
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/12/Correlate_Genomic_Events.R")
> result <- main("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/12/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-tTRUE", "-iD=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering_new/UCEC-TP/4474554/UCEC-TP.mergedcluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPicker/UCEC-TP/4435033/UCEC-TP.clin.merged.picked.txt", "-fF=", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=.05", "-cQ=0.25", "-MF=ALL", "-oT=UCEC-TP", "-nV=Nozzle.R1", "-OP=AGGREGRATED_CLUSTER", "-iT=", "-iX=")
[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=UCEC-TP"
[1] "opt"                     "-OP=AGGREGRATED_CLUSTER"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"                 "AGGREGRATED_CLUSTER"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPicker/UCEC-TP/4435033/UCEC-TP.clin.merged.picked.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering_new/UCEC-TP/4474554/UCEC-TP.mergedcluster.txt"

nPatients in clinical file=957, in cluster file=515, common to both=478
[1]  12 478
[1] "MRNA_CNMF"
[1] 3
 1  2  3  4 
14 18 12 10 
 1  2  3  4 
14 18 12 10 
[1] "MRNA_CHIERARCHICAL"
[1] 3
 1  2  3 
19 19 16 
 1  2  3 
19 19 16 
[1] "CN_CNMF"
[1] 3
  1   2   3   4   5   6 
280   8 138  12  20  12 
  1   2   3   4   5   6 
280   8 138  12  20  12 
[1] "METHLYATION_CNMF"
[1] 3
  1   2   3 
131  81 150 
  1   2   3 
131  81 150 
[1] "RPPA_CNMF"
[1] 3
 1  2  3  4  5  6 
42 39 40 12 41 26 
 1  2  3  4  5  6 
42 39 40 12 41 26 
[1] "RPPA_CHIERARCHICAL"
[1] 3
  1   2 
124  76 
  1   2 
124  76 
[1] "MRNASEQ_CNMF"
[1] 3
 1  2  3 
39 25 21 
 1  2  3 
39 25 21 
[1] "MRNASEQ_CHIERARCHICAL"
[1] 3
 1  2  3 
35 27 23 
 1  2  3 
35 27 23 
[1] "MIRSEQ_CNMF"
[1] 3
  1   2   3   4   5 
131 128  45  53 112 
  1   2   3   4   5 
131 128  45  53 112 
[1] "MIRSEQ_CHIERARCHICAL"
[1] 3
  1   2   3 
 24 220 225 
  1   2   3 
 24 220 225 
[1] "MIRSEQ_MATURE_CNMF"
[1] 3
  1   2   3 
148 112  82 
  1   2   3 
148 112  82 
[1] "MIRSEQ_MATURE_CHIERARCHICAL"
[1] 3
  1   2   3   4 
 89 132  96  25 
  1   2   3   4 
 89 132  96  25 
[1] "terrence_modification_tag"
[1] TRUE
[1] "data2feature, selection="
 [1] "YEARSTOBIRTH"                          
 [2] "VITALSTATUS"                           
 [3] "DAYSTODEATH"                           
 [4] "DAYSTOLASTFOLLOWUP"                    
 [5] "PRIMARYSITEOFDESEASE"                  
 [6] "NEOPLASM.DISEASESTAGE"                 
 [7] "PATHOLOGY.T.STAGE"                     
 [8] "PATHOLOGY.N.STAGE"                     
 [9] "PATHOLOGY.M.STAGE"                     
[10] "DCCUPLOADDATE"                         
[11] "GENDER"                                
[12] "DATEOFINITIALPATHOLOGICDIAGNOSIS"      
[13] "DAYSTOLASTKNOWNALIVE"                  
[14] "RADIATIONTHERAPY"                      
[15] "HISTOLOGICALTYPE"                      
[16] "RADIATIONS.RADIATION.REGIMENINDICATION"
[17] "COMPLETENESS.OF.RESECTION"             
[18] "BATCHNUMBER"                           

Input Data has 18 rows and 478 columns.

