
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/12/Correlate_Genomic_Events.R")
> result <- main("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/12/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-tTRUE", "-iD=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/PRAD-TP/4430098/transformed.cor.cli.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPicker/PRAD-TP/4401844/PRAD-TP.clin.merged.picked.txt", "-fF=", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=PRAD-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=PRAD-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPicker/PRAD-TP/4401844/PRAD-TP.clin.merged.picked.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/PRAD-TP/4430098/transformed.cor.cli.txt"

nPatients in clinical file=166, in cluster file=197, common to both=160
[1]  46 160
[1] "AMP PEAK  1(1Q21.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE 
                           13                           147 
  AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE 
                           13                           147 
[1] "AMP PEAK  2(3Q26.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE 
                           25                           135 
  AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE 
                           25                           135 
[1] "AMP PEAK  3(7P15.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE 
                           32                           128 
  AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE 
                           32                           128 
[1] "AMP PEAK  4(7Q34) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  4(7Q34) MUTATED AMP PEAK  4(7Q34) WILD-TYPE 
                         29                         131 
  AMP PEAK  4(7Q34) MUTATED AMP PEAK  4(7Q34) WILD-TYPE 
                         29                         131 
[1] "AMP PEAK  5(8P11.22) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  5(8P11.22) MUTATED AMP PEAK  5(8P11.22) WILD-TYPE 
                            16                            144 
  AMP PEAK  5(8P11.22) MUTATED AMP PEAK  5(8P11.22) WILD-TYPE 
                            16                            144 
[1] "AMP PEAK  6(8Q24.21) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  6(8Q24.21) MUTATED AMP PEAK  6(8Q24.21) WILD-TYPE 
                            42                            118 
  AMP PEAK  6(8Q24.21) MUTATED AMP PEAK  6(8Q24.21) WILD-TYPE 
                            42                            118 
[1] "AMP PEAK  7(9Q34.3) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  7(9Q34.3) MUTATED AMP PEAK  7(9Q34.3) WILD-TYPE 
                           15                           145 
  AMP PEAK  7(9Q34.3) MUTATED AMP PEAK  7(9Q34.3) WILD-TYPE 
                           15                           145 
[1] "AMP PEAK  8(11Q13.2) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  8(11Q13.2) MUTATED AMP PEAK  8(11Q13.2) WILD-TYPE 
                             9                            151 
  AMP PEAK  8(11Q13.2) MUTATED AMP PEAK  8(11Q13.2) WILD-TYPE 
                             9                            151 
[1] "AMP PEAK  9(12Q24.32) MUTATION ANALYSIS"
[1] 3
  AMP PEAK  9(12Q24.32) MUTATED AMP PEAK  9(12Q24.32) WILD-TYPE 
                              7                             153 
  AMP PEAK  9(12Q24.32) MUTATED AMP PEAK  9(12Q24.32) WILD-TYPE 
                              7                             153 
[1] "AMP PEAK 10(14Q21.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 10(14Q21.1) MUTATED AMP PEAK 10(14Q21.1) WILD-TYPE 
                             8                            152 
  AMP PEAK 10(14Q21.1) MUTATED AMP PEAK 10(14Q21.1) WILD-TYPE 
                             8                            152 
[1] "AMP PEAK 11(20Q13.33) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 11(20Q13.33) MUTATED AMP PEAK 11(20Q13.33) WILD-TYPE 
                             12                             148 
  AMP PEAK 11(20Q13.33) MUTATED AMP PEAK 11(20Q13.33) WILD-TYPE 
                             12                             148 
[1] "AMP PEAK 12(XP22.11) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 12(XP22.11) MUTATED AMP PEAK 12(XP22.11) WILD-TYPE 
                             6                            154 
  AMP PEAK 12(XP22.11) MUTATED AMP PEAK 12(XP22.11) WILD-TYPE 
                             6                            154 
[1] "AMP PEAK 13(XP22.11) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 13(XP22.11) MUTATED AMP PEAK 13(XP22.11) WILD-TYPE 
                             6                            154 
  AMP PEAK 13(XP22.11) MUTATED AMP PEAK 13(XP22.11) WILD-TYPE 
                             6                            154 
[1] "AMP PEAK 14(XP21.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 14(XP21.1) MUTATED AMP PEAK 14(XP21.1) WILD-TYPE 
                            5                           155 
  AMP PEAK 14(XP21.1) MUTATED AMP PEAK 14(XP21.1) WILD-TYPE 
                            5                           155 
[1] "AMP PEAK 15(XQ12) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 15(XQ12) MUTATED AMP PEAK 15(XQ12) WILD-TYPE 
                          3                         157 
  AMP PEAK 15(XQ12) MUTATED AMP PEAK 15(XQ12) WILD-TYPE 
                          3                         157 
[1] "AMP PEAK 16(XQ21.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 16(XQ21.1) MUTATED AMP PEAK 16(XQ21.1) WILD-TYPE 
                            7                           153 
  AMP PEAK 16(XQ21.1) MUTATED AMP PEAK 16(XQ21.1) WILD-TYPE 
                            7                           153 
[1] "AMP PEAK 17(XQ21.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 17(XQ21.1) MUTATED AMP PEAK 17(XQ21.1) WILD-TYPE 
                            5                           155 
  AMP PEAK 17(XQ21.1) MUTATED AMP PEAK 17(XQ21.1) WILD-TYPE 
                            5                           155 
[1] "AMP PEAK 18(XQ21.31) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 18(XQ21.31) MUTATED AMP PEAK 18(XQ21.31) WILD-TYPE 
                             5                            155 
  AMP PEAK 18(XQ21.31) MUTATED AMP PEAK 18(XQ21.31) WILD-TYPE 
                             5                            155 
[1] "AMP PEAK 19(XQ25) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 19(XQ25) MUTATED AMP PEAK 19(XQ25) WILD-TYPE 
                          3                         157 
  AMP PEAK 19(XQ25) MUTATED AMP PEAK 19(XQ25) WILD-TYPE 
                          3                         157 
[1] "AMP PEAK 20(XQ25) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 20(XQ25) MUTATED AMP PEAK 20(XQ25) WILD-TYPE 
                          6                         154 
  AMP PEAK 20(XQ25) MUTATED AMP PEAK 20(XQ25) WILD-TYPE 
                          6                         154 
[1] "AMP PEAK 21(XQ27.1) MUTATION ANALYSIS"
[1] 3
  AMP PEAK 21(XQ27.1) MUTATED AMP PEAK 21(XQ27.1) WILD-TYPE 
                            9                           151 
  AMP PEAK 21(XQ27.1) MUTATED AMP PEAK 21(XQ27.1) WILD-TYPE 
                            9                           151 
[1] "DEL PEAK  1(1P31.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE 
                           21                           139 
  DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE 
                           21                           139 
[1] "DEL PEAK  2(1Q42.13) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  2(1Q42.13) MUTATED DEL PEAK  2(1Q42.13) WILD-TYPE 
                            15                            145 
  DEL PEAK  2(1Q42.13) MUTATED DEL PEAK  2(1Q42.13) WILD-TYPE 
                            15                            145 
[1] "DEL PEAK  3(2Q22.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE 
                           20                           140 
  DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE 
                           20                           140 
[1] "DEL PEAK  4(3P13) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  4(3P13) MUTATED DEL PEAK  4(3P13) WILD-TYPE 
                         27                         133 
  DEL PEAK  4(3P13) MUTATED DEL PEAK  4(3P13) WILD-TYPE 
                         27                         133 
[1] "DEL PEAK  5(3Q29) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  5(3Q29) MUTATED DEL PEAK  5(3Q29) WILD-TYPE 
                         10                         150 
  DEL PEAK  5(3Q29) MUTATED DEL PEAK  5(3Q29) WILD-TYPE 
                         10                         150 
[1] "DEL PEAK  6(4Q28.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  6(4Q28.2) MUTATED DEL PEAK  6(4Q28.2) WILD-TYPE 
                           14                           146 
  DEL PEAK  6(4Q28.2) MUTATED DEL PEAK  6(4Q28.2) WILD-TYPE 
                           14                           146 
[1] "DEL PEAK  7(5Q11.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE 
                           24                           136 
  DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE 
                           24                           136 
[1] "DEL PEAK  8(5Q21.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  8(5Q21.1) MUTATED DEL PEAK  8(5Q21.1) WILD-TYPE 
                           28                           132 
  DEL PEAK  8(5Q21.1) MUTATED DEL PEAK  8(5Q21.1) WILD-TYPE 
                           28                           132 
[1] "DEL PEAK  9(6Q15) MUTATION ANALYSIS"
[1] 3
  DEL PEAK  9(6Q15) MUTATED DEL PEAK  9(6Q15) WILD-TYPE 
                         51                         109 
  DEL PEAK  9(6Q15) MUTATED DEL PEAK  9(6Q15) WILD-TYPE 
                         51                         109 
[1] "DEL PEAK 10(7Q36.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 10(7Q36.1) MUTATED DEL PEAK 10(7Q36.1) WILD-TYPE 
                            7                           153 
  DEL PEAK 10(7Q36.1) MUTATED DEL PEAK 10(7Q36.1) WILD-TYPE 
                            7                           153 
[1] "DEL PEAK 11(8P21.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 11(8P21.3) MUTATED DEL PEAK 11(8P21.3) WILD-TYPE 
                           97                            63 
  DEL PEAK 11(8P21.3) MUTATED DEL PEAK 11(8P21.3) WILD-TYPE 
                           97                            63 
[1] "DEL PEAK 12(8P11.21) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 12(8P11.21) MUTATED DEL PEAK 12(8P11.21) WILD-TYPE 
                            55                            105 
  DEL PEAK 12(8P11.21) MUTATED DEL PEAK 12(8P11.21) WILD-TYPE 
                            55                            105 
[1] "DEL PEAK 13(9P22.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 13(9P22.3) MUTATED DEL PEAK 13(9P22.3) WILD-TYPE 
                           14                           146 
  DEL PEAK 13(9P22.3) MUTATED DEL PEAK 13(9P22.3) WILD-TYPE 
                           14                           146 
[1] "DEL PEAK 14(10Q23.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE 
                             59                             101 
  DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE 
                             59                             101 
[1] "DEL PEAK 15(11Q23.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 15(11Q23.2) MUTATED DEL PEAK 15(11Q23.2) WILD-TYPE 
                            17                            143 
  DEL PEAK 15(11Q23.2) MUTATED DEL PEAK 15(11Q23.2) WILD-TYPE 
                            17                            143 
[1] "DEL PEAK 16(12P13.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 16(12P13.2) MUTATED DEL PEAK 16(12P13.2) WILD-TYPE 
                            34                            126 
  DEL PEAK 16(12P13.2) MUTATED DEL PEAK 16(12P13.2) WILD-TYPE 
                            34                            126 
[1] "DEL PEAK 17(13Q14.13) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 17(13Q14.13) MUTATED DEL PEAK 17(13Q14.13) WILD-TYPE 
                             74                              86 
  DEL PEAK 17(13Q14.13) MUTATED DEL PEAK 17(13Q14.13) WILD-TYPE 
                             74                              86 
[1] "DEL PEAK 18(16Q22.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 18(16Q22.3) MUTATED DEL PEAK 18(16Q22.3) WILD-TYPE 
                            53                            107 
  DEL PEAK 18(16Q22.3) MUTATED DEL PEAK 18(16Q22.3) WILD-TYPE 
                            53                            107 
[1] "DEL PEAK 19(16Q24.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 19(16Q24.1) MUTATED DEL PEAK 19(16Q24.1) WILD-TYPE 
                            68                             92 
  DEL PEAK 19(16Q24.1) MUTATED DEL PEAK 19(16Q24.1) WILD-TYPE 
                            68                             92 
[1] "DEL PEAK 20(17P13.1) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 20(17P13.1) MUTATED DEL PEAK 20(17P13.1) WILD-TYPE 
                            42                            118 
  DEL PEAK 20(17P13.1) MUTATED DEL PEAK 20(17P13.1) WILD-TYPE 
                            42                            118 
[1] "DEL PEAK 21(17Q21.31) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 21(17Q21.31) MUTATED DEL PEAK 21(17Q21.31) WILD-TYPE 
                             30                             130 
  DEL PEAK 21(17Q21.31) MUTATED DEL PEAK 21(17Q21.31) WILD-TYPE 
                             30                             130 
[1] "DEL PEAK 22(18Q23) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 22(18Q23) MUTATED DEL PEAK 22(18Q23) WILD-TYPE 
                          49                          111 
  DEL PEAK 22(18Q23) MUTATED DEL PEAK 22(18Q23) WILD-TYPE 
                          49                          111 
[1] "DEL PEAK 23(19Q13.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 23(19Q13.2) MUTATED DEL PEAK 23(19Q13.2) WILD-TYPE 
                            13                            147 
  DEL PEAK 23(19Q13.2) MUTATED DEL PEAK 23(19Q13.2) WILD-TYPE 
                            13                            147 
[1] "DEL PEAK 24(21Q22.2) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 24(21Q22.2) MUTATED DEL PEAK 24(21Q22.2) WILD-TYPE 
                            17                            143 
  DEL PEAK 24(21Q22.2) MUTATED DEL PEAK 24(21Q22.2) WILD-TYPE 
                            17                            143 
[1] "DEL PEAK 25(21Q22.3) MUTATION ANALYSIS"
[1] 3
  DEL PEAK 25(21Q22.3) MUTATED DEL PEAK 25(21Q22.3) WILD-TYPE 
                            52                            108 
  DEL PEAK 25(21Q22.3) MUTATED DEL PEAK 25(21Q22.3) WILD-TYPE 
                            52                            108 
[1] "terrence_modification_tag"
[1] TRUE
[1] "data2feature, selection="
 [1] "YEARSTOBIRTH"                     "VITALSTATUS"                     
 [3] "DAYSTODEATH"                      "DAYSTOLASTFOLLOWUP"              
 [5] "PRIMARYSITEOFDESEASE"             "NEOPLASM.DISEASESTAGE"           
 [7] "PATHOLOGY.T.STAGE"                "PATHOLOGY.N.STAGE"               
 [9] "PATHOLOGY.M.STAGE"                "DCCUPLOADDATE"                   
[11] "GENDER"                           "DATEOFINITIALPATHOLOGICDIAGNOSIS"
[13] "RADIATIONTHERAPY"                 "HISTOLOGICALTYPE"                
[15] "COMPLETENESS.OF.RESECTION"        "NUMBER.OF.LYMPH.NODES"           
[17] "BATCHNUMBER"                     

Input Data has 17 rows and 160 columns.

[1] "Batch" "17"   
[1] "Last Follow UP"
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
          91          212          671           31          395          424 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
          60          731           31          395         1065          942 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
          31           62           28         1339          365           31 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
         700           31          458          731           62          395 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
         485          820          303          974         1004           91 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
         881          378          605          594          396          536 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 
         532          729          244          530          229          447 
TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 
         356          182          907         1096          737          788 
TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 
         782          724         1061          783          849         1195 
TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 
        1153          842         1403          834          790          567 
TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 
         397         1272          724          910          519          821 
TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 
        1490         1860          295          289          285          233 
TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 
         175          170          191            9          169           64 
TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7789 
         131          167          258           79           52           70 
TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 
         217          526           43          284          187         1946 
TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 
         821           NA          162           32          923         2328 
TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 
        1925         1669         1649         1338          554         1144 
TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 
        1215          847         1000         1008          822          993 
TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 
         841          804          101          875          851          806 
TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 
         846          505          518          664          390          356 
TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 
        1442         1014         1109          674          457          486 
TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 
         451          324          512           31           61           NA 
TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 
         162           89           61           31           30           31 
TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 
          60           51           72           30           63           53 
TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7750 
          45           51           57           62           61           34 
TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-7821 TCGA-HC-8265 TCGA-HC-A4ZV TCGA-HI-7168 
          98           45           56           62           23         2391 
TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
        1949         1899           NA           98 
Variable 1:'AGE':	nDistinctValues=28,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 2:'VITALSTATUS':	nDistinctValues=2,	numeric=TRUE,	binary=TRUE,	exclude=TRUE.
Variable 3:'DAYSTODEATH':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 4:'DAYSTOLASTFOLLOWUP':	nDistinctValues=133,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 5:'PRIMARY.SITE.OF.DISEASE':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 6:'NEOPLASM.DISEASESTAGE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 7:'PATHOLOGY.T.STAGE':	nDistinctValues=6,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'PATHOLOGY.N.STAGE':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'PATHOLOGY.M.STAGE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 10:'DCCUPLOADDAY':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 11:'GENDER':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 12:'DAYOFINITIALPATHOLOGICDIAGNOSIS':	nDistinctValues=8,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 13:'RADIATION.THERAPY':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 14:'HISTOLOGICAL.TYPE':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 15:'COMPLETENESS.OF.RESECTION':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 16:'NUMBER.OF.LYMPH.NODES':	nDistinctValues=9,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 17:'BATCH.NUMBER':	nDistinctValues=9,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
[1] "rownames(nsurv.mat)"
[1] "AGE"                       "PATHOLOGY.T.STAGE"        
[3] "PATHOLOGY.N.STAGE"         "COMPLETENESS.OF.RESECTION"
[5] "NUMBER.OF.LYMPH.NODES"    
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T" "2"          
[1] "PATHOLOGY.N" "3"          
Output Data has 160 columns, 1 survival variables, and 5 non-survival variables.
AGE, nv=28, binary=FALSE, numeric=TRUE
PATHOLOGY.T.STAGE, nv=3, binary=FALSE, numeric=TRUE
[1] "grepl('PATHOLOGY.T',vnm)"
vv
T2 T3 T4 
69 85  5 
[1] "table(vv)"
vv
T2 T3 T4 
69 85  5 
$ClinVariableName
[1] "PATHOLOGY.T.STAGE"

$Table
vv
T2 T3 T4 
69 85  5 

$nClasses
[1] 3

$ClinVariableType
[1] "multiclass(3)"


T2 T3 T4 
69 85  5 
PATHOLOGY.N.STAGE, nv=2, binary=FALSE, numeric=TRUE
COMPLETENESS.OF.RESECTION, nv=3, binary=FALSE, numeric=FALSE
NUMBER.OF.LYMPH.NODES, nv=9, binary=FALSE, numeric=TRUE

Clustering(1) Variable = AMP PEAK  1(1Q21.3) MUTATION ANALYSIS
D1V1, survival
                               sevent
clus2                             0   1
  AMP PEAK  1(1Q21.3) MUTATED    13   0
  AMP PEAK  1(1Q21.3) WILD-TYPE 146   1
  AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE 
                           13                           147 
  AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE 
                            0                             1 
$`AMP PEAK  1(1Q21.3) MUTATED`
TCGA-CH-5766 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5525 TCGA-EJ-7784 TCGA-EJ-7788 
        1.02        39.29        37.91        25.97         5.49         1.71 
TCGA-G9-6362 TCGA-G9-6499 TCGA-G9-7525 TCGA-HC-7080 TCGA-HC-7213 TCGA-HC-8265 
       27.02        36.46        16.83         2.01         1.97         2.04 
TCGA-HI-7168 
       65.92 

$`AMP PEAK  1(1Q21.3) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 
       23.01        15.06        24.03         2.04        12.99        15.95 
TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 
       26.96         9.96        32.02        33.01         2.99        28.96 
TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 
       12.43        19.89        19.53        13.02        17.62        17.49 
TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 
       23.97         8.02        17.42         7.53        14.70        11.70 
TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 
        5.98        29.82        36.03        24.23        25.91        25.71 
TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5521 TCGA-EJ-5522 
       23.80        34.88        25.74        27.91        27.68        46.13 
TCGA-EJ-5524 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 
       27.42        18.64        13.05        41.82        23.80        29.92 
TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 
       17.06        26.99        48.99        61.15         9.70         9.50 
TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 
        9.37         7.66         5.75         5.59         6.28         0.30 
TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7789 
        5.56         2.10         4.31         8.48         2.60         2.30 
TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 
        7.13        17.29         1.41         9.34         6.15        63.98 
TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 
       26.99        66.12         5.33         1.05        30.35        65.92 
TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 
       63.29        54.87        54.21        43.99        18.21        37.61 
TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6363 TCGA-G9-6364 
       39.95        27.85        32.88        33.14        32.65        27.65 
TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 
       26.43         3.32        28.77        27.98        26.50        27.81 
TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 
       16.60        17.03        21.83        12.82        11.70        47.41 
TCGA-G9-6496 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 
       33.34        22.16        15.02        15.98        14.83        10.65 
TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7209 
        1.02         2.01        65.98         5.33         2.93         1.02 
TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 
        0.99         1.02         1.68         2.37         0.99         2.07 
TCGA-HC-7740 TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7749 
        1.74         1.48         1.68         1.87         2.04         2.01 
TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-7821 TCGA-HC-A4ZV TCGA-HI-7169 
        1.12         3.22         1.48         1.84         0.76        64.08 
TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       62.43        66.02         3.22 

  AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE 
                         1.02                          0.30 
  AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE 
                        65.92                         66.12 
  AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE 
                        16.83                         15.02 
[1] "1.0 - 65.9 (16.8)" "0.3 - 66.1 (15.0)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
  "AMP PEAK  1(1Q21.3) MUTATED" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"AMP PEAK  1(1Q21.3) WILD-TYPE"   "AMP PEAK  1(1Q21.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK  1(1Q21.3) WILD-TYPE" "AMP PEAK  1(1Q21.3) WILD-TYPE" 
[1] "hr=" "1"  
D1V2, continuous
                               vv
clus                            T2 T3 T4
  AMP PEAK  1(1Q21.3) MUTATED    4  8  1
  AMP PEAK  1(1Q21.3) WILD-TYPE 65 77  4
D1V3, multiclass
    clus
vv   AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE
  T2                           4                            65
  T3                           8                            77
  T4                           1                             4
D1V4, binary
                               cls
clus                              0   1
  AMP PEAK  1(1Q21.3) MUTATED    11   2
  AMP PEAK  1(1Q21.3) WILD-TYPE 115  13
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  1(1Q21.3) MUTATED     11    2
  AMP PEAK  1(1Q21.3) WILD-TYPE  115   13
   clus
vv  AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE
  0                          11                           115
  1                           2                            13
                               vv
clus                             R0  R1  RX
  AMP PEAK  1(1Q21.3) MUTATED    10   3   0
  AMP PEAK  1(1Q21.3) WILD-TYPE 109  28   3
D1V5, multiclass
    clus
vv   AMP PEAK  1(1Q21.3) MUTATED AMP PEAK  1(1Q21.3) WILD-TYPE
  R0                          10                           109
  R1                           3                            28
  RX                           0                             3
D1V6, continuous

Clustering(2) Variable = AMP PEAK  2(3Q26.2) MUTATION ANALYSIS
D2V1, survival
                               sevent
clus2                             0   1
  AMP PEAK  2(3Q26.2) MUTATED    25   0
  AMP PEAK  2(3Q26.2) WILD-TYPE 134   1
  AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE 
                           25                           135 
  AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE 
                            0                             1 
$`AMP PEAK  2(3Q26.2) MUTATED`
TCGA-CH-5739 TCGA-CH-5751 TCGA-CH-5754 TCGA-CH-5771 TCGA-CH-5788 TCGA-CH-5791 
       22.06        35.01         2.04        12.99        26.96        33.01 
TCGA-EJ-5497 TCGA-EJ-5505 TCGA-EJ-5510 TCGA-EJ-5514 TCGA-EJ-5518 TCGA-EJ-5521 
       13.02        14.70        24.23        23.80        39.29        27.68 
TCGA-EJ-5527 TCGA-EJ-5531 TCGA-EJ-5542 TCGA-EJ-7330 TCGA-EJ-7782 TCGA-EJ-7792 
       13.05        23.80        17.06         6.28         2.10        17.29 
TCGA-G9-6338 TCGA-G9-6363 TCGA-G9-6366 TCGA-G9-6499 TCGA-G9-7521 TCGA-HC-7211 
       54.21        32.65         3.32        36.46        15.98         0.99 
TCGA-HC-A4ZV 
        0.76 

$`AMP PEAK  2(3Q26.2) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5744 
        2.99         6.97         1.02        12.99        13.94         1.97 
TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5753 TCGA-CH-5761 
       24.03         1.02        12.99        30.97         1.02         0.92 
TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 
       44.02        12.00         1.02        23.01         1.02        15.06 
TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5772 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5792 
       24.03         2.04        15.95         9.96        32.02         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5498 TCGA-EJ-5499 
       28.96        12.43        19.89        19.53        17.62        17.49 
TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5506 TCGA-EJ-5507 
       23.97         8.02        17.42         7.53        11.70         5.98 
TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5515 TCGA-EJ-5516 
       29.82        36.03        25.91        25.71        34.88        25.74 
TCGA-EJ-5517 TCGA-EJ-5519 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 
       27.91        37.91        46.13        27.42        25.97        18.64 
TCGA-EJ-5530 TCGA-EJ-5532 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 
       41.82        29.92        26.99        48.99        61.15         9.70 
TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7331 
        9.50         9.37         7.66         5.75         5.59         0.30 
TCGA-EJ-7781 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 
        5.56         4.31         5.49         8.48         2.60         1.71 
TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 
        2.30         7.13         1.41         9.34         6.15        63.98 
TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 
       26.99        66.12         5.33         1.05        30.35        65.92 
TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 
       63.29        54.87        43.99        18.21        37.61        39.95 
TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6364 TCGA-G9-6365 
       27.85        32.88        33.14        27.02        27.65        26.43 
TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 
       28.77        27.98        26.50        27.81        16.60        17.03 
TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 
       21.83        12.82        11.70        47.41        33.34        22.16 
TCGA-G9-7519 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 
       15.02        14.83        10.65        16.83         1.02         2.01 
TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7212 
       65.98         5.33         2.93         2.01         1.02         1.02 
TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 
        1.97         1.68         2.37         0.99         2.07         1.74 
TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7750 
        1.48         1.68         1.87         2.04         2.01         1.12 
TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-7821 TCGA-HC-8265 TCGA-HI-7168 TCGA-HI-7169 
        3.22         1.48         1.84         2.04        65.92        64.08 
TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       62.43        66.02         3.22 

  AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE 
                         0.76                          0.30 
  AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE 
                        54.21                         66.12 
  AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE 
                        17.29                         13.94 
[1] "0.8 - 54.2 (17.3)" "0.3 - 66.1 (13.9)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK  2(3Q26.2) WILD-TYPE"   "AMP PEAK  2(3Q26.2) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
  "AMP PEAK  2(3Q26.2) MUTATED" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK  2(3Q26.2) WILD-TYPE" "AMP PEAK  2(3Q26.2) WILD-TYPE" 
[1] "hr=" "1"  
D2V2, continuous
                               vv
clus                            T2 T3 T4
  AMP PEAK  2(3Q26.2) MUTATED    8 14  3
  AMP PEAK  2(3Q26.2) WILD-TYPE 61 71  2
D2V3, multiclass
    clus
vv   AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE
  T2                           8                            61
  T3                          14                            71
  T4                           3                             2
D2V4, binary
                               cls
clus                              0   1
  AMP PEAK  2(3Q26.2) MUTATED    20   4
  AMP PEAK  2(3Q26.2) WILD-TYPE 106  11
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  2(3Q26.2) MUTATED     20    4
  AMP PEAK  2(3Q26.2) WILD-TYPE  106   11
   clus
vv  AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE
  0                          20                           106
  1                           4                            11
                               vv
clus                             R0  R1  RX
  AMP PEAK  2(3Q26.2) MUTATED    19   6   0
  AMP PEAK  2(3Q26.2) WILD-TYPE 100  25   3
D2V5, multiclass
    clus
vv   AMP PEAK  2(3Q26.2) MUTATED AMP PEAK  2(3Q26.2) WILD-TYPE
  R0                          19                           100
  R1                           6                            25
  RX                           0                             3
D2V6, continuous

Clustering(3) Variable = AMP PEAK  3(7P15.3) MUTATION ANALYSIS
D3V1, survival
                               sevent
clus2                             0   1
  AMP PEAK  3(7P15.3) MUTATED    31   1
  AMP PEAK  3(7P15.3) WILD-TYPE 128   0
  AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE 
                           32                           128 
  AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE 
                            1                             0 
$`AMP PEAK  3(7P15.3) MUTATED`
TCGA-CH-5751 TCGA-CH-5754 TCGA-CH-5762 TCGA-CH-5768 TCGA-CH-5771 TCGA-CH-5772 
       35.01         2.04        44.02        24.03        12.99        15.95 
TCGA-CH-5788 TCGA-CH-5791 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5509 TCGA-EJ-5542 
       26.96        33.01        12.43        19.89        36.03        17.06 
TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7330 TCGA-EJ-7784 TCGA-EJ-7789 TCGA-G9-6338 
       61.15         9.70         6.28         5.49         2.30        54.21 
TCGA-G9-6366 TCGA-G9-6371 TCGA-G9-6377 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7523 
        3.32        27.81        17.03        33.34        36.46        10.65 
TCGA-HC-7078 TCGA-HC-7213 TCGA-HC-7742 TCGA-HC-8265 TCGA-HC-A4ZV TCGA-HI-7168 
        5.33         1.97         1.48         2.04         0.76        65.92 
TCGA-HI-7171 TCGA-J4-8198 
       66.02         3.22 

$`AMP PEAK  3(7P15.3) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5753 
        1.97        24.03         1.02        12.99        30.97         1.02 
TCGA-CH-5761 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 
        0.92        12.00         1.02        23.01         1.02        15.06 
TCGA-CH-5769 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5496 
        2.04         9.96        32.02         2.99        28.96        19.53 
TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 
       13.02        17.62        17.49        23.97         8.02        17.42 
TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5510 
        7.53        14.70        11.70         5.98        29.82        24.23 
TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 
       25.91        25.71        23.80        34.88        25.74        27.91 
TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 
       39.29        37.91        27.68        46.13        27.42        25.97 
TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-7115 
       18.64        13.05        41.82        23.80        29.92        26.99 
TCGA-EJ-7123 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 
       48.99         9.50         9.37         7.66         5.75         5.59 
TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7785 TCGA-EJ-7786 
        0.30         5.56         2.10         4.31         8.48         2.60 
TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 
        1.71         7.13        17.29         1.41         9.34         6.15 
TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6329 
       63.98        26.99        66.12         5.33         1.05        30.35 
TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 
       65.92        63.29        54.87        43.99        18.21        37.61 
TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 
       39.95        27.85        32.88        33.14        27.02        32.65 
TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6373 
       27.65        26.43        28.77        27.98        26.50        16.60 
TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-7510 TCGA-G9-7519 
       21.83        12.82        11.70        47.41        22.16        15.02 
TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 
       15.98        14.83        16.83         1.02         2.01        65.98 
TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7230 
        2.93         2.01         1.02         0.99         1.02         1.68 
TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 
        2.37         0.99         2.07         1.74         1.68         1.87 
TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-7821 
        2.04         2.01         1.12         3.22         1.48         1.84 
TCGA-HI-7169 TCGA-HI-7170 
       64.08        62.43 

  AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE 
                         0.76                          0.30 
  AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE 
                        66.02                         66.12 
  AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE 
                       16.490                        14.925 
[1] "0.8 - 66.0 (16.5)" "0.3 - 66.1 (14.9)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5772                    TCGA-CH-5788 
  "AMP PEAK  3(7P15.3) MUTATED"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
  "AMP PEAK  3(7P15.3) MUTATED"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "AMP PEAK  3(7P15.3) MUTATED"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5772                    TCGA-CH-5788 
  "AMP PEAK  3(7P15.3) MUTATED"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
  "AMP PEAK  3(7P15.3) MUTATED"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "AMP PEAK  3(7P15.3) MUTATED"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5772                    TCGA-CH-5788 
  "AMP PEAK  3(7P15.3) MUTATED"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
  "AMP PEAK  3(7P15.3) MUTATED" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"AMP PEAK  3(7P15.3) WILD-TYPE"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
  "AMP PEAK  3(7P15.3) MUTATED"   "AMP PEAK  3(7P15.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK  3(7P15.3) WILD-TYPE" "AMP PEAK  3(7P15.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "AMP PEAK  3(7P15.3) MUTATED"   "AMP PEAK  3(7P15.3) MUTATED" 
[1] "hr="     "1.6e+09"
D3V2, continuous
                               vv
clus                            T2 T3 T4
  AMP PEAK  3(7P15.3) MUTATED    7 24  1
  AMP PEAK  3(7P15.3) WILD-TYPE 62 61  4
D3V3, multiclass
    clus
vv   AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE
  T2                           7                            62
  T3                          24                            61
  T4                           1                             4
D3V4, binary
                               cls
clus                              0   1
  AMP PEAK  3(7P15.3) MUTATED    25   4
  AMP PEAK  3(7P15.3) WILD-TYPE 101  11
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  3(7P15.3) MUTATED     25    4
  AMP PEAK  3(7P15.3) WILD-TYPE  101   11
   clus
vv  AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE
  0                          25                           101
  1                           4                            11
                               vv
clus                             R0  R1  RX
  AMP PEAK  3(7P15.3) MUTATED    19  12   0
  AMP PEAK  3(7P15.3) WILD-TYPE 100  19   3
D3V5, multiclass
    clus
vv   AMP PEAK  3(7P15.3) MUTATED AMP PEAK  3(7P15.3) WILD-TYPE
  R0                          19                           100
  R1                          12                            19
  RX                           0                             3
D3V6, continuous

Clustering(4) Variable = AMP PEAK  4(7Q34) MUTATION ANALYSIS
D4V1, survival
                             sevent
clus2                           0   1
  AMP PEAK  4(7Q34) MUTATED    29   0
  AMP PEAK  4(7Q34) WILD-TYPE 130   1
  AMP PEAK  4(7Q34) MUTATED AMP PEAK  4(7Q34) WILD-TYPE 
                         29                         131 
  AMP PEAK  4(7Q34) MUTATED AMP PEAK  4(7Q34) WILD-TYPE 
                          0                           1 
$`AMP PEAK  4(7Q34) MUTATED`
TCGA-CH-5737 TCGA-CH-5751 TCGA-CH-5768 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5788 
        2.99        35.01        24.03        12.99        15.95        26.96 
TCGA-CH-5791 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5509 TCGA-EJ-5525 TCGA-EJ-5542 
       33.01        12.43        19.89        36.03        25.97        17.06 
TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7330 TCGA-EJ-7784 TCGA-EJ-7789 TCGA-G9-6338 
       61.15         9.70         6.28         5.49         2.30        54.21 
TCGA-G9-6371 TCGA-G9-6377 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7523 TCGA-HC-7078 
       27.81        17.03        33.34        36.46        10.65         5.33 
TCGA-HC-7742 TCGA-HC-8265 TCGA-HC-A4ZV TCGA-HI-7168 TCGA-J4-8198 
        1.48         2.04         0.76        65.92         3.22 

$`AMP PEAK  4(7Q34) WILD-TYPE`
TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5744 
        6.97        22.06         1.02        12.99        13.94         1.97 
TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5753 TCGA-CH-5754 
       24.03         1.02        12.99        30.97         1.02         2.04 
TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5766 
        0.92        44.02        12.00         1.02        23.01         1.02 
TCGA-CH-5767 TCGA-CH-5769 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5792 TCGA-CH-5794 
       15.06         2.04         9.96        32.02         2.99        28.96 
TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 
       19.53        13.02        17.62        17.49        23.97         8.02 
TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 
       17.42         7.53        14.70        11.70         5.98        29.82 
TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 
       24.23        25.91        25.71        23.80        34.88        25.74 
TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 
       27.91        39.29        37.91        27.68        46.13        27.42 
TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-7115 
       18.64        13.05        41.82        23.80        29.92        26.99 
TCGA-EJ-7123 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 
       48.99         9.50         9.37         7.66         5.75         5.59 
TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7785 TCGA-EJ-7786 
        0.30         5.56         2.10         4.31         8.48         2.60 
TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 
        1.71         7.13        17.29         1.41         9.34         6.15 
TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6329 
       63.98        26.99        66.12         5.33         1.05        30.35 
TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 
       65.92        63.29        54.87        43.99        18.21        37.61 
TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 
       39.95        27.85        32.88        33.14        27.02        32.65 
TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 
       27.65        26.43         3.32        28.77        27.98        26.50 
TCGA-G9-6373 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-7510 
       16.60        21.83        12.82        11.70        47.41        22.16 
TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 
       15.02        15.98        14.83        16.83         1.02         2.01 
TCGA-HC-7077 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 
       65.98         2.93         2.01         1.02         0.99         1.02 
TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 
        1.97         1.68         2.37         0.99         2.07         1.74 
TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7752 
        1.68         1.87         2.04         2.01         1.12         3.22 
TCGA-HC-7818 TCGA-HC-7821 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 
        1.48         1.84        64.08        62.43        66.02 

  AMP PEAK  4(7Q34) MUTATED AMP PEAK  4(7Q34) WILD-TYPE 
                       0.76                        0.30 
  AMP PEAK  4(7Q34) MUTATED AMP PEAK  4(7Q34) WILD-TYPE 
                      65.92                       66.12 
  AMP PEAK  4(7Q34) MUTATED AMP PEAK  4(7Q34) WILD-TYPE 
                      17.03                       14.83 
[1] "0.8 - 65.9 (17.0)" "0.3 - 66.1 (14.8)"
                 TCGA-CH-5737                  TCGA-CH-5738 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-CH-5772                  TCGA-CH-5788 
  "AMP PEAK  4(7Q34) MUTATED"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-EJ-8469 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-8470                  TCGA-EJ-8472 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-A46B                  TCGA-FC-7708 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7075                  TCGA-HC-7077 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7078                  TCGA-HC-7079 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7080                  TCGA-HC-7209 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7212 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7213                  TCGA-HC-7230 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7231                  TCGA-HC-7736 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7737                  TCGA-HC-7740 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7742                  TCGA-HC-7744 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7748 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7749                  TCGA-HC-7750 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7752                  TCGA-HC-7818 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7821                  TCGA-HC-8265 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-HC-A4ZV                  TCGA-HI-7168 
  "AMP PEAK  4(7Q34) MUTATED"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-CH-5737                  TCGA-CH-5738 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-CH-5772                  TCGA-CH-5788 
  "AMP PEAK  4(7Q34) MUTATED"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-EJ-8469 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-8470                  TCGA-EJ-8472 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-A46B                  TCGA-FC-7708 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7075                  TCGA-HC-7077 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7078                  TCGA-HC-7079 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7080                  TCGA-HC-7209 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7212 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7213                  TCGA-HC-7230 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7231                  TCGA-HC-7736 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7737                  TCGA-HC-7740 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7742                  TCGA-HC-7744 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7748 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7749                  TCGA-HC-7750 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7752                  TCGA-HC-7818 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7821                  TCGA-HC-8265 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-HC-A4ZV                  TCGA-HI-7168 
  "AMP PEAK  4(7Q34) MUTATED"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-CH-5737                  TCGA-CH-5738 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-CH-5772                  TCGA-CH-5788 
  "AMP PEAK  4(7Q34) MUTATED"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-EJ-8469 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-8470                  TCGA-EJ-8472 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-EJ-A46B                  TCGA-FC-7708 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7075                  TCGA-HC-7077 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7078                  TCGA-HC-7079 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7080                  TCGA-HC-7209 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7212 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7213                  TCGA-HC-7230 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7231                  TCGA-HC-7736 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7737                  TCGA-HC-7740 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7742                  TCGA-HC-7744 
  "AMP PEAK  4(7Q34) MUTATED" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7748 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7749                  TCGA-HC-7750 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7752                  TCGA-HC-7818 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HC-7821                  TCGA-HC-8265 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-HC-A4ZV                  TCGA-HI-7168 
  "AMP PEAK  4(7Q34) MUTATED"   "AMP PEAK  4(7Q34) MUTATED" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"AMP PEAK  4(7Q34) WILD-TYPE" "AMP PEAK  4(7Q34) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"AMP PEAK  4(7Q34) WILD-TYPE"   "AMP PEAK  4(7Q34) MUTATED" 
[1] "hr=" "1"  
D4V2, continuous
                             vv
clus                          T2 T3 T4
  AMP PEAK  4(7Q34) MUTATED    9 19  1
  AMP PEAK  4(7Q34) WILD-TYPE 60 66  4
D4V3, multiclass
    clus
vv   AMP PEAK  4(7Q34) MUTATED AMP PEAK  4(7Q34) WILD-TYPE
  T2                         9                          60
  T3                        19                          66
  T4                         1                           4
D4V4, binary
                             cls
clus                            0   1
  AMP PEAK  4(7Q34) MUTATED    24   3
  AMP PEAK  4(7Q34) WILD-TYPE 102  12
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK  4(7Q34) MUTATED     24    3
  AMP PEAK  4(7Q34) WILD-TYPE  102   12
   clus
vv  AMP PEAK  4(7Q34) MUTATED AMP PEAK  4(7Q34) WILD-TYPE
  0                        24                         102
  1                         3                          12
                             vv
clus                           R0  R1  RX
  AMP PEAK  4(7Q34) MUTATED    19   9   0
  AMP PEAK  4(7Q34) WILD-TYPE 100  22   3
D4V5, multiclass
    clus
vv   AMP PEAK  4(7Q34) MUTATED AMP PEAK  4(7Q34) WILD-TYPE
  R0                        19                         100
  R1                         9                          22
  RX                         0                           3
D4V6, continuous

Clustering(5) Variable = AMP PEAK  5(8P11.22) MUTATION ANALYSIS
D5V1, survival
                                sevent
clus2                              0   1
  AMP PEAK  5(8P11.22) MUTATED    16   0
  AMP PEAK  5(8P11.22) WILD-TYPE 143   1
  AMP PEAK  5(8P11.22) MUTATED AMP PEAK  5(8P11.22) WILD-TYPE 
                            16                            144 
  AMP PEAK  5(8P11.22) MUTATED AMP PEAK  5(8P11.22) WILD-TYPE 
                             0                              1 
$`AMP PEAK  5(8P11.22) MUTATED`
TCGA-CH-5751 TCGA-CH-5767 TCGA-CH-5788 TCGA-EJ-5504 TCGA-EJ-5509 TCGA-EJ-5511 
       35.01        15.06        26.96         7.53        36.03        25.91 
TCGA-EJ-5514 TCGA-EJ-5526 TCGA-EJ-7125 TCGA-EJ-7781 TCGA-EJ-7784 TCGA-G9-6366 
       23.80        18.64        61.15         5.56         5.49         3.32 
TCGA-G9-6373 TCGA-G9-6499 TCGA-HC-7213 TCGA-HC-A4ZV 
       16.60        36.46         1.97         0.76 

$`AMP PEAK  5(8P11.22) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5753 
        1.97        24.03         1.02        12.99        30.97         1.02 
TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 
        2.04         0.92        44.02        12.00         1.02        23.01 
TCGA-CH-5766 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5789 
        1.02        24.03         2.04        12.99        15.95         9.96 
TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 
       32.02        33.01         2.99        28.96        12.43        19.89 
TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 
       19.53        13.02        17.62        17.49        23.97         8.02 
TCGA-EJ-5503 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5510 
       17.42        14.70        11.70         5.98        29.82        24.23 
TCGA-EJ-5512 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 
       25.71        34.88        25.74        27.91        39.29        37.91 
TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5527 TCGA-EJ-5530 
       27.68        46.13        27.42        25.97        13.05        41.82 
TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7314 
       23.80        29.92        17.06        26.99        48.99         9.70 
TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 
        9.50         9.37         7.66         5.75         5.59         6.28 
TCGA-EJ-7331 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 
        0.30         2.10         4.31         8.48         2.60         1.71 
TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 
        2.30         7.13        17.29         1.41         9.34         6.15 
TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6329 
       63.98        26.99        66.12         5.33         1.05        30.35 
TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 
       65.92        63.29        54.87        54.21        43.99        18.21 
TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 
       37.61        39.95        27.85        32.88        33.14        27.02 
TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 
       32.65        27.65        26.43        28.77        27.98        26.50 
TCGA-G9-6371 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 
       27.81        17.03        21.83        12.82        11.70        47.41 
TCGA-G9-6496 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 
       33.34        22.16        15.02        15.98        14.83        10.65 
TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 
       16.83         1.02         2.01        65.98         5.33         2.93 
TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7230 TCGA-HC-7231 
        2.01         1.02         0.99         1.02         1.68         2.37 
TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 
        0.99         2.07         1.74         1.48         1.68         1.87 
TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-7821 
        2.04         2.01         1.12         3.22         1.48         1.84 
TCGA-HC-8265 TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
        2.04        65.92        64.08        62.43        66.02         3.22 

  AMP PEAK  5(8P11.22) MUTATED AMP PEAK  5(8P11.22) WILD-TYPE 
                          0.76                           0.30 
  AMP PEAK  5(8P11.22) MUTATED AMP PEAK  5(8P11.22) WILD-TYPE 
                         61.15                          66.12 
  AMP PEAK  5(8P11.22) MUTATED AMP PEAK  5(8P11.22) WILD-TYPE 
                        17.620                         14.765 
[1] "0.8 - 61.1 (17.6)" "0.3 - 66.1 (14.8)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK  5(8P11.22) WILD-TYPE"   "AMP PEAK  5(8P11.22) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "AMP PEAK  5(8P11.22) MUTATED" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK  5(8P11.22) WILD-TYPE" "AMP PEAK  5(8P11.22) WILD-TYPE" 
[1] "hr=" "1"  
D5V2, continuous
                                vv
clus                             T2 T3 T4
  AMP PEAK  5(8P11.22) MUTATED    6  9  1
  AMP PEAK  5(8P11.22) WILD-TYPE 63 76  4
D5V3, multiclass
    clus
vv   AMP PEAK  5(8P11.22) MUTATED AMP PEAK  5(8P11.22) WILD-TYPE
  T2                            6                             63
  T3                            9                             76
  T4                            1                              4
D5V4, binary
                                cls
clus                               0   1
  AMP PEAK  5(8P11.22) MUTATED    10   4
  AMP PEAK  5(8P11.22) WILD-TYPE 116  11
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  5(8P11.22) MUTATED     10    4
  AMP PEAK  5(8P11.22) WILD-TYPE  116   11
   clus
vv  AMP PEAK  5(8P11.22) MUTATED AMP PEAK  5(8P11.22) WILD-TYPE
  0                           10                            116
  1                            4                             11
                                vv
clus                              R0  R1  RX
  AMP PEAK  5(8P11.22) MUTATED    14   2   0
  AMP PEAK  5(8P11.22) WILD-TYPE 105  29   3
D5V5, multiclass
    clus
vv   AMP PEAK  5(8P11.22) MUTATED AMP PEAK  5(8P11.22) WILD-TYPE
  R0                           14                            105
  R1                            2                             29
  RX                            0                              3
D5V6, continuous

