Pipeline Input Name	Archive Result File REF	Comment [TCGA Archive Name]	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	broad_values_by_arm.mutsig.cluster.txt	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	txt	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	table.1.txt	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	txt	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D35V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D58V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D11V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D16V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D58V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D34V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D9V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D58V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D70V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D13V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D4V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D64V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D50V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D11V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D15V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D13V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D2V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D55V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D21V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D20V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D57V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D14V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D37V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D35V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D26V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D23V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D36V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D60V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D16V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D59V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D34V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D62V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D35V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D19V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D23V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D55V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D55V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D16V2.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D57V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D14V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D15V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D34V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	D57V5.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
cnvarms2cluster:sample.gene.table.file	broad_values_by_arm.txt	gdac.broadinstitute.org_SKCM-TM.CopyNumber_Gistic2.Level_4.2013092300.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10432:3	Correlate_molecularSubtype_vs_CopyNumber_Arm_2013092300	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_SKCM-TM.Correlate_molecularSubtype_vs_CopyNumber_Arm.Level_4.2013092300.0.0	yes
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