
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_CorrelateExpressionVsMethylation/broadinstitute.org/cancer.genome.analysis/00332/101/ExprMeth.R")
> result <- gdacExprMeth("-m/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MethylationPreprocess/STAD-TP/4429167/STAD-TP.meth.by_min_expr_corr.data.txt", "-e/xchip/cga/gdac-prod/tcga-gdac/jobResults/mRNAseq_preprocessor/STAD-TP/4403200/STAD-TP.mRNAseq_RPKM_log2.txt", "-cspearman", "-bSTAD-TP", "-n/xchip/tcga/Tools/Nozzle/v1.current")
There were 50 or more warnings (use warnings() to see the first 50)
> q(save="no")