Clustering(6) Variable = AMP PEAK  6(8Q24.21) MUTATION ANALYSIS
D6V1, survival
                                sevent
clus2                              0   1
  AMP PEAK  6(8Q24.21) MUTATED    41   1
  AMP PEAK  6(8Q24.21) WILD-TYPE 118   0
  AMP PEAK  6(8Q24.21) MUTATED AMP PEAK  6(8Q24.21) WILD-TYPE 
                            42                            118 
  AMP PEAK  6(8Q24.21) MUTATED AMP PEAK  6(8Q24.21) WILD-TYPE 
                             1                              0 
$`AMP PEAK  6(8Q24.21) MUTATED`
TCGA-CH-5739 TCGA-CH-5751 TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 
       22.06        35.01         1.02         2.04         0.92        44.02 
TCGA-CH-5767 TCGA-CH-5771 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5507 TCGA-EJ-5508 
       15.06        12.99         7.53        14.70         5.98        29.82 
TCGA-EJ-5509 TCGA-EJ-5511 TCGA-EJ-5514 TCGA-EJ-5517 TCGA-EJ-5521 TCGA-EJ-5525 
       36.03        25.91        23.80        27.91        27.68        25.97 
TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5532 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7781 
       18.64        13.05        29.92        48.99        61.15         5.56 
TCGA-EJ-7784 TCGA-EJ-7789 TCGA-EJ-8469 TCGA-G9-6366 TCGA-G9-6373 TCGA-G9-6377 
        5.49         2.30        63.98         3.32        16.60        17.03 
TCGA-G9-6494 TCGA-G9-6499 TCGA-G9-7510 TCGA-G9-7521 TCGA-HC-7078 TCGA-HC-7212 
       47.41        36.46        22.16        15.98         5.33         1.02 
TCGA-HC-7213 TCGA-HC-7742 TCGA-HC-8265 TCGA-HC-A4ZV TCGA-HI-7168 TCGA-HI-7171 
        1.97         1.48         2.04         0.76        65.92        66.02 

$`AMP PEAK  6(8Q24.21) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5744 
        2.99         6.97         1.02        12.99        13.94         1.97 
TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5763 TCGA-CH-5764 
       24.03         1.02        12.99        30.97        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5772 TCGA-CH-5788 
       23.01         1.02        24.03         2.04        15.95        26.96 
TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 
        9.96        32.02        33.01         2.99        28.96        12.43 
TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 
       19.89        19.53        13.02        17.62        17.49        23.97 
TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5506 TCGA-EJ-5510 TCGA-EJ-5512 TCGA-EJ-5515 
        8.02        17.42        11.70        24.23        25.71        34.88 
TCGA-EJ-5516 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5530 
       25.74        39.29        37.91        46.13        27.42        41.82 
TCGA-EJ-5531 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 
       23.80        17.06        26.99         9.70         9.50         9.37 
TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7782 
        7.66         5.75         5.59         6.28         0.30         2.10 
TCGA-EJ-7783 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 
        4.31         8.48         2.60         1.71         7.13        17.29 
TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B 
        1.41         9.34         6.15        26.99        66.12         5.33 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 
        1.05        30.35        65.92        63.29        54.87        54.21 
TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 
       43.99        18.21        37.61        39.95        27.85        32.88 
TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6367 
       33.14        27.02        32.65        27.65        26.43        28.77 
TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 
       27.98        26.50        27.81        21.83        12.82        11.70 
TCGA-G9-6496 TCGA-G9-7519 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 
       33.34        15.02        14.83        10.65        16.83         1.02 
TCGA-HC-7075 TCGA-HC-7077 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7211 
        2.01        65.98         2.93         2.01         1.02         0.99 
TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 
        1.68         2.37         0.99         2.07         1.74         1.68 
TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 
        1.87         2.04         2.01         1.12         3.22         1.48 
TCGA-HC-7821 TCGA-HI-7169 TCGA-HI-7170 TCGA-J4-8198 
        1.84        64.08        62.43         3.22 

  AMP PEAK  6(8Q24.21) MUTATED AMP PEAK  6(8Q24.21) WILD-TYPE 
                          0.76                           0.30 
  AMP PEAK  6(8Q24.21) MUTATED AMP PEAK  6(8Q24.21) WILD-TYPE 
                         66.02                          66.12 
  AMP PEAK  6(8Q24.21) MUTATED AMP PEAK  6(8Q24.21) WILD-TYPE 
                        16.815                         13.480 
[1] "0.8 - 66.0 (16.8)" "0.3 - 66.1 (13.5)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-HC-7213                     TCGA-HC-7230 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-HC-7213                     TCGA-HC-7230 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-HC-7213                     TCGA-HC-7230 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"AMP PEAK  6(8Q24.21) WILD-TYPE"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "AMP PEAK  6(8Q24.21) MUTATED"   "AMP PEAK  6(8Q24.21) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK  6(8Q24.21) WILD-TYPE" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "AMP PEAK  6(8Q24.21) MUTATED" "AMP PEAK  6(8Q24.21) WILD-TYPE" 
[1] "hr="     "1.6e+09"
D6V2, continuous
                                vv
clus                             T2 T3 T4
  AMP PEAK  6(8Q24.21) MUTATED   13 27  2
  AMP PEAK  6(8Q24.21) WILD-TYPE 56 58  3
D6V3, multiclass
    clus
vv   AMP PEAK  6(8Q24.21) MUTATED AMP PEAK  6(8Q24.21) WILD-TYPE
  T2                           13                             56
  T3                           27                             58
  T4                            2                              3
D6V4, binary
                                cls
clus                              0  1
  AMP PEAK  6(8Q24.21) MUTATED   33  7
  AMP PEAK  6(8Q24.21) WILD-TYPE 93  8
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  6(8Q24.21) MUTATED     33    7
  AMP PEAK  6(8Q24.21) WILD-TYPE   93    8
   clus
vv  AMP PEAK  6(8Q24.21) MUTATED AMP PEAK  6(8Q24.21) WILD-TYPE
  0                           33                             93
  1                            7                              8
                                vv
clus                             R0 R1 RX
  AMP PEAK  6(8Q24.21) MUTATED   32  8  1
  AMP PEAK  6(8Q24.21) WILD-TYPE 87 23  2
D6V5, multiclass
    clus
vv   AMP PEAK  6(8Q24.21) MUTATED AMP PEAK  6(8Q24.21) WILD-TYPE
  R0                           32                             87
  R1                            8                             23
  RX                            1                              2
D6V6, continuous

Clustering(7) Variable = AMP PEAK  7(9Q34.3) MUTATION ANALYSIS
D7V1, survival
                               sevent
clus2                             0   1
  AMP PEAK  7(9Q34.3) MUTATED    15   0
  AMP PEAK  7(9Q34.3) WILD-TYPE 144   1
  AMP PEAK  7(9Q34.3) MUTATED AMP PEAK  7(9Q34.3) WILD-TYPE 
                           15                           145 
  AMP PEAK  7(9Q34.3) MUTATED AMP PEAK  7(9Q34.3) WILD-TYPE 
                            0                             1 
$`AMP PEAK  7(9Q34.3) MUTATED`
TCGA-CH-5751 TCGA-CH-5753 TCGA-CH-5771 TCGA-CH-5791 TCGA-EJ-5495 TCGA-EJ-5496 
       35.01         1.02        12.99        33.01        19.89        19.53 
TCGA-EJ-5526 TCGA-EJ-7789 TCGA-EJ-8472 TCGA-G9-6356 TCGA-G9-6373 TCGA-G9-7521 
       18.64         2.30        66.12        32.88        16.60        15.98 
TCGA-HC-7821 TCGA-HC-A4ZV TCGA-HI-7168 
        1.84         0.76        65.92 

$`AMP PEAK  7(9Q34.3) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5754 
        1.97        24.03         1.02        12.99        30.97         2.04 
TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5766 
        0.92        44.02        12.00         1.02        23.01         1.02 
TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 
       15.06        24.03         2.04        15.95        26.96         9.96 
TCGA-CH-5790 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5497 TCGA-EJ-5498 
       32.02         2.99        28.96        12.43        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 
       17.49        23.97         8.02        17.42         7.53        14.70 
TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 
       11.70         5.98        29.82        36.03        24.23        25.91 
TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 
       25.71        23.80        34.88        25.74        27.91        39.29 
TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5527 
       37.91        27.68        46.13        27.42        25.97        13.05 
TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 
       41.82        23.80        29.92        17.06        26.99        48.99 
TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 
       61.15         9.70         9.50         9.37         7.66         5.75 
TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 
        5.59         6.28         0.30         5.56         2.10         4.31 
TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 
        5.49         8.48         2.60         1.71         7.13        17.29 
TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-A46B 
        1.41         9.34         6.15        63.98        26.99         5.33 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 
        1.05        30.35        65.92        63.29        54.87        54.21 
TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6361 
       43.99        18.21        37.61        39.95        27.85        33.14 
TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 
       27.02        32.65        27.65        26.43         3.32        28.77 
TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 
       27.98        26.50        27.81        17.03        21.83        12.82 
TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 TCGA-G9-7519 
       11.70        47.41        33.34        36.46        22.16        15.02 
TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 
       14.83        10.65        16.83         1.02         2.01        65.98 
TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 
        5.33         2.93         2.01         1.02         0.99         1.02 
TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 
        1.97         1.68         2.37         0.99         2.07         1.74 
TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7750 
        1.48         1.68         1.87         2.04         2.01         1.12 
TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-8265 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 
        3.22         1.48         2.04        64.08        62.43        66.02 
TCGA-J4-8198 
        3.22 

  AMP PEAK  7(9Q34.3) MUTATED AMP PEAK  7(9Q34.3) WILD-TYPE 
                         0.76                          0.30 
  AMP PEAK  7(9Q34.3) MUTATED AMP PEAK  7(9Q34.3) WILD-TYPE 
                        66.12                         66.02 
  AMP PEAK  7(9Q34.3) MUTATED AMP PEAK  7(9Q34.3) WILD-TYPE 
                        18.64                         14.70 
[1] "0.8 - 66.1 (18.6)" "0.3 - 66.0 (14.7)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "AMP PEAK  7(9Q34.3) MUTATED" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
  "AMP PEAK  7(9Q34.3) MUTATED" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK  7(9Q34.3) WILD-TYPE"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "AMP PEAK  7(9Q34.3) MUTATED" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "AMP PEAK  7(9Q34.3) MUTATED"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK  7(9Q34.3) WILD-TYPE"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK  7(9Q34.3) WILD-TYPE"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK  7(9Q34.3) WILD-TYPE"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
  "AMP PEAK  7(9Q34.3) MUTATED" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK  7(9Q34.3) WILD-TYPE"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK  7(9Q34.3) WILD-TYPE"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
  "AMP PEAK  7(9Q34.3) MUTATED" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
  "AMP PEAK  7(9Q34.3) MUTATED"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "AMP PEAK  7(9Q34.3) MUTATED" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
  "AMP PEAK  7(9Q34.3) MUTATED" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK  7(9Q34.3) WILD-TYPE"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "AMP PEAK  7(9Q34.3) MUTATED" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "AMP PEAK  7(9Q34.3) MUTATED"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK  7(9Q34.3) WILD-TYPE"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK  7(9Q34.3) WILD-TYPE"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK  7(9Q34.3) WILD-TYPE"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
  "AMP PEAK  7(9Q34.3) MUTATED" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK  7(9Q34.3) WILD-TYPE"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK  7(9Q34.3) WILD-TYPE"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
  "AMP PEAK  7(9Q34.3) MUTATED" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
  "AMP PEAK  7(9Q34.3) MUTATED"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "AMP PEAK  7(9Q34.3) MUTATED" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
  "AMP PEAK  7(9Q34.3) MUTATED" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK  7(9Q34.3) WILD-TYPE"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "AMP PEAK  7(9Q34.3) MUTATED" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "AMP PEAK  7(9Q34.3) MUTATED"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK  7(9Q34.3) WILD-TYPE"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK  7(9Q34.3) WILD-TYPE"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK  7(9Q34.3) WILD-TYPE"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
  "AMP PEAK  7(9Q34.3) MUTATED" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK  7(9Q34.3) WILD-TYPE"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK  7(9Q34.3) WILD-TYPE"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
  "AMP PEAK  7(9Q34.3) MUTATED" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
  "AMP PEAK  7(9Q34.3) MUTATED"   "AMP PEAK  7(9Q34.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK  7(9Q34.3) WILD-TYPE" "AMP PEAK  7(9Q34.3) WILD-TYPE" 
[1] "hr="     "1.6e+09"
D7V2, continuous
                               vv
clus                            T2 T3 T4
  AMP PEAK  7(9Q34.3) MUTATED    2 12  1
  AMP PEAK  7(9Q34.3) WILD-TYPE 67 73  4
D7V3, multiclass
    clus
vv   AMP PEAK  7(9Q34.3) MUTATED AMP PEAK  7(9Q34.3) WILD-TYPE
  T2                           2                            67
  T3                          12                            73
  T4                           1                             4
D7V4, binary
                               cls
clus                              0   1
  AMP PEAK  7(9Q34.3) MUTATED     8   6
  AMP PEAK  7(9Q34.3) WILD-TYPE 118   9
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  7(9Q34.3) MUTATED      8    6
  AMP PEAK  7(9Q34.3) WILD-TYPE  118    9
   clus
vv  AMP PEAK  7(9Q34.3) MUTATED AMP PEAK  7(9Q34.3) WILD-TYPE
  0                           8                           118
  1                           6                             9
                               vv
clus                             R0  R1  RX
  AMP PEAK  7(9Q34.3) MUTATED     9   5   0
  AMP PEAK  7(9Q34.3) WILD-TYPE 110  26   3
D7V5, multiclass
    clus
vv   AMP PEAK  7(9Q34.3) MUTATED AMP PEAK  7(9Q34.3) WILD-TYPE
  R0                           9                           110
  R1                           5                            26
  RX                           0                             3
D7V6, continuous

Clustering(8) Variable = AMP PEAK  8(11Q13.2) MUTATION ANALYSIS
D8V1, survival
                                sevent
clus2                              0   1
  AMP PEAK  8(11Q13.2) MUTATED     9   0
  AMP PEAK  8(11Q13.2) WILD-TYPE 150   1
  AMP PEAK  8(11Q13.2) MUTATED AMP PEAK  8(11Q13.2) WILD-TYPE 
                             9                            151 
  AMP PEAK  8(11Q13.2) MUTATED AMP PEAK  8(11Q13.2) WILD-TYPE 
                             0                              1 
$`AMP PEAK  8(11Q13.2) MUTATED`
TCGA-CH-5751 TCGA-CH-5788 TCGA-EJ-5495 TCGA-EJ-5511 TCGA-EJ-7784 TCGA-EJ-8472 
       35.01        26.96        19.89        25.91         5.49        66.12 
TCGA-G9-7523 TCGA-HC-8265 TCGA-HI-7168 
       10.65         2.04        65.92 

$`AMP PEAK  8(11Q13.2) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5753 
        1.97        24.03         1.02        12.99        30.97         1.02 
TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 
        2.04         0.92        44.02        12.00         1.02        23.01 
TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 
        1.02        15.06        24.03         2.04        12.99        15.95 
TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 
        9.96        32.02        33.01         2.99        28.96        12.43 
TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 
       19.53        13.02        17.62        17.49        23.97         8.02 
TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 
       17.42         7.53        14.70        11.70         5.98        29.82 
TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 
       36.03        24.23        25.71        23.80        34.88        25.74 
TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 
       27.91        39.29        37.91        27.68        46.13        27.42 
TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 
       25.97        18.64        13.05        41.82        23.80        29.92 
TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 
       17.06        26.99        48.99        61.15         9.70         9.50 
TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 
        9.37         7.66         5.75         5.59         6.28         0.30 
TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 
        5.56         2.10         4.31         8.48         2.60         1.71 
TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 
        2.30         7.13        17.29         1.41         9.34         6.15 
TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 
       63.98        26.99         5.33         1.05        30.35        65.92 
TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 
       63.29        54.87        54.21        43.99        18.21        37.61 
TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 
       39.95        27.85        32.88        33.14        27.02        32.65 
TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 
       27.65        26.43         3.32        28.77        27.98        26.50 
TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 
       27.81        16.60        17.03        21.83        12.82        11.70 
TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 
       47.41        33.34        36.46        22.16        15.02        15.98 
TCGA-G9-7522 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 TCGA-HC-7078 
       14.83        16.83         1.02         2.01        65.98         5.33 
TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7213 
        2.93         2.01         1.02         0.99         1.02         1.97 
TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7742 
        1.68         2.37         0.99         2.07         1.74         1.48 
TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7752 
        1.68         1.87         2.04         2.01         1.12         3.22 
TCGA-HC-7818 TCGA-HC-7821 TCGA-HC-A4ZV TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 
        1.48         1.84         0.76        64.08        62.43        66.02 
TCGA-J4-8198 
        3.22 

  AMP PEAK  8(11Q13.2) MUTATED AMP PEAK  8(11Q13.2) WILD-TYPE 
                          2.04                           0.30 
  AMP PEAK  8(11Q13.2) MUTATED AMP PEAK  8(11Q13.2) WILD-TYPE 
                         66.12                          66.02 
  AMP PEAK  8(11Q13.2) MUTATED AMP PEAK  8(11Q13.2) WILD-TYPE 
                         25.91                          14.83 
[1] "2.0 - 66.1 (25.9)" "0.3 - 66.0 (14.8)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "AMP PEAK  8(11Q13.2) MUTATED" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK  8(11Q13.2) WILD-TYPE"   "AMP PEAK  8(11Q13.2) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "AMP PEAK  8(11Q13.2) MUTATED" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK  8(11Q13.2) WILD-TYPE"   "AMP PEAK  8(11Q13.2) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK  8(11Q13.2) WILD-TYPE"   "AMP PEAK  8(11Q13.2) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"AMP PEAK  8(11Q13.2) WILD-TYPE"   "AMP PEAK  8(11Q13.2) MUTATED" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK  8(11Q13.2) WILD-TYPE"   "AMP PEAK  8(11Q13.2) MUTATED" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"AMP PEAK  8(11Q13.2) WILD-TYPE"   "AMP PEAK  8(11Q13.2) MUTATED" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"AMP PEAK  8(11Q13.2) WILD-TYPE"   "AMP PEAK  8(11Q13.2) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "AMP PEAK  8(11Q13.2) MUTATED" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK  8(11Q13.2) WILD-TYPE"   "AMP PEAK  8(11Q13.2) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "AMP PEAK  8(11Q13.2) MUTATED" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK  8(11Q13.2) WILD-TYPE"   "AMP PEAK  8(11Q13.2) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK  8(11Q13.2) WILD-TYPE"   "AMP PEAK  8(11Q13.2) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"AMP PEAK  8(11Q13.2) WILD-TYPE"   "AMP PEAK  8(11Q13.2) MUTATED" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK  8(11Q13.2) WILD-TYPE"   "AMP PEAK  8(11Q13.2) MUTATED" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"AMP PEAK  8(11Q13.2) WILD-TYPE"   "AMP PEAK  8(11Q13.2) MUTATED" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"AMP PEAK  8(11Q13.2) WILD-TYPE"   "AMP PEAK  8(11Q13.2) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "AMP PEAK  8(11Q13.2) MUTATED" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK  8(11Q13.2) WILD-TYPE"   "AMP PEAK  8(11Q13.2) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "AMP PEAK  8(11Q13.2) MUTATED" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK  8(11Q13.2) WILD-TYPE"   "AMP PEAK  8(11Q13.2) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK  8(11Q13.2) WILD-TYPE"   "AMP PEAK  8(11Q13.2) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"AMP PEAK  8(11Q13.2) WILD-TYPE"   "AMP PEAK  8(11Q13.2) MUTATED" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK  8(11Q13.2) WILD-TYPE"   "AMP PEAK  8(11Q13.2) MUTATED" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"AMP PEAK  8(11Q13.2) WILD-TYPE"   "AMP PEAK  8(11Q13.2) MUTATED" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"AMP PEAK  8(11Q13.2) WILD-TYPE"   "AMP PEAK  8(11Q13.2) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK  8(11Q13.2) WILD-TYPE" "AMP PEAK  8(11Q13.2) WILD-TYPE" 
[1] "hr="     "1.6e+09"
D8V2, continuous
                                vv
clus                             T2 T3 T4
  AMP PEAK  8(11Q13.2) MUTATED    1  7  1
  AMP PEAK  8(11Q13.2) WILD-TYPE 68 78  4
D8V3, multiclass
    clus
vv   AMP PEAK  8(11Q13.2) MUTATED AMP PEAK  8(11Q13.2) WILD-TYPE
  T2                            1                             68
  T3                            7                             78
  T4                            1                              4
D8V4, binary
                                cls
clus                               0   1
  AMP PEAK  8(11Q13.2) MUTATED     6   3
  AMP PEAK  8(11Q13.2) WILD-TYPE 120  12
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  8(11Q13.2) MUTATED      6    3
  AMP PEAK  8(11Q13.2) WILD-TYPE  120   12
   clus
vv  AMP PEAK  8(11Q13.2) MUTATED AMP PEAK  8(11Q13.2) WILD-TYPE
  0                            6                            120
  1                            3                             12
                                vv
clus                              R0  R1  RX
  AMP PEAK  8(11Q13.2) MUTATED     5   4   0
  AMP PEAK  8(11Q13.2) WILD-TYPE 114  27   3
D8V5, multiclass
    clus
vv   AMP PEAK  8(11Q13.2) MUTATED AMP PEAK  8(11Q13.2) WILD-TYPE
  R0                            5                            114
  R1                            4                             27
  RX                            0                              3
D8V6, continuous

Clustering(9) Variable = AMP PEAK  9(12Q24.32) MUTATION ANALYSIS
D9V1, survival
                                 sevent
clus2                               0   1
  AMP PEAK  9(12Q24.32) MUTATED     6   1
  AMP PEAK  9(12Q24.32) WILD-TYPE 153   0
  AMP PEAK  9(12Q24.32) MUTATED AMP PEAK  9(12Q24.32) WILD-TYPE 
                              7                             153 
  AMP PEAK  9(12Q24.32) MUTATED AMP PEAK  9(12Q24.32) WILD-TYPE 
                              1                               0 
$`AMP PEAK  9(12Q24.32) MUTATED`
TCGA-CH-5751 TCGA-CH-5761 TCGA-CH-5762 TCGA-EJ-5510 TCGA-EJ-5514 TCGA-EJ-5519 
       35.01         0.92        44.02        24.23        23.80        37.91 
TCGA-HI-7171 
       66.02 

$`AMP PEAK  9(12Q24.32) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5753 
        1.97        24.03         1.02        12.99        30.97         1.02 
TCGA-CH-5754 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 
        2.04        12.00         1.02        23.01         1.02        15.06 
TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 
       24.03         2.04        12.99        15.95        26.96         9.96 
TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 
       32.02        33.01         2.99        28.96        12.43        19.89 
TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 
       19.53        13.02        17.62        17.49        23.97         8.02 
TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 
       17.42         7.53        14.70        11.70         5.98        29.82 
TCGA-EJ-5509 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 
       36.03        25.91        25.71        34.88        25.74        27.91 
TCGA-EJ-5518 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 
       39.29        27.68        46.13        27.42        25.97        18.64 
TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 
       13.05        41.82        23.80        29.92        17.06        26.99 
TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 
       48.99        61.15         9.70         9.50         9.37         7.66 
TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 
        5.75         5.59         6.28         0.30         5.56         2.10 
TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7789 
        4.31         5.49         8.48         2.60         1.71         2.30 
TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 
        7.13        17.29         1.41         9.34         6.15        63.98 
TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 
       26.99        66.12         5.33         1.05        30.35        65.92 
TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 
       63.29        54.87        54.21        43.99        18.21        37.61 
TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 
       39.95        27.85        32.88        33.14        27.02        32.65 
TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 
       27.65        26.43         3.32        28.77        27.98        26.50 
TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 
       27.81        16.60        17.03        21.83        12.82        11.70 
TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 
       47.41        33.34        36.46        22.16        15.02        15.98 
TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 
       14.83        10.65        16.83         1.02         2.01        65.98 
TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 
        5.33         2.93         2.01         1.02         0.99         1.02 
TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 
        1.97         1.68         2.37         0.99         2.07         1.74 
TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7750 
        1.48         1.68         1.87         2.04         2.01         1.12 
TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-7821 TCGA-HC-8265 TCGA-HC-A4ZV TCGA-HI-7168 
        3.22         1.48         1.84         2.04         0.76        65.92 
TCGA-HI-7169 TCGA-HI-7170 TCGA-J4-8198 
       64.08        62.43         3.22 

  AMP PEAK  9(12Q24.32) MUTATED AMP PEAK  9(12Q24.32) WILD-TYPE 
                           0.92                            0.30 
  AMP PEAK  9(12Q24.32) MUTATED AMP PEAK  9(12Q24.32) WILD-TYPE 
                          66.02                           66.12 
  AMP PEAK  9(12Q24.32) MUTATED AMP PEAK  9(12Q24.32) WILD-TYPE 
                          35.01                           14.70 
[1] "0.9 - 66.0 (35.0)" "0.3 - 66.1 (14.7)"
                     TCGA-CH-5737                      TCGA-CH-5738 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5741                      TCGA-CH-5743 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5751                      TCGA-CH-5752 
  "AMP PEAK  9(12Q24.32) MUTATED" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5761                      TCGA-CH-5762 
  "AMP PEAK  9(12Q24.32) MUTATED"   "AMP PEAK  9(12Q24.32) MUTATED" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5765                      TCGA-CH-5766 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5769                      TCGA-CH-5771 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5772                      TCGA-CH-5788 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5791                      TCGA-CH-5792 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
  "AMP PEAK  9(12Q24.32) MUTATED" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
"AMP PEAK  9(12Q24.32) WILD-TYPE"   "AMP PEAK  9(12Q24.32) MUTATED" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
  "AMP PEAK  9(12Q24.32) MUTATED" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7797                      TCGA-EJ-8469 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-8470                      TCGA-EJ-8472 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-A46B                      TCGA-FC-7708 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6329                      TCGA-G9-6332 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6364                      TCGA-G9-6365 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6377                      TCGA-G9-6378 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-7519                      TCGA-G9-7521 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-7522                      TCGA-G9-7523 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7075                      TCGA-HC-7077 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7078                      TCGA-HC-7079 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7080                      TCGA-HC-7209 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7211                      TCGA-HC-7212 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7213                      TCGA-HC-7230 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7231                      TCGA-HC-7736 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7737                      TCGA-HC-7740 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7742                      TCGA-HC-7744 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7747                      TCGA-HC-7748 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7749                      TCGA-HC-7750 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7752                      TCGA-HC-7818 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7821                      TCGA-HC-8265 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-A4ZV                      TCGA-HI-7168 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "AMP PEAK  9(12Q24.32) MUTATED" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5737                      TCGA-CH-5738 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5741                      TCGA-CH-5743 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5751                      TCGA-CH-5752 
  "AMP PEAK  9(12Q24.32) MUTATED" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5761                      TCGA-CH-5762 
  "AMP PEAK  9(12Q24.32) MUTATED"   "AMP PEAK  9(12Q24.32) MUTATED" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5765                      TCGA-CH-5766 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5769                      TCGA-CH-5771 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5772                      TCGA-CH-5788 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5791                      TCGA-CH-5792 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
  "AMP PEAK  9(12Q24.32) MUTATED" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
"AMP PEAK  9(12Q24.32) WILD-TYPE"   "AMP PEAK  9(12Q24.32) MUTATED" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
  "AMP PEAK  9(12Q24.32) MUTATED" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7797                      TCGA-EJ-8469 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-8470                      TCGA-EJ-8472 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-A46B                      TCGA-FC-7708 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6329                      TCGA-G9-6332 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6364                      TCGA-G9-6365 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6377                      TCGA-G9-6378 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-7519                      TCGA-G9-7521 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-7522                      TCGA-G9-7523 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7075                      TCGA-HC-7077 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7078                      TCGA-HC-7079 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7080                      TCGA-HC-7209 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7211                      TCGA-HC-7212 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7213                      TCGA-HC-7230 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7231                      TCGA-HC-7736 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7737                      TCGA-HC-7740 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7742                      TCGA-HC-7744 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7747                      TCGA-HC-7748 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7749                      TCGA-HC-7750 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7752                      TCGA-HC-7818 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7821                      TCGA-HC-8265 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-A4ZV                      TCGA-HI-7168 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "AMP PEAK  9(12Q24.32) MUTATED" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5737                      TCGA-CH-5738 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5741                      TCGA-CH-5743 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5751                      TCGA-CH-5752 
  "AMP PEAK  9(12Q24.32) MUTATED" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5761                      TCGA-CH-5762 
  "AMP PEAK  9(12Q24.32) MUTATED"   "AMP PEAK  9(12Q24.32) MUTATED" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5765                      TCGA-CH-5766 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5769                      TCGA-CH-5771 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5772                      TCGA-CH-5788 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5791                      TCGA-CH-5792 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
  "AMP PEAK  9(12Q24.32) MUTATED" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
"AMP PEAK  9(12Q24.32) WILD-TYPE"   "AMP PEAK  9(12Q24.32) MUTATED" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
  "AMP PEAK  9(12Q24.32) MUTATED" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-7797                      TCGA-EJ-8469 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-8470                      TCGA-EJ-8472 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-EJ-A46B                      TCGA-FC-7708 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6329                      TCGA-G9-6332 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6364                      TCGA-G9-6365 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6377                      TCGA-G9-6378 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-7519                      TCGA-G9-7521 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-7522                      TCGA-G9-7523 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7075                      TCGA-HC-7077 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7078                      TCGA-HC-7079 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7080                      TCGA-HC-7209 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7211                      TCGA-HC-7212 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7213                      TCGA-HC-7230 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7231                      TCGA-HC-7736 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7737                      TCGA-HC-7740 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7742                      TCGA-HC-7744 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7747                      TCGA-HC-7748 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7749                      TCGA-HC-7750 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7752                      TCGA-HC-7818 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-7821                      TCGA-HC-8265 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HC-A4ZV                      TCGA-HI-7168 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"AMP PEAK  9(12Q24.32) WILD-TYPE" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "AMP PEAK  9(12Q24.32) MUTATED" "AMP PEAK  9(12Q24.32) WILD-TYPE" 
[1] "hr="     "1.6e+09"
D9V2, continuous
                                 vv
clus                              T2 T3 T4
  AMP PEAK  9(12Q24.32) MUTATED    2  4  1
  AMP PEAK  9(12Q24.32) WILD-TYPE 67 81  4
D9V3, multiclass
    clus
vv   AMP PEAK  9(12Q24.32) MUTATED AMP PEAK  9(12Q24.32) WILD-TYPE
  T2                             2                              67
  T3                             4                              81
  T4                             1                               4
D9V4, binary
                                 cls
clus                                0   1
  AMP PEAK  9(12Q24.32) MUTATED     5   2
  AMP PEAK  9(12Q24.32) WILD-TYPE 121  13
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  AMP PEAK  9(12Q24.32) MUTATED      5    2
  AMP PEAK  9(12Q24.32) WILD-TYPE  121   13
   clus
vv  AMP PEAK  9(12Q24.32) MUTATED AMP PEAK  9(12Q24.32) WILD-TYPE
  0                             5                             121
  1                             2                              13
                                 vv
clus                               R0  R1  RX
  AMP PEAK  9(12Q24.32) MUTATED     4   3   0
  AMP PEAK  9(12Q24.32) WILD-TYPE 115  28   3
D9V5, multiclass
    clus
vv   AMP PEAK  9(12Q24.32) MUTATED AMP PEAK  9(12Q24.32) WILD-TYPE
  R0                             4                             115
  R1                             3                              28
  RX                             0                               3
D9V6, continuous

Clustering(10) Variable = AMP PEAK 10(14Q21.1) MUTATION ANALYSIS
D10V1, survival
                                sevent
clus2                              0   1
  AMP PEAK 10(14Q21.1) MUTATED     8   0
  AMP PEAK 10(14Q21.1) WILD-TYPE 151   1
  AMP PEAK 10(14Q21.1) MUTATED AMP PEAK 10(14Q21.1) WILD-TYPE 
                             8                            152 
  AMP PEAK 10(14Q21.1) MUTATED AMP PEAK 10(14Q21.1) WILD-TYPE 
                             0                              1 
$`AMP PEAK 10(14Q21.1) MUTATED`
TCGA-CH-5752 TCGA-CH-5761 TCGA-CH-5772 TCGA-EJ-5495 TCGA-EJ-5514 TCGA-EJ-7331 
       30.97         0.92        15.95        19.89        23.80         0.30 
TCGA-G9-6366 TCGA-HC-8265 
        3.32         2.04 

$`AMP PEAK 10(14Q21.1) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5753 
        1.97        24.03         1.02        12.99        35.01         1.02 
TCGA-CH-5754 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5766 
        2.04        44.02        12.00         1.02        23.01         1.02 
TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5788 TCGA-CH-5789 
       15.06        24.03         2.04        12.99        26.96         9.96 
TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5496 
       32.02        33.01         2.99        28.96        12.43        19.53 
TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 
       13.02        17.62        17.49        23.97         8.02        17.42 
TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 
        7.53        14.70        11.70         5.98        29.82        36.03 
TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 
       24.23        25.91        25.71        34.88        25.74        27.91 
TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 
       39.29        37.91        27.68        46.13        27.42        25.97 
TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 
       18.64        13.05        41.82        23.80        29.92        17.06 
TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 
       26.99        48.99        61.15         9.70         9.50         9.37 
TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7781 TCGA-EJ-7782 
        7.66         5.75         5.59         6.28         5.56         2.10 
TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7789 
        4.31         5.49         8.48         2.60         1.71         2.30 
TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 
        7.13        17.29         1.41         9.34         6.15        63.98 
TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 
       26.99        66.12         5.33         1.05        30.35        65.92 
TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 
       63.29        54.87        54.21        43.99        18.21        37.61 
TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 
       39.95        27.85        32.88        33.14        27.02        32.65 
TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 
       27.65        26.43        28.77        27.98        26.50        27.81 
TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 
       16.60        17.03        21.83        12.82        11.70        47.41 
TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 
       33.34        36.46        22.16        15.02        15.98        14.83 
TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 TCGA-HC-7078 
       10.65        16.83         1.02         2.01        65.98         5.33 
TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7213 
        2.93         2.01         1.02         0.99         1.02         1.97 
TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7742 
        1.68         2.37         0.99         2.07         1.74         1.48 
TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7752 
        1.68         1.87         2.04         2.01         1.12         3.22 
TCGA-HC-7818 TCGA-HC-7821 TCGA-HC-A4ZV TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 
        1.48         1.84         0.76        65.92        64.08        62.43 
TCGA-HI-7171 TCGA-J4-8198 
       66.02         3.22 

  AMP PEAK 10(14Q21.1) MUTATED AMP PEAK 10(14Q21.1) WILD-TYPE 
                          0.30                           0.76 
  AMP PEAK 10(14Q21.1) MUTATED AMP PEAK 10(14Q21.1) WILD-TYPE 
                         30.97                          66.12 
  AMP PEAK 10(14Q21.1) MUTATED AMP PEAK 10(14Q21.1) WILD-TYPE 
                         9.635                         15.040 
[1] "0.3 - 31.0 (9.6)"  "0.8 - 66.1 (15.0)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK 10(14Q21.1) WILD-TYPE"   "AMP PEAK 10(14Q21.1) MUTATED" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "AMP PEAK 10(14Q21.1) MUTATED" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
  "AMP PEAK 10(14Q21.1) MUTATED" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "AMP PEAK 10(14Q21.1) MUTATED" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK 10(14Q21.1) WILD-TYPE"   "AMP PEAK 10(14Q21.1) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK 10(14Q21.1) WILD-TYPE"   "AMP PEAK 10(14Q21.1) MUTATED" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
  "AMP PEAK 10(14Q21.1) MUTATED" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"AMP PEAK 10(14Q21.1) WILD-TYPE"   "AMP PEAK 10(14Q21.1) MUTATED" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK 10(14Q21.1) WILD-TYPE"   "AMP PEAK 10(14Q21.1) MUTATED" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "AMP PEAK 10(14Q21.1) MUTATED" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
  "AMP PEAK 10(14Q21.1) MUTATED" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "AMP PEAK 10(14Q21.1) MUTATED" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK 10(14Q21.1) WILD-TYPE"   "AMP PEAK 10(14Q21.1) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK 10(14Q21.1) WILD-TYPE"   "AMP PEAK 10(14Q21.1) MUTATED" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
  "AMP PEAK 10(14Q21.1) MUTATED" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"AMP PEAK 10(14Q21.1) WILD-TYPE"   "AMP PEAK 10(14Q21.1) MUTATED" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK 10(14Q21.1) WILD-TYPE"   "AMP PEAK 10(14Q21.1) MUTATED" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "AMP PEAK 10(14Q21.1) MUTATED" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
  "AMP PEAK 10(14Q21.1) MUTATED" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "AMP PEAK 10(14Q21.1) MUTATED" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK 10(14Q21.1) WILD-TYPE"   "AMP PEAK 10(14Q21.1) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK 10(14Q21.1) WILD-TYPE"   "AMP PEAK 10(14Q21.1) MUTATED" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
  "AMP PEAK 10(14Q21.1) MUTATED" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"AMP PEAK 10(14Q21.1) WILD-TYPE"   "AMP PEAK 10(14Q21.1) MUTATED" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK 10(14Q21.1) WILD-TYPE" "AMP PEAK 10(14Q21.1) WILD-TYPE" 
[1] "hr=" "1"  
D10V2, continuous
                                vv
clus                             T2 T3 T4
  AMP PEAK 10(14Q21.1) MUTATED    2  6  0
  AMP PEAK 10(14Q21.1) WILD-TYPE 67 79  5
D10V3, multiclass
    clus
vv   AMP PEAK 10(14Q21.1) MUTATED AMP PEAK 10(14Q21.1) WILD-TYPE
  T2                            2                             67
  T3                            6                             79
  T4                            0                              5
D10V4, binary
                                cls
clus                               0   1
  AMP PEAK 10(14Q21.1) MUTATED     6   1
  AMP PEAK 10(14Q21.1) WILD-TYPE 120  14
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 10(14Q21.1) MUTATED      6    1
  AMP PEAK 10(14Q21.1) WILD-TYPE  120   14
   clus
vv  AMP PEAK 10(14Q21.1) MUTATED AMP PEAK 10(14Q21.1) WILD-TYPE
  0                            6                            120
  1                            1                             14
                                vv
clus                              R0  R1  RX
  AMP PEAK 10(14Q21.1) MUTATED     5   3   0
  AMP PEAK 10(14Q21.1) WILD-TYPE 114  28   3
D10V5, multiclass
    clus
vv   AMP PEAK 10(14Q21.1) MUTATED AMP PEAK 10(14Q21.1) WILD-TYPE
  R0                            5                            114
  R1                            3                             28
  RX                            0                              3
D10V6, continuous

Clustering(11) Variable = AMP PEAK 11(20Q13.33) MUTATION ANALYSIS
D11V1, survival
                                 sevent
clus2                               0   1
  AMP PEAK 11(20Q13.33) MUTATED    12   0
  AMP PEAK 11(20Q13.33) WILD-TYPE 147   1
  AMP PEAK 11(20Q13.33) MUTATED AMP PEAK 11(20Q13.33) WILD-TYPE 
                             12                             148 
  AMP PEAK 11(20Q13.33) MUTATED AMP PEAK 11(20Q13.33) WILD-TYPE 
                              0                               1 
$`AMP PEAK 11(20Q13.33) MUTATED`
TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5772 TCGA-EJ-5518 TCGA-EJ-5532 TCGA-EJ-7314 
        0.92        44.02        15.95        39.29        29.92         9.70 
TCGA-EJ-7315 TCGA-G9-6494 TCGA-G9-6499 TCGA-G9-7510 TCGA-HC-8265 TCGA-HI-7168 
        9.50        47.41        36.46        22.16         2.04        65.92 

$`AMP PEAK 11(20Q13.33) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5766 
        1.02         2.04        12.00         1.02        23.01         1.02 
TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5788 TCGA-CH-5789 
       15.06        24.03         2.04        12.99        26.96         9.96 
TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 
       32.02        33.01         2.99        28.96        12.43        19.89 
TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 
       19.53        13.02        17.62        17.49        23.97         8.02 
TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 
       17.42         7.53        14.70        11.70         5.98        29.82 
TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 
       36.03        24.23        25.91        25.71        23.80        34.88 
TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 
       25.74        27.91        37.91        27.68        46.13        27.42 
TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5542 
       25.97        18.64        13.05        41.82        23.80        17.06 
TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 
       26.99        48.99        61.15         9.37         7.66         5.75 
TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 
        5.59         6.28         0.30         5.56         2.10         4.31 
TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7789 TCGA-EJ-7791 
        5.49         8.48         2.60         1.71         2.30         7.13 
TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 TCGA-EJ-8470 
       17.29         1.41         9.34         6.15        63.98        26.99 
TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 
       66.12         5.33         1.05        30.35        65.92        63.29 
TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 
       54.87        54.21        43.99        18.21        37.61        39.95 
TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 
       27.85        32.88        33.14        27.02        32.65        27.65 
TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 
       26.43         3.32        28.77        27.98        26.50        27.81 
TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6496 
       16.60        17.03        21.83        12.82        11.70        33.34 
TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 
       15.02        15.98        14.83        10.65        16.83         1.02 
TCGA-HC-7075 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 
        2.01        65.98         5.33         2.93         2.01         1.02 
TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 
        0.99         1.02         1.97         1.68         2.37         0.99 
TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 
        2.07         1.74         1.48         1.68         1.87         2.04 
TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-7821 TCGA-HC-A4ZV 
        2.01         1.12         3.22         1.48         1.84         0.76 
TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       64.08        62.43        66.02         3.22 

  AMP PEAK 11(20Q13.33) MUTATED AMP PEAK 11(20Q13.33) WILD-TYPE 
                           0.92                            0.30 
  AMP PEAK 11(20Q13.33) MUTATED AMP PEAK 11(20Q13.33) WILD-TYPE 
                          65.92                           66.12 
  AMP PEAK 11(20Q13.33) MUTATED AMP PEAK 11(20Q13.33) WILD-TYPE 
                         26.040                          14.765 
[1] "0.9 - 65.9 (26.0)" "0.3 - 66.1 (14.8)"
                     TCGA-CH-5737                      TCGA-CH-5738 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5741                      TCGA-CH-5743 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5751                      TCGA-CH-5752 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5761                      TCGA-CH-5762 
  "AMP PEAK 11(20Q13.33) MUTATED"   "AMP PEAK 11(20Q13.33) MUTATED" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5765                      TCGA-CH-5766 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5769                      TCGA-CH-5771 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5772                      TCGA-CH-5788 
  "AMP PEAK 11(20Q13.33) MUTATED" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5791                      TCGA-CH-5792 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"AMP PEAK 11(20Q13.33) WILD-TYPE"   "AMP PEAK 11(20Q13.33) MUTATED" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
"AMP PEAK 11(20Q13.33) WILD-TYPE"   "AMP PEAK 11(20Q13.33) MUTATED" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
  "AMP PEAK 11(20Q13.33) MUTATED"   "AMP PEAK 11(20Q13.33) MUTATED" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7797                      TCGA-EJ-8469 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-8470                      TCGA-EJ-8472 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-A46B                      TCGA-FC-7708 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6329                      TCGA-G9-6332 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6364                      TCGA-G9-6365 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6377                      TCGA-G9-6378 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
  "AMP PEAK 11(20Q13.33) MUTATED" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
  "AMP PEAK 11(20Q13.33) MUTATED"   "AMP PEAK 11(20Q13.33) MUTATED" 
                     TCGA-G9-7519                      TCGA-G9-7521 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-7522                      TCGA-G9-7523 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7075                      TCGA-HC-7077 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7078                      TCGA-HC-7079 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7080                      TCGA-HC-7209 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7211                      TCGA-HC-7212 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7213                      TCGA-HC-7230 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7231                      TCGA-HC-7736 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7737                      TCGA-HC-7740 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7742                      TCGA-HC-7744 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7747                      TCGA-HC-7748 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7749                      TCGA-HC-7750 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7752                      TCGA-HC-7818 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7821                      TCGA-HC-8265 
"AMP PEAK 11(20Q13.33) WILD-TYPE"   "AMP PEAK 11(20Q13.33) MUTATED" 
                     TCGA-HC-A4ZV                      TCGA-HI-7168 
"AMP PEAK 11(20Q13.33) WILD-TYPE"   "AMP PEAK 11(20Q13.33) MUTATED" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5737                      TCGA-CH-5738 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5741                      TCGA-CH-5743 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5751                      TCGA-CH-5752 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5761                      TCGA-CH-5762 
  "AMP PEAK 11(20Q13.33) MUTATED"   "AMP PEAK 11(20Q13.33) MUTATED" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5765                      TCGA-CH-5766 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5769                      TCGA-CH-5771 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5772                      TCGA-CH-5788 
  "AMP PEAK 11(20Q13.33) MUTATED" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5791                      TCGA-CH-5792 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"AMP PEAK 11(20Q13.33) WILD-TYPE"   "AMP PEAK 11(20Q13.33) MUTATED" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
"AMP PEAK 11(20Q13.33) WILD-TYPE"   "AMP PEAK 11(20Q13.33) MUTATED" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
  "AMP PEAK 11(20Q13.33) MUTATED"   "AMP PEAK 11(20Q13.33) MUTATED" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7797                      TCGA-EJ-8469 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-8470                      TCGA-EJ-8472 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-A46B                      TCGA-FC-7708 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6329                      TCGA-G9-6332 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6364                      TCGA-G9-6365 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6377                      TCGA-G9-6378 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
  "AMP PEAK 11(20Q13.33) MUTATED" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
  "AMP PEAK 11(20Q13.33) MUTATED"   "AMP PEAK 11(20Q13.33) MUTATED" 
                     TCGA-G9-7519                      TCGA-G9-7521 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-7522                      TCGA-G9-7523 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7075                      TCGA-HC-7077 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7078                      TCGA-HC-7079 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7080                      TCGA-HC-7209 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7211                      TCGA-HC-7212 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7213                      TCGA-HC-7230 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7231                      TCGA-HC-7736 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7737                      TCGA-HC-7740 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7742                      TCGA-HC-7744 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7747                      TCGA-HC-7748 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7749                      TCGA-HC-7750 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7752                      TCGA-HC-7818 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7821                      TCGA-HC-8265 
"AMP PEAK 11(20Q13.33) WILD-TYPE"   "AMP PEAK 11(20Q13.33) MUTATED" 
                     TCGA-HC-A4ZV                      TCGA-HI-7168 
"AMP PEAK 11(20Q13.33) WILD-TYPE"   "AMP PEAK 11(20Q13.33) MUTATED" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5737                      TCGA-CH-5738 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5741                      TCGA-CH-5743 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5751                      TCGA-CH-5752 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5761                      TCGA-CH-5762 
  "AMP PEAK 11(20Q13.33) MUTATED"   "AMP PEAK 11(20Q13.33) MUTATED" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5765                      TCGA-CH-5766 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5769                      TCGA-CH-5771 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5772                      TCGA-CH-5788 
  "AMP PEAK 11(20Q13.33) MUTATED" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5791                      TCGA-CH-5792 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"AMP PEAK 11(20Q13.33) WILD-TYPE"   "AMP PEAK 11(20Q13.33) MUTATED" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
"AMP PEAK 11(20Q13.33) WILD-TYPE"   "AMP PEAK 11(20Q13.33) MUTATED" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
  "AMP PEAK 11(20Q13.33) MUTATED"   "AMP PEAK 11(20Q13.33) MUTATED" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-7797                      TCGA-EJ-8469 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-8470                      TCGA-EJ-8472 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-EJ-A46B                      TCGA-FC-7708 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6329                      TCGA-G9-6332 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6364                      TCGA-G9-6365 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6377                      TCGA-G9-6378 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
  "AMP PEAK 11(20Q13.33) MUTATED" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
  "AMP PEAK 11(20Q13.33) MUTATED"   "AMP PEAK 11(20Q13.33) MUTATED" 
                     TCGA-G9-7519                      TCGA-G9-7521 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-7522                      TCGA-G9-7523 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7075                      TCGA-HC-7077 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7078                      TCGA-HC-7079 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7080                      TCGA-HC-7209 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7211                      TCGA-HC-7212 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7213                      TCGA-HC-7230 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7231                      TCGA-HC-7736 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7737                      TCGA-HC-7740 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7742                      TCGA-HC-7744 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7747                      TCGA-HC-7748 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7749                      TCGA-HC-7750 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7752                      TCGA-HC-7818 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HC-7821                      TCGA-HC-8265 
"AMP PEAK 11(20Q13.33) WILD-TYPE"   "AMP PEAK 11(20Q13.33) MUTATED" 
                     TCGA-HC-A4ZV                      TCGA-HI-7168 
"AMP PEAK 11(20Q13.33) WILD-TYPE"   "AMP PEAK 11(20Q13.33) MUTATED" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
"AMP PEAK 11(20Q13.33) WILD-TYPE" "AMP PEAK 11(20Q13.33) WILD-TYPE" 
[1] "hr=" "1"  
D11V2, continuous
                                 vv
clus                              T2 T3 T4
  AMP PEAK 11(20Q13.33) MUTATED    0 10  2
  AMP PEAK 11(20Q13.33) WILD-TYPE 69 75  3
D11V3, multiclass
    clus
vv   AMP PEAK 11(20Q13.33) MUTATED AMP PEAK 11(20Q13.33) WILD-TYPE
  T2                             0                              69
  T3                            10                              75
  T4                             2                               3
D11V4, binary
                                 cls
clus                                0   1
  AMP PEAK 11(20Q13.33) MUTATED    12   0
  AMP PEAK 11(20Q13.33) WILD-TYPE 114  15
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  AMP PEAK 11(20Q13.33) MUTATED     12    0
  AMP PEAK 11(20Q13.33) WILD-TYPE  114   15
   clus
vv  AMP PEAK 11(20Q13.33) MUTATED AMP PEAK 11(20Q13.33) WILD-TYPE
  0                            12                             114
  1                             0                              15
                                 vv
clus                               R0  R1  RX
  AMP PEAK 11(20Q13.33) MUTATED     6   6   0
  AMP PEAK 11(20Q13.33) WILD-TYPE 113  25   3
D11V5, multiclass
    clus
vv   AMP PEAK 11(20Q13.33) MUTATED AMP PEAK 11(20Q13.33) WILD-TYPE
  R0                             6                             113
  R1                             6                              25
  RX                             0                               3
D11V6, continuous