[1] "Batch" "18"   
[1] "Last Follow UP"
TCGA-A5-A0G1 TCGA-A5-A0G2 TCGA-A5-A0G3 TCGA-A5-A0G5 TCGA-A5-A0G9 TCGA-A5-A0GA 
          NA         4548         1428         1126         2540           NA 
TCGA-A5-A0GB TCGA-A5-A0GD TCGA-A5-A0GE TCGA-A5-A0GG TCGA-A5-A0GH TCGA-A5-A0GI 
         997           97         3205         2656         2253         1750 
TCGA-A5-A0GJ TCGA-A5-A0GM TCGA-A5-A0GN TCGA-A5-A0GP TCGA-A5-A0GQ TCGA-A5-A0GR 
        2000         1840         1841         1416         1167         1120 
TCGA-A5-A0GU TCGA-A5-A0GV TCGA-A5-A0GW TCGA-A5-A0GX TCGA-A5-A0R6 TCGA-A5-A0R7 
         859          633          706         2087          607          534 
TCGA-A5-A0R8 TCGA-A5-A0R9 TCGA-A5-A0RA TCGA-A5-A0VO TCGA-A5-A0VP TCGA-A5-A0VQ 
         595          749          883          364         1287          485 
TCGA-A5-A1OF TCGA-A5-A1OG TCGA-A5-A1OH TCGA-A5-A1OJ TCGA-A5-A1OK TCGA-A5-A2K2 
         241          348         1104          292          243         2768 
TCGA-A5-A2K3 TCGA-A5-A2K4 TCGA-A5-A2K5 TCGA-A5-A2K7 TCGA-A5-A3LO TCGA-A5-A3LP 
        1409           NA          161          156          223          455 
TCGA-AJ-A23M TCGA-AJ-A23N TCGA-AJ-A23O TCGA-AJ-A2QK TCGA-AJ-A2QL TCGA-AJ-A2QM 
          31           33           60           12          602           31 
TCGA-AJ-A2QN TCGA-AJ-A2QO TCGA-AJ-A3BD TCGA-AJ-A3BF TCGA-AJ-A3BG TCGA-AJ-A3BH 
          61           91           15           34           31           NA 
TCGA-AJ-A3BI TCGA-AJ-A3BK TCGA-AJ-A3EJ TCGA-AJ-A3EK TCGA-AJ-A3EL TCGA-AJ-A3EM 
          61           51           NA           64           65           50 
TCGA-AJ-A3I9 TCGA-AJ-A3IA TCGA-AJ-A3NC TCGA-AJ-A3NE TCGA-AJ-A3NF TCGA-AJ-A3NG 
          39           28          210           78           41           52 
TCGA-AJ-A3NH TCGA-AJ-A3OJ TCGA-AJ-A3OK TCGA-AJ-A3OL TCGA-AJ-A3QS TCGA-AJ-A3TW 
          23           59          142           57           56           51 
TCGA-AP-A051 TCGA-AP-A052 TCGA-AP-A053 TCGA-AP-A054 TCGA-AP-A056 TCGA-AP-A059 
        2545           NA          181           NA         2618          250 
TCGA-AP-A05A TCGA-AP-A05D TCGA-AP-A05H TCGA-AP-A05J TCGA-AP-A05N TCGA-AP-A05O 
        1198         1758         1385         1122          239          371 
TCGA-AP-A05P TCGA-AP-A0L8 TCGA-AP-A0L9 TCGA-AP-A0LD TCGA-AP-A0LE TCGA-AP-A0LF 
         636           NA         3814         3589         3357          103 
TCGA-AP-A0LG TCGA-AP-A0LH TCGA-AP-A0LI TCGA-AP-A0LJ TCGA-AP-A0LL TCGA-AP-A0LM 
        1921           NA         2972          965         2554          825 
TCGA-AP-A0LN TCGA-AP-A0LO TCGA-AP-A0LP TCGA-AP-A0LQ TCGA-AP-A0LS TCGA-AP-A0LT 
        2510           NA         1875         2457         1918         1497 
TCGA-AP-A0LV TCGA-AP-A1DH TCGA-AP-A1DK TCGA-AP-A1DM TCGA-AP-A1DO TCGA-AP-A1DP 
         763         2180         1836         1700          952           NA 
TCGA-AP-A1DQ TCGA-AP-A1DR TCGA-AP-A1DV TCGA-AP-A1E0 TCGA-AP-A1E1 TCGA-AP-A1E3 
        1275         1495          204          940          317          847 
TCGA-AP-A1E4 TCGA-AP-A3K1 TCGA-AW-A1PO TCGA-AX-A05S TCGA-AX-A05T TCGA-AX-A05U 
         494          555           17           NA          603          902 
