 TCGA-24-1474 
       22.32        63.55         0.76         8.55       105.99        22.19 
TCGA-24-1544 TCGA-24-1545 TCGA-24-1551 TCGA-24-1553 TCGA-24-1556 TCGA-24-1557 
       26.96        57.37        51.91        58.09        70.62        39.88 
TCGA-24-1558 TCGA-24-1563 TCGA-24-1564 TCGA-24-1565 TCGA-24-1604 TCGA-24-1616 
       19.53        47.70        25.87        10.26        88.34        38.24 
TCGA-24-1842 TCGA-24-1843 TCGA-24-1844 TCGA-24-1846 TCGA-24-1847 TCGA-24-1850 
        8.32         3.48         3.72         4.37        11.28         5.49 
TCGA-24-1920 TCGA-24-1923 TCGA-24-1924 TCGA-24-1927 TCGA-24-1928 TCGA-24-2019 
        9.80        22.65        30.21        16.41        11.05         4.87 
TCGA-24-2020 TCGA-24-2026 TCGA-24-2038 TCGA-24-2261 TCGA-24-2267 TCGA-24-2281 
      151.99        34.82        44.48         0.79        47.54        44.58 
TCGA-24-2293 TCGA-24-2295 TCGA-25-1313 TCGA-25-1317 TCGA-25-1319 TCGA-25-1320 
       16.64        33.11        26.93         1.02        65.00        36.95 
TCGA-25-1321 TCGA-25-1323 TCGA-25-1329 TCGA-25-1623 TCGA-25-1626 TCGA-25-1627 
       33.96        12.00         2.96        18.58        15.78         0.36 
TCGA-25-1628 TCGA-25-1632 TCGA-25-1633 TCGA-25-1634 TCGA-25-1871 TCGA-25-1877 
       20.58        56.94        60.59        35.54        24.99        18.05 
TCGA-25-2393 TCGA-25-2397 TCGA-25-2398 TCGA-25-2400 TCGA-25-2401 TCGA-25-2404 
       38.04        12.00        45.01        42.02         2.96        29.00 
TCGA-25-2408 TCGA-29-1690 TCGA-29-1691 TCGA-29-1695 TCGA-29-1698 TCGA-29-1699 
       30.97        44.71        47.18         0.79        68.28         0.53 
TCGA-29-1701 TCGA-29-1710 TCGA-29-1763 TCGA-29-1764 TCGA-29-1766 TCGA-29-1768 
       16.90        29.23        66.77        62.93        39.09        31.23 
TCGA-29-1770 TCGA-29-1774 TCGA-29-1776 TCGA-29-1778 TCGA-29-1783 TCGA-29-2425 
       24.36        17.29        11.84        14.93         7.20        65.00 
TCGA-29-2428 TCGA-29-2429 TCGA-29-2434 TCGA-29-2436 TCGA-30-1718 TCGA-30-1855 
       45.11         4.87        11.47         9.76        51.91         2.47 
TCGA-30-1856 TCGA-30-1859 TCGA-30-1860 TCGA-30-1861 TCGA-30-1862 TCGA-30-1867 
       15.68        48.07        44.91        34.78         6.08         1.18 
TCGA-30-1887 TCGA-30-1892 TCGA-31-1946 TCGA-31-1950 TCGA-31-1951 TCGA-31-1959 
       24.26        48.79        30.18        18.77        22.45         2.17 
TCGA-36-1568 TCGA-36-1571 TCGA-36-1576 TCGA-36-1580 TCGA-36-1581 TCGA-36-2529 
       28.73        22.85        30.05        24.23        24.69        35.05 
TCGA-36-2540 TCGA-36-2543 TCGA-36-2544 TCGA-36-2548 TCGA-36-2549 TCGA-36-2551 
       23.80         2.24        20.98        14.17         6.05        16.14 
TCGA-36-2552 TCGA-42-2587 TCGA-42-2588 TCGA-42-2590 TCGA-57-1582 TCGA-57-1583 
       11.47        23.74         9.44         7.46        24.03        11.38 
TCGA-57-1584 TCGA-57-1586 TCGA-59-2348 TCGA-59-2349 TCGA-59-2351 TCGA-59-2352 
       21.14        22.32       180.16        80.12       116.12         9.40 
TCGA-59-2355 TCGA-59-2372 TCGA-61-1721 TCGA-61-1722 TCGA-61-1728 TCGA-61-1730 
        2.14        44.78        11.11         8.05        27.88         4.34 
TCGA-61-1734 TCGA-61-1740 TCGA-61-1741 TCGA-61-1895 TCGA-61-1899 TCGA-61-1900 
       28.47         2.43        33.67         1.41         8.42         5.79 
TCGA-61-1904 TCGA-61-1907 TCGA-61-1910 TCGA-61-1911 TCGA-61-1914 TCGA-61-1915 
        9.07        31.30        37.02        42.48        56.58        67.73 
TCGA-61-1917 TCGA-61-1998 TCGA-61-2000 TCGA-61-2003 TCGA-61-2009 TCGA-61-2017 
       43.43         5.52        14.50         3.98        39.85        45.96 
TCGA-61-2018 TCGA-61-2087 TCGA-61-2092 TCGA-61-2094 TCGA-61-2095 TCGA-61-2097 
       45.40         4.80        51.72        71.74        61.64        60.62 
TCGA-61-2101 TCGA-61-2102 TCGA-61-2109 TCGA-61-2111 TCGA-61-2612 TCGA-61-2614 
       55.50         6.48        20.68       125.72         6.35         8.58 

  XQ LOSS MUTATED XQ LOSS WILD-TYPE 
             0.26              0.36 
  XQ LOSS MUTATED XQ LOSS WILD-TYPE 
           119.08            180.16 
  XQ LOSS MUTATED XQ LOSS WILD-TYPE 
            30.05             24.82 
[1] "0.3 - 119.1 (30.1)" "0.4 - 180.2 (24.8)"