Clustering(12) Variable = AMP PEAK 12(XP22.11) MUTATION ANALYSIS
D12V1, survival
                                sevent
clus2                              0   1
  AMP PEAK 12(XP22.11) MUTATED     6   0
  AMP PEAK 12(XP22.11) WILD-TYPE 153   1
  AMP PEAK 12(XP22.11) MUTATED AMP PEAK 12(XP22.11) WILD-TYPE 
                             6                            154 
  AMP PEAK 12(XP22.11) MUTATED AMP PEAK 12(XP22.11) WILD-TYPE 
                             0                              1 
$`AMP PEAK 12(XP22.11) MUTATED`
TCGA-EJ-7789 TCGA-HC-7742 TCGA-HC-7747 TCGA-HC-7818 TCGA-HC-7821 TCGA-HC-A4ZV 
        2.30         1.48         1.87         1.48         1.84         0.76 

$`AMP PEAK 12(XP22.11) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
       15.95        26.96         9.96        32.02        33.01         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 
       17.49        23.97         8.02        17.42         7.53        14.70 
TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 
       11.70         5.98        29.82        36.03        24.23        25.91 
TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 
       25.71        23.80        34.88        25.74        27.91        39.29 
TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 
       37.91        27.68        46.13        27.42        25.97        18.64 
TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 
       13.05        41.82        23.80        29.92        17.06        26.99 
TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 
       48.99        61.15         9.70         9.50         9.37         7.66 
TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 
        5.75         5.59         6.28         0.30         5.56         2.10 
TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 
        4.31         5.49         8.48         2.60         1.71         7.13 
TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 TCGA-EJ-8470 
       17.29         1.41         9.34         6.15        63.98        26.99 
TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 
       66.12         5.33         1.05        30.35        65.92        63.29 
TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 
       54.87        54.21        43.99        18.21        37.61        39.95 
TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 
       27.85        32.88        33.14        27.02        32.65        27.65 
TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 
       26.43         3.32        28.77        27.98        26.50        27.81 
TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 
       16.60        17.03        21.83        12.82        11.70        47.41 
TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 
       33.34        36.46        22.16        15.02        15.98        14.83 
TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 TCGA-HC-7078 
       10.65        16.83         1.02         2.01        65.98         5.33 
TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7213 
        2.93         2.01         1.02         0.99         1.02         1.97 
TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7744 
        1.68         2.37         0.99         2.07         1.74         1.68 
TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-8265 TCGA-HI-7168 
        2.04         2.01         1.12         3.22         2.04        65.92 
TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       64.08        62.43        66.02         3.22 

  AMP PEAK 12(XP22.11) MUTATED AMP PEAK 12(XP22.11) WILD-TYPE 
                          0.76                           0.30 
  AMP PEAK 12(XP22.11) MUTATED AMP PEAK 12(XP22.11) WILD-TYPE 
                          2.30                          66.12 
  AMP PEAK 12(XP22.11) MUTATED AMP PEAK 12(XP22.11) WILD-TYPE 
                          1.66                          16.29 
[1] "0.8 - 2.3 (1.7)"   "0.3 - 66.1 (16.3)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK 12(XP22.11) WILD-TYPE"   "AMP PEAK 12(XP22.11) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
  "AMP PEAK 12(XP22.11) MUTATED" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
  "AMP PEAK 12(XP22.11) MUTATED" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"AMP PEAK 12(XP22.11) WILD-TYPE"   "AMP PEAK 12(XP22.11) MUTATED" 
                    TCGA-HC-7821                     TCGA-HC-8265 
  "AMP PEAK 12(XP22.11) MUTATED" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "AMP PEAK 12(XP22.11) MUTATED" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK 12(XP22.11) WILD-TYPE"   "AMP PEAK 12(XP22.11) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
  "AMP PEAK 12(XP22.11) MUTATED" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
  "AMP PEAK 12(XP22.11) MUTATED" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"AMP PEAK 12(XP22.11) WILD-TYPE"   "AMP PEAK 12(XP22.11) MUTATED" 
                    TCGA-HC-7821                     TCGA-HC-8265 
  "AMP PEAK 12(XP22.11) MUTATED" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "AMP PEAK 12(XP22.11) MUTATED" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK 12(XP22.11) WILD-TYPE"   "AMP PEAK 12(XP22.11) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
  "AMP PEAK 12(XP22.11) MUTATED" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
  "AMP PEAK 12(XP22.11) MUTATED" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"AMP PEAK 12(XP22.11) WILD-TYPE"   "AMP PEAK 12(XP22.11) MUTATED" 
                    TCGA-HC-7821                     TCGA-HC-8265 
  "AMP PEAK 12(XP22.11) MUTATED" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "AMP PEAK 12(XP22.11) MUTATED" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK 12(XP22.11) WILD-TYPE" "AMP PEAK 12(XP22.11) WILD-TYPE" 
[1] "hr=" "1"  
D12V2, continuous
                                vv
clus                             T2 T3 T4
  AMP PEAK 12(XP22.11) MUTATED    2  4  0
  AMP PEAK 12(XP22.11) WILD-TYPE 67 81  5
D12V3, multiclass
    clus
vv   AMP PEAK 12(XP22.11) MUTATED AMP PEAK 12(XP22.11) WILD-TYPE
  T2                            2                             67
  T3                            4                             81
  T4                            0                              5
D12V4, binary
                                cls
clus                               0   1
  AMP PEAK 12(XP22.11) MUTATED     5   1
  AMP PEAK 12(XP22.11) WILD-TYPE 121  14
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 12(XP22.11) MUTATED      5    1
  AMP PEAK 12(XP22.11) WILD-TYPE  121   14
   clus
vv  AMP PEAK 12(XP22.11) MUTATED AMP PEAK 12(XP22.11) WILD-TYPE
  0                            5                            121
  1                            1                             14
                                vv
clus                              R0  R1  RX
  AMP PEAK 12(XP22.11) MUTATED     3   1   0
  AMP PEAK 12(XP22.11) WILD-TYPE 116  30   3
D12V5, multiclass
    clus
vv   AMP PEAK 12(XP22.11) MUTATED AMP PEAK 12(XP22.11) WILD-TYPE
  R0                            3                            116
  R1                            1                             30
  RX                            0                              3
D12V6, continuous

Clustering(13) Variable = AMP PEAK 13(XP22.11) MUTATION ANALYSIS
D13V1, survival
                                sevent
clus2                              0   1
  AMP PEAK 13(XP22.11) MUTATED     6   0
  AMP PEAK 13(XP22.11) WILD-TYPE 153   1
  AMP PEAK 13(XP22.11) MUTATED AMP PEAK 13(XP22.11) WILD-TYPE 
                             6                            154 
  AMP PEAK 13(XP22.11) MUTATED AMP PEAK 13(XP22.11) WILD-TYPE 
                             0                              1 
$`AMP PEAK 13(XP22.11) MUTATED`
TCGA-EJ-5502 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-7789 TCGA-HC-7821 TCGA-HC-A4ZV 
        8.02        25.74        27.91         2.30         1.84         0.76 

$`AMP PEAK 13(XP22.11) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
       15.95        26.96         9.96        32.02        33.01         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 
       17.49        23.97        17.42         7.53        14.70        11.70 
TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 
        5.98        29.82        36.03        24.23        25.91        25.71 
TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 
       23.80        34.88        39.29        37.91        27.68        46.13 
TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 
       27.42        25.97        18.64        13.05        41.82        23.80 
TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 
       29.92        17.06        26.99        48.99        61.15         9.70 
TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 
        9.50         9.37         7.66         5.75         5.59         6.28 
TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 
        0.30         5.56         2.10         4.31         5.49         8.48 
TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 
        2.60         1.71         7.13        17.29         1.41         9.34 
TCGA-EJ-7797 TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 
        6.15        63.98        26.99        66.12         5.33         1.05 
TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 
       30.35        65.92        63.29        54.87        54.21        43.99 
TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 
       18.21        37.61        39.95        27.85        32.88        33.14 
TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 
       27.02        32.65        27.65        26.43         3.32        28.77 
TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 
       27.98        26.50        27.81        16.60        17.03        21.83 
TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 
       12.82        11.70        47.41        33.34        36.46        22.16 
TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 
       15.02        15.98        14.83        10.65        16.83         1.02 
TCGA-HC-7075 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 
        2.01        65.98         5.33         2.93         2.01         1.02 
TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 
        0.99         1.02         1.97         1.68         2.37         0.99 
TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 
        2.07         1.74         1.48         1.68         1.87         2.04 
TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-8265 TCGA-HI-7168 
        2.01         1.12         3.22         1.48         2.04        65.92 
TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       64.08        62.43        66.02         3.22 

  AMP PEAK 13(XP22.11) MUTATED AMP PEAK 13(XP22.11) WILD-TYPE 
                          0.76                           0.30 
  AMP PEAK 13(XP22.11) MUTATED AMP PEAK 13(XP22.11) WILD-TYPE 
                         27.91                          66.12 
  AMP PEAK 13(XP22.11) MUTATED AMP PEAK 13(XP22.11) WILD-TYPE 
                         5.160                         15.505 
[1] "0.8 - 27.9 (5.2)"  "0.3 - 66.1 (15.5)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
  "AMP PEAK 13(XP22.11) MUTATED" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK 13(XP22.11) WILD-TYPE"   "AMP PEAK 13(XP22.11) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "AMP PEAK 13(XP22.11) MUTATED" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK 13(XP22.11) WILD-TYPE"   "AMP PEAK 13(XP22.11) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
  "AMP PEAK 13(XP22.11) MUTATED" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "AMP PEAK 13(XP22.11) MUTATED" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
  "AMP PEAK 13(XP22.11) MUTATED" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK 13(XP22.11) WILD-TYPE"   "AMP PEAK 13(XP22.11) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "AMP PEAK 13(XP22.11) MUTATED" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK 13(XP22.11) WILD-TYPE"   "AMP PEAK 13(XP22.11) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
  "AMP PEAK 13(XP22.11) MUTATED" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "AMP PEAK 13(XP22.11) MUTATED" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
  "AMP PEAK 13(XP22.11) MUTATED" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK 13(XP22.11) WILD-TYPE"   "AMP PEAK 13(XP22.11) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "AMP PEAK 13(XP22.11) MUTATED" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK 13(XP22.11) WILD-TYPE"   "AMP PEAK 13(XP22.11) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
  "AMP PEAK 13(XP22.11) MUTATED" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "AMP PEAK 13(XP22.11) MUTATED" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK 13(XP22.11) WILD-TYPE" "AMP PEAK 13(XP22.11) WILD-TYPE" 
[1] "hr=" "1"  
D13V2, continuous
                                vv
clus                             T2 T3 T4
  AMP PEAK 13(XP22.11) MUTATED    2  4  0
  AMP PEAK 13(XP22.11) WILD-TYPE 67 81  5
D13V3, multiclass
    clus
vv   AMP PEAK 13(XP22.11) MUTATED AMP PEAK 13(XP22.11) WILD-TYPE
  T2                            2                             67
  T3                            4                             81
  T4                            0                              5
D13V4, binary
                                cls
clus                               0   1
  AMP PEAK 13(XP22.11) MUTATED     5   1
  AMP PEAK 13(XP22.11) WILD-TYPE 121  14
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 13(XP22.11) MUTATED      5    1
  AMP PEAK 13(XP22.11) WILD-TYPE  121   14
   clus
vv  AMP PEAK 13(XP22.11) MUTATED AMP PEAK 13(XP22.11) WILD-TYPE
  0                            5                            121
  1                            1                             14
                                vv
clus                              R0  R1  RX
  AMP PEAK 13(XP22.11) MUTATED     4   1   0
  AMP PEAK 13(XP22.11) WILD-TYPE 115  30   3
D13V5, multiclass
    clus
vv   AMP PEAK 13(XP22.11) MUTATED AMP PEAK 13(XP22.11) WILD-TYPE
  R0                            4                            115
  R1                            1                             30
  RX                            0                              3
D13V6, continuous

Clustering(14) Variable = AMP PEAK 14(XP21.1) MUTATION ANALYSIS
D14V1, survival
                               sevent
clus2                             0   1
  AMP PEAK 14(XP21.1) MUTATED     5   0
  AMP PEAK 14(XP21.1) WILD-TYPE 154   1
  AMP PEAK 14(XP21.1) MUTATED AMP PEAK 14(XP21.1) WILD-TYPE 
                            5                           155 
  AMP PEAK 14(XP21.1) MUTATED AMP PEAK 14(XP21.1) WILD-TYPE 
                            0                             1 
$`AMP PEAK 14(XP21.1) MUTATED`
TCGA-EJ-5495 TCGA-EJ-5499 TCGA-EJ-5530 TCGA-EJ-7789 TCGA-HC-A4ZV 
       19.89        17.49        41.82         2.30         0.76 

$`AMP PEAK 14(XP21.1) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
       15.95        26.96         9.96        32.02        33.01         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5501 
       28.96        12.43        19.53        13.02        17.62        23.97 
TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 
        8.02        17.42         7.53        14.70        11.70         5.98 
TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 
       29.82        36.03        24.23        25.91        25.71        23.80 
TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5521 
       34.88        25.74        27.91        39.29        37.91        27.68 
TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5531 
       46.13        27.42        25.97        18.64        13.05        23.80 
TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 
       29.92        17.06        26.99        48.99        61.15         9.70 
TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 
        9.50         9.37         7.66         5.75         5.59         6.28 
TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 
        0.30         5.56         2.10         4.31         5.49         8.48 
TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 
        2.60         1.71         7.13        17.29         1.41         9.34 
TCGA-EJ-7797 TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 
        6.15        63.98        26.99        66.12         5.33         1.05 
TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 
       30.35        65.92        63.29        54.87        54.21        43.99 
TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 
       18.21        37.61        39.95        27.85        32.88        33.14 
TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 
       27.02        32.65        27.65        26.43         3.32        28.77 
TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 
       27.98        26.50        27.81        16.60        17.03        21.83 
TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 
       12.82        11.70        47.41        33.34        36.46        22.16 
TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 
       15.02        15.98        14.83        10.65        16.83         1.02 
TCGA-HC-7075 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 
        2.01        65.98         5.33         2.93         2.01         1.02 
TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 
        0.99         1.02         1.97         1.68         2.37         0.99 
TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 
        2.07         1.74         1.48         1.68         1.87         2.04 
TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-7821 TCGA-HC-8265 
        2.01         1.12         3.22         1.48         1.84         2.04 
TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       65.92        64.08        62.43        66.02         3.22 

  AMP PEAK 14(XP21.1) MUTATED AMP PEAK 14(XP21.1) WILD-TYPE 
                         0.76                          0.30 
  AMP PEAK 14(XP21.1) MUTATED AMP PEAK 14(XP21.1) WILD-TYPE 
                        41.82                         66.12 
  AMP PEAK 14(XP21.1) MUTATED AMP PEAK 14(XP21.1) WILD-TYPE 
                        17.49                         15.02 
[1] "0.8 - 41.8 (17.5)" "0.3 - 66.1 (15.0)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "AMP PEAK 14(XP21.1) MUTATED" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
  "AMP PEAK 14(XP21.1) MUTATED" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 14(XP21.1) WILD-TYPE"   "AMP PEAK 14(XP21.1) MUTATED" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 14(XP21.1) WILD-TYPE"   "AMP PEAK 14(XP21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
  "AMP PEAK 14(XP21.1) MUTATED" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "AMP PEAK 14(XP21.1) MUTATED" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
  "AMP PEAK 14(XP21.1) MUTATED" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 14(XP21.1) WILD-TYPE"   "AMP PEAK 14(XP21.1) MUTATED" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 14(XP21.1) WILD-TYPE"   "AMP PEAK 14(XP21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
  "AMP PEAK 14(XP21.1) MUTATED" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "AMP PEAK 14(XP21.1) MUTATED" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
  "AMP PEAK 14(XP21.1) MUTATED" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 14(XP21.1) WILD-TYPE"   "AMP PEAK 14(XP21.1) MUTATED" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 14(XP21.1) WILD-TYPE"   "AMP PEAK 14(XP21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
  "AMP PEAK 14(XP21.1) MUTATED" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 14(XP21.1) WILD-TYPE" "AMP PEAK 14(XP21.1) WILD-TYPE" 
[1] "hr=" "1"  
D14V2, continuous
                               vv
clus                            T2 T3 T4
  AMP PEAK 14(XP21.1) MUTATED    1  4  0
  AMP PEAK 14(XP21.1) WILD-TYPE 68 81  5
D14V3, multiclass
    clus
vv   AMP PEAK 14(XP21.1) MUTATED AMP PEAK 14(XP21.1) WILD-TYPE
  T2                           1                            68
  T3                           4                            81
  T4                           0                             5
D14V4, binary
                               cls
clus                              0   1
  AMP PEAK 14(XP21.1) MUTATED     4   1
  AMP PEAK 14(XP21.1) WILD-TYPE 122  14
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 14(XP21.1) MUTATED      4    1
  AMP PEAK 14(XP21.1) WILD-TYPE  122   14
   clus
vv  AMP PEAK 14(XP21.1) MUTATED AMP PEAK 14(XP21.1) WILD-TYPE
  0                           4                           122
  1                           1                            14
                               vv
clus                             R0  R1  RX
  AMP PEAK 14(XP21.1) MUTATED     3   2   0
  AMP PEAK 14(XP21.1) WILD-TYPE 116  29   3
D14V5, multiclass
    clus
vv   AMP PEAK 14(XP21.1) MUTATED AMP PEAK 14(XP21.1) WILD-TYPE
  R0                           3                           116
  R1                           2                            29
  RX                           0                             3
D14V6, continuous

Clustering(15) Variable = AMP PEAK 15(XQ12) MUTATION ANALYSIS
D15V1, survival
                             sevent
clus2                           0   1
  AMP PEAK 15(XQ12) MUTATED     3   0
  AMP PEAK 15(XQ12) WILD-TYPE 156   1
  AMP PEAK 15(XQ12) MUTATED AMP PEAK 15(XQ12) WILD-TYPE 
                          3                         157 
  AMP PEAK 15(XQ12) MUTATED AMP PEAK 15(XQ12) WILD-TYPE 
                          0                           1 
$`AMP PEAK 15(XQ12) MUTATED`
TCGA-EJ-7789 TCGA-G9-6499 TCGA-HI-7169 
        2.30        36.46        64.08 

$`AMP PEAK 15(XQ12) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
       15.95        26.96         9.96        32.02        33.01         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 
       17.49        23.97         8.02        17.42         7.53        14.70 
TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 
       11.70         5.98        29.82        36.03        24.23        25.91 
TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 
       25.71        23.80        34.88        25.74        27.91        39.29 
TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 
       37.91        27.68        46.13        27.42        25.97        18.64 
TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 
       13.05        41.82        23.80        29.92        17.06        26.99 
TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 
       48.99        61.15         9.70         9.50         9.37         7.66 
TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 
        5.75         5.59         6.28         0.30         5.56         2.10 
TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 
        4.31         5.49         8.48         2.60         1.71         7.13 
TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 TCGA-EJ-8470 
       17.29         1.41         9.34         6.15        63.98        26.99 
TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 
       66.12         5.33         1.05        30.35        65.92        63.29 
TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 
       54.87        54.21        43.99        18.21        37.61        39.95 
TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 
       27.85        32.88        33.14        27.02        32.65        27.65 
TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 
       26.43         3.32        28.77        27.98        26.50        27.81 
TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 
       16.60        17.03        21.83        12.82        11.70        47.41 
TCGA-G9-6496 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 
       33.34        22.16        15.02        15.98        14.83        10.65 
TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 
       16.83         1.02         2.01        65.98         5.33         2.93 
TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7213 TCGA-HC-7230 
        2.01         1.02         0.99         1.02         1.97         1.68 
TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7742 TCGA-HC-7744 
        2.37         0.99         2.07         1.74         1.48         1.68 
TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 
        1.87         2.04         2.01         1.12         3.22         1.48 
TCGA-HC-7821 TCGA-HC-8265 TCGA-HC-A4ZV TCGA-HI-7168 TCGA-HI-7170 TCGA-HI-7171 
        1.84         2.04         0.76        65.92        62.43        66.02 
TCGA-J4-8198 
        3.22 

  AMP PEAK 15(XQ12) MUTATED AMP PEAK 15(XQ12) WILD-TYPE 
                        2.3                         0.3 
  AMP PEAK 15(XQ12) MUTATED AMP PEAK 15(XQ12) WILD-TYPE 
                      64.08                       66.12 
  AMP PEAK 15(XQ12) MUTATED AMP PEAK 15(XQ12) WILD-TYPE 
                      36.46                       15.02 
[1] "2.3 - 64.1 (36.5)" "0.3 - 66.1 (15.0)"
                 TCGA-CH-5737                  TCGA-CH-5738 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"AMP PEAK 15(XQ12) WILD-TYPE"   "AMP PEAK 15(XQ12) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-EJ-8469 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-8470                  TCGA-EJ-8472 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-A46B                  TCGA-FC-7708 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "AMP PEAK 15(XQ12) MUTATED" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7075                  TCGA-HC-7077 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7078                  TCGA-HC-7079 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7080                  TCGA-HC-7209 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7212 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7213                  TCGA-HC-7230 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7231                  TCGA-HC-7736 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7737                  TCGA-HC-7740 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7742                  TCGA-HC-7744 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7748 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7749                  TCGA-HC-7750 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7752                  TCGA-HC-7818 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7821                  TCGA-HC-8265 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-A4ZV                  TCGA-HI-7168 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HI-7169                  TCGA-HI-7170 
  "AMP PEAK 15(XQ12) MUTATED" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5737                  TCGA-CH-5738 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"AMP PEAK 15(XQ12) WILD-TYPE"   "AMP PEAK 15(XQ12) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-EJ-8469 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-8470                  TCGA-EJ-8472 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-A46B                  TCGA-FC-7708 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "AMP PEAK 15(XQ12) MUTATED" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7075                  TCGA-HC-7077 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7078                  TCGA-HC-7079 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7080                  TCGA-HC-7209 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7212 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7213                  TCGA-HC-7230 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7231                  TCGA-HC-7736 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7737                  TCGA-HC-7740 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7742                  TCGA-HC-7744 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7748 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7749                  TCGA-HC-7750 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7752                  TCGA-HC-7818 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7821                  TCGA-HC-8265 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-A4ZV                  TCGA-HI-7168 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HI-7169                  TCGA-HI-7170 
  "AMP PEAK 15(XQ12) MUTATED" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5737                  TCGA-CH-5738 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"AMP PEAK 15(XQ12) WILD-TYPE"   "AMP PEAK 15(XQ12) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-EJ-8469 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-8470                  TCGA-EJ-8472 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-EJ-A46B                  TCGA-FC-7708 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "AMP PEAK 15(XQ12) MUTATED" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7075                  TCGA-HC-7077 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7078                  TCGA-HC-7079 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7080                  TCGA-HC-7209 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7212 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7213                  TCGA-HC-7230 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7231                  TCGA-HC-7736 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7737                  TCGA-HC-7740 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7742                  TCGA-HC-7744 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7748 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7749                  TCGA-HC-7750 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7752                  TCGA-HC-7818 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-7821                  TCGA-HC-8265 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HC-A4ZV                  TCGA-HI-7168 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HI-7169                  TCGA-HI-7170 
  "AMP PEAK 15(XQ12) MUTATED" "AMP PEAK 15(XQ12) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"AMP PEAK 15(XQ12) WILD-TYPE" "AMP PEAK 15(XQ12) WILD-TYPE" 
[1] "hr=" "1"  
D15V2, continuous
                             vv
clus                          T2 T3 T4
  AMP PEAK 15(XQ12) MUTATED    0  3  0
  AMP PEAK 15(XQ12) WILD-TYPE 69 82  5
D15V3, multiclass
    clus
vv   AMP PEAK 15(XQ12) MUTATED AMP PEAK 15(XQ12) WILD-TYPE
  T2                         0                          69
  T3                         3                          82
  T4                         0                           5
D15V4, binary
                             cls
clus                            0   1
  AMP PEAK 15(XQ12) MUTATED     3   0
  AMP PEAK 15(XQ12) WILD-TYPE 123  15
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK 15(XQ12) MUTATED      3    0
  AMP PEAK 15(XQ12) WILD-TYPE  123   15
   clus
vv  AMP PEAK 15(XQ12) MUTATED AMP PEAK 15(XQ12) WILD-TYPE
  0                         3                         123
  1                         0                          15
                             vv
clus                           R0  R1  RX
  AMP PEAK 15(XQ12) MUTATED     2   1   0
  AMP PEAK 15(XQ12) WILD-TYPE 117  30   3
D15V5, multiclass
    clus
vv   AMP PEAK 15(XQ12) MUTATED AMP PEAK 15(XQ12) WILD-TYPE
  R0                         2                         117
  R1                         1                          30
  RX                         0                           3
D15V6, continuous

Clustering(16) Variable = AMP PEAK 16(XQ21.1) MUTATION ANALYSIS
D16V1, survival
                               sevent
clus2                             0   1
  AMP PEAK 16(XQ21.1) MUTATED     7   0
  AMP PEAK 16(XQ21.1) WILD-TYPE 152   1
  AMP PEAK 16(XQ21.1) MUTATED AMP PEAK 16(XQ21.1) WILD-TYPE 
                            7                           153 
  AMP PEAK 16(XQ21.1) MUTATED AMP PEAK 16(XQ21.1) WILD-TYPE 
                            0                             1 
$`AMP PEAK 16(XQ21.1) MUTATED`
TCGA-EJ-5505 TCGA-EJ-5507 TCGA-EJ-5521 TCGA-EJ-5530 TCGA-EJ-5542 TCGA-EJ-7789 
       14.70         5.98        27.68        41.82        17.06         2.30 
TCGA-G9-6499 
       36.46 

$`AMP PEAK 16(XQ21.1) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
       15.95        26.96         9.96        32.02        33.01         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5506 
       17.49        23.97         8.02        17.42         7.53        11.70 
TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 
       29.82        36.03        24.23        25.91        25.71        23.80 
TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5522 
       34.88        25.74        27.91        39.29        37.91        46.13 
TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5531 TCGA-EJ-5532 
       27.42        25.97        18.64        13.05        23.80        29.92 
TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 
       26.99        48.99        61.15         9.70         9.50         9.37 
TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 
        7.66         5.75         5.59         6.28         0.30         5.56 
TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 
        2.10         4.31         5.49         8.48         2.60         1.71 
TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 
        7.13        17.29         1.41         9.34         6.15        63.98 
TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 
       26.99        66.12         5.33         1.05        30.35        65.92 
TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 
       63.29        54.87        54.21        43.99        18.21        37.61 
TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 
       39.95        27.85        32.88        33.14        27.02        32.65 
TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 
       27.65        26.43         3.32        28.77        27.98        26.50 
TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 
       27.81        16.60        17.03        21.83        12.82        11.70 
TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 
       47.41        33.34        22.16        15.02        15.98        14.83 
TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 TCGA-HC-7078 
       10.65        16.83         1.02         2.01        65.98         5.33 
TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7213 
        2.93         2.01         1.02         0.99         1.02         1.97 
TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7742 
        1.68         2.37         0.99         2.07         1.74         1.48 
TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7752 
        1.68         1.87         2.04         2.01         1.12         3.22 
TCGA-HC-7818 TCGA-HC-7821 TCGA-HC-8265 TCGA-HC-A4ZV TCGA-HI-7168 TCGA-HI-7169 
        1.48         1.84         2.04         0.76        65.92        64.08 
TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       62.43        66.02         3.22 

  AMP PEAK 16(XQ21.1) MUTATED AMP PEAK 16(XQ21.1) WILD-TYPE 
                          2.3                           0.3 
  AMP PEAK 16(XQ21.1) MUTATED AMP PEAK 16(XQ21.1) WILD-TYPE 
                        41.82                         66.12 
  AMP PEAK 16(XQ21.1) MUTATED AMP PEAK 16(XQ21.1) WILD-TYPE 
                        17.06                         15.02 
[1] "2.3 - 41.8 (17.1)" "0.3 - 66.1 (15.0)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 16(XQ21.1) WILD-TYPE"   "AMP PEAK 16(XQ21.1) MUTATED" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 16(XQ21.1) WILD-TYPE"   "AMP PEAK 16(XQ21.1) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK 16(XQ21.1) WILD-TYPE"   "AMP PEAK 16(XQ21.1) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 16(XQ21.1) WILD-TYPE"   "AMP PEAK 16(XQ21.1) MUTATED" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "AMP PEAK 16(XQ21.1) MUTATED" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 16(XQ21.1) WILD-TYPE"   "AMP PEAK 16(XQ21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK 16(XQ21.1) MUTATED" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 16(XQ21.1) WILD-TYPE"   "AMP PEAK 16(XQ21.1) MUTATED" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 16(XQ21.1) WILD-TYPE"   "AMP PEAK 16(XQ21.1) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK 16(XQ21.1) WILD-TYPE"   "AMP PEAK 16(XQ21.1) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 16(XQ21.1) WILD-TYPE"   "AMP PEAK 16(XQ21.1) MUTATED" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "AMP PEAK 16(XQ21.1) MUTATED" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 16(XQ21.1) WILD-TYPE"   "AMP PEAK 16(XQ21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK 16(XQ21.1) MUTATED" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 16(XQ21.1) WILD-TYPE"   "AMP PEAK 16(XQ21.1) MUTATED" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 16(XQ21.1) WILD-TYPE"   "AMP PEAK 16(XQ21.1) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK 16(XQ21.1) WILD-TYPE"   "AMP PEAK 16(XQ21.1) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 16(XQ21.1) WILD-TYPE"   "AMP PEAK 16(XQ21.1) MUTATED" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "AMP PEAK 16(XQ21.1) MUTATED" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 16(XQ21.1) WILD-TYPE"   "AMP PEAK 16(XQ21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK 16(XQ21.1) MUTATED" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 16(XQ21.1) WILD-TYPE" "AMP PEAK 16(XQ21.1) WILD-TYPE" 
[1] "hr=" "1"  
D16V2, continuous
                               vv
clus                            T2 T3 T4
  AMP PEAK 16(XQ21.1) MUTATED    2  5  0
  AMP PEAK 16(XQ21.1) WILD-TYPE 67 80  5
D16V3, multiclass
    clus
vv   AMP PEAK 16(XQ21.1) MUTATED AMP PEAK 16(XQ21.1) WILD-TYPE
  T2                           2                            67
  T3                           5                            80
  T4                           0                             5
D16V4, binary
                               cls
clus                              0   1
  AMP PEAK 16(XQ21.1) MUTATED     6   1
  AMP PEAK 16(XQ21.1) WILD-TYPE 120  14
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 16(XQ21.1) MUTATED      6    1
  AMP PEAK 16(XQ21.1) WILD-TYPE  120   14
   clus
vv  AMP PEAK 16(XQ21.1) MUTATED AMP PEAK 16(XQ21.1) WILD-TYPE
  0                           6                           120
  1                           1                            14
                               vv
clus                             R0  R1  RX
  AMP PEAK 16(XQ21.1) MUTATED     7   0   0
  AMP PEAK 16(XQ21.1) WILD-TYPE 112  31   3
D16V5, multiclass
    clus
vv   AMP PEAK 16(XQ21.1) MUTATED AMP PEAK 16(XQ21.1) WILD-TYPE
  R0                           7                           112
  R1                           0                            31
  RX                           0                             3
D16V6, continuous

Clustering(17) Variable = AMP PEAK 17(XQ21.1) MUTATION ANALYSIS
D17V1, survival
                               sevent
clus2                             0   1
  AMP PEAK 17(XQ21.1) MUTATED     5   0
  AMP PEAK 17(XQ21.1) WILD-TYPE 154   1
  AMP PEAK 17(XQ21.1) MUTATED AMP PEAK 17(XQ21.1) WILD-TYPE 
                            5                           155 
  AMP PEAK 17(XQ21.1) MUTATED AMP PEAK 17(XQ21.1) WILD-TYPE 
                            0                             1 
$`AMP PEAK 17(XQ21.1) MUTATED`
TCGA-EJ-5519 TCGA-EJ-5531 TCGA-EJ-7789 TCGA-G9-6499 TCGA-HC-7737 
       37.91        23.80         2.30        36.46         2.07 

$`AMP PEAK 17(XQ21.1) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
       15.95        26.96         9.96        32.02        33.01         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 
       17.49        23.97         8.02        17.42         7.53        14.70 
TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 
       11.70         5.98        29.82        36.03        24.23        25.91 
TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 
       25.71        23.80        34.88        25.74        27.91        39.29 
TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 
       27.68        46.13        27.42        25.97        18.64        13.05 
TCGA-EJ-5530 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 
       41.82        29.92        17.06        26.99        48.99        61.15 
TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 
        9.70         9.50         9.37         7.66         5.75         5.59 
TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 
        6.28         0.30         5.56         2.10         4.31         5.49 
TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 
        8.48         2.60         1.71         7.13        17.29         1.41 
TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B 
        9.34         6.15        63.98        26.99        66.12         5.33 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 
        1.05        30.35        65.92        63.29        54.87        54.21 
TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 
       43.99        18.21        37.61        39.95        27.85        32.88 
TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 
       33.14        27.02        32.65        27.65        26.43         3.32 
TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 
       28.77        27.98        26.50        27.81        16.60        17.03 
TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 
       21.83        12.82        11.70        47.41        33.34        22.16 
TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 
       15.02        15.98        14.83        10.65        16.83         1.02 
TCGA-HC-7075 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 
        2.01        65.98         5.33         2.93         2.01         1.02 
TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 
        0.99         1.02         1.97         1.68         2.37         0.99 
TCGA-HC-7740 TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7749 
        1.74         1.48         1.68         1.87         2.04         2.01 
TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-7821 TCGA-HC-8265 TCGA-HC-A4ZV 
        1.12         3.22         1.48         1.84         2.04         0.76 
TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       65.92        64.08        62.43        66.02         3.22 

  AMP PEAK 17(XQ21.1) MUTATED AMP PEAK 17(XQ21.1) WILD-TYPE 
                         2.07                          0.30 
  AMP PEAK 17(XQ21.1) MUTATED AMP PEAK 17(XQ21.1) WILD-TYPE 
                        37.91                         66.12 
  AMP PEAK 17(XQ21.1) MUTATED AMP PEAK 17(XQ21.1) WILD-TYPE 
                        23.80                         15.02 
[1] "2.1 - 37.9 (23.8)" "0.3 - 66.1 (15.0)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "AMP PEAK 17(XQ21.1) MUTATED" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "AMP PEAK 17(XQ21.1) MUTATED" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 17(XQ21.1) WILD-TYPE"   "AMP PEAK 17(XQ21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK 17(XQ21.1) MUTATED" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
  "AMP PEAK 17(XQ21.1) MUTATED" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "AMP PEAK 17(XQ21.1) MUTATED" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "AMP PEAK 17(XQ21.1) MUTATED" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 17(XQ21.1) WILD-TYPE"   "AMP PEAK 17(XQ21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK 17(XQ21.1) MUTATED" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
  "AMP PEAK 17(XQ21.1) MUTATED" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "AMP PEAK 17(XQ21.1) MUTATED" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "AMP PEAK 17(XQ21.1) MUTATED" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 17(XQ21.1) WILD-TYPE"   "AMP PEAK 17(XQ21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK 17(XQ21.1) MUTATED" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
  "AMP PEAK 17(XQ21.1) MUTATED" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 17(XQ21.1) WILD-TYPE" "AMP PEAK 17(XQ21.1) WILD-TYPE" 
[1] "hr=" "1"  
D17V2, continuous
                               vv
clus                            T2 T3 T4
  AMP PEAK 17(XQ21.1) MUTATED    1  4  0
  AMP PEAK 17(XQ21.1) WILD-TYPE 68 81  5
D17V3, multiclass
    clus
vv   AMP PEAK 17(XQ21.1) MUTATED AMP PEAK 17(XQ21.1) WILD-TYPE
  T2                           1                            68
  T3                           4                            81
  T4                           0                             5
D17V4, binary
                               cls
clus                              0   1
  AMP PEAK 17(XQ21.1) MUTATED     3   2
  AMP PEAK 17(XQ21.1) WILD-TYPE 123  13
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 17(XQ21.1) MUTATED      3    2
  AMP PEAK 17(XQ21.1) WILD-TYPE  123   13
   clus
vv  AMP PEAK 17(XQ21.1) MUTATED AMP PEAK 17(XQ21.1) WILD-TYPE
  0                           3                           123
  1                           2                            13
                               vv
clus                             R0  R1  RX
  AMP PEAK 17(XQ21.1) MUTATED     5   0   0
  AMP PEAK 17(XQ21.1) WILD-TYPE 114  31   3
D17V5, multiclass
    clus
vv   AMP PEAK 17(XQ21.1) MUTATED AMP PEAK 17(XQ21.1) WILD-TYPE
  R0                           5                           114
  R1                           0                            31
  RX                           0                             3
D17V6, continuous

Clustering(18) Variable = AMP PEAK 18(XQ21.31) MUTATION ANALYSIS
D18V1, survival
                                sevent
clus2                              0   1
  AMP PEAK 18(XQ21.31) MUTATED     5   0
  AMP PEAK 18(XQ21.31) WILD-TYPE 154   1
  AMP PEAK 18(XQ21.31) MUTATED AMP PEAK 18(XQ21.31) WILD-TYPE 
                             5                            155 
  AMP PEAK 18(XQ21.31) MUTATED AMP PEAK 18(XQ21.31) WILD-TYPE 
                             0                              1 
$`AMP PEAK 18(XQ21.31) MUTATED`
TCGA-EJ-5517 TCGA-EJ-5521 TCGA-EJ-5525 TCGA-EJ-7789 TCGA-G9-6499 
       27.91        27.68        25.97         2.30        36.46 

$`AMP PEAK 18(XQ21.31) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
       15.95        26.96         9.96        32.02        33.01         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 
       17.49        23.97         8.02        17.42         7.53        14.70 
TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 
       11.70         5.98        29.82        36.03        24.23        25.91 
TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5518 TCGA-EJ-5519 
       25.71        23.80        34.88        25.74        39.29        37.91 
TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 
       46.13        27.42        18.64        13.05        41.82        23.80 
TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 
       29.92        17.06        26.99        48.99        61.15         9.70 
TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 
        9.50         9.37         7.66         5.75         5.59         6.28 
TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 
        0.30         5.56         2.10         4.31         5.49         8.48 
TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 
        2.60         1.71         7.13        17.29         1.41         9.34 
TCGA-EJ-7797 TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 
        6.15        63.98        26.99        66.12         5.33         1.05 
TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 
       30.35        65.92        63.29        54.87        54.21        43.99 
TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 
       18.21        37.61        39.95        27.85        32.88        33.14 
TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 
       27.02        32.65        27.65        26.43         3.32        28.77 
TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 
       27.98        26.50        27.81        16.60        17.03        21.83 
TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 TCGA-G9-7519 
       12.82        11.70        47.41        33.34        22.16        15.02 
TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 
       15.98        14.83        10.65        16.83         1.02         2.01 
TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7211 
       65.98         5.33         2.93         2.01         1.02         0.99 
TCGA-HC-7212 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 
        1.02         1.97         1.68         2.37         0.99         2.07 
TCGA-HC-7740 TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7749 
        1.74         1.48         1.68         1.87         2.04         2.01 
TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-7821 TCGA-HC-8265 TCGA-HC-A4ZV 
        1.12         3.22         1.48         1.84         2.04         0.76 
TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       65.92        64.08        62.43        66.02         3.22 

  AMP PEAK 18(XQ21.31) MUTATED AMP PEAK 18(XQ21.31) WILD-TYPE 
                           2.3                            0.3 
  AMP PEAK 18(XQ21.31) MUTATED AMP PEAK 18(XQ21.31) WILD-TYPE 
                         36.46                          66.12 
  AMP PEAK 18(XQ21.31) MUTATED AMP PEAK 18(XQ21.31) WILD-TYPE 
                         27.68                          14.83 
[1] "2.3 - 36.5 (27.7)" "0.3 - 66.1 (14.8)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "AMP PEAK 18(XQ21.31) MUTATED" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK 18(XQ21.31) WILD-TYPE"   "AMP PEAK 18(XQ21.31) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "AMP PEAK 18(XQ21.31) MUTATED" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK 18(XQ21.31) WILD-TYPE"   "AMP PEAK 18(XQ21.31) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "AMP PEAK 18(XQ21.31) MUTATED" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "AMP PEAK 18(XQ21.31) MUTATED" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK 18(XQ21.31) WILD-TYPE"   "AMP PEAK 18(XQ21.31) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "AMP PEAK 18(XQ21.31) MUTATED" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK 18(XQ21.31) WILD-TYPE"   "AMP PEAK 18(XQ21.31) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "AMP PEAK 18(XQ21.31) MUTATED" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "AMP PEAK 18(XQ21.31) MUTATED" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"AMP PEAK 18(XQ21.31) WILD-TYPE"   "AMP PEAK 18(XQ21.31) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "AMP PEAK 18(XQ21.31) MUTATED" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"AMP PEAK 18(XQ21.31) WILD-TYPE"   "AMP PEAK 18(XQ21.31) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "AMP PEAK 18(XQ21.31) MUTATED" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"AMP PEAK 18(XQ21.31) WILD-TYPE" "AMP PEAK 18(XQ21.31) WILD-TYPE" 
[1] "hr=" "1"  
D18V2, continuous
                                vv
clus                             T2 T3 T4
  AMP PEAK 18(XQ21.31) MUTATED    2  3  0
  AMP PEAK 18(XQ21.31) WILD-TYPE 67 82  5
D18V3, multiclass
    clus
vv   AMP PEAK 18(XQ21.31) MUTATED AMP PEAK 18(XQ21.31) WILD-TYPE
  T2                            2                             67
  T3                            3                             82
  T4                            0                              5
D18V4, binary
                                cls
clus                               0   1
  AMP PEAK 18(XQ21.31) MUTATED     5   0
  AMP PEAK 18(XQ21.31) WILD-TYPE 121  15
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 18(XQ21.31) MUTATED      5    0
  AMP PEAK 18(XQ21.31) WILD-TYPE  121   15
   clus
vv  AMP PEAK 18(XQ21.31) MUTATED AMP PEAK 18(XQ21.31) WILD-TYPE
  0                            5                            121
  1                            0                             15
                                vv
clus                              R0  R1  RX
  AMP PEAK 18(XQ21.31) MUTATED     5   0   0
  AMP PEAK 18(XQ21.31) WILD-TYPE 114  31   3
D18V5, multiclass
    clus
vv   AMP PEAK 18(XQ21.31) MUTATED AMP PEAK 18(XQ21.31) WILD-TYPE
  R0                            5                            114
  R1                            0                             31
  RX                            0                              3
D18V6, continuous

Clustering(19) Variable = AMP PEAK 19(XQ25) MUTATION ANALYSIS
D19V1, survival
                             sevent
clus2                           0   1
  AMP PEAK 19(XQ25) MUTATED     3   0
  AMP PEAK 19(XQ25) WILD-TYPE 156   1
  AMP PEAK 19(XQ25) MUTATED AMP PEAK 19(XQ25) WILD-TYPE 
                          3                         157 
  AMP PEAK 19(XQ25) MUTATED AMP PEAK 19(XQ25) WILD-TYPE 
                          0                           1 
$`AMP PEAK 19(XQ25) MUTATED`
TCGA-EJ-7781 TCGA-EJ-7789 TCGA-G9-6499 
        5.56         2.30        36.46 