TCGA-AX-A05W TCGA-AX-A05Y TCGA-AX-A05Z TCGA-AX-A060 TCGA-AX-A062 TCGA-AX-A063 
        2078         2191         1413         1075         1398         2024 
TCGA-AX-A064 TCGA-AX-A06B TCGA-AX-A06D TCGA-AX-A06F TCGA-AX-A06H TCGA-AX-A06J 
        1064         1639           NA         1554          833          913 
TCGA-AX-A06L TCGA-AX-A0IS TCGA-AX-A0IU TCGA-AX-A0IW TCGA-AX-A0IZ TCGA-AX-A0J0 
        1844         1065          868         1148         1333         1219 
TCGA-AX-A0J1 TCGA-AX-A1C4 TCGA-AX-A1C5 TCGA-AX-A1C7 TCGA-AX-A1C8 TCGA-AX-A1C9 
        2004          404          584          515          412          464 
TCGA-AX-A1CA TCGA-AX-A1CC TCGA-AX-A1CE TCGA-AX-A1CF TCGA-AX-A1CI TCGA-AX-A1CJ 
         617          378          610         2337         2207         1645 
TCGA-AX-A1CK TCGA-AX-A1CN TCGA-AX-A1CP TCGA-AX-A1CR TCGA-AX-A2H2 TCGA-AX-A2H4 
        2052          764         1107          337           NA           NA 
TCGA-AX-A2H5 TCGA-AX-A2H7 TCGA-AX-A2H8 TCGA-AX-A2HA TCGA-AX-A2HC TCGA-AX-A2HD 
        2167         1020         1861         2090         1016         1232 
TCGA-AX-A2HF TCGA-AX-A2HG TCGA-AX-A2HH TCGA-AX-A2HJ TCGA-AX-A2HK TCGA-AX-A2IN 
         489          660          539          831           NA           NA 
TCGA-AX-A2IO TCGA-AX-A3FS TCGA-AX-A3FT TCGA-AX-A3FW TCGA-AX-A3FX TCGA-AX-A3FZ 
        1176            7            3           10            4            6 
TCGA-AX-A3G1 TCGA-AX-A3G3 TCGA-AX-A3G4 TCGA-AX-A3G6 TCGA-AX-A3G7 TCGA-AX-A3G8 
          NA            1            4           NA            7           36 
TCGA-AX-A3G9 TCGA-AX-A3GB TCGA-AX-A3GI TCGA-B5-A0JN TCGA-B5-A0JR TCGA-B5-A0JS 
         254          440            4         2445         1731         1422 
TCGA-B5-A0JT TCGA-B5-A0JU TCGA-B5-A0JV TCGA-B5-A0JX TCGA-B5-A0JY TCGA-B5-A0JZ 
        1312         1483         1237         1360         1003          871 
TCGA-B5-A0K0 TCGA-B5-A0K1 TCGA-B5-A0K2 TCGA-B5-A0K3 TCGA-B5-A0K4 TCGA-B5-A0K6 
         862          928          788          700          544          426 
TCGA-B5-A0K7 TCGA-B5-A0K8 TCGA-B5-A0K9 TCGA-B5-A0KB TCGA-B5-A11E TCGA-B5-A11F 
         519          542          335          124          265         5650 
TCGA-B5-A11G TCGA-B5-A11H TCGA-B5-A11I TCGA-B5-A11J TCGA-B5-A11L TCGA-B5-A11M 
        3447         2687         2303         1656         1396         1361 
TCGA-B5-A11N TCGA-B5-A11O TCGA-B5-A11P TCGA-B5-A11Q TCGA-B5-A11R TCGA-B5-A11S 
        1337         1245         1120          975         1019          831 
TCGA-B5-A11U TCGA-B5-A11V TCGA-B5-A11W TCGA-B5-A11X TCGA-B5-A11Y TCGA-B5-A11Z 
         509          594          592          595          559          528 
TCGA-B5-A121 TCGA-B5-A1MR TCGA-B5-A1MS TCGA-B5-A1MU TCGA-B5-A1MV TCGA-B5-A1MW 
         504         5835           NA           NA          438          447 
TCGA-B5-A1MX TCGA-B5-A1MY TCGA-B5-A1MZ TCGA-B5-A1N2 TCGA-B5-A3FC TCGA-B5-A3S1 
         355           NA          465          389         1890          152 
TCGA-BG-A0LW TCGA-BG-A0LX TCGA-BG-A0M0 TCGA-BG-A0M2 TCGA-BG-A0M3 TCGA-BG-A0M4 
         565          613          587          636         1071         1064 