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-04-1331        TCGA-04-1332        TCGA-04-1335        TCGA-04-1336 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-04-1337        TCGA-04-1338        TCGA-04-1342        TCGA-04-1343 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-04-1346        TCGA-04-1347        TCGA-04-1348        TCGA-04-1349 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-04-1350        TCGA-04-1351        TCGA-04-1356        TCGA-04-1361 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-04-1362        TCGA-04-1364        TCGA-04-1365        TCGA-04-1367 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-04-1371        TCGA-04-1514        TCGA-04-1516        TCGA-04-1517 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-04-1525        TCGA-04-1530        TCGA-04-1536        TCGA-04-1542 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-04-1638        TCGA-04-1644        TCGA-04-1646        TCGA-04-1648 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-04-1649        TCGA-04-1651        TCGA-04-1652        TCGA-04-1654 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-04-1655        TCGA-09-0364        TCGA-09-0365        TCGA-09-0366 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-09-0367        TCGA-09-0369        TCGA-09-1659        TCGA-09-1661 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-09-1662        TCGA-09-1664        TCGA-09-1665        TCGA-09-1666 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-09-1667        TCGA-09-1668        TCGA-09-1669        TCGA-09-1670 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-09-1672        TCGA-09-1673        TCGA-09-1674        TCGA-09-1675 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-09-2043        TCGA-09-2044        TCGA-09-2045        TCGA-09-2048 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-09-2049        TCGA-09-2050        TCGA-09-2051        TCGA-09-2053 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-09-2054        TCGA-09-2055        TCGA-09-2056        TCGA-10-0925 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-10-0926        TCGA-10-0927        TCGA-10-0928        TCGA-10-0930 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-10-0931        TCGA-10-0933        TCGA-10-0934        TCGA-10-0935 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-10-0936        TCGA-10-0937        TCGA-10-0938        TCGA-13-0714 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-13-0717        TCGA-13-0720        TCGA-13-0723        TCGA-13-0724 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-0725        TCGA-13-0726        TCGA-13-0727        TCGA-13-0730 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-0751        TCGA-13-0755        TCGA-13-0757        TCGA-13-0758 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-13-0760        TCGA-13-0761        TCGA-13-0762        TCGA-13-0764 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-0766        TCGA-13-0768        TCGA-13-0791        TCGA-13-0792 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-13-0793        TCGA-13-0794        TCGA-13-0795        TCGA-13-0797 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-0799        TCGA-13-0800        TCGA-13-0801        TCGA-13-0802 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-13-0803        TCGA-13-0804        TCGA-13-0805        TCGA-13-0807 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-13-0883        TCGA-13-0884        TCGA-13-0885        TCGA-13-0886 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-0887        TCGA-13-0888        TCGA-13-0889        TCGA-13-0890 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-13-0891        TCGA-13-0893        TCGA-13-0897        TCGA-13-0899 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-0900        TCGA-13-0901        TCGA-13-0903        TCGA-13-0904 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-13-0905        TCGA-13-0906        TCGA-13-0908        TCGA-13-0910 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-13-0911        TCGA-13-0912        TCGA-13-0913        TCGA-13-0916 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-13-0919        TCGA-13-0920        TCGA-13-0921        TCGA-13-0923 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-0924        TCGA-13-1403        TCGA-13-1404        TCGA-13-1405 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-13-1407        TCGA-13-1408        TCGA-13-1409        TCGA-13-1410 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-1411        TCGA-13-1412        TCGA-13-1477        