$`AMP PEAK 19(XQ25) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
       15.95        26.96         9.96        32.02        33.01         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 
       17.49        23.97         8.02        17.42         7.53        14.70 
TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 
       11.70         5.98        29.82        36.03        24.23        25.91 
TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 
       25.71        23.80        34.88        25.74        27.91        39.29 
TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 
       37.91        27.68        46.13        27.42        25.97        18.64 
TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 
       13.05        41.82        23.80        29.92        17.06        26.99 
TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 
       48.99        61.15         9.70         9.50         9.37         7.66 
TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7782 TCGA-EJ-7783 
        5.75         5.59         6.28         0.30         2.10         4.31 
TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 
        5.49         8.48         2.60         1.71         7.13        17.29 
TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-8472 
        1.41         9.34         6.15        63.98        26.99        66.12 
TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 
        5.33         1.05        30.35        65.92        63.29        54.87 
TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 
       54.21        43.99        18.21        37.61        39.95        27.85 
TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 
       32.88        33.14        27.02        32.65        27.65        26.43 
TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 
        3.32        28.77        27.98        26.50        27.81        16.60 
TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 
       17.03        21.83        12.82        11.70        47.41        33.34 
TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 
       22.16        15.02        15.98        14.83        10.65        16.83 
TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 
        1.02         2.01        65.98         5.33         2.93         2.01 
TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 
        1.02         0.99         1.02         1.97         1.68         2.37 
TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 
        0.99         2.07         1.74         1.48         1.68         1.87 
TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-7821 
        2.04         2.01         1.12         3.22         1.48         1.84 
TCGA-HC-8265 TCGA-HC-A4ZV TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 
        2.04         0.76        65.92        64.08        62.43        66.02 
TCGA-J4-8198 
        3.22 

  AMP PEAK 19(XQ25) MUTATED AMP PEAK 19(XQ25) WILD-TYPE 
                        2.3                         0.3 
  AMP PEAK 19(XQ25) MUTATED AMP PEAK 19(XQ25) WILD-TYPE 
                      36.46                       66.12 
  AMP PEAK 19(XQ25) MUTATED AMP PEAK 19(XQ25) WILD-TYPE 
                       5.56                       15.06 
[1] "2.3 - 36.5 (5.6)"  "0.3 - 66.1 (15.1)"
                 TCGA-CH-5737                  TCGA-CH-5738 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
  "AMP PEAK 19(XQ25) MUTATED" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"AMP PEAK 19(XQ25) WILD-TYPE"   "AMP PEAK 19(XQ25) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-EJ-8469 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-8470                  TCGA-EJ-8472 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-A46B                  TCGA-FC-7708 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "AMP PEAK 19(XQ25) MUTATED" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7075                  TCGA-HC-7077 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7078                  TCGA-HC-7079 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7080                  TCGA-HC-7209 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7212 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7213                  TCGA-HC-7230 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7231                  TCGA-HC-7736 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7737                  TCGA-HC-7740 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7742                  TCGA-HC-7744 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7748 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7749                  TCGA-HC-7750 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7752                  TCGA-HC-7818 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7821                  TCGA-HC-8265 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-A4ZV                  TCGA-HI-7168 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5737                  TCGA-CH-5738 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
  "AMP PEAK 19(XQ25) MUTATED" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"AMP PEAK 19(XQ25) WILD-TYPE"   "AMP PEAK 19(XQ25) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-EJ-8469 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-8470                  TCGA-EJ-8472 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-A46B                  TCGA-FC-7708 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "AMP PEAK 19(XQ25) MUTATED" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7075                  TCGA-HC-7077 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7078                  TCGA-HC-7079 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7080                  TCGA-HC-7209 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7212 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7213                  TCGA-HC-7230 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7231                  TCGA-HC-7736 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7737                  TCGA-HC-7740 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7742                  TCGA-HC-7744 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7748 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7749                  TCGA-HC-7750 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7752                  TCGA-HC-7818 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7821                  TCGA-HC-8265 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-A4ZV                  TCGA-HI-7168 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5737                  TCGA-CH-5738 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
  "AMP PEAK 19(XQ25) MUTATED" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"AMP PEAK 19(XQ25) WILD-TYPE"   "AMP PEAK 19(XQ25) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-EJ-8469 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-8470                  TCGA-EJ-8472 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-EJ-A46B                  TCGA-FC-7708 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "AMP PEAK 19(XQ25) MUTATED" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7075                  TCGA-HC-7077 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7078                  TCGA-HC-7079 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7080                  TCGA-HC-7209 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7212 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7213                  TCGA-HC-7230 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7231                  TCGA-HC-7736 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7737                  TCGA-HC-7740 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7742                  TCGA-HC-7744 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7748 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7749                  TCGA-HC-7750 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7752                  TCGA-HC-7818 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-7821                  TCGA-HC-8265 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HC-A4ZV                  TCGA-HI-7168 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"AMP PEAK 19(XQ25) WILD-TYPE" "AMP PEAK 19(XQ25) WILD-TYPE" 
[1] "hr=" "1"  
D19V2, continuous
                             vv
clus                          T2 T3 T4
  AMP PEAK 19(XQ25) MUTATED    1  2  0
  AMP PEAK 19(XQ25) WILD-TYPE 68 83  5
D19V3, multiclass
    clus
vv   AMP PEAK 19(XQ25) MUTATED AMP PEAK 19(XQ25) WILD-TYPE
  T2                         1                          68
  T3                         2                          83
  T4                         0                           5
D19V4, binary
                             cls
clus                            0   1
  AMP PEAK 19(XQ25) MUTATED     3   0
  AMP PEAK 19(XQ25) WILD-TYPE 123  15
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK 19(XQ25) MUTATED      3    0
  AMP PEAK 19(XQ25) WILD-TYPE  123   15
   clus
vv  AMP PEAK 19(XQ25) MUTATED AMP PEAK 19(XQ25) WILD-TYPE
  0                         3                         123
  1                         0                          15
                             vv
clus                           R0  R1  RX
  AMP PEAK 19(XQ25) MUTATED     3   0   0
  AMP PEAK 19(XQ25) WILD-TYPE 116  31   3
D19V5, multiclass
    clus
vv   AMP PEAK 19(XQ25) MUTATED AMP PEAK 19(XQ25) WILD-TYPE
  R0                         3                         116
  R1                         0                          31
  RX                         0                           3
D19V6, continuous

Clustering(20) Variable = AMP PEAK 20(XQ25) MUTATION ANALYSIS
D20V1, survival
                             sevent
clus2                           0   1
  AMP PEAK 20(XQ25) MUTATED     6   0
  AMP PEAK 20(XQ25) WILD-TYPE 153   1
  AMP PEAK 20(XQ25) MUTATED AMP PEAK 20(XQ25) WILD-TYPE 
                          6                         154 
  AMP PEAK 20(XQ25) MUTATED AMP PEAK 20(XQ25) WILD-TYPE 
                          0                           1 
$`AMP PEAK 20(XQ25) MUTATED`
TCGA-EJ-5499 TCGA-EJ-5505 TCGA-EJ-5522 TCGA-EJ-5526 TCGA-EJ-7789 TCGA-G9-6499 
       17.49        14.70        46.13        18.64         2.30        36.46 

$`AMP PEAK 20(XQ25) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
       15.95        26.96         9.96        32.02        33.01         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5506 TCGA-EJ-5507 
       23.97         8.02        17.42         7.53        11.70         5.98 
TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 
       29.82        36.03        24.23        25.91        25.71        23.80 
TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5521 
       34.88        25.74        27.91        39.29        37.91        27.68 
TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 
       27.42        25.97        13.05        41.82        23.80        29.92 
TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 
       17.06        26.99        48.99        61.15         9.70         9.50 
TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 
        9.37         7.66         5.75         5.59         6.28         0.30 
TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 
        5.56         2.10         4.31         5.49         8.48         2.60 
TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 
        1.71         7.13        17.29         1.41         9.34         6.15 
TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6329 
       63.98        26.99        66.12         5.33         1.05        30.35 
TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 
       65.92        63.29        54.87        54.21        43.99        18.21 
TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 
       37.61        39.95        27.85        32.88        33.14        27.02 
TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 
       32.65        27.65        26.43         3.32        28.77        27.98 
TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 
       26.50        27.81        16.60        17.03        21.83        12.82 
TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 
       11.70        47.41        33.34        22.16        15.02        15.98 
TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 
       14.83        10.65        16.83         1.02         2.01        65.98 
TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 
        5.33         2.93         2.01         1.02         0.99         1.02 
TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 
        1.97         1.68         2.37         0.99         2.07         1.74 
TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7750 
        1.48         1.68         1.87         2.04         2.01         1.12 
TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-7821 TCGA-HC-8265 TCGA-HC-A4ZV TCGA-HI-7168 
        3.22         1.48         1.84         2.04         0.76        65.92 
TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       64.08        62.43        66.02         3.22 

  AMP PEAK 20(XQ25) MUTATED AMP PEAK 20(XQ25) WILD-TYPE 
                        2.3                         0.3 
  AMP PEAK 20(XQ25) MUTATED AMP PEAK 20(XQ25) WILD-TYPE 
                      46.13                       66.12 
  AMP PEAK 20(XQ25) MUTATED AMP PEAK 20(XQ25) WILD-TYPE 
                     18.065                      14.925 
[1] "2.3 - 46.1 (18.1)" "0.3 - 66.1 (14.9)"
                 TCGA-CH-5737                  TCGA-CH-5738 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
  "AMP PEAK 20(XQ25) MUTATED" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"AMP PEAK 20(XQ25) WILD-TYPE"   "AMP PEAK 20(XQ25) MUTATED" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
  "AMP PEAK 20(XQ25) MUTATED" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"AMP PEAK 20(XQ25) WILD-TYPE"   "AMP PEAK 20(XQ25) MUTATED" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"AMP PEAK 20(XQ25) WILD-TYPE"   "AMP PEAK 20(XQ25) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-EJ-8469 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-8470                  TCGA-EJ-8472 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-A46B                  TCGA-FC-7708 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "AMP PEAK 20(XQ25) MUTATED" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7075                  TCGA-HC-7077 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7078                  TCGA-HC-7079 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7080                  TCGA-HC-7209 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7212 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7213                  TCGA-HC-7230 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7231                  TCGA-HC-7736 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7737                  TCGA-HC-7740 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7742                  TCGA-HC-7744 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7748 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7749                  TCGA-HC-7750 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7752                  TCGA-HC-7818 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7821                  TCGA-HC-8265 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-A4ZV                  TCGA-HI-7168 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5737                  TCGA-CH-5738 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
  "AMP PEAK 20(XQ25) MUTATED" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"AMP PEAK 20(XQ25) WILD-TYPE"   "AMP PEAK 20(XQ25) MUTATED" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
  "AMP PEAK 20(XQ25) MUTATED" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"AMP PEAK 20(XQ25) WILD-TYPE"   "AMP PEAK 20(XQ25) MUTATED" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"AMP PEAK 20(XQ25) WILD-TYPE"   "AMP PEAK 20(XQ25) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-EJ-8469 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-8470                  TCGA-EJ-8472 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-A46B                  TCGA-FC-7708 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "AMP PEAK 20(XQ25) MUTATED" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7075                  TCGA-HC-7077 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7078                  TCGA-HC-7079 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7080                  TCGA-HC-7209 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7212 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7213                  TCGA-HC-7230 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7231                  TCGA-HC-7736 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7737                  TCGA-HC-7740 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7742                  TCGA-HC-7744 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7748 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7749                  TCGA-HC-7750 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7752                  TCGA-HC-7818 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7821                  TCGA-HC-8265 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-A4ZV                  TCGA-HI-7168 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5737                  TCGA-CH-5738 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
  "AMP PEAK 20(XQ25) MUTATED" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"AMP PEAK 20(XQ25) WILD-TYPE"   "AMP PEAK 20(XQ25) MUTATED" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
  "AMP PEAK 20(XQ25) MUTATED" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"AMP PEAK 20(XQ25) WILD-TYPE"   "AMP PEAK 20(XQ25) MUTATED" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"AMP PEAK 20(XQ25) WILD-TYPE"   "AMP PEAK 20(XQ25) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-EJ-8469 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-8470                  TCGA-EJ-8472 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-EJ-A46B                  TCGA-FC-7708 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "AMP PEAK 20(XQ25) MUTATED" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7075                  TCGA-HC-7077 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7078                  TCGA-HC-7079 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7080                  TCGA-HC-7209 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7212 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7213                  TCGA-HC-7230 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7231                  TCGA-HC-7736 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7737                  TCGA-HC-7740 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7742                  TCGA-HC-7744 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7748 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7749                  TCGA-HC-7750 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7752                  TCGA-HC-7818 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-7821                  TCGA-HC-8265 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HC-A4ZV                  TCGA-HI-7168 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"AMP PEAK 20(XQ25) WILD-TYPE" "AMP PEAK 20(XQ25) WILD-TYPE" 
[1] "hr=" "1"  
D20V2, continuous
                             vv
clus                          T2 T3 T4
  AMP PEAK 20(XQ25) MUTATED    2  4  0
  AMP PEAK 20(XQ25) WILD-TYPE 67 81  5
D20V3, multiclass
    clus
vv   AMP PEAK 20(XQ25) MUTATED AMP PEAK 20(XQ25) WILD-TYPE
  T2                         2                          67
  T3                         4                          81
  T4                         0                           5
D20V4, binary
                             cls
clus                            0   1
  AMP PEAK 20(XQ25) MUTATED     5   1
  AMP PEAK 20(XQ25) WILD-TYPE 121  14
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK 20(XQ25) MUTATED      5    1
  AMP PEAK 20(XQ25) WILD-TYPE  121   14
   clus
vv  AMP PEAK 20(XQ25) MUTATED AMP PEAK 20(XQ25) WILD-TYPE
  0                         5                         121
  1                         1                          14
                             vv
clus                           R0  R1  RX
  AMP PEAK 20(XQ25) MUTATED     6   0   0
  AMP PEAK 20(XQ25) WILD-TYPE 113  31   3
D20V5, multiclass
    clus
vv   AMP PEAK 20(XQ25) MUTATED AMP PEAK 20(XQ25) WILD-TYPE
  R0                         6                         113
  R1                         0                          31
  RX                         0                           3
D20V6, continuous

Clustering(21) Variable = AMP PEAK 21(XQ27.1) MUTATION ANALYSIS
D21V1, survival
                               sevent
clus2                             0   1
  AMP PEAK 21(XQ27.1) MUTATED     9   0
  AMP PEAK 21(XQ27.1) WILD-TYPE 150   1
  AMP PEAK 21(XQ27.1) MUTATED AMP PEAK 21(XQ27.1) WILD-TYPE 
                            9                           151 
  AMP PEAK 21(XQ27.1) MUTATED AMP PEAK 21(XQ27.1) WILD-TYPE 
                            0                             1 
$`AMP PEAK 21(XQ27.1) MUTATED`
TCGA-EJ-7331 TCGA-EJ-7783 TCGA-EJ-7789 TCGA-EJ-7792 TCGA-EJ-7794 TCGA-G9-6499 
        0.30         4.31         2.30        17.29         9.34        36.46 
TCGA-H9-7775 TCGA-HC-7744 TCGA-HC-7749 
        1.02         1.68         2.01 

$`AMP PEAK 21(XQ27.1) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
       15.95        26.96         9.96        32.02        33.01         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 
       17.49        23.97         8.02        17.42         7.53        14.70 
TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 
       11.70         5.98        29.82        36.03        24.23        25.91 
TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 
       25.71        23.80        34.88        25.74        27.91        39.29 
TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 
       37.91        27.68        46.13        27.42        25.97        18.64 
TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 
       13.05        41.82        23.80        29.92        17.06        26.99 
TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 
       48.99        61.15         9.70         9.50         9.37         7.66 
TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7784 
        5.75         5.59         6.28         5.56         2.10         5.49 
TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7793 TCGA-EJ-7797 
        8.48         2.60         1.71         7.13         1.41         6.15 
TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6329 
       63.98        26.99        66.12         5.33         1.05        30.35 
TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 
       65.92        63.29        54.87        54.21        43.99        18.21 
TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 
       37.61        39.95        27.85        32.88        33.14        27.02 
TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 
       32.65        27.65        26.43         3.32        28.77        27.98 
TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 
       26.50        27.81        16.60        17.03        21.83        12.82 
TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 
       11.70        47.41        33.34        22.16        15.02        15.98 
TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-HC-7075 TCGA-HC-7077 TCGA-HC-7078 
       14.83        10.65        16.83         2.01        65.98         5.33 
TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7213 
        2.93         2.01         1.02         0.99         1.02         1.97 
TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7742 
        1.68         2.37         0.99         2.07         1.74         1.48 
TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-7821 
        1.87         2.04         1.12         3.22         1.48         1.84 
TCGA-HC-8265 TCGA-HC-A4ZV TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 
        2.04         0.76        65.92        64.08        62.43        66.02 
TCGA-J4-8198 
        3.22 

  AMP PEAK 21(XQ27.1) MUTATED AMP PEAK 21(XQ27.1) WILD-TYPE 
                         0.30                          0.76 
  AMP PEAK 21(XQ27.1) MUTATED AMP PEAK 21(XQ27.1) WILD-TYPE 
                        36.46                         66.12 
  AMP PEAK 21(XQ27.1) MUTATED AMP PEAK 21(XQ27.1) WILD-TYPE 
                         2.30                         15.98 
[1] "0.3 - 36.5 (2.3)"  "0.8 - 66.1 (16.0)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 21(XQ27.1) WILD-TYPE"   "AMP PEAK 21(XQ27.1) MUTATED" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
  "AMP PEAK 21(XQ27.1) MUTATED" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 21(XQ27.1) WILD-TYPE"   "AMP PEAK 21(XQ27.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 21(XQ27.1) WILD-TYPE"   "AMP PEAK 21(XQ27.1) MUTATED" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 21(XQ27.1) WILD-TYPE"   "AMP PEAK 21(XQ27.1) MUTATED" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK 21(XQ27.1) MUTATED" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 21(XQ27.1) WILD-TYPE"   "AMP PEAK 21(XQ27.1) MUTATED" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"AMP PEAK 21(XQ27.1) WILD-TYPE"   "AMP PEAK 21(XQ27.1) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
  "AMP PEAK 21(XQ27.1) MUTATED" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 21(XQ27.1) WILD-TYPE"   "AMP PEAK 21(XQ27.1) MUTATED" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
  "AMP PEAK 21(XQ27.1) MUTATED" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 21(XQ27.1) WILD-TYPE"   "AMP PEAK 21(XQ27.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 21(XQ27.1) WILD-TYPE"   "AMP PEAK 21(XQ27.1) MUTATED" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 21(XQ27.1) WILD-TYPE"   "AMP PEAK 21(XQ27.1) MUTATED" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK 21(XQ27.1) MUTATED" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 21(XQ27.1) WILD-TYPE"   "AMP PEAK 21(XQ27.1) MUTATED" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"AMP PEAK 21(XQ27.1) WILD-TYPE"   "AMP PEAK 21(XQ27.1) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
  "AMP PEAK 21(XQ27.1) MUTATED" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"AMP PEAK 21(XQ27.1) WILD-TYPE"   "AMP PEAK 21(XQ27.1) MUTATED" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
  "AMP PEAK 21(XQ27.1) MUTATED" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"AMP PEAK 21(XQ27.1) WILD-TYPE"   "AMP PEAK 21(XQ27.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"AMP PEAK 21(XQ27.1) WILD-TYPE"   "AMP PEAK 21(XQ27.1) MUTATED" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"AMP PEAK 21(XQ27.1) WILD-TYPE"   "AMP PEAK 21(XQ27.1) MUTATED" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "AMP PEAK 21(XQ27.1) MUTATED" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"AMP PEAK 21(XQ27.1) WILD-TYPE"   "AMP PEAK 21(XQ27.1) MUTATED" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"AMP PEAK 21(XQ27.1) WILD-TYPE"   "AMP PEAK 21(XQ27.1) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
  "AMP PEAK 21(XQ27.1) MUTATED" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"AMP PEAK 21(XQ27.1) WILD-TYPE" "AMP PEAK 21(XQ27.1) WILD-TYPE" 
[1] "hr=" "1"  
D21V2, continuous
                               vv
clus                            T2 T3 T4
  AMP PEAK 21(XQ27.1) MUTATED    4  5  0
  AMP PEAK 21(XQ27.1) WILD-TYPE 65 80  5
D21V3, multiclass
    clus
vv   AMP PEAK 21(XQ27.1) MUTATED AMP PEAK 21(XQ27.1) WILD-TYPE
  T2                           4                            65
  T3                           5                            80
  T4                           0                             5
D21V4, binary
                               cls
clus                              0   1
  AMP PEAK 21(XQ27.1) MUTATED     8   0
  AMP PEAK 21(XQ27.1) WILD-TYPE 118  15
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 21(XQ27.1) MUTATED      8    0
  AMP PEAK 21(XQ27.1) WILD-TYPE  118   15
   clus
vv  AMP PEAK 21(XQ27.1) MUTATED AMP PEAK 21(XQ27.1) WILD-TYPE
  0                           8                           118
  1                           0                            15
                               vv
clus                             R0  R1  RX
  AMP PEAK 21(XQ27.1) MUTATED     7   1   0
  AMP PEAK 21(XQ27.1) WILD-TYPE 112  30   3
D21V5, multiclass
    clus
vv   AMP PEAK 21(XQ27.1) MUTATED AMP PEAK 21(XQ27.1) WILD-TYPE
  R0                           7                           112
  R1                           1                            30
  RX                           0                             3
D21V6, continuous

Clustering(22) Variable = DEL PEAK  1(1P31.3) MUTATION ANALYSIS
D22V1, survival
                               sevent
clus2                             0   1
  DEL PEAK  1(1P31.3) MUTATED    20   1
  DEL PEAK  1(1P31.3) WILD-TYPE 139   0
  DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE 
                           21                           139 
  DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE 
                            1                             0 
$`DEL PEAK  1(1P31.3) MUTATED`
TCGA-CH-5740 TCGA-CH-5753 TCGA-CH-5769 TCGA-CH-5791 TCGA-CH-5794 TCGA-EJ-5499 
        1.02         1.02         2.04        33.01        28.96        17.49 
TCGA-EJ-5504 TCGA-EJ-7788 TCGA-EJ-8472 TCGA-G9-6332 TCGA-G9-6342 TCGA-G9-6351 
        7.53         1.71        66.12        65.92        43.99        39.95 
TCGA-G9-6361 TCGA-G9-6499 TCGA-G9-7525 TCGA-HC-7078 TCGA-HC-7213 TCGA-HC-7231 
       33.14        36.46        16.83         5.33         1.97         2.37 
TCGA-HC-A4ZV TCGA-HI-7168 TCGA-HI-7171 
        0.76        65.92        66.02 

$`DEL PEAK  1(1P31.3) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5744 
        2.99         6.97        22.06        12.99        13.94         1.97 
TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 TCGA-CH-5754 
       24.03         1.02        12.99        35.01        30.97         2.04 
TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5766 
        0.92        44.02        12.00         1.02        23.01         1.02 
TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 
       15.06        24.03        12.99        15.95        26.96         9.96 
TCGA-CH-5790 TCGA-CH-5792 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 
       32.02         2.99        12.43        19.89        19.53        13.02 
TCGA-EJ-5498 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5505 TCGA-EJ-5506 
       17.62        23.97         8.02        17.42        14.70        11.70 
TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 
        5.98        29.82        36.03        24.23        25.91        25.71 
TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 
       23.80        34.88        25.74        27.91        39.29        37.91 
TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 
       27.68        46.13        27.42        25.97        18.64        13.05 
TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 
       41.82        23.80        29.92        17.06        26.99        48.99 
TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 
       61.15         9.70         9.50         9.37         7.66         5.75 
TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 
        5.59         6.28         0.30         5.56         2.10         4.31 
TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 
        5.49         8.48         2.60         2.30         7.13        17.29 
TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-A46B 
        1.41         9.34         6.15        63.98        26.99         5.33 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6343 
        1.05        30.35        63.29        54.87        54.21        18.21 
TCGA-G9-6348 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 
       37.61        27.85        32.88        27.02        32.65        27.65 
TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 
       26.43         3.32        28.77        27.98        26.50        27.81 
TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 
       16.60        17.03        21.83        12.82        11.70        47.41 
TCGA-G9-6496 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 
       33.34        22.16        15.02        15.98        14.83        10.65 
TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 
        1.02         2.01        65.98         2.93         2.01         1.02 
TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7230 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 
        0.99         1.02         1.68         0.99         2.07         1.74 
TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7750 
        1.48         1.68         1.87         2.04         2.01         1.12 
TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-7821 TCGA-HC-8265 TCGA-HI-7169 TCGA-HI-7170 
        3.22         1.48         1.84         2.04        64.08        62.43 
TCGA-J4-8198 
        3.22 

  DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE 
                         0.76                          0.30 
  DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE 
                        66.12                         65.98 
  DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE 
                        17.49                         14.83 
[1] "0.8 - 66.1 (17.5)" "0.3 - 66.0 (14.8)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
  "DEL PEAK  1(1P31.3) MUTATED"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
  "DEL PEAK  1(1P31.3) MUTATED"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  1(1P31.3) WILD-TYPE"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
  "DEL PEAK  1(1P31.3) MUTATED"   "DEL PEAK  1(1P31.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  1(1P31.3) WILD-TYPE" "DEL PEAK  1(1P31.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "DEL PEAK  1(1P31.3) MUTATED" "DEL PEAK  1(1P31.3) WILD-TYPE" 
[1] "hr=" "1"  
D22V2, continuous
                               vv
clus                            T2 T3 T4
  DEL PEAK  1(1P31.3) MUTATED    5 16  0
  DEL PEAK  1(1P31.3) WILD-TYPE 64 69  5
D22V3, multiclass
    clus
vv   DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE
  T2                           5                            64
  T3                          16                            69
  T4                           0                             5
D22V4, binary
                               cls
clus                              0   1
  DEL PEAK  1(1P31.3) MUTATED    16   2
  DEL PEAK  1(1P31.3) WILD-TYPE 110  13
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  1(1P31.3) MUTATED     16    2
  DEL PEAK  1(1P31.3) WILD-TYPE  110   13
   clus
vv  DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE
  0                          16                           110
  1                           2                            13
                               vv
clus                             R0  R1  RX
  DEL PEAK  1(1P31.3) MUTATED    15   6   0
  DEL PEAK  1(1P31.3) WILD-TYPE 104  25   3
D22V5, multiclass
    clus
vv   DEL PEAK  1(1P31.3) MUTATED DEL PEAK  1(1P31.3) WILD-TYPE
  R0                          15                           104
  R1                           6                            25
  RX                           0                             3
D22V6, continuous

Clustering(23) Variable = DEL PEAK  2(1Q42.13) MUTATION ANALYSIS
D23V1, survival
                                sevent
clus2                              0   1
  DEL PEAK  2(1Q42.13) MUTATED    14   1
  DEL PEAK  2(1Q42.13) WILD-TYPE 145   0
  DEL PEAK  2(1Q42.13) MUTATED DEL PEAK  2(1Q42.13) WILD-TYPE 
                            15                            145 
  DEL PEAK  2(1Q42.13) MUTATED DEL PEAK  2(1Q42.13) WILD-TYPE 
                             1                              0 
$`DEL PEAK  2(1Q42.13) MUTATED`
TCGA-CH-5737 TCGA-CH-5764 TCGA-CH-5771 TCGA-EJ-5496 TCGA-EJ-5514 TCGA-EJ-5518 
        2.99         1.02        12.99        19.53        23.80        39.29 
TCGA-EJ-5519 TCGA-EJ-7123 TCGA-EJ-7330 TCGA-EJ-8470 TCGA-G9-6332 TCGA-G9-6499 
       37.91        48.99         6.28        26.99        65.92        36.46 
TCGA-HC-7736 TCGA-HC-7737 TCGA-HI-7171 
        0.99         2.07        66.02 

$`DEL PEAK  2(1Q42.13) WILD-TYPE`
TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5744 
        6.97        22.06         1.02        12.99        13.94         1.97 
TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 TCGA-CH-5753 
       24.03         1.02        12.99        35.01        30.97         1.02 
TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5765 TCGA-CH-5766 
        2.04         0.92        44.02        12.00        23.01         1.02 
TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 
       15.06        24.03         2.04        15.95        26.96         9.96 
TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 
       32.02        33.01         2.99        28.96        12.43        19.89 
TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 
       13.02        17.62        17.49        23.97         8.02        17.42 
TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 
        7.53        14.70        11.70         5.98        29.82        36.03 
TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 
       24.23        25.91        25.71        34.88        25.74        27.91 
TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 
       27.68        46.13        27.42        25.97        18.64        13.05 
TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7125 
       41.82        23.80        29.92        17.06        26.99        61.15 
TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 
        9.70         9.50         9.37         7.66         5.75         5.59 
TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 
        0.30         5.56         2.10         4.31         5.49         8.48 
TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 
        2.60         1.71         2.30         7.13        17.29         1.41 
TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 
        9.34         6.15        63.98        66.12         5.33         1.05 
TCGA-G9-6329 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 
       30.35        63.29        54.87        54.21        43.99        18.21 
TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 
       37.61        39.95        27.85        32.88        33.14        27.02 
TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 
       32.65        27.65        26.43         3.32        28.77        27.98 
TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 
       26.50        27.81        16.60        17.03        21.83        12.82 
TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 
       11.70        47.41        33.34        22.16        15.02        15.98 
TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 
       14.83        10.65        16.83         1.02         2.01        65.98 
TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 
        5.33         2.93         2.01         1.02         0.99         1.02 
TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7740 TCGA-HC-7742 TCGA-HC-7744 
        1.97         1.68         2.37         1.74         1.48         1.68 
TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 
        1.87         2.04         2.01         1.12         3.22         1.48 
TCGA-HC-7821 TCGA-HC-8265 TCGA-HC-A4ZV TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 
        1.84         2.04         0.76        65.92        64.08        62.43 
TCGA-J4-8198 
        3.22 

  DEL PEAK  2(1Q42.13) MUTATED DEL PEAK  2(1Q42.13) WILD-TYPE 
                          0.99                           0.30 
  DEL PEAK  2(1Q42.13) MUTATED DEL PEAK  2(1Q42.13) WILD-TYPE 
                         66.02                          66.12 
  DEL PEAK  2(1Q42.13) MUTATED DEL PEAK  2(1Q42.13) WILD-TYPE 
                         23.80                          14.83 
[1] "1.0 - 66.0 (23.8)" "0.3 - 66.1 (14.8)"
                    TCGA-CH-5737                     TCGA-CH-5738 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK  2(1Q42.13) WILD-TYPE"   "DEL PEAK  2(1Q42.13) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK  2(1Q42.13) WILD-TYPE"   "DEL PEAK  2(1Q42.13) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK  2(1Q42.13) WILD-TYPE"   "DEL PEAK  2(1Q42.13) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK  2(1Q42.13) WILD-TYPE"   "DEL PEAK  2(1Q42.13) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK  2(1Q42.13) WILD-TYPE"   "DEL PEAK  2(1Q42.13) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK  2(1Q42.13) WILD-TYPE"   "DEL PEAK  2(1Q42.13) MUTATED" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"DEL PEAK  2(1Q42.13) WILD-TYPE"   "DEL PEAK  2(1Q42.13) MUTATED" 
                    TCGA-HC-7737                     TCGA-HC-7740 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK  2(1Q42.13) WILD-TYPE"   "DEL PEAK  2(1Q42.13) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK  2(1Q42.13) WILD-TYPE"   "DEL PEAK  2(1Q42.13) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK  2(1Q42.13) WILD-TYPE"   "DEL PEAK  2(1Q42.13) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK  2(1Q42.13) WILD-TYPE"   "DEL PEAK  2(1Q42.13) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK  2(1Q42.13) WILD-TYPE"   "DEL PEAK  2(1Q42.13) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK  2(1Q42.13) WILD-TYPE"   "DEL PEAK  2(1Q42.13) MUTATED" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"DEL PEAK  2(1Q42.13) WILD-TYPE"   "DEL PEAK  2(1Q42.13) MUTATED" 
                    TCGA-HC-7737                     TCGA-HC-7740 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK  2(1Q42.13) WILD-TYPE"   "DEL PEAK  2(1Q42.13) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK  2(1Q42.13) WILD-TYPE"   "DEL PEAK  2(1Q42.13) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK  2(1Q42.13) WILD-TYPE"   "DEL PEAK  2(1Q42.13) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK  2(1Q42.13) WILD-TYPE"   "DEL PEAK  2(1Q42.13) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK  2(1Q42.13) WILD-TYPE"   "DEL PEAK  2(1Q42.13) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK  2(1Q42.13) WILD-TYPE"   "DEL PEAK  2(1Q42.13) MUTATED" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"DEL PEAK  2(1Q42.13) WILD-TYPE"   "DEL PEAK  2(1Q42.13) MUTATED" 
                    TCGA-HC-7737                     TCGA-HC-7740 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK  2(1Q42.13) WILD-TYPE" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK  2(1Q42.13) MUTATED" "DEL PEAK  2(1Q42.13) WILD-TYPE" 
[1] "hr="     "1.6e+09"
D23V2, continuous
                                vv
clus                             T2 T3 T4
  DEL PEAK  2(1Q42.13) MUTATED    8  6  1
  DEL PEAK  2(1Q42.13) WILD-TYPE 61 79  4
D23V3, multiclass
    clus
vv   DEL PEAK  2(1Q42.13) MUTATED DEL PEAK  2(1Q42.13) WILD-TYPE
  T2                            8                             61
  T3                            6                             79
  T4                            1                              4
D23V4, binary
                                cls
clus                               0   1
  DEL PEAK  2(1Q42.13) MUTATED    13   2
  DEL PEAK  2(1Q42.13) WILD-TYPE 113  13
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK  2(1Q42.13) MUTATED     13    2
  DEL PEAK  2(1Q42.13) WILD-TYPE  113   13
   clus
vv  DEL PEAK  2(1Q42.13) MUTATED DEL PEAK  2(1Q42.13) WILD-TYPE
  0                           13                            113
  1                            2                             13
                                vv
clus                              R0  R1  RX
  DEL PEAK  2(1Q42.13) MUTATED    11   2   0
  DEL PEAK  2(1Q42.13) WILD-TYPE 108  29   3
D23V5, multiclass
    clus
vv   DEL PEAK  2(1Q42.13) MUTATED DEL PEAK  2(1Q42.13) WILD-TYPE
  R0                           11                            108
  R1                            2                             29
  RX                            0                              3
D23V6, continuous

Clustering(24) Variable = DEL PEAK  3(2Q22.1) MUTATION ANALYSIS
D24V1, survival
                               sevent
clus2                             0   1
  DEL PEAK  3(2Q22.1) MUTATED    19   1
  DEL PEAK  3(2Q22.1) WILD-TYPE 140   0
  DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE 
                           20                           140 
  DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE 
                            1                             0 
$`DEL PEAK  3(2Q22.1) MUTATED`
TCGA-CH-5767 TCGA-CH-5788 TCGA-EJ-5504 TCGA-EJ-5518 TCGA-EJ-7123 TCGA-EJ-7330 
       15.06        26.96         7.53        39.29        48.99         6.28 
TCGA-EJ-7782 TCGA-EJ-7784 TCGA-EJ-7789 TCGA-G9-6369 TCGA-G9-6499 TCGA-G9-7510 
        2.10         5.49         2.30        27.98        36.46        22.16 
TCGA-G9-7525 TCGA-HC-7080 TCGA-HC-7213 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7744 
       16.83         2.01         1.97         2.37         0.99         1.68 
TCGA-HC-7749 TCGA-HI-7171 
        2.01        66.02 

$`DEL PEAK  3(2Q22.1) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 
       23.01         1.02        24.03         2.04        12.99        15.95 
TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 
        9.96        32.02        33.01         2.99        28.96        12.43 
TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 
       19.89        19.53        13.02        17.62        17.49        23.97 
TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 
        8.02        17.42        14.70        11.70         5.98        29.82 
TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 
       36.03        24.23        25.91        25.71        23.80        34.88 
TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 
       25.74        27.91        37.91        27.68        46.13        27.42 
TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 
       25.97        18.64        13.05        41.82        23.80        29.92 
TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 
       17.06        26.99        61.15         9.70         9.50         9.37 
TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7783 
        7.66         5.75         5.59         0.30         5.56         4.31 
TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 
        8.48         2.60         1.71         7.13        17.29         1.41 
TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B 
        9.34         6.15        63.98        26.99        66.12         5.33 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 
        1.05        30.35        65.92        63.29        54.87        54.21 
TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 
       43.99        18.21        37.61        39.95        27.85        32.88 
TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 
       33.14        27.02        32.65        27.65        26.43         3.32 
TCGA-G9-6367 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 
       28.77        26.50        27.81        16.60        17.03        21.83 
TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7519 TCGA-G9-7521 
       12.82        11.70        47.41        33.34        15.02        15.98 
TCGA-G9-7522 TCGA-G9-7523 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 TCGA-HC-7078 
       14.83        10.65         1.02         2.01        65.98         5.33 
TCGA-HC-7079 TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7230 TCGA-HC-7737 
        2.93         1.02         0.99         1.02         1.68         2.07 
TCGA-HC-7740 TCGA-HC-7742 TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7750 TCGA-HC-7752 
        1.74         1.48         1.87         2.04         1.12         3.22 
TCGA-HC-7818 TCGA-HC-7821 TCGA-HC-8265 TCGA-HC-A4ZV TCGA-HI-7168 TCGA-HI-7169 
        1.48         1.84         2.04         0.76        65.92        64.08 
TCGA-HI-7170 TCGA-J4-8198 
       62.43         3.22 

  DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE 
                         0.99                          0.30 
  DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE 
                        66.02                         66.12 
  DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE 
                        6.905                        15.965 
[1] "1.0 - 66.0 (6.9)"  "0.3 - 66.1 (16.0)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  3(2Q22.1) WILD-TYPE"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  3(2Q22.1) WILD-TYPE"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  3(2Q22.1) WILD-TYPE"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  3(2Q22.1) WILD-TYPE"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  3(2Q22.1) WILD-TYPE"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  3(2Q22.1) MUTATED"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
  "DEL PEAK  3(2Q22.1) MUTATED"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"DEL PEAK  3(2Q22.1) WILD-TYPE"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  3(2Q22.1) WILD-TYPE"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  3(2Q22.1) WILD-TYPE"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  3(2Q22.1) WILD-TYPE"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  3(2Q22.1) WILD-TYPE"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  3(2Q22.1) WILD-TYPE"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  3(2Q22.1) MUTATED"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
  "DEL PEAK  3(2Q22.1) MUTATED"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"DEL PEAK  3(2Q22.1) WILD-TYPE"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  3(2Q22.1) WILD-TYPE"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  3(2Q22.1) WILD-TYPE"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  3(2Q22.1) WILD-TYPE"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  3(2Q22.1) WILD-TYPE"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  3(2Q22.1) WILD-TYPE"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  3(2Q22.1) MUTATED"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
  "DEL PEAK  3(2Q22.1) MUTATED"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"DEL PEAK  3(2Q22.1) WILD-TYPE"   "DEL PEAK  3(2Q22.1) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  3(2Q22.1) WILD-TYPE" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "DEL PEAK  3(2Q22.1) MUTATED" "DEL PEAK  3(2Q22.1) WILD-TYPE" 
[1] "hr="     "1.6e+09"
D24V2, continuous
                               vv
clus                            T2 T3 T4
  DEL PEAK  3(2Q22.1) MUTATED    9 10  1
  DEL PEAK  3(2Q22.1) WILD-TYPE 60 75  4
D24V3, multiclass
    clus
vv   DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  T2                           9                            60
  T3                          10                            75
  T4                           1                             4
D24V4, binary
                               cls
clus                              0   1
  DEL PEAK  3(2Q22.1) MUTATED    17   2
  DEL PEAK  3(2Q22.1) WILD-TYPE 109  13
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  3(2Q22.1) MUTATED     17    2
  DEL PEAK  3(2Q22.1) WILD-TYPE  109   13
   clus
vv  DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  0                          17                           109
  1                           2                            13
                               vv
clus                             R0  R1  RX
  DEL PEAK  3(2Q22.1) MUTATED    15   4   0
  DEL PEAK  3(2Q22.1) WILD-TYPE 104  27   3
D24V5, multiclass
    clus
vv   DEL PEAK  3(2Q22.1) MUTATED DEL PEAK  3(2Q22.1) WILD-TYPE
  R0                          15                           104
  R1                           4                            27
  RX                           0                             3
D24V6, continuous

Clustering(25) Variable = DEL PEAK  4(3P13) MUTATION ANALYSIS
D25V1, survival
                             sevent
clus2                           0   1
  DEL PEAK  4(3P13) MUTATED    27   0
  DEL PEAK  4(3P13) WILD-TYPE 132   1
  DEL PEAK  4(3P13) MUTATED DEL PEAK  4(3P13) WILD-TYPE 
                         27                         133 
  DEL PEAK  4(3P13) MUTATED DEL PEAK  4(3P13) WILD-TYPE 
                          0                           1 
$`DEL PEAK  4(3P13) MUTATED`
TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5741 TCGA-CH-5746 TCGA-CH-5752 TCGA-CH-5753 
        6.97        22.06        12.99        24.03        30.97         1.02 
TCGA-CH-5764 TCGA-EJ-5497 TCGA-EJ-5501 TCGA-EJ-5505 TCGA-EJ-5510 TCGA-EJ-5517 
        1.02        13.02        23.97        14.70        24.23        27.91 
TCGA-EJ-5542 TCGA-EJ-7327 TCGA-EJ-7788 TCGA-EJ-7797 TCGA-EJ-8469 TCGA-G9-6332 
       17.06         5.75         1.71         6.15        63.98        65.92 
TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6384 TCGA-G9-7523 TCGA-HC-7077 
       27.02        32.65        27.65        12.82        10.65        65.98 
TCGA-HC-7747 TCGA-HC-7749 TCGA-HI-7168 
        1.87         2.01        65.92 

$`DEL PEAK  4(3P13) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5740 TCGA-CH-5743 TCGA-CH-5744 TCGA-CH-5748 TCGA-CH-5750 
        2.99         1.02        13.94         1.97         1.02        12.99 
TCGA-CH-5751 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5765 
       35.01         2.04         0.92        44.02        12.00        23.01 
TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 
        1.02        15.06        24.03         2.04        12.99        15.95 
TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 
       26.96         9.96        32.02        33.01         2.99        28.96 
TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5502 
       12.43        19.89        19.53        17.62        17.49         8.02 
TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 
       17.42         7.53        11.70         5.98        29.82        36.03 
TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5518 
       25.91        25.71        23.80        34.88        25.74        39.29 
TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 
       37.91        27.68        46.13        27.42        25.97        18.64 
TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-7115 TCGA-EJ-7123 
       13.05        41.82        23.80        29.92        26.99        48.99 
TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7328 
       61.15         9.70         9.50         9.37         7.66         5.59 
TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 
        6.28         0.30         5.56         2.10         4.31         5.49 
TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 
        8.48         2.60         2.30         7.13        17.29         1.41 
TCGA-EJ-7794 TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6329 
        9.34        26.99        66.12         5.33         1.05        30.35 
TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 
       63.29        54.87        54.21        43.99        18.21        37.61 
TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6365 TCGA-G9-6366 
       39.95        27.85        32.88        33.14        26.43         3.32 
TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 
       28.77        27.98        26.50        27.81        16.60        17.03 
TCGA-G9-6378 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 
       21.83        11.70        47.41        33.34        36.46        22.16 
TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 
       15.02        15.98        14.83        16.83         1.02         2.01 
TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 
        5.33         2.93         2.01         1.02         0.99         1.02 
TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 
        1.97         1.68         2.37         0.99         2.07         1.74 
TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7748 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 
        1.48         1.68         2.04         1.12         3.22         1.48 
TCGA-HC-7821 TCGA-HC-8265 TCGA-HC-A4ZV TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 
        1.84         2.04         0.76        64.08        62.43        66.02 
TCGA-J4-8198 
        3.22 

  DEL PEAK  4(3P13) MUTATED DEL PEAK  4(3P13) WILD-TYPE 
                       1.02                        0.30 
  DEL PEAK  4(3P13) MUTATED DEL PEAK  4(3P13) WILD-TYPE 
                      65.98                       66.12 
  DEL PEAK  4(3P13) MUTATED DEL PEAK  4(3P13) WILD-TYPE 
                      17.06                       15.02 
[1] "1.0 - 66.0 (17.1)" "0.3 - 66.1 (15.0)"
                 TCGA-CH-5737                  TCGA-CH-5738 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-CH-5739                  TCGA-CH-5740 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-CH-5753                  TCGA-CH-5754 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-EJ-8469 
  "DEL PEAK  4(3P13) MUTATED"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-EJ-8470                  TCGA-EJ-8472 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-A46B                  TCGA-FC-7708 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
  "DEL PEAK  4(3P13) MUTATED"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-G9-6364                  TCGA-G9-6365 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7075                  TCGA-HC-7077 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-HC-7078                  TCGA-HC-7079 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7080                  TCGA-HC-7209 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7212 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7213                  TCGA-HC-7230 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7231                  TCGA-HC-7736 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7737                  TCGA-HC-7740 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7742                  TCGA-HC-7744 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7748 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7749                  TCGA-HC-7750 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7752                  TCGA-HC-7818 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7821                  TCGA-HC-8265 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-A4ZV                  TCGA-HI-7168 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5737                  TCGA-CH-5738 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-CH-5739                  TCGA-CH-5740 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-CH-5753                  TCGA-CH-5754 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-EJ-8469 
  "DEL PEAK  4(3P13) MUTATED"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-EJ-8470                  TCGA-EJ-8472 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-A46B                  TCGA-FC-7708 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
  "DEL PEAK  4(3P13) MUTATED"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-G9-6364                  TCGA-G9-6365 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7075                  TCGA-HC-7077 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-HC-7078                  TCGA-HC-7079 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7080                  TCGA-HC-7209 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7212 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7213                  TCGA-HC-7230 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7231                  TCGA-HC-7736 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7737                  TCGA-HC-7740 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7742                  TCGA-HC-7744 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7748 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7749                  TCGA-HC-7750 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7752                  TCGA-HC-7818 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7821                  TCGA-HC-8265 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-A4ZV                  TCGA-HI-7168 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5737                  TCGA-CH-5738 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-CH-5739                  TCGA-CH-5740 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-CH-5753                  TCGA-CH-5754 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-EJ-8469 
  "DEL PEAK  4(3P13) MUTATED"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-EJ-8470                  TCGA-EJ-8472 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EJ-A46B                  TCGA-FC-7708 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6362                  TCGA-G9-6363 
  "DEL PEAK  4(3P13) MUTATED"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-G9-6364                  TCGA-G9-6365 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7075                  TCGA-HC-7077 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-HC-7078                  TCGA-HC-7079 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7080                  TCGA-HC-7209 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7212 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7213                  TCGA-HC-7230 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7231                  TCGA-HC-7736 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7737                  TCGA-HC-7740 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7742                  TCGA-HC-7744 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7748 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7749                  TCGA-HC-7750 
  "DEL PEAK  4(3P13) MUTATED" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7752                  TCGA-HC-7818 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-7821                  TCGA-HC-8265 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HC-A4ZV                  TCGA-HI-7168 
"DEL PEAK  4(3P13) WILD-TYPE"   "DEL PEAK  4(3P13) MUTATED" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"DEL PEAK  4(3P13) WILD-TYPE" "DEL PEAK  4(3P13) WILD-TYPE" 
[1] "hr=" "1"  
D25V2, continuous
                             vv
clus                          T2 T3 T4
  DEL PEAK  4(3P13) MUTATED    8 18  1
  DEL PEAK  4(3P13) WILD-TYPE 61 67  4
D25V3, multiclass
    clus
vv   DEL PEAK  4(3P13) MUTATED DEL PEAK  4(3P13) WILD-TYPE
  T2                         8                          61
  T3                        18                          67
  T4                         1                           4
D25V4, binary
                             cls
clus                            0   1
  DEL PEAK  4(3P13) MUTATED    23   2
  DEL PEAK  4(3P13) WILD-TYPE 103  13
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK  4(3P13) MUTATED     23    2
  DEL PEAK  4(3P13) WILD-TYPE  103   13
   clus
vv  DEL PEAK  4(3P13) MUTATED DEL PEAK  4(3P13) WILD-TYPE
  0                        23                         103
  1                         2                          13
                             vv
clus                          R0 R1 RX
  DEL PEAK  4(3P13) MUTATED   21  4  1
  DEL PEAK  4(3P13) WILD-TYPE 98 27  2
D25V5, multiclass
    clus
vv   DEL PEAK  4(3P13) MUTATED DEL PEAK  4(3P13) WILD-TYPE
  R0                        21                          98
  R1                         4                          27
  RX                         1                           2
D25V6, continuous