TCGA-BG-A0M6 TCGA-BG-A0M7 TCGA-BG-A0M8 TCGA-BG-A0M9 TCGA-BG-A0MA TCGA-BG-A0MC 
         241         1167         1110          860           NA         1263 
TCGA-BG-A0MG TCGA-BG-A0MH TCGA-BG-A0MI TCGA-BG-A0MK TCGA-BG-A0MO TCGA-BG-A0MQ 
        1477         1341           NA           NA         1308         1196 
TCGA-BG-A0MS TCGA-BG-A0MT TCGA-BG-A0MU TCGA-BG-A0RY TCGA-BG-A0VT TCGA-BG-A0VV 
         937          644          616          469          224          260 
TCGA-BG-A0VW TCGA-BG-A0VX TCGA-BG-A0VZ TCGA-BG-A0W1 TCGA-BG-A0W2 TCGA-BG-A0YU 
         131          490          868          907         1151          451 
TCGA-BG-A0YV TCGA-BG-A186 TCGA-BG-A187 TCGA-BG-A18A TCGA-BG-A18B TCGA-BG-A18C 
         382          419          448          426          470          470 
TCGA-BG-A220 TCGA-BG-A221 TCGA-BG-A222 TCGA-BG-A2AD TCGA-BG-A2AE TCGA-BG-A2L7 
         434           55          291           NA           16          177 
TCGA-BG-A3EW TCGA-BG-A3PP TCGA-BK-A0C9 TCGA-BK-A0CA TCGA-BK-A0CB TCGA-BK-A0CC 
         344          207          386         1064          188          311 
TCGA-BK-A139 TCGA-BK-A13B TCGA-BK-A13C TCGA-BK-A26L TCGA-BK-A4ZD TCGA-BK-A56F 
         309          966          760          734          211          200 
TCGA-BS-A0T9 TCGA-BS-A0TA TCGA-BS-A0TC TCGA-BS-A0TD TCGA-BS-A0TE TCGA-BS-A0TG 
          NA          714         2602         2378           NA         2370 
TCGA-BS-A0TI TCGA-BS-A0TJ TCGA-BS-A0U5 TCGA-BS-A0U7 TCGA-BS-A0U8 TCGA-BS-A0U9 
        1882         2068         2935           NA         2963         2044 
TCGA-BS-A0UA TCGA-BS-A0UF TCGA-BS-A0UJ TCGA-BS-A0UL TCGA-BS-A0UM TCGA-BS-A0UT 
        2686         2611         2506         2481         2643         2212 
TCGA-BS-A0UV TCGA-BS-A0V4 TCGA-BS-A0V6 TCGA-BS-A0V7 TCGA-BS-A0V8 TCGA-BS-A0VI 
        2228         1810         1910         1934         1507         1921 
TCGA-BS-A0WQ TCGA-D1-A0ZN TCGA-D1-A0ZO TCGA-D1-A0ZP TCGA-D1-A0ZQ TCGA-D1-A0ZR 
        2021          512          602          911          260           17 
TCGA-D1-A0ZS TCGA-D1-A0ZU TCGA-D1-A0ZV TCGA-D1-A0ZZ TCGA-D1-A101 TCGA-D1-A102 
         147          872          728          685           53          135 
TCGA-D1-A103 TCGA-D1-A15V TCGA-D1-A15W TCGA-D1-A15X TCGA-D1-A15Z TCGA-D1-A160 
         669         1201          915          909           NA          112 
TCGA-D1-A161 TCGA-D1-A162 TCGA-D1-A163 TCGA-D1-A165 TCGA-D1-A167 TCGA-D1-A168 
         892         1145          991           20          478         1098 
TCGA-D1-A169 TCGA-D1-A16B TCGA-D1-A16D TCGA-D1-A16E TCGA-D1-A16F TCGA-D1-A16G 
        1135         1106         1141         1119           80           NA 
TCGA-D1-A16I TCGA-D1-A16J TCGA-D1-A16N TCGA-D1-A16O TCGA-D1-A16Q TCGA-D1-A16R 
          NA          909          945         1022          324           21 
TCGA-D1-A16S TCGA-D1-A16V TCGA-D1-A16X TCGA-D1-A16Y TCGA-D1-A174 TCGA-D1-A175 
         568           43          111          532          594          202 
TCGA-D1-A176 TCGA-D1-A177 TCGA-D1-A179 TCGA-D1-A17A TCGA-D1-A17B TCGA-D1-A17C 
         917          548          206           48          212           30 