TCGA-13-1481 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-1482        TCGA-13-1483        TCGA-13-1484        TCGA-13-1485 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-1487        TCGA-13-1488        TCGA-13-1489        TCGA-13-1491 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-13-1492        TCGA-13-1494        TCGA-13-1495        TCGA-13-1496 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-13-1497        TCGA-13-1498        TCGA-13-1499        TCGA-13-1500 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-13-1501        TCGA-13-1504        TCGA-13-1505        TCGA-13-1506 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-13-1507        TCGA-13-1509        TCGA-13-1510        TCGA-13-1511 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-13-1512        TCGA-13-2057        TCGA-13-2059        TCGA-13-2060 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-13-2061        TCGA-13-2065        TCGA-13-2071        TCGA-20-0987 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-20-0990        TCGA-20-0991        TCGA-20-0996        TCGA-20-1682 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-20-1683        TCGA-20-1684        TCGA-20-1685        TCGA-20-1686 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-20-1687        TCGA-23-1021        TCGA-23-1022        TCGA-23-1023 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-23-1024        TCGA-23-1026        TCGA-23-1027        TCGA-23-1028 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-23-1029        TCGA-23-1030        TCGA-23-1031        TCGA-23-1032 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-23-1109        TCGA-23-1110        TCGA-23-1111        TCGA-23-1113 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-23-1114        TCGA-23-1116        TCGA-23-1117        TCGA-23-1118 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-23-1119        TCGA-23-1120        TCGA-23-1121        TCGA-23-1122 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-23-1123        TCGA-23-1124        TCGA-23-1809        TCGA-23-2072 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-23-2077        TCGA-23-2078        TCGA-23-2079        TCGA-23-2081 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-23-2084        TCGA-23-2641        TCGA-23-2643        TCGA-23-2645 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-24-0966        TCGA-24-0968        TCGA-24-0970        TCGA-24-0975 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-24-0979        TCGA-24-0980        TCGA-24-0982        TCGA-24-1103 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-24-1104        TCGA-24-1105        TCGA-24-1413        TCGA-24-1416 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-24-1417        TCGA-24-1418        TCGA-24-1419        TCGA-24-1422 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-24-1423        TCGA-24-1424        TCGA-24-1425        TCGA-24-1426 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-24-1427        TCGA-24-1428        TCGA-24-1430        TCGA-24-1431 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-24-1434        TCGA-24-1435        TCGA-24-1436        TCGA-24-1463 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-24-1464        TCGA-24-1466        TCGA-24-1467        TCGA-24-1469 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-24-1470        TCGA-24-1471        TCGA-24-1474        TCGA-24-1544 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-24-1545        TCGA-24-1546        TCGA-24-1548        TCGA-24-1549 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-24-1550        TCGA-24-1551        TCGA-24-1552        TCGA-24-1553 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-24-1555        TCGA-24-1556        TCGA-24-1557        TCGA-24-1558 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-24-1560        TCGA-24-1562        TCGA-24-1563        TCGA-24-1564 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-24-1565        TCGA-24-1567        TCGA-24-1603        TCGA-24-1604 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-24-1614        TCGA-24-1616        TCGA-24-1842        TCGA-24-1843 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-24-1844        TCGA-24-1845        TCGA-24-1846        TCGA-24-1847 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-24-1849        TCGA-24-1850        TCGA-24-1920        TCGA-24-1923 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-24-1924        