Clustering(26) Variable = DEL PEAK  5(3Q29) MUTATION ANALYSIS
D26V1, survival
                             sevent
clus2                           0   1
  DEL PEAK  5(3Q29) MUTATED    10   0
  DEL PEAK  5(3Q29) WILD-TYPE 149   1
  DEL PEAK  5(3Q29) MUTATED DEL PEAK  5(3Q29) WILD-TYPE 
                         10                         150 
  DEL PEAK  5(3Q29) MUTATED DEL PEAK  5(3Q29) WILD-TYPE 
                          0                           1 
$`DEL PEAK  5(3Q29) MUTATED`
TCGA-CH-5768 TCGA-EJ-5497 TCGA-EJ-5542 TCGA-EJ-7792 TCGA-G9-6332 TCGA-G9-6361 
       24.03        13.02        17.06        17.29        65.92        33.14 
TCGA-G9-7523 TCGA-G9-7525 TCGA-HC-7821 TCGA-HI-7168 
       10.65        16.83         1.84        65.92 

$`DEL PEAK  5(3Q29) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 
       23.01         1.02        15.06         2.04        12.99        15.95 
TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 
       26.96         9.96        32.02        33.01         2.99        28.96 
TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 
       12.43        19.89        19.53        17.62        17.49        23.97 
TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 
        8.02        17.42         7.53        14.70        11.70         5.98 
TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 
       29.82        36.03        24.23        25.91        25.71        23.80 
TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5521 
       34.88        25.74        27.91        39.29        37.91        27.68 
TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 
       46.13        27.42        25.97        18.64        13.05        41.82 
TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 
       23.80        29.92        26.99        48.99        61.15         9.70 
TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 
        9.50         9.37         7.66         5.75         5.59         6.28 
TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 
        0.30         5.56         2.10         4.31         5.49         8.48 
TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7793 TCGA-EJ-7794 
        2.60         1.71         2.30         7.13         1.41         9.34 
TCGA-EJ-7797 TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 
        6.15        63.98        26.99        66.12         5.33         1.05 
TCGA-G9-6329 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 
       30.35        63.29        54.87        54.21        43.99        18.21 
TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6362 TCGA-G9-6363 
       37.61        39.95        27.85        32.88        27.02        32.65 
TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 
       27.65        26.43         3.32        28.77        27.98        26.50 
TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 
       27.81        16.60        17.03        21.83        12.82        11.70 
TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 
       47.41        33.34        36.46        22.16        15.02        15.98 
TCGA-G9-7522 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 
       14.83         1.02         2.01        65.98         5.33         2.93 
TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7213 TCGA-HC-7230 
        2.01         1.02         0.99         1.02         1.97         1.68 
TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7742 TCGA-HC-7744 
        2.37         0.99         2.07         1.74         1.48         1.68 
TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 
        1.87         2.04         2.01         1.12         3.22         1.48 
TCGA-HC-8265 TCGA-HC-A4ZV TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
        2.04         0.76        64.08        62.43        66.02         3.22 

  DEL PEAK  5(3Q29) MUTATED DEL PEAK  5(3Q29) WILD-TYPE 
                       1.84                        0.30 
  DEL PEAK  5(3Q29) MUTATED DEL PEAK  5(3Q29) WILD-TYPE 
                      65.92                       66.12 
  DEL PEAK  5(3Q29) MUTATED DEL PEAK  5(3Q29) WILD-TYPE 
                     17.175                      14.765 
[1] "1.8 - 65.9 (17.2)" "0.3 - 66.1 (14.8)"
                 TCGA-CH-5737                  TCGA-CH-5738 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-EJ-8469 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-8470                  TCGA-EJ-8472 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-A46B                  TCGA-FC-7708 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-G9-7525                  TCGA-H9-7775 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7075                  TCGA-HC-7077 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7078                  TCGA-HC-7079 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7080                  TCGA-HC-7209 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7212 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7213                  TCGA-HC-7230 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7231                  TCGA-HC-7736 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7737                  TCGA-HC-7740 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7742                  TCGA-HC-7744 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7748 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7749                  TCGA-HC-7750 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7752                  TCGA-HC-7818 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7821                  TCGA-HC-8265 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-A4ZV                  TCGA-HI-7168 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5737                  TCGA-CH-5738 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-EJ-8469 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-8470                  TCGA-EJ-8472 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-A46B                  TCGA-FC-7708 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-G9-7525                  TCGA-H9-7775 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7075                  TCGA-HC-7077 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7078                  TCGA-HC-7079 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7080                  TCGA-HC-7209 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7212 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7213                  TCGA-HC-7230 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7231                  TCGA-HC-7736 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7737                  TCGA-HC-7740 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7742                  TCGA-HC-7744 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7748 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7749                  TCGA-HC-7750 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7752                  TCGA-HC-7818 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7821                  TCGA-HC-8265 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-A4ZV                  TCGA-HI-7168 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5737                  TCGA-CH-5738 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5761                  TCGA-CH-5762 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5767                  TCGA-CH-5768 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-EJ-8469 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-8470                  TCGA-EJ-8472 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-EJ-A46B                  TCGA-FC-7708 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-G9-6333                  TCGA-G9-6336 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-G9-6362                  TCGA-G9-6363 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-6499                  TCGA-G9-7510 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-G9-7525                  TCGA-H9-7775 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7075                  TCGA-HC-7077 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7078                  TCGA-HC-7079 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7080                  TCGA-HC-7209 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7212 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7213                  TCGA-HC-7230 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7231                  TCGA-HC-7736 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7737                  TCGA-HC-7740 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7742                  TCGA-HC-7744 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7747                  TCGA-HC-7748 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7749                  TCGA-HC-7750 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7752                  TCGA-HC-7818 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-7821                  TCGA-HC-8265 
  "DEL PEAK  5(3Q29) MUTATED" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HC-A4ZV                  TCGA-HI-7168 
"DEL PEAK  5(3Q29) WILD-TYPE"   "DEL PEAK  5(3Q29) MUTATED" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"DEL PEAK  5(3Q29) WILD-TYPE" "DEL PEAK  5(3Q29) WILD-TYPE" 
[1] "hr=" "1"  
D26V2, continuous
                             vv
clus                          T2 T3 T4
  DEL PEAK  5(3Q29) MUTATED    3  7  0
  DEL PEAK  5(3Q29) WILD-TYPE 66 78  5
D26V3, multiclass
    clus
vv   DEL PEAK  5(3Q29) MUTATED DEL PEAK  5(3Q29) WILD-TYPE
  T2                         3                          66
  T3                         7                          78
  T4                         0                           5
D26V4, binary
                             cls
clus                            0   1
  DEL PEAK  5(3Q29) MUTATED     9   1
  DEL PEAK  5(3Q29) WILD-TYPE 117  14
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK  5(3Q29) MUTATED      9    1
  DEL PEAK  5(3Q29) WILD-TYPE  117   14
   clus
vv  DEL PEAK  5(3Q29) MUTATED DEL PEAK  5(3Q29) WILD-TYPE
  0                         9                         117
  1                         1                          14
                             vv
clus                           R0  R1  RX
  DEL PEAK  5(3Q29) MUTATED     7   2   0
  DEL PEAK  5(3Q29) WILD-TYPE 112  29   3
D26V5, multiclass
    clus
vv   DEL PEAK  5(3Q29) MUTATED DEL PEAK  5(3Q29) WILD-TYPE
  R0                         7                         112
  R1                         2                          29
  RX                         0                           3
D26V6, continuous

Clustering(27) Variable = DEL PEAK  6(4Q28.2) MUTATION ANALYSIS
D27V1, survival
                               sevent
clus2                             0   1
  DEL PEAK  6(4Q28.2) MUTATED    14   0
  DEL PEAK  6(4Q28.2) WILD-TYPE 145   1
  DEL PEAK  6(4Q28.2) MUTATED DEL PEAK  6(4Q28.2) WILD-TYPE 
                           14                           146 
  DEL PEAK  6(4Q28.2) MUTATED DEL PEAK  6(4Q28.2) WILD-TYPE 
                            0                             1 
$`DEL PEAK  6(4Q28.2) MUTATED`
TCGA-CH-5751 TCGA-EJ-5509 TCGA-EJ-5518 TCGA-EJ-5521 TCGA-EJ-7123 TCGA-EJ-7330 
       35.01        36.03        39.29        27.68        48.99         6.28 
TCGA-EJ-7331 TCGA-EJ-7782 TCGA-EJ-7789 TCGA-G9-6361 TCGA-G9-6377 TCGA-G9-6499 
        0.30         2.10         2.30        33.14        17.03        36.46 
TCGA-HC-7080 TCGA-HC-7749 
        2.01         2.01 

$`DEL PEAK  6(4Q28.2) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5753 
        1.97        24.03         1.02        12.99        30.97         1.02 
TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 
        2.04         0.92        44.02        12.00         1.02        23.01 
TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 
        1.02        15.06        24.03         2.04        12.99        15.95 
TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 
       26.96         9.96        32.02        33.01         2.99        28.96 
TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 
       12.43        19.89        19.53        13.02        17.62        17.49 
TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 
       23.97         8.02        17.42         7.53        14.70        11.70 
TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 
        5.98        29.82        24.23        25.91        25.71        23.80 
TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5519 TCGA-EJ-5522 TCGA-EJ-5524 
       34.88        25.74        27.91        37.91        46.13        27.42 
TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 
       25.97        18.64        13.05        41.82        23.80        29.92 
TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 
       17.06        26.99        61.15         9.70         9.50         9.37 
TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7781 TCGA-EJ-7783 TCGA-EJ-7784 
        7.66         5.75         5.59         5.56         4.31         5.49 
TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 
        8.48         2.60         1.71         7.13        17.29         1.41 
TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B 
        9.34         6.15        63.98        26.99        66.12         5.33 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 
        1.05        30.35        65.92        63.29        54.87        54.21 
TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 
       43.99        18.21        37.61        39.95        27.85        32.88 
TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 
       27.02        32.65        27.65        26.43         3.32        28.77 
TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6378 TCGA-G9-6384 
       27.98        26.50        27.81        16.60        21.83        12.82 
TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 
       11.70        47.41        33.34        22.16        15.02        15.98 
TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 
       14.83        10.65        16.83         1.02         2.01        65.98 
TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7213 
        5.33         2.93         1.02         0.99         1.02         1.97 
TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7742 
        1.68         2.37         0.99         2.07         1.74         1.48 
TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 
        1.68         1.87         2.04         1.12         3.22         1.48 
TCGA-HC-7821 TCGA-HC-8265 TCGA-HC-A4ZV TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 
        1.84         2.04         0.76        65.92        64.08        62.43 
TCGA-HI-7171 TCGA-J4-8198 
       66.02         3.22 

  DEL PEAK  6(4Q28.2) MUTATED DEL PEAK  6(4Q28.2) WILD-TYPE 
                         0.30                          0.76 
  DEL PEAK  6(4Q28.2) MUTATED DEL PEAK  6(4Q28.2) WILD-TYPE 
                        48.99                         66.12 
  DEL PEAK  6(4Q28.2) MUTATED DEL PEAK  6(4Q28.2) WILD-TYPE 
                       22.355                        14.925 
[1] "0.3 - 49.0 (22.4)" "0.8 - 66.1 (14.9)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK  6(4Q28.2) MUTATED" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  6(4Q28.2) WILD-TYPE"   "DEL PEAK  6(4Q28.2) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  6(4Q28.2) WILD-TYPE"   "DEL PEAK  6(4Q28.2) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  6(4Q28.2) WILD-TYPE"   "DEL PEAK  6(4Q28.2) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK  6(4Q28.2) MUTATED" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK  6(4Q28.2) MUTATED"   "DEL PEAK  6(4Q28.2) MUTATED" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  6(4Q28.2) WILD-TYPE"   "DEL PEAK  6(4Q28.2) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  6(4Q28.2) WILD-TYPE"   "DEL PEAK  6(4Q28.2) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  6(4Q28.2) WILD-TYPE"   "DEL PEAK  6(4Q28.2) MUTATED" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
  "DEL PEAK  6(4Q28.2) MUTATED" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  6(4Q28.2) MUTATED" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
  "DEL PEAK  6(4Q28.2) MUTATED" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
  "DEL PEAK  6(4Q28.2) MUTATED" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK  6(4Q28.2) MUTATED" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  6(4Q28.2) WILD-TYPE"   "DEL PEAK  6(4Q28.2) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  6(4Q28.2) WILD-TYPE"   "DEL PEAK  6(4Q28.2) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  6(4Q28.2) WILD-TYPE"   "DEL PEAK  6(4Q28.2) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK  6(4Q28.2) MUTATED" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK  6(4Q28.2) MUTATED"   "DEL PEAK  6(4Q28.2) MUTATED" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  6(4Q28.2) WILD-TYPE"   "DEL PEAK  6(4Q28.2) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  6(4Q28.2) WILD-TYPE"   "DEL PEAK  6(4Q28.2) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  6(4Q28.2) WILD-TYPE"   "DEL PEAK  6(4Q28.2) MUTATED" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
  "DEL PEAK  6(4Q28.2) MUTATED" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  6(4Q28.2) MUTATED" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
  "DEL PEAK  6(4Q28.2) MUTATED" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
  "DEL PEAK  6(4Q28.2) MUTATED" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK  6(4Q28.2) MUTATED" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  6(4Q28.2) WILD-TYPE"   "DEL PEAK  6(4Q28.2) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  6(4Q28.2) WILD-TYPE"   "DEL PEAK  6(4Q28.2) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  6(4Q28.2) WILD-TYPE"   "DEL PEAK  6(4Q28.2) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK  6(4Q28.2) MUTATED" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK  6(4Q28.2) MUTATED"   "DEL PEAK  6(4Q28.2) MUTATED" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  6(4Q28.2) WILD-TYPE"   "DEL PEAK  6(4Q28.2) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  6(4Q28.2) WILD-TYPE"   "DEL PEAK  6(4Q28.2) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  6(4Q28.2) WILD-TYPE"   "DEL PEAK  6(4Q28.2) MUTATED" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
  "DEL PEAK  6(4Q28.2) MUTATED" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  6(4Q28.2) MUTATED" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
  "DEL PEAK  6(4Q28.2) MUTATED" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
  "DEL PEAK  6(4Q28.2) MUTATED" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK  6(4Q28.2) WILD-TYPE" "DEL PEAK  6(4Q28.2) WILD-TYPE" 
[1] "hr=" "1"  
D27V2, continuous
                               vv
clus                            T2 T3 T4
  DEL PEAK  6(4Q28.2) MUTATED    6  6  2
  DEL PEAK  6(4Q28.2) WILD-TYPE 63 79  3
D27V3, multiclass
    clus
vv   DEL PEAK  6(4Q28.2) MUTATED DEL PEAK  6(4Q28.2) WILD-TYPE
  T2                           6                            63
  T3                           6                            79
  T4                           2                             3
D27V4, binary
                               cls
clus                              0   1
  DEL PEAK  6(4Q28.2) MUTATED    13   1
  DEL PEAK  6(4Q28.2) WILD-TYPE 113  14
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  6(4Q28.2) MUTATED     13    1
  DEL PEAK  6(4Q28.2) WILD-TYPE  113   14
   clus
vv  DEL PEAK  6(4Q28.2) MUTATED DEL PEAK  6(4Q28.2) WILD-TYPE
  0                          13                           113
  1                           1                            14
                               vv
clus                             R0  R1  RX
  DEL PEAK  6(4Q28.2) MUTATED    11   3   0
  DEL PEAK  6(4Q28.2) WILD-TYPE 108  28   3
D27V5, multiclass
    clus
vv   DEL PEAK  6(4Q28.2) MUTATED DEL PEAK  6(4Q28.2) WILD-TYPE
  R0                          11                           108
  R1                           3                            28
  RX                           0                             3
D27V6, continuous

Clustering(28) Variable = DEL PEAK  7(5Q11.2) MUTATION ANALYSIS
D28V1, survival
                               sevent
clus2                             0   1
  DEL PEAK  7(5Q11.2) MUTATED    24   0
  DEL PEAK  7(5Q11.2) WILD-TYPE 135   1
  DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE 
                           24                           136 
  DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE 
                            0                             1 
$`DEL PEAK  7(5Q11.2) MUTATED`
TCGA-CH-5751 TCGA-CH-5761 TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5768 TCGA-CH-5792 
       35.01         0.92        23.01         1.02        24.03         2.99 
TCGA-EJ-5501 TCGA-EJ-5507 TCGA-EJ-5509 TCGA-EJ-5519 TCGA-EJ-5525 TCGA-EJ-5526 
       23.97         5.98        36.03        37.91        25.97        18.64 
TCGA-EJ-7115 TCGA-EJ-7789 TCGA-EJ-8472 TCGA-G9-6338 TCGA-G9-6499 TCGA-G9-7510 
       26.99         2.30        66.12        54.21        36.46        22.16 
TCGA-G9-7521 TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7821 TCGA-HI-7168 
       15.98         1.02        65.98         5.33         1.84        65.92 

$`DEL PEAK  7(5Q11.2) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5753 
        1.97        24.03         1.02        12.99        30.97         1.02 
TCGA-CH-5754 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5767 TCGA-CH-5769 
        2.04        44.02        12.00         1.02        15.06         2.04 
TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 
       12.99        15.95        26.96         9.96        32.02        33.01 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 
       17.49         8.02        17.42         7.53        14.70        11.70 
TCGA-EJ-5508 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 
       29.82        24.23        25.91        25.71        23.80        34.88 
TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 
       25.74        27.91        39.29        27.68        46.13        27.42 
TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7123 
       13.05        41.82        23.80        29.92        17.06        48.99 
TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 
       61.15         9.70         9.50         9.37         7.66         5.75 
TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 
        5.59         6.28         0.30         5.56         2.10         4.31 
TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 
        5.49         8.48         2.60         1.71         7.13        17.29 
TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-A46B 
        1.41         9.34         6.15        63.98        26.99         5.33 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6342 
        1.05        30.35        65.92        63.29        54.87        43.99 
TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 
       18.21        37.61        39.95        27.85        32.88        33.14 
TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 
       27.02        32.65        27.65        26.43         3.32        28.77 
TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 
       27.98        26.50        27.81        16.60        17.03        21.83 
TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7519 TCGA-G9-7522 
       12.82        11.70        47.41        33.34        15.02        14.83 
TCGA-G9-7523 TCGA-G9-7525 TCGA-HC-7075 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 
       10.65        16.83         2.01         2.93         2.01         1.02 
TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 
        0.99         1.02         1.97         1.68         2.37         0.99 
TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 
        2.07         1.74         1.48         1.68         1.87         2.04 
TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-8265 TCGA-HC-A4ZV 
        2.01         1.12         3.22         1.48         2.04         0.76 
TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       64.08        62.43        66.02         3.22 

  DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE 
                         0.92                          0.30 
  DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE 
                        66.12                         66.02 
  DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE 
                       23.490                        13.495 
[1] "0.9 - 66.1 (23.5)" "0.3 - 66.0 (13.5)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-HC-7078                    TCGA-HC-7079 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-HC-7078                    TCGA-HC-7079 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-HC-7078                    TCGA-HC-7079 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
[1] "hr="     "1.6e+09"
D28V2, continuous
                               vv
clus                            T2 T3 T4
  DEL PEAK  7(5Q11.2) MUTATED    3 20  1
  DEL PEAK  7(5Q11.2) WILD-TYPE 66 65  4
D28V3, multiclass
    clus
vv   DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE
  T2                           3                            66
  T3                          20                            65
  T4                           1                             4
D28V4, binary
                               cls
clus                              0   1
  DEL PEAK  7(5Q11.2) MUTATED    15   7
  DEL PEAK  7(5Q11.2) WILD-TYPE 111   8
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  7(5Q11.2) MUTATED     15    7
  DEL PEAK  7(5Q11.2) WILD-TYPE  111    8
   clus
vv  DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE
  0                          15                           111
  1                           7                             8
                               vv
clus                             R0  R1  RX
  DEL PEAK  7(5Q11.2) MUTATED    18   4   0
  DEL PEAK  7(5Q11.2) WILD-TYPE 101  27   3
D28V5, multiclass
    clus
vv   DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE
  R0                          18                           101
  R1                           4                            27
  RX                           0                             3
D28V6, continuous

Clustering(29) Variable = DEL PEAK  8(5Q21.1) MUTATION ANALYSIS
D29V1, survival
                               sevent
clus2                             0   1
  DEL PEAK  8(5Q21.1) MUTATED    28   0
  DEL PEAK  8(5Q21.1) WILD-TYPE 131   1
  DEL PEAK  8(5Q21.1) MUTATED DEL PEAK  8(5Q21.1) WILD-TYPE 
                           28                           132 
  DEL PEAK  8(5Q21.1) MUTATED DEL PEAK  8(5Q21.1) WILD-TYPE 
                            0                             1 
$`DEL PEAK  8(5Q21.1) MUTATED`
TCGA-CH-5737 TCGA-CH-5751 TCGA-CH-5761 TCGA-CH-5766 TCGA-CH-5788 TCGA-CH-5792 
        2.99        35.01         0.92         1.02        26.96         2.99 
TCGA-EJ-5501 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5507 TCGA-EJ-5509 TCGA-EJ-5521 
       23.97         7.53        14.70         5.98        36.03        27.68 
TCGA-EJ-5531 TCGA-EJ-7123 TCGA-EJ-7315 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7782 
       23.80        48.99         9.50         6.28         0.30         2.10 
TCGA-EJ-7784 TCGA-EJ-7789 TCGA-EJ-8470 TCGA-EJ-8472 TCGA-G9-6338 TCGA-G9-6369 
        5.49         2.30        26.99        66.12        54.21        27.98 
TCGA-G9-6496 TCGA-G9-6499 TCGA-HC-7080 TCGA-HI-7168 
       33.34        36.46         2.01        65.92 

$`DEL PEAK  8(5Q21.1) WILD-TYPE`
TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5744 
        6.97        22.06         1.02        12.99        13.94         1.97 
TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5753 TCGA-CH-5754 
       24.03         1.02        12.99        30.97         1.02         2.04 
TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5767 TCGA-CH-5768 
       44.02        12.00         1.02        23.01        15.06        24.03 
TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 
        2.04        12.99        15.95         9.96        32.02        33.01 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5506 TCGA-EJ-5508 TCGA-EJ-5510 
       17.49         8.02        17.42        11.70        29.82        24.23 
TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 
       25.91        25.71        23.80        34.88        25.74        27.91 
TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 
       39.29        37.91        46.13        27.42        25.97        18.64 
TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7125 
       13.05        41.82        29.92        17.06        26.99        61.15 
TCGA-EJ-7314 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7781 
        9.70         9.37         7.66         5.75         5.59         5.56 
TCGA-EJ-7783 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 
        4.31         8.48         2.60         1.71         7.13        17.29 
TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 TCGA-EJ-A46B TCGA-FC-7708 
        1.41         9.34         6.15        63.98         5.33         1.05 
TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6342 TCGA-G9-6343 
       30.35        65.92        63.29        54.87        43.99        18.21 
TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 
       37.61        39.95        27.85        32.88        33.14        27.02 
TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6370 
       32.65        27.65        26.43         3.32        28.77        26.50 
TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 
       27.81        16.60        17.03        21.83        12.82        11.70 
TCGA-G9-6494 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 
       47.41        22.16        15.02        15.98        14.83        10.65 
TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 
       16.83         1.02         2.01        65.98         5.33         2.93 
TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 
        1.02         0.99         1.02         1.97         1.68         2.37 
TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 
        0.99         2.07         1.74         1.48         1.68         1.87 
TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-7821 
        2.04         2.01         1.12         3.22         1.48         1.84 
TCGA-HC-8265 TCGA-HC-A4ZV TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
        2.04         0.76        64.08        62.43        66.02         3.22 

  DEL PEAK  8(5Q21.1) MUTATED DEL PEAK  8(5Q21.1) WILD-TYPE 
                         0.30                          0.76 
  DEL PEAK  8(5Q21.1) MUTATED DEL PEAK  8(5Q21.1) WILD-TYPE 
                        66.12                         66.02 
  DEL PEAK  8(5Q21.1) MUTATED DEL PEAK  8(5Q21.1) WILD-TYPE 
                        19.25                         15.04 
[1] "0.3 - 66.1 (19.2)" "0.8 - 66.0 (15.0)"
                   TCGA-CH-5737                    TCGA-CH-5738 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK  8(5Q21.1) MUTATED"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK  8(5Q21.1) MUTATED"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
  "DEL PEAK  8(5Q21.1) MUTATED"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK  8(5Q21.1) MUTATED"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK  8(5Q21.1) MUTATED"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
  "DEL PEAK  8(5Q21.1) MUTATED"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK  8(5Q21.1) MUTATED"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK  8(5Q21.1) MUTATED"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
  "DEL PEAK  8(5Q21.1) MUTATED"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
  "DEL PEAK  8(5Q21.1) MUTATED" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"DEL PEAK  8(5Q21.1) WILD-TYPE"   "DEL PEAK  8(5Q21.1) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK  8(5Q21.1) WILD-TYPE" "DEL PEAK  8(5Q21.1) WILD-TYPE" 
[1] "hr="     "1.6e+09"
D29V2, continuous
                               vv
clus                            T2 T3 T4
  DEL PEAK  8(5Q21.1) MUTATED   11 16  1
  DEL PEAK  8(5Q21.1) WILD-TYPE 58 69  4
D29V3, multiclass
    clus
vv   DEL PEAK  8(5Q21.1) MUTATED DEL PEAK  8(5Q21.1) WILD-TYPE
  T2                          11                            58
  T3                          16                            69
  T4                           1                             4
D29V4, binary
                               cls
clus                              0   1
  DEL PEAK  8(5Q21.1) MUTATED    23   5
  DEL PEAK  8(5Q21.1) WILD-TYPE 103  10
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  8(5Q21.1) MUTATED     23    5
  DEL PEAK  8(5Q21.1) WILD-TYPE  103   10
   clus
vv  DEL PEAK  8(5Q21.1) MUTATED DEL PEAK  8(5Q21.1) WILD-TYPE
  0                          23                           103
  1                           5                            10
                               vv
clus                            R0 R1 RX
  DEL PEAK  8(5Q21.1) MUTATED   24  3  0
  DEL PEAK  8(5Q21.1) WILD-TYPE 95 28  3
D29V5, multiclass
    clus
vv   DEL PEAK  8(5Q21.1) MUTATED DEL PEAK  8(5Q21.1) WILD-TYPE
  R0                          24                            95
  R1                           3                            28
  RX                           0                             3
D29V6, continuous

Clustering(30) Variable = DEL PEAK  9(6Q15) MUTATION ANALYSIS
D30V1, survival
                             sevent
clus2                           0   1
  DEL PEAK  9(6Q15) MUTATED    51   0
  DEL PEAK  9(6Q15) WILD-TYPE 108   1
  DEL PEAK  9(6Q15) MUTATED DEL PEAK  9(6Q15) WILD-TYPE 
                         51                         109 
  DEL PEAK  9(6Q15) MUTATED DEL PEAK  9(6Q15) WILD-TYPE 
                          0                           1 
$`DEL PEAK  9(6Q15) MUTATED`
TCGA-CH-5737 TCGA-CH-5740 TCGA-CH-5744 TCGA-CH-5748 TCGA-CH-5751 TCGA-CH-5753 
        2.99         1.02         1.97         1.02        35.01         1.02 
TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5788 TCGA-CH-5792 
        2.04         0.92         1.02        15.06        26.96         2.99 
TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5507 TCGA-EJ-5509 TCGA-EJ-5511 TCGA-EJ-5514 
        7.53        14.70         5.98        36.03        25.91        23.80 
TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5531 TCGA-EJ-7115 TCGA-EJ-7123 
       27.91        39.29        37.91        23.80        26.99        48.99 
TCGA-EJ-7317 TCGA-EJ-7327 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7782 TCGA-EJ-7784 
        9.37         5.75         6.28         0.30         2.10         5.49 
TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7789 TCGA-G9-6333 TCGA-G9-6338 TCGA-G9-6351 
        2.60         1.71         2.30        63.29        54.21        39.95 
TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6369 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 
       33.14        27.02        27.98        33.34        36.46        22.16 
TCGA-HC-7078 TCGA-HC-7080 TCGA-HC-7213 TCGA-HC-7736 TCGA-HC-7744 TCGA-HC-7747 
        5.33         2.01         1.97         0.99         1.68         1.87 
TCGA-HC-7749 TCGA-HC-7821 TCGA-HC-A4ZV 
        2.01         1.84         0.76 

$`DEL PEAK  9(6Q15) WILD-TYPE`
TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5746 TCGA-CH-5750 
        6.97        22.06        12.99        13.94        24.03        12.99 
TCGA-CH-5752 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5768 
       30.97        44.02        12.00         1.02        23.01        24.03 
TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 
        2.04        12.99        15.95         9.96        32.02        33.01 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
       28.96        12.43        19.89        19.53        13.02        17.62 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5506 TCGA-EJ-5508 
       17.49        23.97         8.02        17.42        11.70        29.82 
TCGA-EJ-5510 TCGA-EJ-5512 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5521 TCGA-EJ-5522 
       24.23        25.71        34.88        25.74        27.68        46.13 
TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5532 
       27.42        25.97        18.64        13.05        41.82        29.92 
TCGA-EJ-5542 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7321 TCGA-EJ-7328 
       17.06        61.15         9.70         9.50         7.66         5.59 
TCGA-EJ-7781 TCGA-EJ-7783 TCGA-EJ-7785 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 
        5.56         4.31         8.48         7.13        17.29         1.41 
TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B 
        9.34         6.15        63.98        26.99        66.12         5.33 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6336 TCGA-G9-6342 TCGA-G9-6343 
        1.05        30.35        65.92        54.87        43.99        18.21 
TCGA-G9-6348 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 
       37.61        27.85        32.88        32.65        27.65        26.43 
TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 
        3.32        28.77        26.50        27.81        16.60        17.03 
TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-7519 TCGA-G9-7521 
       21.83        12.82        11.70        47.41        15.02        15.98 
TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 
       14.83        10.65        16.83         1.02         2.01        65.98 
TCGA-HC-7079 TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7230 TCGA-HC-7231 
        2.93         1.02         0.99         1.02         1.68         2.37 
TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7742 TCGA-HC-7748 TCGA-HC-7750 TCGA-HC-7752 
        2.07         1.74         1.48         2.04         1.12         3.22 
TCGA-HC-7818 TCGA-HC-8265 TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 
        1.48         2.04        65.92        64.08        62.43        66.02 
TCGA-J4-8198 
        3.22 

  DEL PEAK  9(6Q15) MUTATED DEL PEAK  9(6Q15) WILD-TYPE 
                       0.30                        0.99 
  DEL PEAK  9(6Q15) MUTATED DEL PEAK  9(6Q15) WILD-TYPE 
                      63.29                       66.12 
  DEL PEAK  9(6Q15) MUTATED DEL PEAK  9(6Q15) WILD-TYPE 
                       5.98                       17.03 
[1] "0.3 - 63.3 (6.0)"  "1.0 - 66.1 (17.0)"
                 TCGA-CH-5737                  TCGA-CH-5738 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
  "DEL PEAK  9(6Q15) MUTATED"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-CH-5761                  TCGA-CH-5762 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-CH-5767                  TCGA-CH-5768 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
  "DEL PEAK  9(6Q15) MUTATED"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
  "DEL PEAK  9(6Q15) MUTATED"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
  "DEL PEAK  9(6Q15) MUTATED"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
  "DEL PEAK  9(6Q15) MUTATED"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-EJ-8469 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-8470                  TCGA-EJ-8472 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-A46B                  TCGA-FC-7708 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-G9-6362                  TCGA-G9-6363 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "DEL PEAK  9(6Q15) MUTATED"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7075                  TCGA-HC-7077 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7078                  TCGA-HC-7079 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7080                  TCGA-HC-7209 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7212 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7213                  TCGA-HC-7230 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7231                  TCGA-HC-7736 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-HC-7737                  TCGA-HC-7740 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7742                  TCGA-HC-7744 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-HC-7747                  TCGA-HC-7748 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7749                  TCGA-HC-7750 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7752                  TCGA-HC-7818 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7821                  TCGA-HC-8265 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-A4ZV                  TCGA-HI-7168 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5737                  TCGA-CH-5738 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
  "DEL PEAK  9(6Q15) MUTATED"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-CH-5761                  TCGA-CH-5762 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-CH-5767                  TCGA-CH-5768 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
  "DEL PEAK  9(6Q15) MUTATED"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
  "DEL PEAK  9(6Q15) MUTATED"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
  "DEL PEAK  9(6Q15) MUTATED"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
  "DEL PEAK  9(6Q15) MUTATED"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-EJ-8469 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-8470                  TCGA-EJ-8472 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-A46B                  TCGA-FC-7708 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-G9-6362                  TCGA-G9-6363 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "DEL PEAK  9(6Q15) MUTATED"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7075                  TCGA-HC-7077 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7078                  TCGA-HC-7079 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7080                  TCGA-HC-7209 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7212 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7213                  TCGA-HC-7230 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7231                  TCGA-HC-7736 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-HC-7737                  TCGA-HC-7740 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7742                  TCGA-HC-7744 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-HC-7747                  TCGA-HC-7748 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7749                  TCGA-HC-7750 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7752                  TCGA-HC-7818 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7821                  TCGA-HC-8265 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-A4ZV                  TCGA-HI-7168 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5737                  TCGA-CH-5738 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5739                  TCGA-CH-5740 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-CH-5741                  TCGA-CH-5743 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5744                  TCGA-CH-5746 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5748                  TCGA-CH-5750 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5751                  TCGA-CH-5752 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5753                  TCGA-CH-5754 
  "DEL PEAK  9(6Q15) MUTATED"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-CH-5761                  TCGA-CH-5762 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5763                  TCGA-CH-5764 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5765                  TCGA-CH-5766 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-CH-5767                  TCGA-CH-5768 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5769                  TCGA-CH-5771 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5772                  TCGA-CH-5788 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-CH-5789                  TCGA-CH-5790 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-CH-5791                  TCGA-CH-5792 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-CH-5794                  TCGA-EJ-5494 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5495                  TCGA-EJ-5496 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5497                  TCGA-EJ-5498 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5499                  TCGA-EJ-5501 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5502                  TCGA-EJ-5503 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5504                  TCGA-EJ-5505 
  "DEL PEAK  9(6Q15) MUTATED"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-5506                  TCGA-EJ-5507 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-5508                  TCGA-EJ-5509 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-5510                  TCGA-EJ-5511 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-5512                  TCGA-EJ-5514 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-5515                  TCGA-EJ-5516 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5517                  TCGA-EJ-5518 
  "DEL PEAK  9(6Q15) MUTATED"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-5519                  TCGA-EJ-5521 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5522                  TCGA-EJ-5524 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5525                  TCGA-EJ-5526 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5527                  TCGA-EJ-5530 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5531                  TCGA-EJ-5532 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-5542                  TCGA-EJ-7115 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-7123                  TCGA-EJ-7125 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-7314                  TCGA-EJ-7315 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-7317                  TCGA-EJ-7321 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-7327                  TCGA-EJ-7328 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-7330                  TCGA-EJ-7331 
  "DEL PEAK  9(6Q15) MUTATED"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-7781                  TCGA-EJ-7782 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-7783                  TCGA-EJ-7784 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-7785                  TCGA-EJ-7786 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-7788                  TCGA-EJ-7789 
  "DEL PEAK  9(6Q15) MUTATED"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-EJ-7791                  TCGA-EJ-7792 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-7793                  TCGA-EJ-7794 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-7797                  TCGA-EJ-8469 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-8470                  TCGA-EJ-8472 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-EJ-A46B                  TCGA-FC-7708 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6329                  TCGA-G9-6332 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6333                  TCGA-G9-6336 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6338                  TCGA-G9-6342 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6343                  TCGA-G9-6348 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6351                  TCGA-G9-6353 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6356                  TCGA-G9-6361 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-G9-6362                  TCGA-G9-6363 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6364                  TCGA-G9-6365 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6366                  TCGA-G9-6367 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6369                  TCGA-G9-6370 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6371                  TCGA-G9-6373 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6377                  TCGA-G9-6378 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6384                  TCGA-G9-6385 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-6494                  TCGA-G9-6496 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-G9-6499                  TCGA-G9-7510 
  "DEL PEAK  9(6Q15) MUTATED"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-G9-7519                  TCGA-G9-7521 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-7522                  TCGA-G9-7523 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-G9-7525                  TCGA-H9-7775 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7075                  TCGA-HC-7077 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7078                  TCGA-HC-7079 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7080                  TCGA-HC-7209 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7211                  TCGA-HC-7212 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7213                  TCGA-HC-7230 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7231                  TCGA-HC-7736 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-HC-7737                  TCGA-HC-7740 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7742                  TCGA-HC-7744 
"DEL PEAK  9(6Q15) WILD-TYPE"   "DEL PEAK  9(6Q15) MUTATED" 
                 TCGA-HC-7747                  TCGA-HC-7748 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7749                  TCGA-HC-7750 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7752                  TCGA-HC-7818 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-7821                  TCGA-HC-8265 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HC-A4ZV                  TCGA-HI-7168 
  "DEL PEAK  9(6Q15) MUTATED" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HI-7169                  TCGA-HI-7170 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
                 TCGA-HI-7171                  TCGA-J4-8198 
"DEL PEAK  9(6Q15) WILD-TYPE" "DEL PEAK  9(6Q15) WILD-TYPE" 
[1] "hr=" "1"  
D30V2, continuous
                             vv
clus                          T2 T3 T4
  DEL PEAK  9(6Q15) MUTATED   21 28  2
  DEL PEAK  9(6Q15) WILD-TYPE 48 57  3
D30V3, multiclass
    clus
vv   DEL PEAK  9(6Q15) MUTATED DEL PEAK  9(6Q15) WILD-TYPE
  T2                        21                          48
  T3                        28                          57
  T4                         2                           3
D30V4, binary
                             cls
clus                           0  1
  DEL PEAK  9(6Q15) MUTATED   41  9
  DEL PEAK  9(6Q15) WILD-TYPE 85  6
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK  9(6Q15) MUTATED     41    9
  DEL PEAK  9(6Q15) WILD-TYPE   85    6
   clus
vv  DEL PEAK  9(6Q15) MUTATED DEL PEAK  9(6Q15) WILD-TYPE
  0                        41                          85
  1                         9                           6
                             vv
clus                          R0 R1 RX
  DEL PEAK  9(6Q15) MUTATED   36 12  0
  DEL PEAK  9(6Q15) WILD-TYPE 83 19  3
D30V5, multiclass
    clus
vv   DEL PEAK  9(6Q15) MUTATED DEL PEAK  9(6Q15) WILD-TYPE
  R0                        36                          83
  R1                        12                          19
  RX                         0                           3
D30V6, continuous

Clustering(31) Variable = DEL PEAK 10(7Q36.1) MUTATION ANALYSIS
D31V1, survival
                               sevent
clus2                             0   1
  DEL PEAK 10(7Q36.1) MUTATED     7   0
  DEL PEAK 10(7Q36.1) WILD-TYPE 152   1
  DEL PEAK 10(7Q36.1) MUTATED DEL PEAK 10(7Q36.1) WILD-TYPE 
                            7                           153 
  DEL PEAK 10(7Q36.1) MUTATED DEL PEAK 10(7Q36.1) WILD-TYPE 
                            0                             1 
$`DEL PEAK 10(7Q36.1) MUTATED`
TCGA-EJ-5495 TCGA-EJ-5521 TCGA-G9-6348 TCGA-G9-6366 TCGA-G9-6496 TCGA-HC-7752 
       19.89        27.68        37.61         3.32        33.34         3.22 
TCGA-HC-7821 
        1.84 

$`DEL PEAK 10(7Q36.1) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
        1.02         2.04         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 
       15.95        26.96         9.96        32.02        33.01         2.99 
TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 
       28.96        12.43        19.53        13.02        17.62        17.49 
TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 
       23.97         8.02        17.42         7.53        14.70        11.70 
TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 
        5.98        29.82        36.03        24.23        25.91        25.71 
TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 
       23.80        34.88        25.74        27.91        39.29        37.91 
TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 
       46.13        27.42        25.97        18.64        13.05        41.82 
TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 
       23.80        29.92        17.06        26.99        48.99        61.15 
TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 
        9.70         9.50         9.37         7.66         5.75         5.59 
TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 
        6.28         0.30         5.56         2.10         4.31         5.49 
TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 
        8.48         2.60         1.71         2.30         7.13        17.29 
TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-8472 
        1.41         9.34         6.15        63.98        26.99        66.12 
TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 
        5.33         1.05        30.35        65.92        63.29        54.87 
TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 
       54.21        43.99        18.21        39.95        27.85        32.88 
TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6367 
       33.14        27.02        32.65        27.65        26.43        28.77 
TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 
       27.98        26.50        27.81        16.60        17.03        21.83 
TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6499 TCGA-G9-7510 TCGA-G9-7519 
       12.82        11.70        47.41        36.46        22.16        15.02 
TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 
       15.98        14.83        10.65        16.83         1.02         2.01 
TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7211 
       65.98         5.33         2.93         2.01         1.02         0.99 
TCGA-HC-7212 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 
        1.02         1.97         1.68         2.37         0.99         2.07 
TCGA-HC-7740 TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7749 
        1.74         1.48         1.68         1.87         2.04         2.01 
TCGA-HC-7750 TCGA-HC-7818 TCGA-HC-8265 TCGA-HC-A4ZV TCGA-HI-7168 TCGA-HI-7169 
        1.12         1.48         2.04         0.76        65.92        64.08 
TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       62.43        66.02         3.22 

  DEL PEAK 10(7Q36.1) MUTATED DEL PEAK 10(7Q36.1) WILD-TYPE 
                         1.84                          0.30 
  DEL PEAK 10(7Q36.1) MUTATED DEL PEAK 10(7Q36.1) WILD-TYPE 
                        37.61                         66.12 
  DEL PEAK 10(7Q36.1) MUTATED DEL PEAK 10(7Q36.1) WILD-TYPE 
                        19.89                         15.02 
[1] "1.8 - 37.6 (19.9)" "0.3 - 66.1 (15.0)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "DEL PEAK 10(7Q36.1) MUTATED" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK 10(7Q36.1) WILD-TYPE"   "DEL PEAK 10(7Q36.1) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK 10(7Q36.1) WILD-TYPE"   "DEL PEAK 10(7Q36.1) MUTATED" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "DEL PEAK 10(7Q36.1) MUTATED" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK 10(7Q36.1) WILD-TYPE"   "DEL PEAK 10(7Q36.1) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
  "DEL PEAK 10(7Q36.1) MUTATED" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
  "DEL PEAK 10(7Q36.1) MUTATED" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "DEL PEAK 10(7Q36.1) MUTATED" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK 10(7Q36.1) WILD-TYPE"   "DEL PEAK 10(7Q36.1) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK 10(7Q36.1) WILD-TYPE"   "DEL PEAK 10(7Q36.1) MUTATED" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "DEL PEAK 10(7Q36.1) MUTATED" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK 10(7Q36.1) WILD-TYPE"   "DEL PEAK 10(7Q36.1) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
  "DEL PEAK 10(7Q36.1) MUTATED" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
  "DEL PEAK 10(7Q36.1) MUTATED" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "DEL PEAK 10(7Q36.1) MUTATED" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
"DEL PEAK 10(7Q36.1) WILD-TYPE"   "DEL PEAK 10(7Q36.1) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK 10(7Q36.1) WILD-TYPE"   "DEL PEAK 10(7Q36.1) MUTATED" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "DEL PEAK 10(7Q36.1) MUTATED" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK 10(7Q36.1) WILD-TYPE"   "DEL PEAK 10(7Q36.1) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
  "DEL PEAK 10(7Q36.1) MUTATED" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
  "DEL PEAK 10(7Q36.1) MUTATED" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK 10(7Q36.1) WILD-TYPE" "DEL PEAK 10(7Q36.1) WILD-TYPE" 
[1] "hr=" "1"  
D31V2, continuous
                               vv
clus                            T2 T3 T4
  DEL PEAK 10(7Q36.1) MUTATED    3  4  0
  DEL PEAK 10(7Q36.1) WILD-TYPE 66 81  5
D31V3, multiclass
    clus
vv   DEL PEAK 10(7Q36.1) MUTATED DEL PEAK 10(7Q36.1) WILD-TYPE
  T2                           3                            66
  T3                           4                            81
  T4                           0                             5
D31V4, binary
                               cls
clus                              0   1
  DEL PEAK 10(7Q36.1) MUTATED     4   2
  DEL PEAK 10(7Q36.1) WILD-TYPE 122  13
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 10(7Q36.1) MUTATED      4    2
  DEL PEAK 10(7Q36.1) WILD-TYPE  122   13
   clus
vv  DEL PEAK 10(7Q36.1) MUTATED DEL PEAK 10(7Q36.1) WILD-TYPE
  0                           4                           122
  1                           2                            13
                               vv
clus                             R0  R1  RX
  DEL PEAK 10(7Q36.1) MUTATED     5   1   0
  DEL PEAK 10(7Q36.1) WILD-TYPE 114  30   3
D31V5, multiclass
    clus
vv   DEL PEAK 10(7Q36.1) MUTATED DEL PEAK 10(7Q36.1) WILD-TYPE
  R0                           5                           114
  R1                           1                            30
  RX                           0                             3
D31V6, continuous

Clustering(32) Variable = DEL PEAK 11(8P21.3) MUTATION ANALYSIS
D32V1, survival
                               sevent
clus2                            0  1
  DEL PEAK 11(8P21.3) MUTATED   96  1
  DEL PEAK 11(8P21.3) WILD-TYPE 63  0
  DEL PEAK 11(8P21.3) MUTATED DEL PEAK 11(8P21.3) WILD-TYPE 
                           97                            63 
  DEL PEAK 11(8P21.3) MUTATED DEL PEAK 11(8P21.3) WILD-TYPE 
                            1                             0 
$`DEL PEAK 11(8P21.3) MUTATED`
TCGA-CH-5739 TCGA-CH-5741 TCGA-CH-5744 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
       22.06        12.99         1.97        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5764 TCGA-CH-5765 
        1.02         2.04         0.92        44.02         1.02        23.01 
TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5771 TCGA-CH-5788 TCGA-CH-5790 
        1.02        15.06        24.03        12.99        26.96        32.02 
TCGA-CH-5791 TCGA-CH-5792 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5499 
       33.01         2.99        19.89        19.53        13.02        17.49 
TCGA-EJ-5501 TCGA-EJ-5504 TCGA-EJ-5507 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 
       23.97         7.53         5.98        24.23        25.91        25.71 
TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5524 TCGA-EJ-5525 
       27.91        39.29        37.91        27.68        27.42        25.97 
TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 
       18.64        13.05        41.82        23.80        29.92        17.06 
TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7314 TCGA-EJ-7321 TCGA-EJ-7328 TCGA-EJ-7330 
       26.99        48.99         9.70         7.66         5.59         6.28 
TCGA-EJ-7781 TCGA-EJ-7783 TCGA-EJ-7788 TCGA-EJ-7789 TCGA-EJ-7797 TCGA-EJ-8469 
        5.56         4.31         1.71         2.30         6.15        63.98 
TCGA-EJ-8470 TCGA-EJ-8472 TCGA-FC-7708 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6338 
       26.99        66.12         1.05        65.92        63.29        54.21 
TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 
       43.99        18.21        33.14        27.02        32.65        27.65 
TCGA-G9-6366 TCGA-G9-6369 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6384 
        3.32        27.98        27.81        16.60        17.03        12.82 
TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 TCGA-G9-7521 TCGA-G9-7522 TCGA-H9-7775 
       47.41        33.34        22.16        15.98        14.83         1.02 
TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7213 TCGA-HC-7231 
       65.98         5.33         0.99         1.02         1.97         2.37 
TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7752 
        1.48         1.68         1.87         2.04         2.01         3.22 
TCGA-HC-7821 TCGA-HC-8265 TCGA-HC-A4ZV TCGA-HI-7168 TCGA-HI-7170 TCGA-HI-7171 
        1.84         2.04         0.76        65.92        62.43        66.02 
TCGA-J4-8198 
        3.22 

$`DEL PEAK 11(8P21.3) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5740 TCGA-CH-5743 TCGA-CH-5746 TCGA-CH-5748 
        2.99         6.97         1.02        13.94        24.03         1.02 
TCGA-CH-5763 TCGA-CH-5769 TCGA-CH-5772 TCGA-CH-5789 TCGA-CH-5794 TCGA-EJ-5494 
       12.00         2.04        15.95         9.96        28.96        12.43 
TCGA-EJ-5498 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5508 
       17.62         8.02        17.42        14.70        11.70        29.82 
TCGA-EJ-5509 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5522 TCGA-EJ-7125 
       36.03        23.80        34.88        25.74        46.13        61.15 
TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7327 TCGA-EJ-7331 TCGA-EJ-7782 TCGA-EJ-7784 
        9.50         9.37         5.75         0.30         2.10         5.49 
TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 
        8.48         2.60         7.13        17.29         1.41         9.34 
TCGA-EJ-A46B TCGA-G9-6329 TCGA-G9-6336 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 
        5.33        30.35        54.87        37.61        39.95        27.85 
TCGA-G9-6356 TCGA-G9-6365 TCGA-G9-6367 TCGA-G9-6370 TCGA-G9-6378 TCGA-G9-6385 
       32.88        26.43        28.77        26.50        21.83        11.70 
TCGA-G9-6499 TCGA-G9-7519 TCGA-G9-7523 TCGA-G9-7525 TCGA-HC-7075 TCGA-HC-7079 
       36.46        15.02        10.65        16.83         2.01         2.93 
TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7230 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 
        2.01         1.02         1.68         0.99         2.07         1.74 
TCGA-HC-7750 TCGA-HC-7818 TCGA-HI-7169 
        1.12         1.48        64.08 

  DEL PEAK 11(8P21.3) MUTATED DEL PEAK 11(8P21.3) WILD-TYPE 
                         0.76                          0.30 
  DEL PEAK 11(8P21.3) MUTATED DEL PEAK 11(8P21.3) WILD-TYPE 
                        66.12                         64.08 
  DEL PEAK 11(8P21.3) MUTATED DEL PEAK 11(8P21.3) WILD-TYPE 
                        17.49                         11.70 
[1] "0.8 - 66.1 (17.5)" "0.3 - 64.1 (11.7)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5753                    TCGA-CH-5754 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5761                    TCGA-CH-5762 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5765                    TCGA-CH-5766 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5767                    TCGA-CH-5768 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-6333                    TCGA-G9-6336 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-6343                    TCGA-G9-6348 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-6362                    TCGA-G9-6363 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-6364                    TCGA-G9-6365 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-6377                    TCGA-G9-6378 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HC-7078                    TCGA-HC-7079 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HC-7213                    TCGA-HC-7230 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7748 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HC-7749                    TCGA-HC-7750 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5753                    TCGA-CH-5754 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5761                    TCGA-CH-5762 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5765                    TCGA-CH-5766 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5767                    TCGA-CH-5768 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-6333                    TCGA-G9-6336 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-6343                    TCGA-G9-6348 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-6362                    TCGA-G9-6363 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-6364                    TCGA-G9-6365 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-6377                    TCGA-G9-6378 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HC-7078                    TCGA-HC-7079 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HC-7213                    TCGA-HC-7230 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7748 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HC-7749                    TCGA-HC-7750 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5753                    TCGA-CH-5754 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5761                    TCGA-CH-5762 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5765                    TCGA-CH-5766 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5767                    TCGA-CH-5768 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5769                    TCGA-CH-5771 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5791                    TCGA-CH-5792 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-6333                    TCGA-G9-6336 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-6343                    TCGA-G9-6348 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-6362                    TCGA-G9-6363 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-6364                    TCGA-G9-6365 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-6377                    TCGA-G9-6378 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HC-7078                    TCGA-HC-7079 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HC-7213                    TCGA-HC-7230 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK 11(8P21.3) WILD-TYPE" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HC-7747                    TCGA-HC-7748 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HC-7749                    TCGA-HC-7750 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
  "DEL PEAK 11(8P21.3) MUTATED" "DEL PEAK 11(8P21.3) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK 11(8P21.3) WILD-TYPE"   "DEL PEAK 11(8P21.3) MUTATED" 
                   TCGA-HI-7171                    TCGA-J4-8198 
  "DEL PEAK 11(8P21.3) MUTATED"   "DEL PEAK 11(8P21.3) MUTATED" 
[1] "hr=" "1"  
D32V2, continuous
                               vv
clus                            T2 T3 T4
  DEL PEAK 11(8P21.3) MUTATED   31 62  4
  DEL PEAK 11(8P21.3) WILD-TYPE 38 23  1
D32V3, multiclass
    clus
vv   DEL PEAK 11(8P21.3) MUTATED DEL PEAK 11(8P21.3) WILD-TYPE
  T2                          31                            38
  T3                          62                            23
  T4                           4                             1
D32V4, binary
                               cls
clus                             0  1
  DEL PEAK 11(8P21.3) MUTATED   75 13
  DEL PEAK 11(8P21.3) WILD-TYPE 51  2
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 11(8P21.3) MUTATED     75   13
  DEL PEAK 11(8P21.3) WILD-TYPE   51    2
   clus
vv  DEL PEAK 11(8P21.3) MUTATED DEL PEAK 11(8P21.3) WILD-TYPE
  0                          75                            51
  1                          13                             2
                               vv
clus                            R0 R1 RX
  DEL PEAK 11(8P21.3) MUTATED   71 18  2
  DEL PEAK 11(8P21.3) WILD-TYPE 48 13  1
D32V5, multiclass
    clus
vv   DEL PEAK 11(8P21.3) MUTATED DEL PEAK 11(8P21.3) WILD-TYPE
  R0                          71                            48
  R1                          18                            13
  RX                           2                             1
D32V6, continuous

Clustering(33) Variable = DEL PEAK 12(8P11.21) MUTATION ANALYSIS
D33V1, survival
                                sevent
clus2                              0   1
  DEL PEAK 12(8P11.21) MUTATED    54   1
  DEL PEAK 12(8P11.21) WILD-TYPE 105   0
  DEL PEAK 12(8P11.21) MUTATED DEL PEAK 12(8P11.21) WILD-TYPE 
                            55                            105 
  DEL PEAK 12(8P11.21) MUTATED DEL PEAK 12(8P11.21) WILD-TYPE 
                             1                              0 
$`DEL PEAK 12(8P11.21) MUTATED`
TCGA-CH-5739 TCGA-CH-5744 TCGA-CH-5750 TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 
       22.06         1.97        12.99         1.02         2.04         0.92 
TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5768 TCGA-CH-5771 TCGA-CH-5790 
        1.02        23.01         1.02        24.03        12.99        32.02 
TCGA-CH-5794 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5507 TCGA-EJ-5510 TCGA-EJ-5517 
       28.96        17.49        23.97         5.98        24.23        27.91 
TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5532 TCGA-EJ-5542 
       27.68        46.13        13.05        41.82        29.92        17.06 
TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7330 TCGA-EJ-7783 TCGA-EJ-7789 TCGA-EJ-8469 
       26.99        48.99         6.28         4.31         2.30        63.98 
TCGA-EJ-8470 TCGA-EJ-8472 TCGA-FC-7708 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6342 
       26.99        66.12         1.05        65.92        63.29        43.99 
TCGA-G9-6343 TCGA-G9-6361 TCGA-G9-6364 TCGA-G9-6369 TCGA-G9-6377 TCGA-G9-6494 
       18.21        33.14        27.65        27.98        17.03        47.41 
TCGA-G9-7510 TCGA-G9-7521 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7212 TCGA-HC-7231 
       22.16        15.98        65.98         5.33         1.02         2.37 
TCGA-HC-7742 TCGA-HC-7748 TCGA-HC-7752 TCGA-HC-7821 TCGA-HI-7168 TCGA-HI-7170 
        1.48         2.04         3.22         1.84        65.92        62.43 
TCGA-HI-7171 
       66.02 

$`DEL PEAK 12(8P11.21) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5746 
        2.99         6.97         1.02        12.99        13.94        24.03 
TCGA-CH-5748 TCGA-CH-5751 TCGA-CH-5752 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5767 
        1.02        35.01        30.97        44.02        12.00        15.06 
TCGA-CH-5769 TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5791 TCGA-CH-5792 
        2.04        15.95        26.96         9.96        33.01         2.99 
TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5502 
       12.43        19.89        19.53        13.02        17.62         8.02 
TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5508 TCGA-EJ-5509 
       17.42         7.53        14.70        11.70        29.82        36.03 
TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5518 
       25.91        25.71        23.80        34.88        25.74        39.29 
TCGA-EJ-5519 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5531 TCGA-EJ-7125 
       37.91        27.42        25.97        18.64        23.80        61.15 
TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 
        9.70         9.50         9.37         7.66         5.75         5.59 
TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 
        0.30         5.56         2.10         5.49         8.48         2.60 
TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 
        1.71         7.13        17.29         1.41         9.34         6.15 
TCGA-EJ-A46B TCGA-G9-6329 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6348 TCGA-G9-6351 
        5.33        30.35        54.87        54.21        37.61        39.95 
TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6365 TCGA-G9-6366 
       27.85        32.88        27.02        32.65        26.43         3.32 
TCGA-G9-6367 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6378 TCGA-G9-6384 
       28.77        26.50        27.81        16.60        21.83        12.82 
TCGA-G9-6385 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7519 TCGA-G9-7522 TCGA-G9-7523 
       11.70        33.34        36.46        15.02        14.83        10.65 
TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 
       16.83         1.02         2.01         2.93         2.01         1.02 
TCGA-HC-7211 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 
        0.99         1.97         1.68         0.99         2.07         1.74 
TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7818 TCGA-HC-8265 
        1.68         1.87         2.01         1.12         1.48         2.04 
TCGA-HC-A4ZV TCGA-HI-7169 TCGA-J4-8198 
        0.76        64.08         3.22 

  DEL PEAK 12(8P11.21) MUTATED DEL PEAK 12(8P11.21) WILD-TYPE 
                          0.92                           0.30 
  DEL PEAK 12(8P11.21) MUTATED DEL PEAK 12(8P11.21) WILD-TYPE 
                         66.12                          64.08 
  DEL PEAK 12(8P11.21) MUTATED DEL PEAK 12(8P11.21) WILD-TYPE 
                         22.16                          12.82 
[1] "0.9 - 66.1 (22.2)" "0.3 - 64.1 (12.8)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 12(8P11.21) MUTATED"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
  "DEL PEAK 12(8P11.21) MUTATED"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 12(8P11.21) MUTATED"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 12(8P11.21) MUTATED"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
  "DEL PEAK 12(8P11.21) MUTATED"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
  "DEL PEAK 12(8P11.21) MUTATED"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-G9-6333                     TCGA-G9-6336 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-HC-7078                     TCGA-HC-7079 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 12(8P11.21) MUTATED"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
  "DEL PEAK 12(8P11.21) MUTATED"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 12(8P11.21) MUTATED"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 12(8P11.21) MUTATED"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
  "DEL PEAK 12(8P11.21) MUTATED"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
  "DEL PEAK 12(8P11.21) MUTATED"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-G9-6333                     TCGA-G9-6336 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-HC-7078                     TCGA-HC-7079 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 12(8P11.21) MUTATED"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
  "DEL PEAK 12(8P11.21) MUTATED"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 12(8P11.21) MUTATED"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 12(8P11.21) MUTATED"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
  "DEL PEAK 12(8P11.21) MUTATED"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
  "DEL PEAK 12(8P11.21) MUTATED"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-G9-6333                     TCGA-G9-6336 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-HC-7078                     TCGA-HC-7079 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK 12(8P11.21) WILD-TYPE" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 12(8P11.21) WILD-TYPE"   "DEL PEAK 12(8P11.21) MUTATED" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 12(8P11.21) MUTATED" "DEL PEAK 12(8P11.21) WILD-TYPE" 
[1] "hr=" "1"  
D33V2, continuous
                                vv
clus                             T2 T3 T4
  DEL PEAK 12(8P11.21) MUTATED   20 34  1
  DEL PEAK 12(8P11.21) WILD-TYPE 49 51  4
D33V3, multiclass
    clus
vv   DEL PEAK 12(8P11.21) MUTATED DEL PEAK 12(8P11.21) WILD-TYPE
  T2                           20                             49
  T3                           34                             51
  T4                            1                              4
D33V4, binary
                                cls
clus                              0  1
  DEL PEAK 12(8P11.21) MUTATED   45  6
  DEL PEAK 12(8P11.21) WILD-TYPE 81  9
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 12(8P11.21) MUTATED     45    6
  DEL PEAK 12(8P11.21) WILD-TYPE   81    9
   clus
vv  DEL PEAK 12(8P11.21) MUTATED DEL PEAK 12(8P11.21) WILD-TYPE
  0                           45                             81
  1                            6                              9
                                vv
clus                             R0 R1 RX
  DEL PEAK 12(8P11.21) MUTATED   45  5  2
  DEL PEAK 12(8P11.21) WILD-TYPE 74 26  1
D33V5, multiclass
    clus
vv   DEL PEAK 12(8P11.21) MUTATED DEL PEAK 12(8P11.21) WILD-TYPE
  R0                           45                             74
  R1                            5                             26
  RX                            2                              1
D33V6, continuous

Clustering(34) Variable = DEL PEAK 13(9P22.3) MUTATION ANALYSIS
D34V1, survival
                               sevent
clus2                             0   1
  DEL PEAK 13(9P22.3) MUTATED    14   0
  DEL PEAK 13(9P22.3) WILD-TYPE 145   1
  DEL PEAK 13(9P22.3) MUTATED DEL PEAK 13(9P22.3) WILD-TYPE 
                           14                           146 
  DEL PEAK 13(9P22.3) MUTATED DEL PEAK 13(9P22.3) WILD-TYPE 
                            0                             1 
$`DEL PEAK 13(9P22.3) MUTATED`
TCGA-CH-5746 TCGA-CH-5751 TCGA-CH-5769 TCGA-EJ-5507 TCGA-EJ-5517 TCGA-EJ-5519 
       24.03        35.01         2.04         5.98        27.91        37.91 
TCGA-EJ-5521 TCGA-EJ-7781 TCGA-EJ-7784 TCGA-G9-6377 TCGA-G9-7521 TCGA-HC-7213 
       27.68         5.56         5.49        17.03        15.98         1.97 
TCGA-HC-7821 TCGA-HI-7168 
        1.84        65.92 

$`DEL PEAK 13(9P22.3) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5753 TCGA-CH-5754 
        1.97         1.02        12.99        30.97         1.02         2.04 
TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5766 
        0.92        44.02        12.00         1.02        23.01         1.02 
TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 
       15.06        24.03        12.99        15.95        26.96         9.96 
TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 
       32.02        33.01         2.99        28.96        12.43        19.89 
TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 
       19.53        13.02        17.62        17.49        23.97         8.02 
TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5508 TCGA-EJ-5509 
       17.42         7.53        14.70        11.70        29.82        36.03 
TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 
       24.23        25.91        25.71        23.80        34.88        25.74 
TCGA-EJ-5518 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 
       39.29        46.13        27.42        25.97        18.64        13.05 
TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 
       41.82        23.80        29.92        17.06        26.99        48.99 
TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 
       61.15         9.70         9.50         9.37         7.66         5.75 
TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7785 
        5.59         6.28         0.30         2.10         4.31         8.48 
TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 
        2.60         1.71         2.30         7.13        17.29         1.41 
TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B 
        9.34         6.15        63.98        26.99        66.12         5.33 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 
        1.05        30.35        65.92        63.29        54.87        54.21 
TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 
       43.99        18.21        37.61        39.95        27.85        32.88 
TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 
       33.14        27.02        32.65        27.65        26.43         3.32 
TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6378 
       28.77        27.98        26.50        27.81        16.60        21.83 
TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 
       12.82        11.70        47.41        33.34        36.46        22.16 
TCGA-G9-7519 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 
       15.02        14.83        10.65        16.83         1.02         2.01 
TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7211 
       65.98         5.33         2.93         2.01         1.02         0.99 
TCGA-HC-7212 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 
        1.02         1.68         2.37         0.99         2.07         1.74 
TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7750 
        1.48         1.68         1.87         2.04         2.01         1.12 
TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-8265 TCGA-HC-A4ZV TCGA-HI-7169 TCGA-HI-7170 
        3.22         1.48         2.04         0.76        64.08        62.43 
TCGA-HI-7171 TCGA-J4-8198 
       66.02         3.22 

  DEL PEAK 13(9P22.3) MUTATED DEL PEAK 13(9P22.3) WILD-TYPE 
                         1.84                          0.30 
  DEL PEAK 13(9P22.3) MUTATED DEL PEAK 13(9P22.3) WILD-TYPE 
                        65.92                         66.12 
  DEL PEAK 13(9P22.3) MUTATED DEL PEAK 13(9P22.3) WILD-TYPE 
                       16.505                        14.925 
[1] "1.8 - 65.9 (16.5)" "0.3 - 66.1 (14.9)"
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK 13(9P22.3) WILD-TYPE"   "DEL PEAK 13(9P22.3) MUTATED" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK 13(9P22.3) MUTATED" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
  "DEL PEAK 13(9P22.3) MUTATED" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK 13(9P22.3) WILD-TYPE"   "DEL PEAK 13(9P22.3) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
  "DEL PEAK 13(9P22.3) MUTATED" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "DEL PEAK 13(9P22.3) MUTATED"   "DEL PEAK 13(9P22.3) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
  "DEL PEAK 13(9P22.3) MUTATED" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK 13(9P22.3) WILD-TYPE"   "DEL PEAK 13(9P22.3) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
  "DEL PEAK 13(9P22.3) MUTATED" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK 13(9P22.3) WILD-TYPE"   "DEL PEAK 13(9P22.3) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
  "DEL PEAK 13(9P22.3) MUTATED" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
  "DEL PEAK 13(9P22.3) MUTATED" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"DEL PEAK 13(9P22.3) WILD-TYPE"   "DEL PEAK 13(9P22.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK 13(9P22.3) WILD-TYPE"   "DEL PEAK 13(9P22.3) MUTATED" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK 13(9P22.3) MUTATED" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
  "DEL PEAK 13(9P22.3) MUTATED" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK 13(9P22.3) WILD-TYPE"   "DEL PEAK 13(9P22.3) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
  "DEL PEAK 13(9P22.3) MUTATED" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "DEL PEAK 13(9P22.3) MUTATED"   "DEL PEAK 13(9P22.3) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
  "DEL PEAK 13(9P22.3) MUTATED" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK 13(9P22.3) WILD-TYPE"   "DEL PEAK 13(9P22.3) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
  "DEL PEAK 13(9P22.3) MUTATED" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK 13(9P22.3) WILD-TYPE"   "DEL PEAK 13(9P22.3) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
  "DEL PEAK 13(9P22.3) MUTATED" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
  "DEL PEAK 13(9P22.3) MUTATED" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"DEL PEAK 13(9P22.3) WILD-TYPE"   "DEL PEAK 13(9P22.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5737                    TCGA-CH-5738 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5739                    TCGA-CH-5740 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5741                    TCGA-CH-5743 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5744                    TCGA-CH-5746 
"DEL PEAK 13(9P22.3) WILD-TYPE"   "DEL PEAK 13(9P22.3) MUTATED" 
                   TCGA-CH-5748                    TCGA-CH-5750 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5751                    TCGA-CH-5752 
  "DEL PEAK 13(9P22.3) MUTATED" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5753                    TCGA-CH-5754 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5761                    TCGA-CH-5762 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5763                    TCGA-CH-5764 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5765                    TCGA-CH-5766 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5767                    TCGA-CH-5768 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5769                    TCGA-CH-5771 
  "DEL PEAK 13(9P22.3) MUTATED" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5772                    TCGA-CH-5788 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5789                    TCGA-CH-5790 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5791                    TCGA-CH-5792 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-CH-5794                    TCGA-EJ-5494 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5495                    TCGA-EJ-5496 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5497                    TCGA-EJ-5498 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5499                    TCGA-EJ-5501 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5502                    TCGA-EJ-5503 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5504                    TCGA-EJ-5505 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5506                    TCGA-EJ-5507 
"DEL PEAK 13(9P22.3) WILD-TYPE"   "DEL PEAK 13(9P22.3) MUTATED" 
                   TCGA-EJ-5508                    TCGA-EJ-5509 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5510                    TCGA-EJ-5511 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5512                    TCGA-EJ-5514 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5515                    TCGA-EJ-5516 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5517                    TCGA-EJ-5518 
  "DEL PEAK 13(9P22.3) MUTATED" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5519                    TCGA-EJ-5521 
  "DEL PEAK 13(9P22.3) MUTATED"   "DEL PEAK 13(9P22.3) MUTATED" 
                   TCGA-EJ-5522                    TCGA-EJ-5524 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5525                    TCGA-EJ-5526 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5527                    TCGA-EJ-5530 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5531                    TCGA-EJ-5532 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-5542                    TCGA-EJ-7115 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7123                    TCGA-EJ-7125 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7314                    TCGA-EJ-7315 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7317                    TCGA-EJ-7321 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7327                    TCGA-EJ-7328 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7330                    TCGA-EJ-7331 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7781                    TCGA-EJ-7782 
  "DEL PEAK 13(9P22.3) MUTATED" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7783                    TCGA-EJ-7784 
"DEL PEAK 13(9P22.3) WILD-TYPE"   "DEL PEAK 13(9P22.3) MUTATED" 
                   TCGA-EJ-7785                    TCGA-EJ-7786 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7788                    TCGA-EJ-7789 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7791                    TCGA-EJ-7792 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7793                    TCGA-EJ-7794 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-7797                    TCGA-EJ-8469 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-8470                    TCGA-EJ-8472 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-EJ-A46B                    TCGA-FC-7708 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6329                    TCGA-G9-6332 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6333                    TCGA-G9-6336 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6338                    TCGA-G9-6342 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6343                    TCGA-G9-6348 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6351                    TCGA-G9-6353 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6356                    TCGA-G9-6361 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6362                    TCGA-G9-6363 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6364                    TCGA-G9-6365 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6366                    TCGA-G9-6367 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6369                    TCGA-G9-6370 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6371                    TCGA-G9-6373 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6377                    TCGA-G9-6378 
  "DEL PEAK 13(9P22.3) MUTATED" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6384                    TCGA-G9-6385 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6494                    TCGA-G9-6496 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-6499                    TCGA-G9-7510 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-7519                    TCGA-G9-7521 
"DEL PEAK 13(9P22.3) WILD-TYPE"   "DEL PEAK 13(9P22.3) MUTATED" 
                   TCGA-G9-7522                    TCGA-G9-7523 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-G9-7525                    TCGA-H9-7775 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7075                    TCGA-HC-7077 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7078                    TCGA-HC-7079 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7080                    TCGA-HC-7209 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7211                    TCGA-HC-7212 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7213                    TCGA-HC-7230 
  "DEL PEAK 13(9P22.3) MUTATED" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7231                    TCGA-HC-7736 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7737                    TCGA-HC-7740 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7742                    TCGA-HC-7744 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7747                    TCGA-HC-7748 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7749                    TCGA-HC-7750 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7752                    TCGA-HC-7818 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-7821                    TCGA-HC-8265 
  "DEL PEAK 13(9P22.3) MUTATED" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HC-A4ZV                    TCGA-HI-7168 
"DEL PEAK 13(9P22.3) WILD-TYPE"   "DEL PEAK 13(9P22.3) MUTATED" 
                   TCGA-HI-7169                    TCGA-HI-7170 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
                   TCGA-HI-7171                    TCGA-J4-8198 
"DEL PEAK 13(9P22.3) WILD-TYPE" "DEL PEAK 13(9P22.3) WILD-TYPE" 
[1] "hr=" "1"  
D34V2, continuous
                               vv
clus                            T2 T3 T4
  DEL PEAK 13(9P22.3) MUTATED    5  8  1
  DEL PEAK 13(9P22.3) WILD-TYPE 64 77  4
D34V3, multiclass
    clus
vv   DEL PEAK 13(9P22.3) MUTATED DEL PEAK 13(9P22.3) WILD-TYPE
  T2                           5                            64
  T3                           8                            77
  T4                           1                             4
D34V4, binary
                               cls
clus                              0   1
  DEL PEAK 13(9P22.3) MUTATED     9   5
  DEL PEAK 13(9P22.3) WILD-TYPE 117  10
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 13(9P22.3) MUTATED      9    5
  DEL PEAK 13(9P22.3) WILD-TYPE  117   10
   clus
vv  DEL PEAK 13(9P22.3) MUTATED DEL PEAK 13(9P22.3) WILD-TYPE
  0                           9                           117
  1                           5                            10
                               vv
clus                             R0  R1  RX
  DEL PEAK 13(9P22.3) MUTATED    10   3   0
  DEL PEAK 13(9P22.3) WILD-TYPE 109  28   3
D34V5, multiclass
    clus
vv   DEL PEAK 13(9P22.3) MUTATED DEL PEAK 13(9P22.3) WILD-TYPE
  R0                          10                           109
  R1                           3                            28
  RX                           0                             3
D34V6, continuous

Clustering(35) Variable = DEL PEAK 14(10Q23.31) MUTATION ANALYSIS
D35V1, survival
                                 sevent
clus2                               0   1
  DEL PEAK 14(10Q23.31) MUTATED    58   1
  DEL PEAK 14(10Q23.31) WILD-TYPE 101   0
  DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE 
                             59                             101 
  DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE 
                              1                               0 
$`DEL PEAK 14(10Q23.31) MUTATED`
TCGA-CH-5737 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5744 TCGA-CH-5751 TCGA-CH-5754 
        2.99         1.02        12.99         1.97        35.01         2.04 
TCGA-CH-5766 TCGA-CH-5769 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5794 TCGA-EJ-5495 
        1.02         2.04        32.02        33.01        28.96        19.89 
TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5504 TCGA-EJ-5507 TCGA-EJ-5510 TCGA-EJ-5514 
       17.49        23.97         7.53         5.98        24.23        23.80 
TCGA-EJ-5516 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 
       25.74        39.29        37.91        27.68        46.13        27.42 
TCGA-EJ-5527 TCGA-EJ-5542 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7327 TCGA-EJ-7788 
       13.05        17.06         9.70         9.50         5.75         1.71 
TCGA-EJ-8469 TCGA-FC-7708 TCGA-G9-6332 TCGA-G9-6342 TCGA-G9-6348 TCGA-G9-6356 
       63.98         1.05        65.92        43.99        37.61        32.88 
TCGA-G9-6361 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6499 
       33.14        32.65        27.65        16.60        17.03        36.46 
TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7525 TCGA-HC-7077 TCGA-HC-7209 TCGA-HC-7212 
       15.98        14.83        16.83        65.98         1.02         1.02 
TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7737 TCGA-HC-7742 TCGA-HC-7744 
        1.97         1.68         2.37         2.07         1.48         1.68 
TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-8265 TCGA-HI-7168 TCGA-HI-7171 
        2.04         2.01         2.04        65.92        66.02 

$`DEL PEAK 14(10Q23.31) WILD-TYPE`
TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5743 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 
        6.97        22.06        13.94        24.03         1.02        12.99 
TCGA-CH-5752 TCGA-CH-5753 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 
       30.97         1.02         0.92        44.02        12.00         1.02 
TCGA-CH-5765 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5788 
       23.01        15.06        24.03        12.99        15.95        26.96 
TCGA-CH-5789 TCGA-CH-5792 TCGA-EJ-5494 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 
        9.96         2.99        12.43        19.53        13.02        17.62 
TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5508 TCGA-EJ-5509 
        8.02        17.42        14.70        11.70        29.82        36.03 
TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5515 TCGA-EJ-5517 TCGA-EJ-5525 TCGA-EJ-5526 
       25.91        25.71        34.88        27.91        25.97        18.64 
TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 
       41.82        23.80        29.92        26.99        48.99        61.15 
TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 
        9.37         7.66         5.59         6.28         0.30         5.56 
TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7789 
        2.10         4.31         5.49         8.48         2.60         2.30 
TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8470 
        7.13        17.29         1.41         9.34         6.15        26.99 
TCGA-EJ-8472 TCGA-EJ-A46B TCGA-G9-6329 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 
       66.12         5.33        30.35        63.29        54.87        54.21 
TCGA-G9-6343 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6362 TCGA-G9-6365 TCGA-G9-6366 
       18.21        39.95        27.85        27.02        26.43         3.32 
TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6378 TCGA-G9-6384 
       28.77        27.98        26.50        27.81        21.83        12.82 
TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7523 
       11.70        47.41        33.34        22.16        15.02        10.65 
TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 
        1.02         2.01         5.33         2.93         2.01         0.99 
TCGA-HC-7736 TCGA-HC-7740 TCGA-HC-7747 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 
        0.99         1.74         1.87         1.12         3.22         1.48 
TCGA-HC-7821 TCGA-HC-A4ZV TCGA-HI-7169 TCGA-HI-7170 TCGA-J4-8198 
        1.84         0.76        64.08        62.43         3.22 

  DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE 
                           1.02                            0.30 
  DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE 
                          66.02                           66.12 
  DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE 
                          16.83                           13.94 
[1] "1.0 - 66.0 (16.8)" "0.3 - 66.1 (13.9)"
                     TCGA-CH-5737                      TCGA-CH-5738 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-CH-5741                      TCGA-CH-5743 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5751                      TCGA-CH-5752 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-CH-5761                      TCGA-CH-5762 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5765                      TCGA-CH-5766 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5769                      TCGA-CH-5771 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5772                      TCGA-CH-5788 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-CH-5791                      TCGA-CH-5792 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7797                      TCGA-EJ-8469 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-8470                      TCGA-EJ-8472 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-A46B                      TCGA-FC-7708 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-6329                      TCGA-G9-6332 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-6364                      TCGA-G9-6365 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-6377                      TCGA-G9-6378 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-7519                      TCGA-G9-7521 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-7522                      TCGA-G9-7523 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7075                      TCGA-HC-7077 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HC-7078                      TCGA-HC-7079 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7080                      TCGA-HC-7209 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HC-7211                      TCGA-HC-7212 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HC-7213                      TCGA-HC-7230 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HC-7231                      TCGA-HC-7736 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7737                      TCGA-HC-7740 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7742                      TCGA-HC-7744 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HC-7747                      TCGA-HC-7748 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HC-7749                      TCGA-HC-7750 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7752                      TCGA-HC-7818 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7821                      TCGA-HC-8265 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HC-A4ZV                      TCGA-HI-7168 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5737                      TCGA-CH-5738 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-CH-5741                      TCGA-CH-5743 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5751                      TCGA-CH-5752 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-CH-5761                      TCGA-CH-5762 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5765                      TCGA-CH-5766 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5769                      TCGA-CH-5771 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5772                      TCGA-CH-5788 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-CH-5791                      TCGA-CH-5792 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7797                      TCGA-EJ-8469 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-8470                      TCGA-EJ-8472 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-A46B                      TCGA-FC-7708 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-6329                      TCGA-G9-6332 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-6364                      TCGA-G9-6365 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-6377                      TCGA-G9-6378 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-7519                      TCGA-G9-7521 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-7522                      TCGA-G9-7523 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7075                      TCGA-HC-7077 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HC-7078                      TCGA-HC-7079 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7080                      TCGA-HC-7209 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HC-7211                      TCGA-HC-7212 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HC-7213                      TCGA-HC-7230 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HC-7231                      TCGA-HC-7736 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7737                      TCGA-HC-7740 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7742                      TCGA-HC-7744 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HC-7747                      TCGA-HC-7748 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HC-7749                      TCGA-HC-7750 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7752                      TCGA-HC-7818 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7821                      TCGA-HC-8265 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HC-A4ZV                      TCGA-HI-7168 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5737                      TCGA-CH-5738 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-CH-5741                      TCGA-CH-5743 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5751                      TCGA-CH-5752 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-CH-5761                      TCGA-CH-5762 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5765                      TCGA-CH-5766 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5769                      TCGA-CH-5771 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5772                      TCGA-CH-5788 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-CH-5791                      TCGA-CH-5792 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-7797                      TCGA-EJ-8469 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EJ-8470                      TCGA-EJ-8472 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EJ-A46B                      TCGA-FC-7708 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-6329                      TCGA-G9-6332 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-6364                      TCGA-G9-6365 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-6377                      TCGA-G9-6378 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-7519                      TCGA-G9-7521 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-G9-7522                      TCGA-G9-7523 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7075                      TCGA-HC-7077 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HC-7078                      TCGA-HC-7079 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7080                      TCGA-HC-7209 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HC-7211                      TCGA-HC-7212 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HC-7213                      TCGA-HC-7230 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HC-7231                      TCGA-HC-7736 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7737                      TCGA-HC-7740 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7742                      TCGA-HC-7744 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HC-7747                      TCGA-HC-7748 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HC-7749                      TCGA-HC-7750 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7752                      TCGA-HC-7818 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-HC-7821                      TCGA-HC-8265 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HC-A4ZV                      TCGA-HI-7168 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
[1] "hr="     "1.6e+09"
D35V2, continuous
                                 vv
clus                              T2 T3 T4
  DEL PEAK 14(10Q23.31) MUTATED   18 38  3
  DEL PEAK 14(10Q23.31) WILD-TYPE 51 47  2
D35V3, multiclass
    clus
vv   DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE
  T2                            18                              51
  T3                            38                              47
  T4                             3                               2
D35V4, binary
                                 cls
clus                               0  1
  DEL PEAK 14(10Q23.31) MUTATED   45 10
  DEL PEAK 14(10Q23.31) WILD-TYPE 81  5
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 14(10Q23.31) MUTATED     45   10
  DEL PEAK 14(10Q23.31) WILD-TYPE   81    5
   clus
vv  DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE
  0                            45                              81
  1                            10                               5
                                 vv
clus                              R0 R1 RX
  DEL PEAK 14(10Q23.31) MUTATED   44 12  2
  DEL PEAK 14(10Q23.31) WILD-TYPE 75 19  1
D35V5, multiclass
    clus
vv   DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE
  R0                            44                              75
  R1                            12                              19
  RX                             2                               1
D35V6, continuous

Clustering(36) Variable = DEL PEAK 15(11Q23.2) MUTATION ANALYSIS
D36V1, survival
                                sevent
clus2                              0   1
  DEL PEAK 15(11Q23.2) MUTATED    17   0
  DEL PEAK 15(11Q23.2) WILD-TYPE 142   1
  DEL PEAK 15(11Q23.2) MUTATED DEL PEAK 15(11Q23.2) WILD-TYPE 
                            17                            143 
  DEL PEAK 15(11Q23.2) MUTATED DEL PEAK 15(11Q23.2) WILD-TYPE 
                             0                              1 
$`DEL PEAK 15(11Q23.2) MUTATED`
TCGA-CH-5761 TCGA-CH-5769 TCGA-CH-5790 TCGA-CH-5792 TCGA-EJ-5504 TCGA-EJ-5509 
        0.92         2.04        32.02         2.99         7.53        36.03 
TCGA-EJ-5518 TCGA-EJ-5527 TCGA-EJ-7330 TCGA-G9-6363 TCGA-G9-6377 TCGA-G9-6494 
       39.29        13.05         6.28        32.65        17.03        47.41 
TCGA-G9-7522 TCGA-HC-7077 TCGA-HC-7212 TCGA-HC-7213 TCGA-HC-7736 
       14.83        65.98         1.02         1.97         0.99 

$`DEL PEAK 15(11Q23.2) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 
        1.97        24.03         1.02        12.99        35.01        30.97 
TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 
        1.02         2.04        44.02        12.00         1.02        23.01 
TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5788 
        1.02        15.06        24.03        12.99        15.95        26.96 
TCGA-CH-5789 TCGA-CH-5791 TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 
        9.96        33.01        28.96        12.43        19.89        19.53 
TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 
       13.02        17.62        17.49        23.97         8.02        17.42 
TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5510 TCGA-EJ-5511 
       14.70        11.70         5.98        29.82        24.23        25.91 
TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5519 
       25.71        23.80        34.88        25.74        27.91        37.91 
TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5530 
       27.68        46.13        27.42        25.97        18.64        41.82 
TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 
       23.80        29.92        17.06        26.99        48.99        61.15 
TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 
        9.70         9.50         9.37         7.66         5.75         5.59 
TCGA-EJ-7331 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 
        0.30         5.56         2.10         4.31         5.49         8.48 
TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 
        2.60         1.71         2.30         7.13        17.29         1.41 
TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B 
        9.34         6.15        63.98        26.99        66.12         5.33 
TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 
        1.05        30.35        65.92        63.29        54.87        54.21 
TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 
       43.99        18.21        37.61        39.95        27.85        32.88 
TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 
       33.14        27.02        27.65        26.43         3.32        28.77 
TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6378 TCGA-G9-6384 
       27.98        26.50        27.81        16.60        21.83        12.82 
TCGA-G9-6385 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 
       11.70        33.34        36.46        22.16        15.02        15.98 
TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7078 TCGA-HC-7079 
       10.65        16.83         1.02         2.01         5.33         2.93 
TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7737 
        2.01         1.02         0.99         1.68         2.37         2.07 
TCGA-HC-7740 TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7749 
        1.74         1.48         1.68         1.87         2.04         2.01 
TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-7821 TCGA-HC-8265 TCGA-HC-A4ZV 
        1.12         3.22         1.48         1.84         2.04         0.76 
TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       65.92        64.08        62.43        66.02         3.22 

  DEL PEAK 15(11Q23.2) MUTATED DEL PEAK 15(11Q23.2) WILD-TYPE 
                          0.92                           0.30 
  DEL PEAK 15(11Q23.2) MUTATED DEL PEAK 15(11Q23.2) WILD-TYPE 
                         65.98                          66.12 
  DEL PEAK 15(11Q23.2) MUTATED DEL PEAK 15(11Q23.2) WILD-TYPE 
                         13.05                          15.95 
[1] "0.9 - 66.0 (13.1)" "0.3 - 66.1 (15.9)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-HC-7213                     TCGA-HC-7230 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-HC-7213                     TCGA-HC-7230 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-HC-7213                     TCGA-HC-7230 
  "DEL PEAK 15(11Q23.2) MUTATED" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"DEL PEAK 15(11Q23.2) WILD-TYPE"   "DEL PEAK 15(11Q23.2) MUTATED" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 15(11Q23.2) WILD-TYPE" "DEL PEAK 15(11Q23.2) WILD-TYPE" 
[1] "hr=" "1"  
D36V2, continuous
                                vv
clus                             T2 T3 T4
  DEL PEAK 15(11Q23.2) MUTATED    6  8  3
  DEL PEAK 15(11Q23.2) WILD-TYPE 63 77  2
D36V3, multiclass
    clus
vv   DEL PEAK 15(11Q23.2) MUTATED DEL PEAK 15(11Q23.2) WILD-TYPE
  T2                            6                             63
  T3                            8                             77
  T4                            3                              2
D36V4, binary
                                cls
clus                               0   1
  DEL PEAK 15(11Q23.2) MUTATED    15   1
  DEL PEAK 15(11Q23.2) WILD-TYPE 111  14
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 15(11Q23.2) MUTATED     15    1
  DEL PEAK 15(11Q23.2) WILD-TYPE  111   14
   clus
vv  DEL PEAK 15(11Q23.2) MUTATED DEL PEAK 15(11Q23.2) WILD-TYPE
  0                           15                            111
  1                            1                             14
                                vv
clus                              R0  R1  RX
  DEL PEAK 15(11Q23.2) MUTATED    11   4   0
  DEL PEAK 15(11Q23.2) WILD-TYPE 108  27   3
D36V5, multiclass
    clus
vv   DEL PEAK 15(11Q23.2) MUTATED DEL PEAK 15(11Q23.2) WILD-TYPE
  R0                           11                            108
  R1                            4                             27
  RX                            0                              3
D36V6, continuous

Clustering(37) Variable = DEL PEAK 16(12P13.2) MUTATION ANALYSIS
D37V1, survival
                                sevent
clus2                              0   1
  DEL PEAK 16(12P13.2) MUTATED    34   0
  DEL PEAK 16(12P13.2) WILD-TYPE 125   1
  DEL PEAK 16(12P13.2) MUTATED DEL PEAK 16(12P13.2) WILD-TYPE 
                            34                            126 
  DEL PEAK 16(12P13.2) MUTATED DEL PEAK 16(12P13.2) WILD-TYPE 
                             0                              1 
$`DEL PEAK 16(12P13.2) MUTATED`
TCGA-CH-5744 TCGA-CH-5748 TCGA-CH-5751 TCGA-CH-5752 TCGA-CH-5761 TCGA-CH-5766 
        1.97         1.02        35.01        30.97         0.92         1.02 
TCGA-CH-5768 TCGA-CH-5792 TCGA-EJ-5501 TCGA-EJ-5507 TCGA-EJ-5510 TCGA-EJ-5514 
       24.03         2.99        23.97         5.98        24.23        23.80 
TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5522 TCGA-EJ-5526 TCGA-EJ-7314 TCGA-EJ-7315 
       39.29        37.91        46.13        18.64         9.70         9.50 
TCGA-EJ-7781 TCGA-EJ-7788 TCGA-EJ-7789 TCGA-EJ-8470 TCGA-EJ-8472 TCGA-G9-6333 
        5.56         1.71         2.30        26.99        66.12        63.29 
TCGA-G9-6362 TCGA-G9-6364 TCGA-G9-6384 TCGA-G9-6499 TCGA-G9-7521 TCGA-G9-7525 
       27.02        27.65        12.82        36.46        15.98        16.83 
TCGA-HC-7209 TCGA-HC-7230 TCGA-HC-7736 TCGA-HI-7168 
        1.02         1.68         0.99        65.92 

$`DEL PEAK 16(12P13.2) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5746 TCGA-CH-5750 TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5762 TCGA-CH-5763 
       24.03        12.99         1.02         2.04        44.02        12.00 
TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5767 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 
        1.02        23.01        15.06         2.04        12.99        15.95 
TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5794 TCGA-EJ-5494 
       26.96         9.96        32.02        33.01        28.96        12.43 
TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5502 
       19.89        19.53        13.02        17.62        17.49         8.02 
TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5508 TCGA-EJ-5509 
       17.42         7.53        14.70        11.70        29.82        36.03 
TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5521 
       25.91        25.71        34.88        25.74        27.91        27.68 
TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 
       27.42        25.97        13.05        41.82        23.80        29.92 
TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7317 TCGA-EJ-7321 
       17.06        26.99        48.99        61.15         9.37         7.66 
TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7782 TCGA-EJ-7783 
        5.75         5.59         6.28         0.30         2.10         4.31 
TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 
        5.49         8.48         2.60         7.13        17.29         1.41 
TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6329 
        9.34         6.15        63.98         5.33         1.05        30.35 
TCGA-G9-6332 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 
       65.92        54.87        54.21        43.99        18.21        37.61 
TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6363 TCGA-G9-6365 
       39.95        27.85        32.88        33.14        32.65        26.43 
TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 
        3.32        28.77        27.98        26.50        27.81        16.60 
TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 
       17.03        21.83        11.70        47.41        33.34        22.16 
TCGA-G9-7519 TCGA-G9-7522 TCGA-G9-7523 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 
       15.02        14.83        10.65         1.02         2.01        65.98 
TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7213 
        5.33         2.93         2.01         0.99         1.02         1.97 
TCGA-HC-7231 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 
        2.37         2.07         1.74         1.48         1.68         1.87 
TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-7821 
        2.04         2.01         1.12         3.22         1.48         1.84 
TCGA-HC-8265 TCGA-HC-A4ZV TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
        2.04         0.76        64.08        62.43        66.02         3.22 