TCGA-24-1927        TCGA-24-1928        TCGA-24-1930 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-24-2019        TCGA-24-2020        TCGA-24-2023        TCGA-24-2024 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-24-2026        TCGA-24-2027        TCGA-24-2029        TCGA-24-2030 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-24-2033        TCGA-24-2035        TCGA-24-2036        TCGA-24-2038 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-24-2254        TCGA-24-2260        TCGA-24-2261        TCGA-24-2262 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-24-2267        TCGA-24-2271        TCGA-24-2280        TCGA-24-2281 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-24-2288        TCGA-24-2289        TCGA-24-2290        TCGA-24-2293 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-24-2295        TCGA-24-2297        TCGA-24-2298        TCGA-25-1312 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-25-1313        TCGA-25-1314        TCGA-25-1315        TCGA-25-1316 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-25-1317        TCGA-25-1318        TCGA-25-1319        TCGA-25-1320 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-25-1321        TCGA-25-1322        TCGA-25-1323        TCGA-25-1329 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-25-1623        TCGA-25-1625        TCGA-25-1626        TCGA-25-1627 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-25-1628        TCGA-25-1630        TCGA-25-1631        TCGA-25-1632 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-25-1633        TCGA-25-1634        TCGA-25-1635        TCGA-25-1870 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-25-1871        TCGA-25-1877        TCGA-25-1878        TCGA-25-2042 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-25-2391        TCGA-25-2392        TCGA-25-2393        TCGA-25-2396 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-25-2397        TCGA-25-2398        TCGA-25-2399        TCGA-25-2400 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-25-2401        TCGA-25-2404        TCGA-25-2408        TCGA-25-2409 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-29-1688        TCGA-29-1690        TCGA-29-1691        TCGA-29-1693 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-29-1694        TCGA-29-1695        TCGA-29-1696        TCGA-29-1697 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-29-1698        TCGA-29-1699        TCGA-29-1701        TCGA-29-1702 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-29-1703        TCGA-29-1705        TCGA-29-1707        TCGA-29-1710 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-29-1711        TCGA-29-1761        TCGA-29-1762        TCGA-29-1763 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-29-1764        TCGA-29-1766        TCGA-29-1768        TCGA-29-1769 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-29-1770        TCGA-29-1771        TCGA-29-1774        TCGA-29-1775 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-29-1776        TCGA-29-1777        TCGA-29-1778        TCGA-29-1781 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-29-1783        TCGA-29-1784        TCGA-29-1785        TCGA-29-2414 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-29-2425        TCGA-29-2427        TCGA-29-2428        TCGA-29-2429 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-29-2431        TCGA-29-2432        TCGA-29-2434        TCGA-29-2436 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-30-1714        TCGA-30-1718        TCGA-30-1853        TCGA-30-1855 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-30-1856        TCGA-30-1857        TCGA-30-1859        TCGA-30-1860 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-30-1861        TCGA-30-1862        TCGA-30-1866        TCGA-30-1867 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-30-1880        TCGA-30-1887        TCGA-30-1891        TCGA-30-1892 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-31-1944        TCGA-31-1946        TCGA-31-1950        TCGA-31-1951 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-31-1953        TCGA-31-1955        TCGA-31-1956        TCGA-31-1959 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-36-1568        TCGA-36-1569        TCGA-36-1570        TCGA-36-1571 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-36-1574        TCGA-36-1575        TCGA-36-1576        TCGA-36-1577 