  DEL PEAK 16(12P13.2) MUTATED DEL PEAK 16(12P13.2) WILD-TYPE 
                          0.92                           0.30 
  DEL PEAK 16(12P13.2) MUTATED DEL PEAK 16(12P13.2) WILD-TYPE 
                         66.12                          66.02 
  DEL PEAK 16(12P13.2) MUTATED DEL PEAK 16(12P13.2) WILD-TYPE 
                        17.735                         14.765 
[1] "0.9 - 66.1 (17.7)" "0.3 - 66.0 (14.8)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 16(12P13.2) MUTATED"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
  "DEL PEAK 16(12P13.2) MUTATED"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
  "DEL PEAK 16(12P13.2) MUTATED"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
  "DEL PEAK 16(12P13.2) MUTATED"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 16(12P13.2) MUTATED"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
  "DEL PEAK 16(12P13.2) MUTATED"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
  "DEL PEAK 16(12P13.2) MUTATED"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
  "DEL PEAK 16(12P13.2) MUTATED"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 16(12P13.2) MUTATED"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
  "DEL PEAK 16(12P13.2) MUTATED"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
  "DEL PEAK 16(12P13.2) MUTATED"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
  "DEL PEAK 16(12P13.2) MUTATED"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
  "DEL PEAK 16(12P13.2) MUTATED" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"DEL PEAK 16(12P13.2) WILD-TYPE"   "DEL PEAK 16(12P13.2) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 16(12P13.2) WILD-TYPE" "DEL PEAK 16(12P13.2) WILD-TYPE" 
[1] "hr="     "1.6e+09"
D37V2, continuous
                                vv
clus                             T2 T3 T4
  DEL PEAK 16(12P13.2) MUTATED   11 21  2
  DEL PEAK 16(12P13.2) WILD-TYPE 58 64  3
D37V3, multiclass
    clus
vv   DEL PEAK 16(12P13.2) MUTATED DEL PEAK 16(12P13.2) WILD-TYPE
  T2                           11                             58
  T3                           21                             64
  T4                            2                              3
D37V4, binary
                                cls
clus                              0  1
  DEL PEAK 16(12P13.2) MUTATED   28  6
  DEL PEAK 16(12P13.2) WILD-TYPE 98  9
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 16(12P13.2) MUTATED     28    6
  DEL PEAK 16(12P13.2) WILD-TYPE   98    9
   clus
vv  DEL PEAK 16(12P13.2) MUTATED DEL PEAK 16(12P13.2) WILD-TYPE
  0                           28                             98
  1                            6                              9
                                vv
clus                             R0 R1 RX
  DEL PEAK 16(12P13.2) MUTATED   27  5  0
  DEL PEAK 16(12P13.2) WILD-TYPE 92 26  3
D37V5, multiclass
    clus
vv   DEL PEAK 16(12P13.2) MUTATED DEL PEAK 16(12P13.2) WILD-TYPE
  R0                           27                             92
  R1                            5                             26
  RX                            0                              3
D37V6, continuous

Clustering(38) Variable = DEL PEAK 17(13Q14.13) MUTATION ANALYSIS
D38V1, survival
                                 sevent
clus2                              0  1
  DEL PEAK 17(13Q14.13) MUTATED   73  1
  DEL PEAK 17(13Q14.13) WILD-TYPE 86  0
  DEL PEAK 17(13Q14.13) MUTATED DEL PEAK 17(13Q14.13) WILD-TYPE 
                             74                              86 
  DEL PEAK 17(13Q14.13) MUTATED DEL PEAK 17(13Q14.13) WILD-TYPE 
                              1                               0 
$`DEL PEAK 17(13Q14.13) MUTATED`
TCGA-CH-5737 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5748 TCGA-CH-5752 
        2.99        22.06         1.02        12.99         1.02        30.97 
TCGA-CH-5754 TCGA-CH-5762 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5768 TCGA-CH-5771 
        2.04        44.02         1.02        23.01        24.03        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5495 TCGA-EJ-5496 
       15.95        26.96         2.99        28.96        19.89        19.53 
TCGA-EJ-5499 TCGA-EJ-5504 TCGA-EJ-5507 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 
       17.49         7.53         5.98        36.03        24.23        25.91 
TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5516 TCGA-EJ-5518 TCGA-EJ-5521 TCGA-EJ-5525 
       25.71        23.80        25.74        39.29        27.68        25.97 
TCGA-EJ-5527 TCGA-EJ-5531 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7315 TCGA-EJ-7317 
       13.05        23.80        26.99        48.99         9.50         9.37 
TCGA-EJ-7321 TCGA-EJ-7330 TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 
        7.66         6.28         5.56         2.10         4.31         5.49 
TCGA-EJ-7786 TCGA-EJ-7789 TCGA-EJ-7794 TCGA-EJ-8469 TCGA-EJ-8472 TCGA-G9-6329 
        2.60         2.30         9.34        63.98        66.12        30.35 
TCGA-G9-6348 TCGA-G9-6361 TCGA-G9-6365 TCGA-G9-6369 TCGA-G9-6378 TCGA-G9-6494 
       37.61        33.14        26.43        27.98        21.83        47.41 
TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-H9-7775 TCGA-HC-7077 TCGA-HC-7078 
       22.16        15.02        15.98         1.02        65.98         5.33 
TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7212 TCGA-HC-7213 TCGA-HC-7231 TCGA-HC-7737 
        2.01         1.02         1.02         1.97         2.37         2.07 
TCGA-HC-7744 TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7821 TCGA-HC-A4ZV TCGA-HI-7168 
        1.68         2.01         1.12         1.84         0.76        65.92 
TCGA-HI-7171 TCGA-J4-8198 
       66.02         3.22 

$`DEL PEAK 17(13Q14.13) WILD-TYPE`
TCGA-CH-5738 TCGA-CH-5743 TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5750 TCGA-CH-5751 
        6.97        13.94         1.97        24.03        12.99        35.01 
TCGA-CH-5753 TCGA-CH-5761 TCGA-CH-5763 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5769 
        1.02         0.92        12.00         1.02        15.06         2.04 
TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-EJ-5494 TCGA-EJ-5497 TCGA-EJ-5498 
        9.96        32.02        33.01        12.43        13.02        17.62 
TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5508 
       23.97         8.02        17.42        14.70        11.70        29.82 
TCGA-EJ-5515 TCGA-EJ-5517 TCGA-EJ-5519 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5526 
       34.88        27.91        37.91        46.13        27.42        18.64 
TCGA-EJ-5530 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7327 
       41.82        29.92        17.06        61.15         9.70         5.75 
TCGA-EJ-7328 TCGA-EJ-7331 TCGA-EJ-7785 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 
        5.59         0.30         8.48         1.71         7.13        17.29 
TCGA-EJ-7793 TCGA-EJ-7797 TCGA-EJ-8470 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6332 
        1.41         6.15        26.99         5.33         1.05        65.92 
TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6351 
       63.29        54.87        54.21        43.99        18.21        39.95 
TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6366 
       27.85        32.88        27.02        32.65        27.65         3.32 
TCGA-G9-6367 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6384 
       28.77        26.50        27.81        16.60        17.03        12.82 
TCGA-G9-6385 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 
       11.70        33.34        36.46        14.83        10.65        16.83 
TCGA-HC-7075 TCGA-HC-7079 TCGA-HC-7211 TCGA-HC-7230 TCGA-HC-7736 TCGA-HC-7740 
        2.01         2.93         0.99         1.68         0.99         1.74 
TCGA-HC-7742 TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-8265 
        1.48         1.87         2.04         3.22         1.48         2.04 
TCGA-HI-7169 TCGA-HI-7170 
       64.08        62.43 

  DEL PEAK 17(13Q14.13) MUTATED DEL PEAK 17(13Q14.13) WILD-TYPE 
                           0.76                            0.30 
  DEL PEAK 17(13Q14.13) MUTATED DEL PEAK 17(13Q14.13) WILD-TYPE 
                          66.12                           65.92 
  DEL PEAK 17(13Q14.13) MUTATED DEL PEAK 17(13Q14.13) WILD-TYPE 
                         15.485                          14.945 
[1] "0.8 - 66.1 (15.5)" "0.3 - 65.9 (14.9)"
                     TCGA-CH-5737                      TCGA-CH-5738 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5741                      TCGA-CH-5743 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5751                      TCGA-CH-5752 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5761                      TCGA-CH-5762 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5765                      TCGA-CH-5766 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5769                      TCGA-CH-5771 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5772                      TCGA-CH-5788 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5791                      TCGA-CH-5792 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7797                      TCGA-EJ-8469 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-8470                      TCGA-EJ-8472 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-A46B                      TCGA-FC-7708 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6329                      TCGA-G9-6332 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6364                      TCGA-G9-6365 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6377                      TCGA-G9-6378 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-G9-7519                      TCGA-G9-7521 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-G9-7522                      TCGA-G9-7523 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-HC-7075                      TCGA-HC-7077 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-HC-7078                      TCGA-HC-7079 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HC-7080                      TCGA-HC-7209 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-HC-7211                      TCGA-HC-7212 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-HC-7213                      TCGA-HC-7230 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HC-7231                      TCGA-HC-7736 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HC-7737                      TCGA-HC-7740 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HC-7742                      TCGA-HC-7744 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-HC-7747                      TCGA-HC-7748 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HC-7749                      TCGA-HC-7750 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-HC-7752                      TCGA-HC-7818 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HC-7821                      TCGA-HC-8265 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HC-A4ZV                      TCGA-HI-7168 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5737                      TCGA-CH-5738 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5741                      TCGA-CH-5743 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5751                      TCGA-CH-5752 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5761                      TCGA-CH-5762 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5765                      TCGA-CH-5766 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5769                      TCGA-CH-5771 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5772                      TCGA-CH-5788 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5791                      TCGA-CH-5792 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7797                      TCGA-EJ-8469 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-8470                      TCGA-EJ-8472 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-A46B                      TCGA-FC-7708 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6329                      TCGA-G9-6332 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6364                      TCGA-G9-6365 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6377                      TCGA-G9-6378 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-G9-7519                      TCGA-G9-7521 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-G9-7522                      TCGA-G9-7523 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-HC-7075                      TCGA-HC-7077 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-HC-7078                      TCGA-HC-7079 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HC-7080                      TCGA-HC-7209 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-HC-7211                      TCGA-HC-7212 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-HC-7213                      TCGA-HC-7230 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HC-7231                      TCGA-HC-7736 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HC-7737                      TCGA-HC-7740 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HC-7742                      TCGA-HC-7744 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-HC-7747                      TCGA-HC-7748 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HC-7749                      TCGA-HC-7750 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-HC-7752                      TCGA-HC-7818 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HC-7821                      TCGA-HC-8265 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HC-A4ZV                      TCGA-HI-7168 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5737                      TCGA-CH-5738 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5741                      TCGA-CH-5743 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5751                      TCGA-CH-5752 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5761                      TCGA-CH-5762 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5765                      TCGA-CH-5766 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5769                      TCGA-CH-5771 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5772                      TCGA-CH-5788 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-CH-5791                      TCGA-CH-5792 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-7797                      TCGA-EJ-8469 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-8470                      TCGA-EJ-8472 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-EJ-A46B                      TCGA-FC-7708 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6329                      TCGA-G9-6332 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6364                      TCGA-G9-6365 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6377                      TCGA-G9-6378 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-G9-7519                      TCGA-G9-7521 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-G9-7522                      TCGA-G9-7523 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-HC-7075                      TCGA-HC-7077 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-HC-7078                      TCGA-HC-7079 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HC-7080                      TCGA-HC-7209 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-HC-7211                      TCGA-HC-7212 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-HC-7213                      TCGA-HC-7230 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HC-7231                      TCGA-HC-7736 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HC-7737                      TCGA-HC-7740 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HC-7742                      TCGA-HC-7744 
"DEL PEAK 17(13Q14.13) WILD-TYPE"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-HC-7747                      TCGA-HC-7748 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HC-7749                      TCGA-HC-7750 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-HC-7752                      TCGA-HC-7818 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HC-7821                      TCGA-HC-8265 
  "DEL PEAK 17(13Q14.13) MUTATED" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HC-A4ZV                      TCGA-HI-7168 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"DEL PEAK 17(13Q14.13) WILD-TYPE" "DEL PEAK 17(13Q14.13) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "DEL PEAK 17(13Q14.13) MUTATED"   "DEL PEAK 17(13Q14.13) MUTATED" 
[1] "hr=" "1"  
D38V2, continuous
                                 vv
clus                              T2 T3 T4
  DEL PEAK 17(13Q14.13) MUTATED   29 42  3
  DEL PEAK 17(13Q14.13) WILD-TYPE 40 43  2
D38V3, multiclass
    clus
vv   DEL PEAK 17(13Q14.13) MUTATED DEL PEAK 17(13Q14.13) WILD-TYPE
  T2                            29                              40
  T3                            42                              43
  T4                             3                               2
D38V4, binary
                                 cls
clus                               0  1
  DEL PEAK 17(13Q14.13) MUTATED   57  9
  DEL PEAK 17(13Q14.13) WILD-TYPE 69  6
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 17(13Q14.13) MUTATED     57    9
  DEL PEAK 17(13Q14.13) WILD-TYPE   69    6
   clus
vv  DEL PEAK 17(13Q14.13) MUTATED DEL PEAK 17(13Q14.13) WILD-TYPE
  0                            57                              69
  1                             9                               6
                                 vv
clus                              R0 R1 RX
  DEL PEAK 17(13Q14.13) MUTATED   53 16  1
  DEL PEAK 17(13Q14.13) WILD-TYPE 66 15  2
D38V5, multiclass
    clus
vv   DEL PEAK 17(13Q14.13) MUTATED DEL PEAK 17(13Q14.13) WILD-TYPE
  R0                            53                              66
  R1                            16                              15
  RX                             1                               2
D38V6, continuous

Clustering(39) Variable = DEL PEAK 18(16Q22.3) MUTATION ANALYSIS
D39V1, survival
                                sevent
clus2                              0   1
  DEL PEAK 18(16Q22.3) MUTATED    52   1
  DEL PEAK 18(16Q22.3) WILD-TYPE 107   0
  DEL PEAK 18(16Q22.3) MUTATED DEL PEAK 18(16Q22.3) WILD-TYPE 
                            53                            107 
  DEL PEAK 18(16Q22.3) MUTATED DEL PEAK 18(16Q22.3) WILD-TYPE 
                             1                              0 
$`DEL PEAK 18(16Q22.3) MUTATED`
TCGA-CH-5739 TCGA-CH-5744 TCGA-CH-5751 TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5764 
       22.06         1.97        35.01         1.02         2.04         1.02 
TCGA-CH-5788 TCGA-CH-5791 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5498 TCGA-EJ-5508 
       26.96        33.01        19.89        19.53        17.62        29.82 
TCGA-EJ-5511 TCGA-EJ-5514 TCGA-EJ-5516 TCGA-EJ-5521 TCGA-EJ-5525 TCGA-EJ-5527 
       25.91        23.80        25.74        27.68        25.97        13.05 
TCGA-EJ-7123 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7781 TCGA-EJ-7783 
       48.99         7.66         5.75         5.59         5.56         4.31 
TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7789 TCGA-EJ-7794 TCGA-EJ-8469 TCGA-EJ-8470 
        5.49         8.48         2.30         9.34        63.98        26.99 
TCGA-EJ-8472 TCGA-G9-6329 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6361 TCGA-G9-6362 
       66.12        30.35        43.99        18.21        33.14        27.02 
TCGA-G9-6373 TCGA-G9-6384 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7521 TCGA-G9-7523 
       16.60        12.82        33.34        36.46        15.98        10.65 
TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7213 TCGA-HC-7736 TCGA-HC-7742 
        1.02         0.99         1.02         1.97         0.99         1.48 
TCGA-HC-7749 TCGA-HC-7821 TCGA-HC-A4ZV TCGA-HI-7168 TCGA-HI-7171 
        2.01         1.84         0.76        65.92        66.02 

$`DEL PEAK 18(16Q22.3) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5746 
        2.99         6.97         1.02        12.99        13.94        24.03 
TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 
        1.02        12.99        30.97         0.92        44.02        12.00 
TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       23.01         1.02        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 
       15.95         9.96        32.02         2.99        28.96        12.43 
TCGA-EJ-5497 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 
       13.02        17.49        23.97         8.02        17.42         7.53 
TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5512 
       14.70        11.70         5.98        36.03        24.23        25.71 
TCGA-EJ-5515 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5522 TCGA-EJ-5524 
       34.88        27.91        39.29        37.91        46.13        27.42 
TCGA-EJ-5526 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 
       18.64        41.82        23.80        29.92        17.06        26.99 
TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7330 TCGA-EJ-7331 
       61.15         9.70         9.50         9.37         6.28         0.30 
TCGA-EJ-7782 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 
        2.10         2.60         1.71         7.13        17.29         1.41 
TCGA-EJ-7797 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 
        6.15         5.33         1.05        65.92        63.29        54.87 
TCGA-G9-6338 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6363 
       54.21        37.61        39.95        27.85        32.88        32.65 
TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 
       27.65        26.43         3.32        28.77        27.98        26.50 
TCGA-G9-6371 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-7510 
       27.81        17.03        21.83        11.70        47.41        22.16 
TCGA-G9-7519 TCGA-G9-7522 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 
       15.02        14.83        16.83         1.02         2.01        65.98 
TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7737 
        5.33         2.93         2.01         1.68         2.37         2.07 
TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 TCGA-HC-7750 TCGA-HC-7752 
        1.74         1.68         1.87         2.04         1.12         3.22 
TCGA-HC-7818 TCGA-HC-8265 TCGA-HI-7169 TCGA-HI-7170 TCGA-J4-8198 
        1.48         2.04        64.08        62.43         3.22 

  DEL PEAK 18(16Q22.3) MUTATED DEL PEAK 18(16Q22.3) WILD-TYPE 
                          0.76                           0.30 
  DEL PEAK 18(16Q22.3) MUTATED DEL PEAK 18(16Q22.3) WILD-TYPE 
                         66.12                          65.98 
  DEL PEAK 18(16Q22.3) MUTATED DEL PEAK 18(16Q22.3) WILD-TYPE 
                         16.60                          14.83 
[1] "0.8 - 66.1 (16.6)" "0.3 - 66.0 (14.8)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 18(16Q22.3) MUTATED"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "DEL PEAK 18(16Q22.3) MUTATED"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
  "DEL PEAK 18(16Q22.3) MUTATED"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 18(16Q22.3) MUTATED"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
  "DEL PEAK 18(16Q22.3) MUTATED"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-HC-7211                     TCGA-HC-7212 
  "DEL PEAK 18(16Q22.3) MUTATED"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-HC-7213                     TCGA-HC-7230 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "DEL PEAK 18(16Q22.3) MUTATED"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 18(16Q22.3) MUTATED"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "DEL PEAK 18(16Q22.3) MUTATED"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
  "DEL PEAK 18(16Q22.3) MUTATED"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 18(16Q22.3) MUTATED"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
  "DEL PEAK 18(16Q22.3) MUTATED"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-HC-7211                     TCGA-HC-7212 
  "DEL PEAK 18(16Q22.3) MUTATED"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-HC-7213                     TCGA-HC-7230 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "DEL PEAK 18(16Q22.3) MUTATED"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 18(16Q22.3) MUTATED"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "DEL PEAK 18(16Q22.3) MUTATED"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
  "DEL PEAK 18(16Q22.3) MUTATED"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 18(16Q22.3) MUTATED"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
  "DEL PEAK 18(16Q22.3) MUTATED"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-HC-7211                     TCGA-HC-7212 
  "DEL PEAK 18(16Q22.3) MUTATED"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-HC-7213                     TCGA-HC-7230 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"DEL PEAK 18(16Q22.3) WILD-TYPE"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "DEL PEAK 18(16Q22.3) MUTATED"   "DEL PEAK 18(16Q22.3) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 18(16Q22.3) WILD-TYPE" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 18(16Q22.3) MUTATED" "DEL PEAK 18(16Q22.3) WILD-TYPE" 
[1] "hr=" "1"  
D39V2, continuous
                                vv
clus                             T2 T3 T4
  DEL PEAK 18(16Q22.3) MUTATED   17 35  1
  DEL PEAK 18(16Q22.3) WILD-TYPE 52 50  4
D39V3, multiclass
    clus
vv   DEL PEAK 18(16Q22.3) MUTATED DEL PEAK 18(16Q22.3) WILD-TYPE
  T2                           17                             52
  T3                           35                             50
  T4                            1                              4
D39V4, binary
                                cls
clus                              0  1
  DEL PEAK 18(16Q22.3) MUTATED   42  7
  DEL PEAK 18(16Q22.3) WILD-TYPE 84  8
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 18(16Q22.3) MUTATED     42    7
  DEL PEAK 18(16Q22.3) WILD-TYPE   84    8
   clus
vv  DEL PEAK 18(16Q22.3) MUTATED DEL PEAK 18(16Q22.3) WILD-TYPE
  0                           42                             84
  1                            7                              8
                                vv
clus                             R0 R1 RX
  DEL PEAK 18(16Q22.3) MUTATED   39  9  1
  DEL PEAK 18(16Q22.3) WILD-TYPE 80 22  2
D39V5, multiclass
    clus
vv   DEL PEAK 18(16Q22.3) MUTATED DEL PEAK 18(16Q22.3) WILD-TYPE
  R0                           39                             80
  R1                            9                             22
  RX                            1                              2
D39V6, continuous

Clustering(40) Variable = DEL PEAK 19(16Q24.1) MUTATION ANALYSIS
D40V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 19(16Q24.1) MUTATED   67  1
  DEL PEAK 19(16Q24.1) WILD-TYPE 92  0
  DEL PEAK 19(16Q24.1) MUTATED DEL PEAK 19(16Q24.1) WILD-TYPE 
                            68                             92 
  DEL PEAK 19(16Q24.1) MUTATED DEL PEAK 19(16Q24.1) WILD-TYPE 
                             1                              0 
$`DEL PEAK 19(16Q24.1) MUTATED`
TCGA-CH-5739 TCGA-CH-5744 TCGA-CH-5751 TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 
       22.06         1.97        35.01         1.02         2.04         0.92 
TCGA-CH-5762 TCGA-CH-5764 TCGA-CH-5766 TCGA-CH-5771 TCGA-CH-5788 TCGA-CH-5790 
       44.02         1.02         1.02        12.99        26.96        32.02 
TCGA-CH-5791 TCGA-CH-5792 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5498 TCGA-EJ-5499 
       33.01         2.99        19.89        19.53        17.62        17.49 
TCGA-EJ-5501 TCGA-EJ-5508 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5514 TCGA-EJ-5516 
       23.97        29.82        24.23        25.91        23.80        25.74 
TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-7123 TCGA-EJ-7314 
       27.42        25.97        18.64        13.05        48.99         9.70 
TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7781 TCGA-EJ-7783 TCGA-EJ-7784 
        7.66         5.75         5.59         5.56         4.31         5.49 
TCGA-EJ-7785 TCGA-EJ-7789 TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-8472 TCGA-G9-6329 
        8.48         2.30        63.98        26.99        66.12        30.35 
TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6373 TCGA-G9-6377 
       43.99        18.21        33.14        27.02        16.60        17.03 
TCGA-G9-6384 TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7521 TCGA-G9-7523 TCGA-HC-7078 
       12.82        33.34        36.46        15.98        10.65         5.33 
TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7213 TCGA-HC-7736 TCGA-HC-7742 
        1.02         0.99         1.02         1.97         0.99         1.48 
TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7752 TCGA-HC-7821 TCGA-HC-8265 TCGA-HC-A4ZV 
        2.04         2.01         3.22         1.84         2.04         0.76 
TCGA-HI-7168 TCGA-HI-7171 
       65.92        66.02 

$`DEL PEAK 19(16Q24.1) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5746 
        2.99         6.97         1.02        12.99        13.94        24.03 
TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5763 TCGA-CH-5765 TCGA-CH-5767 
        1.02        12.99        30.97        12.00        23.01        15.06 
TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5772 TCGA-CH-5789 TCGA-CH-5794 TCGA-EJ-5494 
       24.03         2.04        15.95         9.96        28.96        12.43 
TCGA-EJ-5497 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 
       13.02         8.02        17.42         7.53        14.70        11.70 
TCGA-EJ-5507 TCGA-EJ-5509 TCGA-EJ-5512 TCGA-EJ-5515 TCGA-EJ-5517 TCGA-EJ-5518 
        5.98        36.03        25.71        34.88        27.91        39.29 
TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 
       37.91        27.68        46.13        41.82        23.80        29.92 
TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7125 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7330 
       17.06        26.99        61.15         9.50         9.37         6.28 
TCGA-EJ-7331 TCGA-EJ-7782 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7791 TCGA-EJ-7792 
        0.30         2.10         2.60         1.71         7.13        17.29 
TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6332 
        1.41         9.34         6.15         5.33         1.05        65.92 
TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6353 
       63.29        54.87        54.21        37.61        39.95        27.85 
TCGA-G9-6356 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 
       32.88        32.65        27.65        26.43         3.32        28.77 
TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6378 TCGA-G9-6385 TCGA-G9-6494 
       27.98        26.50        27.81        21.83        11.70        47.41 
TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7522 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 
       22.16        15.02        14.83        16.83         1.02         2.01 
TCGA-HC-7077 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7737 
       65.98         2.93         2.01         1.68         2.37         2.07 
TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7750 TCGA-HC-7818 TCGA-HI-7169 
        1.74         1.68         1.87         1.12         1.48        64.08 
TCGA-HI-7170 TCGA-J4-8198 
       62.43         3.22 

  DEL PEAK 19(16Q24.1) MUTATED DEL PEAK 19(16Q24.1) WILD-TYPE 
                          0.76                           0.30 
  DEL PEAK 19(16Q24.1) MUTATED DEL PEAK 19(16Q24.1) WILD-TYPE 
                         66.12                          65.98 
  DEL PEAK 19(16Q24.1) MUTATED DEL PEAK 19(16Q24.1) WILD-TYPE 
                        16.290                         14.925 
[1] "0.8 - 66.1 (16.3)" "0.3 - 66.0 (14.9)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-HC-7211                     TCGA-HC-7212 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-HC-7213                     TCGA-HC-7230 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-HC-7749                     TCGA-HC-7750 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-HC-7211                     TCGA-HC-7212 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-HC-7213                     TCGA-HC-7230 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-HC-7749                     TCGA-HC-7750 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-HC-7211                     TCGA-HC-7212 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-HC-7213                     TCGA-HC-7230 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 19(16Q24.1) WILD-TYPE"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-HC-7749                     TCGA-HC-7750 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "DEL PEAK 19(16Q24.1) MUTATED"   "DEL PEAK 19(16Q24.1) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 19(16Q24.1) WILD-TYPE" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 19(16Q24.1) MUTATED" "DEL PEAK 19(16Q24.1) WILD-TYPE" 
[1] "hr=" "1"  
D40V2, continuous
                                vv
clus                             T2 T3 T4
  DEL PEAK 19(16Q24.1) MUTATED   22 45  1
  DEL PEAK 19(16Q24.1) WILD-TYPE 47 40  4
D40V3, multiclass
    clus
vv   DEL PEAK 19(16Q24.1) MUTATED DEL PEAK 19(16Q24.1) WILD-TYPE
  T2                           22                             47
  T3                           45                             40
  T4                            1                              4
D40V4, binary
                                cls
clus                              0  1
  DEL PEAK 19(16Q24.1) MUTATED   55  9
  DEL PEAK 19(16Q24.1) WILD-TYPE 71  6
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 19(16Q24.1) MUTATED     55    9
  DEL PEAK 19(16Q24.1) WILD-TYPE   71    6
   clus
vv  DEL PEAK 19(16Q24.1) MUTATED DEL PEAK 19(16Q24.1) WILD-TYPE
  0                           55                             71
  1                            9                              6
                                vv
clus                             R0 R1 RX
  DEL PEAK 19(16Q24.1) MUTATED   51 12  1
  DEL PEAK 19(16Q24.1) WILD-TYPE 68 19  2
D40V5, multiclass
    clus
vv   DEL PEAK 19(16Q24.1) MUTATED DEL PEAK 19(16Q24.1) WILD-TYPE
  R0                           51                             68
  R1                           12                             19
  RX                            1                              2
D40V6, continuous

Clustering(41) Variable = DEL PEAK 20(17P13.1) MUTATION ANALYSIS
D41V1, survival
                                sevent
clus2                              0   1
  DEL PEAK 20(17P13.1) MUTATED    41   1
  DEL PEAK 20(17P13.1) WILD-TYPE 118   0
  DEL PEAK 20(17P13.1) MUTATED DEL PEAK 20(17P13.1) WILD-TYPE 
                            42                            118 
  DEL PEAK 20(17P13.1) MUTATED DEL PEAK 20(17P13.1) WILD-TYPE 
                             1                              0 
$`DEL PEAK 20(17P13.1) MUTATED`
TCGA-CH-5751 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5764 TCGA-CH-5766 
       35.01         2.04         0.92        44.02         1.02         1.02 
TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5794 TCGA-EJ-5507 TCGA-EJ-5514 TCGA-EJ-5519 
       32.02        33.01        28.96         5.98        23.80        37.91 
TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 
       27.68        46.13        27.42        25.97        18.64        13.05 
TCGA-EJ-7315 TCGA-EJ-7321 TCGA-EJ-7328 TCGA-EJ-7781 TCGA-EJ-7797 TCGA-G9-6342 
        9.50         7.66         5.59         5.56         6.15        43.99 
TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6384 TCGA-G9-6494 TCGA-G9-6499 TCGA-G9-7510 
       16.60        17.03        12.82        47.41        36.46        22.16 
TCGA-G9-7521 TCGA-HC-7078 TCGA-HC-7212 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 
       15.98         5.33         1.02         1.97         1.68         2.37 
TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-A4ZV TCGA-HI-7168 TCGA-HI-7171 
        1.48         1.68         1.87         0.76        65.92        66.02 

$`DEL PEAK 20(17P13.1) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5741 TCGA-CH-5743 
        2.99         6.97        22.06         1.02        12.99        13.94 
TCGA-CH-5744 TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5753 
        1.97        24.03         1.02        12.99        30.97         1.02 
TCGA-CH-5763 TCGA-CH-5765 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 
       12.00        23.01        15.06        24.03         2.04        12.99 
TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5792 TCGA-EJ-5494 TCGA-EJ-5495 
       15.95        26.96         9.96         2.99        12.43        19.89 
TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 
       19.53        13.02        17.62        17.49        23.97         8.02 
TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5508 TCGA-EJ-5509 
       17.42         7.53        14.70        11.70        29.82        36.03 
TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5515 TCGA-EJ-5516 TCGA-EJ-5517 
       24.23        25.91        25.71        34.88        25.74        27.91 
TCGA-EJ-5518 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 
       39.29        41.82        23.80        29.92        17.06        26.99 
TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7317 TCGA-EJ-7327 TCGA-EJ-7330 
       48.99        61.15         9.70         9.37         5.75         6.28 
TCGA-EJ-7331 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 
        0.30         2.10         4.31         5.49         8.48         2.60 
TCGA-EJ-7788 TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 
        1.71         2.30         7.13        17.29         1.41         9.34 
TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6329 
       63.98        26.99        66.12         5.33         1.05        30.35 
TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6343 TCGA-G9-6348 
       65.92        63.29        54.87        54.21        18.21        37.61 
TCGA-G9-6351 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 
       39.95        27.85        32.88        33.14        27.02        32.65 
TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 
       27.65        26.43         3.32        28.77        27.98        26.50 
TCGA-G9-6371 TCGA-G9-6378 TCGA-G9-6385 TCGA-G9-6496 TCGA-G9-7519 TCGA-G9-7522 
       27.81        21.83        11.70        33.34        15.02        14.83 
TCGA-G9-7523 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 TCGA-HC-7079 
       10.65        16.83         1.02         2.01        65.98         2.93 
TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 
        2.01         1.02         0.99         0.99         2.07         1.74 
TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-7821 
        2.04         2.01         1.12         3.22         1.48         1.84 
TCGA-HC-8265 TCGA-HI-7169 TCGA-HI-7170 TCGA-J4-8198 
        2.04        64.08        62.43         3.22 

  DEL PEAK 20(17P13.1) MUTATED DEL PEAK 20(17P13.1) WILD-TYPE 
                          0.76                           0.30 
  DEL PEAK 20(17P13.1) MUTATED DEL PEAK 20(17P13.1) WILD-TYPE 
                         66.02                          66.12 
  DEL PEAK 20(17P13.1) MUTATED DEL PEAK 20(17P13.1) WILD-TYPE 
                        14.515                         15.040 
[1] "0.8 - 66.0 (14.5)" "0.3 - 66.1 (15.0)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-HC-7213                     TCGA-HC-7230 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-HC-7231                     TCGA-HC-7736 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-HC-7747                     TCGA-HC-7748 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-HC-7213                     TCGA-HC-7230 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-HC-7231                     TCGA-HC-7736 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-HC-7747                     TCGA-HC-7748 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK 20(17P13.1) WILD-TYPE"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-HC-7213                     TCGA-HC-7230 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-HC-7231                     TCGA-HC-7736 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-HC-7747                     TCGA-HC-7748 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "DEL PEAK 20(17P13.1) MUTATED"   "DEL PEAK 20(17P13.1) MUTATED" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 20(17P13.1) WILD-TYPE" "DEL PEAK 20(17P13.1) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 20(17P13.1) MUTATED" "DEL PEAK 20(17P13.1) WILD-TYPE" 
[1] "hr="     "1.6e+09"
D41V2, continuous
                                vv
clus                             T2 T3 T4
  DEL PEAK 20(17P13.1) MUTATED   12 28  2
  DEL PEAK 20(17P13.1) WILD-TYPE 57 57  3
D41V3, multiclass
    clus
vv   DEL PEAK 20(17P13.1) MUTATED DEL PEAK 20(17P13.1) WILD-TYPE
  T2                           12                             57
  T3                           28                             57
  T4                            2                              3
D41V4, binary
                                cls
clus                              0  1
  DEL PEAK 20(17P13.1) MUTATED   32  7
  DEL PEAK 20(17P13.1) WILD-TYPE 94  8
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 20(17P13.1) MUTATED     32    7
  DEL PEAK 20(17P13.1) WILD-TYPE   94    8
   clus
vv  DEL PEAK 20(17P13.1) MUTATED DEL PEAK 20(17P13.1) WILD-TYPE
  0                           32                             94
  1                            7                              8
                                vv
clus                             R0 R1 RX
  DEL PEAK 20(17P13.1) MUTATED   31  9  0
  DEL PEAK 20(17P13.1) WILD-TYPE 88 22  3
D41V5, multiclass
    clus
vv   DEL PEAK 20(17P13.1) MUTATED DEL PEAK 20(17P13.1) WILD-TYPE
  R0                           31                             88
  R1                            9                             22
  RX                            0                              3
D41V6, continuous

Clustering(42) Variable = DEL PEAK 21(17Q21.31) MUTATION ANALYSIS
D42V1, survival
                                 sevent
clus2                               0   1
  DEL PEAK 21(17Q21.31) MUTATED    29   1
  DEL PEAK 21(17Q21.31) WILD-TYPE 130   0
  DEL PEAK 21(17Q21.31) MUTATED DEL PEAK 21(17Q21.31) WILD-TYPE 
                             30                             130 
  DEL PEAK 21(17Q21.31) MUTATED DEL PEAK 21(17Q21.31) WILD-TYPE 
                              1                               0 
$`DEL PEAK 21(17Q21.31) MUTATED`
TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5750 TCGA-CH-5751 TCGA-CH-5752 TCGA-CH-5768 
       22.06         1.02        12.99        35.01        30.97        24.03 
TCGA-CH-5771 TCGA-EJ-5507 TCGA-EJ-5511 TCGA-EJ-5516 TCGA-EJ-5521 TCGA-EJ-5524 
       12.99         5.98        25.91        25.74        27.68        27.42 
TCGA-EJ-5542 TCGA-EJ-7314 TCGA-EJ-7781 TCGA-EJ-7788 TCGA-EJ-7793 TCGA-EJ-8472 
       17.06         9.70         5.56         1.71         1.41        66.12 
TCGA-G9-6348 TCGA-G9-6377 TCGA-G9-6499 TCGA-HC-7075 TCGA-HC-7077 TCGA-HC-7209 
       37.61        17.03        36.46         2.01        65.98         1.02 
TCGA-HC-7213 TCGA-HC-7744 TCGA-HC-7748 TCGA-HI-7168 TCGA-HI-7171 TCGA-J4-8198 
        1.97         1.68         2.04        65.92        66.02         3.22 

$`DEL PEAK 21(17Q21.31) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5744 TCGA-CH-5746 
        2.99         6.97        12.99        13.94         1.97        24.03 
TCGA-CH-5748 TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 TCGA-CH-5762 TCGA-CH-5763 
        1.02         1.02         2.04         0.92        44.02        12.00 
TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5769 TCGA-CH-5772 
        1.02        23.01         1.02        15.06         2.04        15.95 
TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 
       26.96         9.96        32.02        33.01         2.99        28.96 
TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 
       12.43        19.89        19.53        13.02        17.62        17.49 
TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 
       23.97         8.02        17.42         7.53        14.70        11.70 
TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 
       29.82        36.03        24.23        25.71        23.80        34.88 
TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5522 TCGA-EJ-5525 TCGA-EJ-5526 
       27.91        39.29        37.91        46.13        25.97        18.64 
TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-7115 TCGA-EJ-7123 
       13.05        41.82        23.80        29.92        26.99        48.99 
TCGA-EJ-7125 TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 
       61.15         9.50         9.37         7.66         5.75         5.59 
TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 
        6.28         0.30         2.10         4.31         5.49         8.48 
TCGA-EJ-7786 TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7794 TCGA-EJ-7797 
        2.60         2.30         7.13        17.29         9.34         6.15 
TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 
       63.98        26.99         5.33         1.05        30.35        65.92 
TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6351 
       63.29        54.87        54.21        43.99        18.21        39.95 
TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 
       27.85        32.88        33.14        27.02        32.65        27.65 
TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 
       26.43         3.32        28.77        27.98        26.50        27.81 
TCGA-G9-6373 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 
       16.60        21.83        12.82        11.70        47.41        33.34 
TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 TCGA-G9-7523 TCGA-G9-7525 
       22.16        15.02        15.98        14.83        10.65        16.83 
TCGA-H9-7775 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 TCGA-HC-7212 
        1.02         5.33         2.93         2.01         0.99         1.02 
TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7742 
        1.68         2.37         0.99         2.07         1.74         1.48 
TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-7821 
        1.87         2.01         1.12         3.22         1.48         1.84 
TCGA-HC-8265 TCGA-HC-A4ZV TCGA-HI-7169 TCGA-HI-7170 
        2.04         0.76        64.08        62.43 

  DEL PEAK 21(17Q21.31) MUTATED DEL PEAK 21(17Q21.31) WILD-TYPE 
                           1.02                            0.30 
  DEL PEAK 21(17Q21.31) MUTATED DEL PEAK 21(17Q21.31) WILD-TYPE 
                          66.12                           65.92 
  DEL PEAK 21(17Q21.31) MUTATED DEL PEAK 21(17Q21.31) WILD-TYPE 
                         17.045                          14.925 
[1] "1.0 - 66.1 (17.0)" "0.3 - 65.9 (14.9)"
                     TCGA-CH-5737                      TCGA-CH-5738 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
  "DEL PEAK 21(17Q21.31) MUTATED"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-CH-5741                      TCGA-CH-5743 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-CH-5751                      TCGA-CH-5752 
  "DEL PEAK 21(17Q21.31) MUTATED"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5761                      TCGA-CH-5762 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5765                      TCGA-CH-5766 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-CH-5769                      TCGA-CH-5771 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-CH-5772                      TCGA-CH-5788 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5791                      TCGA-CH-5792 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7797                      TCGA-EJ-8469 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-8470                      TCGA-EJ-8472 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-EJ-A46B                      TCGA-FC-7708 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6329                      TCGA-G9-6332 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6364                      TCGA-G9-6365 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6377                      TCGA-G9-6378 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-7519                      TCGA-G9-7521 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-7522                      TCGA-G9-7523 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7075                      TCGA-HC-7077 
  "DEL PEAK 21(17Q21.31) MUTATED"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-HC-7078                      TCGA-HC-7079 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7080                      TCGA-HC-7209 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-HC-7211                      TCGA-HC-7212 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7213                      TCGA-HC-7230 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7231                      TCGA-HC-7736 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7737                      TCGA-HC-7740 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7742                      TCGA-HC-7744 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-HC-7747                      TCGA-HC-7748 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-HC-7749                      TCGA-HC-7750 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7752                      TCGA-HC-7818 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7821                      TCGA-HC-8265 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-A4ZV                      TCGA-HI-7168 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "DEL PEAK 21(17Q21.31) MUTATED"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-CH-5737                      TCGA-CH-5738 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
  "DEL PEAK 21(17Q21.31) MUTATED"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-CH-5741                      TCGA-CH-5743 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-CH-5751                      TCGA-CH-5752 
  "DEL PEAK 21(17Q21.31) MUTATED"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5761                      TCGA-CH-5762 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5765                      TCGA-CH-5766 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-CH-5769                      TCGA-CH-5771 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-CH-5772                      TCGA-CH-5788 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5791                      TCGA-CH-5792 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7797                      TCGA-EJ-8469 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-8470                      TCGA-EJ-8472 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-EJ-A46B                      TCGA-FC-7708 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6329                      TCGA-G9-6332 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6364                      TCGA-G9-6365 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6377                      TCGA-G9-6378 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-7519                      TCGA-G9-7521 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-7522                      TCGA-G9-7523 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7075                      TCGA-HC-7077 
  "DEL PEAK 21(17Q21.31) MUTATED"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-HC-7078                      TCGA-HC-7079 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7080                      TCGA-HC-7209 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-HC-7211                      TCGA-HC-7212 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7213                      TCGA-HC-7230 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7231                      TCGA-HC-7736 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7737                      TCGA-HC-7740 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7742                      TCGA-HC-7744 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-HC-7747                      TCGA-HC-7748 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-HC-7749                      TCGA-HC-7750 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7752                      TCGA-HC-7818 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7821                      TCGA-HC-8265 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-A4ZV                      TCGA-HI-7168 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "DEL PEAK 21(17Q21.31) MUTATED"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-CH-5737                      TCGA-CH-5738 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5739                      TCGA-CH-5740 
  "DEL PEAK 21(17Q21.31) MUTATED"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-CH-5741                      TCGA-CH-5743 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5744                      TCGA-CH-5746 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5748                      TCGA-CH-5750 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-CH-5751                      TCGA-CH-5752 
  "DEL PEAK 21(17Q21.31) MUTATED"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-CH-5753                      TCGA-CH-5754 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5761                      TCGA-CH-5762 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5763                      TCGA-CH-5764 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5765                      TCGA-CH-5766 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5767                      TCGA-CH-5768 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-CH-5769                      TCGA-CH-5771 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-CH-5772                      TCGA-CH-5788 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5789                      TCGA-CH-5790 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5791                      TCGA-CH-5792 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-CH-5794                      TCGA-EJ-5494 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5495                      TCGA-EJ-5496 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5497                      TCGA-EJ-5498 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5499                      TCGA-EJ-5501 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5502                      TCGA-EJ-5503 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5504                      TCGA-EJ-5505 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5506                      TCGA-EJ-5507 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-EJ-5508                      TCGA-EJ-5509 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5510                      TCGA-EJ-5511 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-EJ-5512                      TCGA-EJ-5514 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5515                      TCGA-EJ-5516 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-EJ-5517                      TCGA-EJ-5518 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5519                      TCGA-EJ-5521 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-EJ-5522                      TCGA-EJ-5524 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-EJ-5525                      TCGA-EJ-5526 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5527                      TCGA-EJ-5530 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5531                      TCGA-EJ-5532 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-5542                      TCGA-EJ-7115 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7123                      TCGA-EJ-7125 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7314                      TCGA-EJ-7315 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7317                      TCGA-EJ-7321 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7327                      TCGA-EJ-7328 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7330                      TCGA-EJ-7331 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7781                      TCGA-EJ-7782 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7783                      TCGA-EJ-7784 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7785                      TCGA-EJ-7786 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7788                      TCGA-EJ-7789 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7791                      TCGA-EJ-7792 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7793                      TCGA-EJ-7794 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-7797                      TCGA-EJ-8469 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-EJ-8470                      TCGA-EJ-8472 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-EJ-A46B                      TCGA-FC-7708 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6329                      TCGA-G9-6332 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6333                      TCGA-G9-6336 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6338                      TCGA-G9-6342 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6343                      TCGA-G9-6348 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-G9-6351                      TCGA-G9-6353 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6356                      TCGA-G9-6361 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6362                      TCGA-G9-6363 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6364                      TCGA-G9-6365 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6366                      TCGA-G9-6367 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6369                      TCGA-G9-6370 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6371                      TCGA-G9-6373 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6377                      TCGA-G9-6378 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6384                      TCGA-G9-6385 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6494                      TCGA-G9-6496 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-6499                      TCGA-G9-7510 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-7519                      TCGA-G9-7521 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-7522                      TCGA-G9-7523 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-G9-7525                      TCGA-H9-7775 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7075                      TCGA-HC-7077 
  "DEL PEAK 21(17Q21.31) MUTATED"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-HC-7078                      TCGA-HC-7079 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7080                      TCGA-HC-7209 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-HC-7211                      TCGA-HC-7212 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7213                      TCGA-HC-7230 
  "DEL PEAK 21(17Q21.31) MUTATED" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7231                      TCGA-HC-7736 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7737                      TCGA-HC-7740 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7742                      TCGA-HC-7744 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-HC-7747                      TCGA-HC-7748 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-HC-7749                      TCGA-HC-7750 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7752                      TCGA-HC-7818 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-7821                      TCGA-HC-8265 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HC-A4ZV                      TCGA-HI-7168 
"DEL PEAK 21(17Q21.31) WILD-TYPE"   "DEL PEAK 21(17Q21.31) MUTATED" 
                     TCGA-HI-7169                      TCGA-HI-7170 
"DEL PEAK 21(17Q21.31) WILD-TYPE" "DEL PEAK 21(17Q21.31) WILD-TYPE" 
                     TCGA-HI-7171                      TCGA-J4-8198 
  "DEL PEAK 21(17Q21.31) MUTATED"   "DEL PEAK 21(17Q21.31) MUTATED" 
[1] "hr=" "1"  
D42V2, continuous
                                 vv
clus                              T2 T3 T4
  DEL PEAK 21(17Q21.31) MUTATED   10 19  1
  DEL PEAK 21(17Q21.31) WILD-TYPE 59 66  4
D42V3, multiclass
    clus
vv   DEL PEAK 21(17Q21.31) MUTATED DEL PEAK 21(17Q21.31) WILD-TYPE
  T2                            10                              59
  T3                            19                              66
  T4                             1                               4
D42V4, binary
                                 cls
clus                                0   1
  DEL PEAK 21(17Q21.31) MUTATED    24   2
  DEL PEAK 21(17Q21.31) WILD-TYPE 102  13
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 21(17Q21.31) MUTATED     24    2
  DEL PEAK 21(17Q21.31) WILD-TYPE  102   13
   clus
vv  DEL PEAK 21(17Q21.31) MUTATED DEL PEAK 21(17Q21.31) WILD-TYPE
  0                            24                             102
  1                             2                              13
                                 vv
clus                              R0 R1 RX
  DEL PEAK 21(17Q21.31) MUTATED   26  3  0
  DEL PEAK 21(17Q21.31) WILD-TYPE 93 28  3
D42V5, multiclass
    clus
vv   DEL PEAK 21(17Q21.31) MUTATED DEL PEAK 21(17Q21.31) WILD-TYPE
  R0                            26                              93
  R1                             3                              28
  RX                             0                               3
D42V6, continuous

Clustering(43) Variable = DEL PEAK 22(18Q23) MUTATION ANALYSIS
D43V1, survival
                              sevent
clus2                            0   1
  DEL PEAK 22(18Q23) MUTATED    48   1
  DEL PEAK 22(18Q23) WILD-TYPE 111   0
  DEL PEAK 22(18Q23) MUTATED DEL PEAK 22(18Q23) WILD-TYPE 
                          49                          111 
  DEL PEAK 22(18Q23) MUTATED DEL PEAK 22(18Q23) WILD-TYPE 
                           1                            0 
$`DEL PEAK 22(18Q23) MUTATED`
TCGA-CH-5740 TCGA-CH-5744 TCGA-CH-5751 TCGA-CH-5753 TCGA-CH-5754 TCGA-CH-5761 
        1.02         1.97        35.01         1.02         2.04         0.92 
TCGA-CH-5762 TCGA-CH-5768 TCGA-CH-5772 TCGA-CH-5791 TCGA-EJ-5495 TCGA-EJ-5504 
       44.02        24.03        15.95        33.01        19.89         7.53 
TCGA-EJ-5507 TCGA-EJ-5511 TCGA-EJ-5514 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5524 
        5.98        25.91        23.80        27.91        39.29        27.42 
TCGA-EJ-5525 TCGA-EJ-5527 TCGA-EJ-7315 TCGA-EJ-7781 TCGA-EJ-7794 TCGA-EJ-8470 
       25.97        13.05         9.50         5.56         9.34        26.99 
TCGA-EJ-8472 TCGA-G9-6329 TCGA-G9-6342 TCGA-G9-6348 TCGA-G9-6351 TCGA-G9-6373 
       66.12        30.35        43.99        37.61        39.95        16.60 
TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6499 TCGA-G9-7521 TCGA-G9-7523 
       17.03        21.83        12.82        36.46        15.98        10.65 
TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7211 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7742 
       65.98         5.33         0.99         1.97         1.68         1.48 
TCGA-HC-7748 TCGA-HC-7749 TCGA-HC-7821 TCGA-HC-A4ZV TCGA-HI-7168 TCGA-HI-7170 
        2.04         2.01         1.84         0.76        65.92        62.43 
TCGA-HI-7171 
       66.02 

$`DEL PEAK 22(18Q23) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5741 TCGA-CH-5743 TCGA-CH-5746 
        2.99         6.97        22.06        12.99        13.94        24.03 
TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 
        1.02        12.99        30.97        12.00         1.02        23.01 
TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5788 TCGA-CH-5789 
        1.02        15.06         2.04        12.99        26.96         9.96 
TCGA-CH-5790 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5496 TCGA-EJ-5497 
       32.02         2.99        28.96        12.43        19.53        13.02 
TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5505 
       17.62        17.49        23.97         8.02        17.42        14.70 
TCGA-EJ-5506 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5512 TCGA-EJ-5515 
       11.70        29.82        36.03        24.23        25.71        34.88 
TCGA-EJ-5516 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 TCGA-EJ-5526 TCGA-EJ-5530 
       25.74        37.91        27.68        46.13        18.64        41.82 
TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 
       23.80        29.92        17.06        26.99        48.99        61.15 
TCGA-EJ-7314 TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 
        9.70         9.37         7.66         5.75         5.59         6.28 
TCGA-EJ-7331 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 
        0.30         2.10         4.31         5.49         8.48         2.60 
TCGA-EJ-7788 TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7797 
        1.71         2.30         7.13        17.29         1.41         6.15 
TCGA-EJ-8469 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6336 
       63.98         5.33         1.05        65.92        63.29        54.87 
TCGA-G9-6338 TCGA-G9-6343 TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 
       54.21        18.21        27.85        32.88        33.14        27.02 
TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 
       32.65        27.65        26.43         3.32        28.77        27.98 
TCGA-G9-6370 TCGA-G9-6371 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 TCGA-G9-7510 
       26.50        27.81        11.70        47.41        33.34        22.16 
TCGA-G9-7519 TCGA-G9-7522 TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7079 
       15.02        14.83        16.83         1.02         2.01         2.93 
TCGA-HC-7080 TCGA-HC-7209 TCGA-HC-7212 TCGA-HC-7231 TCGA-HC-7736 TCGA-HC-7737 
        2.01         1.02         1.02         2.37         0.99         2.07 
TCGA-HC-7740 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 
        1.74         1.68         1.87         1.12         3.22         1.48 
TCGA-HC-8265 TCGA-HI-7169 TCGA-J4-8198 
        2.04        64.08         3.22 

  DEL PEAK 22(18Q23) MUTATED DEL PEAK 22(18Q23) WILD-TYPE 
                        0.76                         0.30 
  DEL PEAK 22(18Q23) MUTATED DEL PEAK 22(18Q23) WILD-TYPE 
                       66.12                        65.92 
  DEL PEAK 22(18Q23) MUTATED DEL PEAK 22(18Q23) WILD-TYPE 
                        16.6                         14.7 
[1] "0.8 - 66.1 (16.6)" "0.3 - 65.9 (14.7)"
                  TCGA-CH-5737                   TCGA-CH-5738 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5739                   TCGA-CH-5740 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-CH-5741                   TCGA-CH-5743 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5744                   TCGA-CH-5746 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5748                   TCGA-CH-5750 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5751                   TCGA-CH-5752 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5753                   TCGA-CH-5754 
  "DEL PEAK 22(18Q23) MUTATED"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-CH-5761                   TCGA-CH-5762 
  "DEL PEAK 22(18Q23) MUTATED"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-CH-5763                   TCGA-CH-5764 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5765                   TCGA-CH-5766 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5767                   TCGA-CH-5768 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-CH-5769                   TCGA-CH-5771 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5772                   TCGA-CH-5788 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5789                   TCGA-CH-5790 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5791                   TCGA-CH-5792 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5794                   TCGA-EJ-5494 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5495                   TCGA-EJ-5496 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5497                   TCGA-EJ-5498 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5499                   TCGA-EJ-5501 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5502                   TCGA-EJ-5503 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5504                   TCGA-EJ-5505 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5506                   TCGA-EJ-5507 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-5508                   TCGA-EJ-5509 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5510                   TCGA-EJ-5511 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-5512                   TCGA-EJ-5514 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-5515                   TCGA-EJ-5516 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5517                   TCGA-EJ-5518 
  "DEL PEAK 22(18Q23) MUTATED"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-5519                   TCGA-EJ-5521 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5522                   TCGA-EJ-5524 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-5525                   TCGA-EJ-5526 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5527                   TCGA-EJ-5530 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5531                   TCGA-EJ-5532 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5542                   TCGA-EJ-7115 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7123                   TCGA-EJ-7125 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7314                   TCGA-EJ-7315 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-7317                   TCGA-EJ-7321 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7327                   TCGA-EJ-7328 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7330                   TCGA-EJ-7331 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7781                   TCGA-EJ-7782 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7783                   TCGA-EJ-7784 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7785                   TCGA-EJ-7786 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7788                   TCGA-EJ-7789 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7791                   TCGA-EJ-7792 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7793                   TCGA-EJ-7794 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-7797                   TCGA-EJ-8469 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-8470                   TCGA-EJ-8472 
  "DEL PEAK 22(18Q23) MUTATED"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-A46B                   TCGA-FC-7708 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6329                   TCGA-G9-6332 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6333                   TCGA-G9-6336 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6338                   TCGA-G9-6342 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-G9-6343                   TCGA-G9-6348 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-G9-6351                   TCGA-G9-6353 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6356                   TCGA-G9-6361 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6362                   TCGA-G9-6363 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6364                   TCGA-G9-6365 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6366                   TCGA-G9-6367 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6369                   TCGA-G9-6370 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6371                   TCGA-G9-6373 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-G9-6377                   TCGA-G9-6378 
  "DEL PEAK 22(18Q23) MUTATED"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-G9-6384                   TCGA-G9-6385 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6494                   TCGA-G9-6496 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6499                   TCGA-G9-7510 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-7519                   TCGA-G9-7521 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-G9-7522                   TCGA-G9-7523 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-G9-7525                   TCGA-H9-7775 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7075                   TCGA-HC-7077 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-HC-7078                   TCGA-HC-7079 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7080                   TCGA-HC-7209 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7211                   TCGA-HC-7212 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7213                   TCGA-HC-7230 
  "DEL PEAK 22(18Q23) MUTATED"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-HC-7231                   TCGA-HC-7736 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7737                   TCGA-HC-7740 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7742                   TCGA-HC-7744 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7747                   TCGA-HC-7748 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-HC-7749                   TCGA-HC-7750 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7752                   TCGA-HC-7818 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7821                   TCGA-HC-8265 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-A4ZV                   TCGA-HI-7168 
  "DEL PEAK 22(18Q23) MUTATED"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-HI-7169                   TCGA-HI-7170 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-HI-7171                   TCGA-J4-8198 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5737                   TCGA-CH-5738 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5739                   TCGA-CH-5740 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-CH-5741                   TCGA-CH-5743 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5744                   TCGA-CH-5746 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5748                   TCGA-CH-5750 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5751                   TCGA-CH-5752 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5753                   TCGA-CH-5754 
  "DEL PEAK 22(18Q23) MUTATED"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-CH-5761                   TCGA-CH-5762 
  "DEL PEAK 22(18Q23) MUTATED"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-CH-5763                   TCGA-CH-5764 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5765                   TCGA-CH-5766 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5767                   TCGA-CH-5768 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-CH-5769                   TCGA-CH-5771 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5772                   TCGA-CH-5788 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5789                   TCGA-CH-5790 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5791                   TCGA-CH-5792 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5794                   TCGA-EJ-5494 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5495                   TCGA-EJ-5496 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5497                   TCGA-EJ-5498 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5499                   TCGA-EJ-5501 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5502                   TCGA-EJ-5503 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5504                   TCGA-EJ-5505 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5506                   TCGA-EJ-5507 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-5508                   TCGA-EJ-5509 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5510                   TCGA-EJ-5511 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-5512                   TCGA-EJ-5514 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-5515                   TCGA-EJ-5516 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5517                   TCGA-EJ-5518 
  "DEL PEAK 22(18Q23) MUTATED"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-5519                   TCGA-EJ-5521 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5522                   TCGA-EJ-5524 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-5525                   TCGA-EJ-5526 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5527                   TCGA-EJ-5530 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5531                   TCGA-EJ-5532 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5542                   TCGA-EJ-7115 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7123                   TCGA-EJ-7125 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7314                   TCGA-EJ-7315 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-7317                   TCGA-EJ-7321 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7327                   TCGA-EJ-7328 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7330                   TCGA-EJ-7331 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7781                   TCGA-EJ-7782 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7783                   TCGA-EJ-7784 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7785                   TCGA-EJ-7786 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7788                   TCGA-EJ-7789 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7791                   TCGA-EJ-7792 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7793                   TCGA-EJ-7794 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-7797                   TCGA-EJ-8469 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-8470                   TCGA-EJ-8472 
  "DEL PEAK 22(18Q23) MUTATED"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-A46B                   TCGA-FC-7708 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6329                   TCGA-G9-6332 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6333                   TCGA-G9-6336 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6338                   TCGA-G9-6342 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-G9-6343                   TCGA-G9-6348 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-G9-6351                   TCGA-G9-6353 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6356                   TCGA-G9-6361 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6362                   TCGA-G9-6363 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6364                   TCGA-G9-6365 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6366                   TCGA-G9-6367 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6369                   TCGA-G9-6370 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6371                   TCGA-G9-6373 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-G9-6377                   TCGA-G9-6378 
  "DEL PEAK 22(18Q23) MUTATED"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-G9-6384                   TCGA-G9-6385 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6494                   TCGA-G9-6496 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6499                   TCGA-G9-7510 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-7519                   TCGA-G9-7521 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-G9-7522                   TCGA-G9-7523 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-G9-7525                   TCGA-H9-7775 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7075                   TCGA-HC-7077 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-HC-7078                   TCGA-HC-7079 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7080                   TCGA-HC-7209 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7211                   TCGA-HC-7212 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7213                   TCGA-HC-7230 
  "DEL PEAK 22(18Q23) MUTATED"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-HC-7231                   TCGA-HC-7736 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7737                   TCGA-HC-7740 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7742                   TCGA-HC-7744 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7747                   TCGA-HC-7748 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-HC-7749                   TCGA-HC-7750 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7752                   TCGA-HC-7818 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7821                   TCGA-HC-8265 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-A4ZV                   TCGA-HI-7168 
  "DEL PEAK 22(18Q23) MUTATED"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-HI-7169                   TCGA-HI-7170 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-HI-7171                   TCGA-J4-8198 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5737                   TCGA-CH-5738 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5739                   TCGA-CH-5740 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-CH-5741                   TCGA-CH-5743 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5744                   TCGA-CH-5746 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5748                   TCGA-CH-5750 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5751                   TCGA-CH-5752 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5753                   TCGA-CH-5754 
  "DEL PEAK 22(18Q23) MUTATED"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-CH-5761                   TCGA-CH-5762 
  "DEL PEAK 22(18Q23) MUTATED"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-CH-5763                   TCGA-CH-5764 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5765                   TCGA-CH-5766 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5767                   TCGA-CH-5768 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-CH-5769                   TCGA-CH-5771 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5772                   TCGA-CH-5788 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5789                   TCGA-CH-5790 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5791                   TCGA-CH-5792 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-CH-5794                   TCGA-EJ-5494 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5495                   TCGA-EJ-5496 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5497                   TCGA-EJ-5498 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5499                   TCGA-EJ-5501 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5502                   TCGA-EJ-5503 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5504                   TCGA-EJ-5505 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5506                   TCGA-EJ-5507 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-5508                   TCGA-EJ-5509 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5510                   TCGA-EJ-5511 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-5512                   TCGA-EJ-5514 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-5515                   TCGA-EJ-5516 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5517                   TCGA-EJ-5518 
  "DEL PEAK 22(18Q23) MUTATED"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-5519                   TCGA-EJ-5521 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5522                   TCGA-EJ-5524 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-5525                   TCGA-EJ-5526 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5527                   TCGA-EJ-5530 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5531                   TCGA-EJ-5532 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-5542                   TCGA-EJ-7115 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7123                   TCGA-EJ-7125 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7314                   TCGA-EJ-7315 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-7317                   TCGA-EJ-7321 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7327                   TCGA-EJ-7328 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7330                   TCGA-EJ-7331 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7781                   TCGA-EJ-7782 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7783                   TCGA-EJ-7784 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7785                   TCGA-EJ-7786 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7788                   TCGA-EJ-7789 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7791                   TCGA-EJ-7792 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-7793                   TCGA-EJ-7794 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-7797                   TCGA-EJ-8469 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-EJ-8470                   TCGA-EJ-8472 
  "DEL PEAK 22(18Q23) MUTATED"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-EJ-A46B                   TCGA-FC-7708 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6329                   TCGA-G9-6332 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6333                   TCGA-G9-6336 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6338                   TCGA-G9-6342 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-G9-6343                   TCGA-G9-6348 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-G9-6351                   TCGA-G9-6353 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6356                   TCGA-G9-6361 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6362                   TCGA-G9-6363 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6364                   TCGA-G9-6365 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6366                   TCGA-G9-6367 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6369                   TCGA-G9-6370 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6371                   TCGA-G9-6373 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-G9-6377                   TCGA-G9-6378 
  "DEL PEAK 22(18Q23) MUTATED"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-G9-6384                   TCGA-G9-6385 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6494                   TCGA-G9-6496 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-6499                   TCGA-G9-7510 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-G9-7519                   TCGA-G9-7521 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-G9-7522                   TCGA-G9-7523 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-G9-7525                   TCGA-H9-7775 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7075                   TCGA-HC-7077 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-HC-7078                   TCGA-HC-7079 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7080                   TCGA-HC-7209 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7211                   TCGA-HC-7212 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7213                   TCGA-HC-7230 
  "DEL PEAK 22(18Q23) MUTATED"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-HC-7231                   TCGA-HC-7736 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7737                   TCGA-HC-7740 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7742                   TCGA-HC-7744 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7747                   TCGA-HC-7748 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-HC-7749                   TCGA-HC-7750 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7752                   TCGA-HC-7818 
"DEL PEAK 22(18Q23) WILD-TYPE" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-7821                   TCGA-HC-8265 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
                  TCGA-HC-A4ZV                   TCGA-HI-7168 
  "DEL PEAK 22(18Q23) MUTATED"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-HI-7169                   TCGA-HI-7170 
"DEL PEAK 22(18Q23) WILD-TYPE"   "DEL PEAK 22(18Q23) MUTATED" 
                  TCGA-HI-7171                   TCGA-J4-8198 
  "DEL PEAK 22(18Q23) MUTATED" "DEL PEAK 22(18Q23) WILD-TYPE" 
[1] "hr=" "1"  
D43V2, continuous
                              vv
clus                           T2 T3 T4
  DEL PEAK 22(18Q23) MUTATED   17 30  2
  DEL PEAK 22(18Q23) WILD-TYPE 52 55  3
D43V3, multiclass
    clus
vv   DEL PEAK 22(18Q23) MUTATED DEL PEAK 22(18Q23) WILD-TYPE
  T2                         17                           52
  T3                         30                           55
  T4                          2                            3
D43V4, binary
                              cls
clus                            0  1
  DEL PEAK 22(18Q23) MUTATED   35  8
  DEL PEAK 22(18Q23) WILD-TYPE 91  7
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 22(18Q23) MUTATED     35    8
  DEL PEAK 22(18Q23) WILD-TYPE   91    7
   clus
vv  DEL PEAK 22(18Q23) MUTATED DEL PEAK 22(18Q23) WILD-TYPE
  0                         35                           91
  1                          8                            7
                              vv
clus                           R0 R1 RX
  DEL PEAK 22(18Q23) MUTATED   35 12  0
  DEL PEAK 22(18Q23) WILD-TYPE 84 19  3
D43V5, multiclass
    clus
vv   DEL PEAK 22(18Q23) MUTATED DEL PEAK 22(18Q23) WILD-TYPE
  R0                         35                           84
  R1                         12                           19
  RX                          0                            3
D43V6, continuous

Clustering(44) Variable = DEL PEAK 23(19Q13.2) MUTATION ANALYSIS
D44V1, survival
                                sevent
clus2                              0   1
  DEL PEAK 23(19Q13.2) MUTATED    12   1
  DEL PEAK 23(19Q13.2) WILD-TYPE 147   0
  DEL PEAK 23(19Q13.2) MUTATED DEL PEAK 23(19Q13.2) WILD-TYPE 
                            13                            147 
  DEL PEAK 23(19Q13.2) MUTATED DEL PEAK 23(19Q13.2) WILD-TYPE 
                             1                              0 
$`DEL PEAK 23(19Q13.2) MUTATED`
TCGA-CH-5741 TCGA-CH-5751 TCGA-CH-5753 TCGA-EJ-5542 TCGA-EJ-7327 TCGA-EJ-7328 
       12.99        35.01         1.02        17.06         5.75         5.59 
TCGA-EJ-7781 TCGA-G9-7525 TCGA-HC-7078 TCGA-HC-7080 TCGA-HC-7752 TCGA-HC-A4ZV 
        5.56        16.83         5.33         2.01         3.22         0.76 
TCGA-HI-7171 
       66.02 

$`DEL PEAK 23(19Q13.2) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5743 TCGA-CH-5744 
        2.99         6.97        22.06         1.02        13.94         1.97 
TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5754 TCGA-CH-5761 
       24.03         1.02        12.99        30.97         2.04         0.92 
TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5766 TCGA-CH-5767 
       44.02        12.00         1.02        23.01         1.02        15.06 
TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 
       24.03         2.04        12.99        15.95        26.96         9.96 
TCGA-CH-5790 TCGA-CH-5791 TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 
       32.02        33.01         2.99        28.96        12.43        19.89 
TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5498 TCGA-EJ-5499 TCGA-EJ-5501 TCGA-EJ-5502 
       19.53        13.02        17.62        17.49        23.97         8.02 
TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5508 
       17.42         7.53        14.70        11.70         5.98        29.82 
TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 TCGA-EJ-5514 TCGA-EJ-5515 
       36.03        24.23        25.91        25.71        23.80        34.88 
TCGA-EJ-5516 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 
       25.74        27.91        39.29        37.91        27.68        46.13 
TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 
       27.42        25.97        18.64        13.05        41.82        23.80 
TCGA-EJ-5532 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 TCGA-EJ-7315 
       29.92        26.99        48.99        61.15         9.70         9.50 
TCGA-EJ-7317 TCGA-EJ-7321 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7782 TCGA-EJ-7783 
        9.37         7.66         6.28         0.30         2.10         4.31 
TCGA-EJ-7784 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7789 TCGA-EJ-7791 
        5.49         8.48         2.60         1.71         2.30         7.13 
TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8469 TCGA-EJ-8470 
       17.29         1.41         9.34         6.15        63.98        26.99 
TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6332 TCGA-G9-6333 
       66.12         5.33         1.05        30.35        65.92        63.29 
TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6342 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 
       54.87        54.21        43.99        18.21        37.61        39.95 
TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 
       27.85        32.88        33.14        27.02        32.65        27.65 
TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 
       26.43         3.32        28.77        27.98        26.50        27.81 
TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 
       16.60        17.03        21.83        12.82        11.70        47.41 
TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7521 TCGA-G9-7522 
       33.34        36.46        22.16        15.02        15.98        14.83 
TCGA-G9-7523 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7077 TCGA-HC-7079 TCGA-HC-7209 
       10.65         1.02         2.01        65.98         2.93         1.02 
TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 TCGA-HC-7736 
        0.99         1.02         1.97         1.68         2.37         0.99 
TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7748 
        2.07         1.74         1.48         1.68         1.87         2.04 
TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7818 TCGA-HC-7821 TCGA-HC-8265 TCGA-HI-7168 
        2.01         1.12         1.48         1.84         2.04        65.92 
TCGA-HI-7169 TCGA-HI-7170 TCGA-J4-8198 
       64.08        62.43         3.22 

  DEL PEAK 23(19Q13.2) MUTATED DEL PEAK 23(19Q13.2) WILD-TYPE 
                          0.76                           0.30 
  DEL PEAK 23(19Q13.2) MUTATED DEL PEAK 23(19Q13.2) WILD-TYPE 
                         66.02                          66.12 
  DEL PEAK 23(19Q13.2) MUTATED DEL PEAK 23(19Q13.2) WILD-TYPE 
                          5.59                          15.98 
[1] "0.8 - 66.0 (5.6)"  "0.3 - 66.1 (16.0)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
  "DEL PEAK 23(19Q13.2) MUTATED"   "DEL PEAK 23(19Q13.2) MUTATED" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
  "DEL PEAK 23(19Q13.2) MUTATED"   "DEL PEAK 23(19Q13.2) MUTATED" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
  "DEL PEAK 23(19Q13.2) MUTATED"   "DEL PEAK 23(19Q13.2) MUTATED" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 23(19Q13.2) WILD-TYPE" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
  "DEL PEAK 23(19Q13.2) MUTATED" "DEL PEAK 23(19Q13.2) WILD-TYPE" 
[1] "hr="     "1.6e+09"
D44V2, continuous
                                vv
clus                             T2 T3 T4
  DEL PEAK 23(19Q13.2) MUTATED    4  8  1
  DEL PEAK 23(19Q13.2) WILD-TYPE 65 77  4
D44V3, multiclass
    clus
vv   DEL PEAK 23(19Q13.2) MUTATED DEL PEAK 23(19Q13.2) WILD-TYPE
  T2                            4                             65
  T3                            8                             77
  T4                            1                              4
D44V4, binary
                                cls
clus                               0   1
  DEL PEAK 23(19Q13.2) MUTATED    10   3
  DEL PEAK 23(19Q13.2) WILD-TYPE 116  12
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 23(19Q13.2) MUTATED     10    3
  DEL PEAK 23(19Q13.2) WILD-TYPE  116   12
   clus
vv  DEL PEAK 23(19Q13.2) MUTATED DEL PEAK 23(19Q13.2) WILD-TYPE
  0                           10                            116
  1                            3                             12
                                vv
clus                              R0  R1  RX
  DEL PEAK 23(19Q13.2) MUTATED     9   4   0
  DEL PEAK 23(19Q13.2) WILD-TYPE 110  27   3
D44V5, multiclass
    clus
vv   DEL PEAK 23(19Q13.2) MUTATED DEL PEAK 23(19Q13.2) WILD-TYPE
  R0                            9                            110
  R1                            4                             27
  RX                            0                              3
D44V6, continuous

Clustering(45) Variable = DEL PEAK 24(21Q22.2) MUTATION ANALYSIS
D45V1, survival
                                sevent
clus2                              0   1
  DEL PEAK 24(21Q22.2) MUTATED    17   0
  DEL PEAK 24(21Q22.2) WILD-TYPE 142   1
  DEL PEAK 24(21Q22.2) MUTATED DEL PEAK 24(21Q22.2) WILD-TYPE 
                            17                            143 
  DEL PEAK 24(21Q22.2) MUTATED DEL PEAK 24(21Q22.2) WILD-TYPE 
                             0                              1 
$`DEL PEAK 24(21Q22.2) MUTATED`
TCGA-CH-5741 TCGA-CH-5751 TCGA-CH-5753 TCGA-CH-5761 TCGA-CH-5765 TCGA-EJ-5498 
       12.99        35.01         1.02         0.92        23.01        17.62 
TCGA-EJ-5499 TCGA-EJ-5516 TCGA-EJ-5519 TCGA-EJ-7321 TCGA-EJ-7785 TCGA-G9-6329 
       17.49        25.74        37.91         7.66         8.48        30.35 
TCGA-G9-6342 TCGA-G9-7521 TCGA-HC-7077 TCGA-HC-7748 TCGA-HC-7821 
       43.99        15.98        65.98         2.04         1.84 

$`DEL PEAK 24(21Q22.2) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5743 TCGA-CH-5744 
        2.99         6.97        22.06         1.02        13.94         1.97 
TCGA-CH-5746 TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5752 TCGA-CH-5754 TCGA-CH-5762 
       24.03         1.02        12.99        30.97         2.04        44.02 
TCGA-CH-5763 TCGA-CH-5764 TCGA-CH-5766 TCGA-CH-5767 TCGA-CH-5768 TCGA-CH-5769 
       12.00         1.02         1.02        15.06        24.03         2.04 
TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5790 TCGA-CH-5791 
       12.99        15.95        26.96         9.96        32.02        33.01 
TCGA-CH-5792 TCGA-CH-5794 TCGA-EJ-5494 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 
        2.99        28.96        12.43        19.89        19.53        13.02 
TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 TCGA-EJ-5506 
       23.97         8.02        17.42         7.53        14.70        11.70 
TCGA-EJ-5507 TCGA-EJ-5508 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5512 
        5.98        29.82        36.03        24.23        25.91        25.71 
TCGA-EJ-5514 TCGA-EJ-5515 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5521 TCGA-EJ-5522 
       23.80        34.88        27.91        39.29        27.68        46.13 
TCGA-EJ-5524 TCGA-EJ-5525 TCGA-EJ-5526 TCGA-EJ-5527 TCGA-EJ-5530 TCGA-EJ-5531 
       27.42        25.97        18.64        13.05        41.82        23.80 
TCGA-EJ-5532 TCGA-EJ-5542 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 
       29.92        17.06        26.99        48.99        61.15         9.70 
TCGA-EJ-7315 TCGA-EJ-7317 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 
        9.50         9.37         5.75         5.59         6.28         0.30 
TCGA-EJ-7781 TCGA-EJ-7782 TCGA-EJ-7783 TCGA-EJ-7784 TCGA-EJ-7786 TCGA-EJ-7788 
        5.56         2.10         4.31         5.49         2.60         1.71 
TCGA-EJ-7789 TCGA-EJ-7791 TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 
        2.30         7.13        17.29         1.41         9.34         6.15 
TCGA-EJ-8469 TCGA-EJ-8470 TCGA-EJ-8472 TCGA-EJ-A46B TCGA-FC-7708 TCGA-G9-6332 
       63.98        26.99        66.12         5.33         1.05        65.92 
TCGA-G9-6333 TCGA-G9-6336 TCGA-G9-6338 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 
       63.29        54.87        54.21        18.21        37.61        39.95 
TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 
       27.85        32.88        33.14        27.02        32.65        27.65 
TCGA-G9-6365 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 TCGA-G9-6370 TCGA-G9-6371 
       26.43         3.32        28.77        27.98        26.50        27.81 
TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 
       16.60        17.03        21.83        12.82        11.70        47.41 
TCGA-G9-6496 TCGA-G9-6499 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7522 TCGA-G9-7523 
       33.34        36.46        22.16        15.02        14.83        10.65 
TCGA-G9-7525 TCGA-H9-7775 TCGA-HC-7075 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 
       16.83         1.02         2.01         5.33         2.93         2.01 
TCGA-HC-7209 TCGA-HC-7211 TCGA-HC-7212 TCGA-HC-7213 TCGA-HC-7230 TCGA-HC-7231 
        1.02         0.99         1.02         1.97         1.68         2.37 
TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7742 TCGA-HC-7744 TCGA-HC-7747 
        0.99         2.07         1.74         1.48         1.68         1.87 
TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 TCGA-HC-8265 TCGA-HC-A4ZV 
        2.01         1.12         3.22         1.48         2.04         0.76 
TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 TCGA-J4-8198 
       65.92        64.08        62.43        66.02         3.22 

  DEL PEAK 24(21Q22.2) MUTATED DEL PEAK 24(21Q22.2) WILD-TYPE 
                          0.92                           0.30 
  DEL PEAK 24(21Q22.2) MUTATED DEL PEAK 24(21Q22.2) WILD-TYPE 
                         65.98                          66.12 
  DEL PEAK 24(21Q22.2) MUTATED DEL PEAK 24(21Q22.2) WILD-TYPE 
                         17.49                          14.83 
[1] "0.9 - 66.0 (17.5)" "0.3 - 66.1 (14.8)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 24(21Q22.2) WILD-TYPE"   "DEL PEAK 24(21Q22.2) MUTATED" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 24(21Q22.2) WILD-TYPE"   "DEL PEAK 24(21Q22.2) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 24(21Q22.2) WILD-TYPE"   "DEL PEAK 24(21Q22.2) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 24(21Q22.2) WILD-TYPE"   "DEL PEAK 24(21Q22.2) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 24(21Q22.2) WILD-TYPE"   "DEL PEAK 24(21Q22.2) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 24(21Q22.2) WILD-TYPE"   "DEL PEAK 24(21Q22.2) MUTATED" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 24(21Q22.2) WILD-TYPE"   "DEL PEAK 24(21Q22.2) MUTATED" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 24(21Q22.2) WILD-TYPE"   "DEL PEAK 24(21Q22.2) MUTATED" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 24(21Q22.2) WILD-TYPE"   "DEL PEAK 24(21Q22.2) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 24(21Q22.2) WILD-TYPE"   "DEL PEAK 24(21Q22.2) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 24(21Q22.2) WILD-TYPE"   "DEL PEAK 24(21Q22.2) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 24(21Q22.2) WILD-TYPE"   "DEL PEAK 24(21Q22.2) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 24(21Q22.2) WILD-TYPE"   "DEL PEAK 24(21Q22.2) MUTATED" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 24(21Q22.2) WILD-TYPE"   "DEL PEAK 24(21Q22.2) MUTATED" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5765                     TCGA-CH-5766 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5769                     TCGA-CH-5771 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5791                     TCGA-CH-5792 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
"DEL PEAK 24(21Q22.2) WILD-TYPE"   "DEL PEAK 24(21Q22.2) MUTATED" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 24(21Q22.2) WILD-TYPE"   "DEL PEAK 24(21Q22.2) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 24(21Q22.2) WILD-TYPE"   "DEL PEAK 24(21Q22.2) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 24(21Q22.2) WILD-TYPE"   "DEL PEAK 24(21Q22.2) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6364                     TCGA-G9-6365 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6377                     TCGA-G9-6378 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 24(21Q22.2) WILD-TYPE"   "DEL PEAK 24(21Q22.2) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 24(21Q22.2) WILD-TYPE"   "DEL PEAK 24(21Q22.2) MUTATED" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 24(21Q22.2) WILD-TYPE"   "DEL PEAK 24(21Q22.2) MUTATED" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
  "DEL PEAK 24(21Q22.2) MUTATED" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 24(21Q22.2) WILD-TYPE" "DEL PEAK 24(21Q22.2) WILD-TYPE" 
[1] "hr=" "1"  
D45V2, continuous
                                vv
clus                             T2 T3 T4
  DEL PEAK 24(21Q22.2) MUTATED    3 13  1
  DEL PEAK 24(21Q22.2) WILD-TYPE 66 72  4
D45V3, multiclass
    clus
vv   DEL PEAK 24(21Q22.2) MUTATED DEL PEAK 24(21Q22.2) WILD-TYPE
  T2                            3                             66
  T3                           13                             72
  T4                            1                              4
D45V4, binary
                                cls
clus                               0   1
  DEL PEAK 24(21Q22.2) MUTATED     8   6
  DEL PEAK 24(21Q22.2) WILD-TYPE 118   9
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 24(21Q22.2) MUTATED      8    6
  DEL PEAK 24(21Q22.2) WILD-TYPE  118    9
   clus
vv  DEL PEAK 24(21Q22.2) MUTATED DEL PEAK 24(21Q22.2) WILD-TYPE
  0                            8                            118
  1                            6                              9
                                vv
clus                              R0  R1  RX
  DEL PEAK 24(21Q22.2) MUTATED    14   2   0
  DEL PEAK 24(21Q22.2) WILD-TYPE 105  29   3
D45V5, multiclass
    clus
vv   DEL PEAK 24(21Q22.2) MUTATED DEL PEAK 24(21Q22.2) WILD-TYPE
  R0                           14                            105
  R1                            2                             29
  RX                            0                              3
D45V6, continuous

Clustering(46) Variable = DEL PEAK 25(21Q22.3) MUTATION ANALYSIS
D46V1, survival
                                sevent
clus2                              0   1
  DEL PEAK 25(21Q22.3) MUTATED    52   0
  DEL PEAK 25(21Q22.3) WILD-TYPE 107   1
  DEL PEAK 25(21Q22.3) MUTATED DEL PEAK 25(21Q22.3) WILD-TYPE 
                            52                            108 
  DEL PEAK 25(21Q22.3) MUTATED DEL PEAK 25(21Q22.3) WILD-TYPE 
                             0                              1 
$`DEL PEAK 25(21Q22.3) MUTATED`
TCGA-CH-5741 TCGA-CH-5746 TCGA-CH-5751 TCGA-CH-5752 TCGA-CH-5753 TCGA-CH-5754 
       12.99        24.03        35.01        30.97         1.02         2.04 
TCGA-CH-5761 TCGA-CH-5764 TCGA-CH-5765 TCGA-CH-5768 TCGA-CH-5769 TCGA-CH-5790 
        0.92         1.02        23.01        24.03         2.04        32.02 
TCGA-CH-5791 TCGA-CH-5794 TCGA-EJ-5495 TCGA-EJ-5496 TCGA-EJ-5497 TCGA-EJ-5499 
       33.01        28.96        19.89        19.53        13.02        17.49 
TCGA-EJ-5508 TCGA-EJ-5512 TCGA-EJ-5516 TCGA-EJ-5519 TCGA-EJ-5521 TCGA-EJ-5522 
       29.82        25.71        25.74        37.91        27.68        46.13 
TCGA-EJ-5524 TCGA-EJ-5526 TCGA-EJ-5542 TCGA-EJ-7315 TCGA-EJ-7321 TCGA-EJ-7783 
       27.42        18.64        17.06         9.50         7.66         4.31 
TCGA-EJ-7784 TCGA-EJ-8469 TCGA-EJ-8472 TCGA-FC-7708 TCGA-G9-6329 TCGA-G9-6336 
        5.49        63.98        66.12         1.05        30.35        54.87 
TCGA-G9-6342 TCGA-G9-6362 TCGA-G9-6363 TCGA-G9-6364 TCGA-G9-6365 TCGA-G9-6371 
       43.99        27.02        32.65        27.65        26.43        27.81 
TCGA-G9-6373 TCGA-G9-6377 TCGA-G9-7521 TCGA-G9-7525 TCGA-HC-7209 TCGA-HC-7213 
       16.60        17.03        15.98        16.83         1.02         1.97 
TCGA-HC-7231 TCGA-HC-7748 TCGA-HC-7821 TCGA-J4-8198 
        2.37         2.04         1.84         3.22 

$`DEL PEAK 25(21Q22.3) WILD-TYPE`
TCGA-CH-5737 TCGA-CH-5738 TCGA-CH-5739 TCGA-CH-5740 TCGA-CH-5743 TCGA-CH-5744 
        2.99         6.97        22.06         1.02        13.94         1.97 
TCGA-CH-5748 TCGA-CH-5750 TCGA-CH-5762 TCGA-CH-5763 TCGA-CH-5766 TCGA-CH-5767 
        1.02        12.99        44.02        12.00         1.02        15.06 
TCGA-CH-5771 TCGA-CH-5772 TCGA-CH-5788 TCGA-CH-5789 TCGA-CH-5792 TCGA-EJ-5494 
       12.99        15.95        26.96         9.96         2.99        12.43 
TCGA-EJ-5498 TCGA-EJ-5501 TCGA-EJ-5502 TCGA-EJ-5503 TCGA-EJ-5504 TCGA-EJ-5505 
       17.62        23.97         8.02        17.42         7.53        14.70 
TCGA-EJ-5506 TCGA-EJ-5507 TCGA-EJ-5509 TCGA-EJ-5510 TCGA-EJ-5511 TCGA-EJ-5514 
       11.70         5.98        36.03        24.23        25.91        23.80 
TCGA-EJ-5515 TCGA-EJ-5517 TCGA-EJ-5518 TCGA-EJ-5525 TCGA-EJ-5527 TCGA-EJ-5530 
       34.88        27.91        39.29        25.97        13.05        41.82 
TCGA-EJ-5531 TCGA-EJ-5532 TCGA-EJ-7115 TCGA-EJ-7123 TCGA-EJ-7125 TCGA-EJ-7314 
       23.80        29.92        26.99        48.99        61.15         9.70 
TCGA-EJ-7317 TCGA-EJ-7327 TCGA-EJ-7328 TCGA-EJ-7330 TCGA-EJ-7331 TCGA-EJ-7781 
        9.37         5.75         5.59         6.28         0.30         5.56 
TCGA-EJ-7782 TCGA-EJ-7785 TCGA-EJ-7786 TCGA-EJ-7788 TCGA-EJ-7789 TCGA-EJ-7791 
        2.10         8.48         2.60         1.71         2.30         7.13 
TCGA-EJ-7792 TCGA-EJ-7793 TCGA-EJ-7794 TCGA-EJ-7797 TCGA-EJ-8470 TCGA-EJ-A46B 
       17.29         1.41         9.34         6.15        26.99         5.33 
TCGA-G9-6332 TCGA-G9-6333 TCGA-G9-6338 TCGA-G9-6343 TCGA-G9-6348 TCGA-G9-6351 
       65.92        63.29        54.21        18.21        37.61        39.95 
TCGA-G9-6353 TCGA-G9-6356 TCGA-G9-6361 TCGA-G9-6366 TCGA-G9-6367 TCGA-G9-6369 
       27.85        32.88        33.14         3.32        28.77        27.98 
TCGA-G9-6370 TCGA-G9-6378 TCGA-G9-6384 TCGA-G9-6385 TCGA-G9-6494 TCGA-G9-6496 
       26.50        21.83        12.82        11.70        47.41        33.34 
TCGA-G9-6499 TCGA-G9-7510 TCGA-G9-7519 TCGA-G9-7522 TCGA-G9-7523 TCGA-H9-7775 
       36.46        22.16        15.02        14.83        10.65         1.02 
TCGA-HC-7075 TCGA-HC-7077 TCGA-HC-7078 TCGA-HC-7079 TCGA-HC-7080 TCGA-HC-7211 
        2.01        65.98         5.33         2.93         2.01         0.99 
TCGA-HC-7212 TCGA-HC-7230 TCGA-HC-7736 TCGA-HC-7737 TCGA-HC-7740 TCGA-HC-7742 
        1.02         1.68         0.99         2.07         1.74         1.48 
TCGA-HC-7744 TCGA-HC-7747 TCGA-HC-7749 TCGA-HC-7750 TCGA-HC-7752 TCGA-HC-7818 
        1.68         1.87         2.01         1.12         3.22         1.48 
TCGA-HC-8265 TCGA-HC-A4ZV TCGA-HI-7168 TCGA-HI-7169 TCGA-HI-7170 TCGA-HI-7171 
        2.04         0.76        65.92        64.08        62.43        66.02 

  DEL PEAK 25(21Q22.3) MUTATED DEL PEAK 25(21Q22.3) WILD-TYPE 
                          0.92                           0.30 
  DEL PEAK 25(21Q22.3) MUTATED DEL PEAK 25(21Q22.3) WILD-TYPE 
                         66.12                          66.02 
  DEL PEAK 25(21Q22.3) MUTATED DEL PEAK 25(21Q22.3) WILD-TYPE 
                        19.710                         12.625 
[1] "0.9 - 66.1 (19.7)" "0.3 - 66.0 (12.6)"
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-CH-5769                     TCGA-CH-5771 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-G9-6364                     TCGA-G9-6365 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-CH-5769                     TCGA-CH-5771 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-G9-6364                     TCGA-G9-6365 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-CH-5737                     TCGA-CH-5738 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5739                     TCGA-CH-5740 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5741                     TCGA-CH-5743 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5744                     TCGA-CH-5746 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-CH-5748                     TCGA-CH-5750 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5751                     TCGA-CH-5752 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-CH-5753                     TCGA-CH-5754 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-CH-5761                     TCGA-CH-5762 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5763                     TCGA-CH-5764 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-CH-5765                     TCGA-CH-5766 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5767                     TCGA-CH-5768 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-CH-5769                     TCGA-CH-5771 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5772                     TCGA-CH-5788 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5789                     TCGA-CH-5790 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-CH-5791                     TCGA-CH-5792 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-CH-5794                     TCGA-EJ-5494 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5495                     TCGA-EJ-5496 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-5497                     TCGA-EJ-5498 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5499                     TCGA-EJ-5501 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5502                     TCGA-EJ-5503 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5504                     TCGA-EJ-5505 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5506                     TCGA-EJ-5507 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5508                     TCGA-EJ-5509 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5510                     TCGA-EJ-5511 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5512                     TCGA-EJ-5514 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5515                     TCGA-EJ-5516 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-5517                     TCGA-EJ-5518 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5519                     TCGA-EJ-5521 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-5522                     TCGA-EJ-5524 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-5525                     TCGA-EJ-5526 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-5527                     TCGA-EJ-5530 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5531                     TCGA-EJ-5532 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-5542                     TCGA-EJ-7115 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7123                     TCGA-EJ-7125 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7314                     TCGA-EJ-7315 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-7317                     TCGA-EJ-7321 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-7327                     TCGA-EJ-7328 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7330                     TCGA-EJ-7331 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7781                     TCGA-EJ-7782 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7783                     TCGA-EJ-7784 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-7785                     TCGA-EJ-7786 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7788                     TCGA-EJ-7789 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7791                     TCGA-EJ-7792 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7793                     TCGA-EJ-7794 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-EJ-7797                     TCGA-EJ-8469 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-8470                     TCGA-EJ-8472 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-EJ-A46B                     TCGA-FC-7708 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-G9-6329                     TCGA-G9-6332 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6333                     TCGA-G9-6336 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-G9-6338                     TCGA-G9-6342 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-G9-6343                     TCGA-G9-6348 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6351                     TCGA-G9-6353 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6356                     TCGA-G9-6361 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6362                     TCGA-G9-6363 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-G9-6364                     TCGA-G9-6365 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-G9-6366                     TCGA-G9-6367 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6369                     TCGA-G9-6370 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6371                     TCGA-G9-6373 
  "DEL PEAK 25(21Q22.3) MUTATED"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-G9-6377                     TCGA-G9-6378 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6384                     TCGA-G9-6385 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6494                     TCGA-G9-6496 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-6499                     TCGA-G9-7510 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-7519                     TCGA-G9-7521 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-G9-7522                     TCGA-G9-7523 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-G9-7525                     TCGA-H9-7775 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7075                     TCGA-HC-7077 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7078                     TCGA-HC-7079 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7080                     TCGA-HC-7209 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-HC-7211                     TCGA-HC-7212 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7213                     TCGA-HC-7230 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7231                     TCGA-HC-7736 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7737                     TCGA-HC-7740 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7742                     TCGA-HC-7744 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7747                     TCGA-HC-7748 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
                    TCGA-HC-7749                     TCGA-HC-7750 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7752                     TCGA-HC-7818 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-7821                     TCGA-HC-8265 
  "DEL PEAK 25(21Q22.3) MUTATED" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HC-A4ZV                     TCGA-HI-7168 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HI-7169                     TCGA-HI-7170 
"DEL PEAK 25(21Q22.3) WILD-TYPE" "DEL PEAK 25(21Q22.3) WILD-TYPE" 
                    TCGA-HI-7171                     TCGA-J4-8198 
"DEL PEAK 25(21Q22.3) WILD-TYPE"   "DEL PEAK 25(21Q22.3) MUTATED" 
[1] "hr="     "1.6e+09"
D46V2, continuous
                                vv
clus                             T2 T3 T4
  DEL PEAK 25(21Q22.3) MUTATED   15 33  3
  DEL PEAK 25(21Q22.3) WILD-TYPE 54 52  2
D46V3, multiclass
    clus
vv   DEL PEAK 25(21Q22.3) MUTATED DEL PEAK 25(21Q22.3) WILD-TYPE
  T2                           15                             54
  T3                           33                             52
  T4                            3                              2
D46V4, binary
                                cls
clus                              0  1
  DEL PEAK 25(21Q22.3) MUTATED   37  9
  DEL PEAK 25(21Q22.3) WILD-TYPE 89  6
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 25(21Q22.3) MUTATED     37    9
  DEL PEAK 25(21Q22.3) WILD-TYPE   89    6
   clus
vv  DEL PEAK 25(21Q22.3) MUTATED DEL PEAK 25(21Q22.3) WILD-TYPE
  0                           37                             89
  1                            9                              6
                                vv
clus                             R0 R1 RX
  DEL PEAK 25(21Q22.3) MUTATED   37 11  2
  DEL PEAK 25(21Q22.3) WILD-TYPE 82 20  1
D46V5, multiclass
    clus
vv   DEL PEAK 25(21Q22.3) MUTATED DEL PEAK 25(21Q22.3) WILD-TYPE
  R0                           37                             82
  R1                           11                             20
  RX                            2                              1
D46V6, continuous
> q(save="no")