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-36-1578        TCGA-36-1580        TCGA-36-1581        TCGA-36-2529 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-36-2530        TCGA-36-2532        TCGA-36-2534        TCGA-36-2537 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-36-2538        TCGA-36-2540        TCGA-36-2542        TCGA-36-2543 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-36-2544        TCGA-36-2545        TCGA-36-2547        TCGA-36-2548 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-36-2549        TCGA-36-2551        TCGA-36-2552        TCGA-42-2582 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-42-2587        TCGA-42-2588        TCGA-42-2589        TCGA-42-2590 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-42-2591        TCGA-42-2593        TCGA-57-1582        TCGA-57-1583 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-57-1584        TCGA-57-1585        TCGA-57-1586        TCGA-57-1992 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-57-1993        TCGA-57-1994        TCGA-59-2348        TCGA-59-2349 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-59-2350        TCGA-59-2351        TCGA-59-2352        TCGA-59-2354 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-59-2355        TCGA-59-2363        TCGA-59-2372        TCGA-61-1721 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-61-1722        TCGA-61-1724        TCGA-61-1725        TCGA-61-1727 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" 
       TCGA-61-1728        TCGA-61-1730        TCGA-61-1733        TCGA-61-1734 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-61-1736        TCGA-61-1737        TCGA-61-1738        TCGA-61-1740 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-61-1741        TCGA-61-1743        TCGA-61-1895        TCGA-61-1899 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-61-1900        TCGA-61-1901        TCGA-61-1903        TCGA-61-1904 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-61-1906        TCGA-61-1907        TCGA-61-1910        TCGA-61-1911 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-61-1913        TCGA-61-1914        TCGA-61-1915        TCGA-61-1917 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE" 
       TCGA-61-1918        TCGA-61-1919        TCGA-61-1995        TCGA-61-1998 
  "XQ LOSS MUTATED"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-61-2000        TCGA-61-2002        TCGA-61-2003        TCGA-61-2008 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-61-2009        TCGA-61-2012        TCGA-61-2016        TCGA-61-2017 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-61-2018        TCGA-61-2087        TCGA-61-2088        TCGA-61-2092 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-61-2094        TCGA-61-2095        TCGA-61-2096        TCGA-61-2097 
"XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
       TCGA-61-2098        TCGA-61-2101        TCGA-61-2102        TCGA-61-2104 
  "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-61-2109        TCGA-61-2110        TCGA-61-2111        TCGA-61-2113 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" 
       TCGA-61-2612        TCGA-61-2613        TCGA-61-2614 
"XQ LOSS WILD-TYPE"   "XQ LOSS MUTATED" "XQ LOSS WILD-TYPE" 
[1] "hr=" "1"  
D80V2, continuous
                   vv
clus                OMENTUM OVARY PERITONEUM OVARY
  XQ LOSS MUTATED         1   271                0
  XQ LOSS WILD-TYPE       1   277                2
D80V3, multiclass
                  clus
vv                 XQ LOSS MUTATED XQ LOSS WILD-TYPE
  OMENTUM                        1                 1
  OVARY                        271               277
  PERITONEUM OVARY               0                 2
D80V4, continuous
D80V5, binary
                   cls
clus                  0   1
  XQ LOSS MUTATED     3 278
  XQ LOSS WILD-TYPE   0 281
[1] "tbl2"
                   cls
clus                [,1] [,2]
  XQ LOSS MUTATED      3  278
  XQ LOSS WILD-TYPE    0  281
     clus
vv    XQ LOSS MUTATED XQ LOSS WILD-TYPE
  NO                3                 0
  YES             278               281
                   vv
clus                R0 R1 R2
  XQ LOSS MUTATED    8 12  1
  XQ LOSS WILD-TYPE  6 14  1
D80V6, multiclass
    clus
vv   XQ LOSS MUTATED XQ LOSS WILD-TYPE
  R0               8                 6
  R1              12                14
  R2               1                 1
> q(save="no")