TCGA-D1-A17D TCGA-D1-A17F TCGA-D1-A17H TCGA-D1-A17K TCGA-D1-A17L TCGA-D1-A17M 
         926           39          852          854          802          311 
TCGA-D1-A17N TCGA-D1-A17Q TCGA-D1-A17R TCGA-D1-A17S TCGA-D1-A17T TCGA-D1-A17U 
          46           54           NA          739           70          697 
TCGA-D1-A1NS TCGA-D1-A1NU TCGA-D1-A1NW TCGA-D1-A1NX TCGA-D1-A1NY TCGA-D1-A1NZ 
          43          402           22          555          513          548 
TCGA-D1-A1O0 TCGA-D1-A1O5 TCGA-D1-A1O7 TCGA-D1-A1O8 TCGA-D1-A2G0 TCGA-D1-A2G5 
          63          458           32           NA          107         1260 
TCGA-D1-A2G6 TCGA-D1-A2G7 TCGA-D1-A3DA TCGA-D1-A3DG TCGA-D1-A3DH TCGA-DI-A0WH 
          NA         1365            8          130          125          495 
TCGA-DI-A1BU TCGA-DI-A1BY TCGA-DI-A1C3 TCGA-DI-A1NN TCGA-DI-A1NO TCGA-DI-A2QT 
        1195         1114          739         1076           NA           NA 
TCGA-DI-A2QU TCGA-DI-A2QY TCGA-E6-A1LX TCGA-E6-A1LZ TCGA-E6-A1M0 TCGA-E6-A2P8 
          NA         2797          711         1471          518           NA 
TCGA-E6-A2P9 TCGA-EC-A1NJ TCGA-EC-A1QX TCGA-EC-A24G TCGA-EO-A1Y5 TCGA-EO-A1Y7 
         202          487          223          510          332          243 
TCGA-EO-A1Y8 TCGA-EO-A22R TCGA-EO-A22S TCGA-EO-A22T TCGA-EO-A22U TCGA-EO-A22X 
         328          972         1066         1004          825          981 
TCGA-EO-A22Y TCGA-EO-A2CG TCGA-EO-A2CH TCGA-EO-A3AS TCGA-EO-A3AU TCGA-EO-A3AY 
         761          974           NA         1046          589          392 
TCGA-EY-A1G7 TCGA-EY-A1G8 TCGA-EY-A1GC TCGA-EY-A1GD TCGA-EY-A1GE TCGA-EY-A1GF 
          NA           NA          138          248          741          826 
TCGA-EY-A1GH TCGA-EY-A1GI TCGA-EY-A1GJ TCGA-EY-A1GK TCGA-EY-A1GL TCGA-EY-A1GM 
         709          709          727          693          424          209 
TCGA-EY-A1GO TCGA-EY-A1GP TCGA-EY-A1GQ TCGA-EY-A1GR TCGA-EY-A1GS TCGA-EY-A1GT 
         586          573          544          536          459          490 
TCGA-EY-A1GU TCGA-EY-A1GV TCGA-EY-A1GW TCGA-EY-A1GX TCGA-EY-A1H0 TCGA-EY-A210 
         378          481          260          197          588          383 
TCGA-EY-A212 TCGA-EY-A214 TCGA-EY-A215 TCGA-EY-A2OM TCGA-EY-A2ON TCGA-EY-A2OO 
         109          438          574          694          409         1392 
TCGA-EY-A2OP TCGA-EY-A2OQ TCGA-EY-A3L3 TCGA-EY-A3QX TCGA-EY-A4KR TCGA-EY-A547 
         943          884          258          421          196          544 
TCGA-EY-A548 TCGA-EY-A549 TCGA-EY-A54A TCGA-FI-A2CX TCGA-FI-A2CY TCGA-FI-A2D0 
          65          212          113         1217         1064         1034 
TCGA-FI-A2D2 TCGA-FI-A2D4 TCGA-FI-A2D5 TCGA-FI-A2D6 TCGA-FI-A2EU TCGA-FI-A2EW 
        1095           NA           NA          273         2953         1795 
TCGA-FI-A2EX TCGA-FI-A2EY TCGA-FI-A2F4 TCGA-FI-A2F8 TCGA-FI-A2F9 TCGA-FI-A3PV 
         276           NA          880          761          791           NA 
TCGA-H5-A2HR TCGA-K6-A3WQ TCGA-KJ-A3U4 TCGA-PG-A5BC 
          53          203           73          329 
Variable 1:'AGE':	nDistinctValues=59,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 2:'VITALSTATUS':	nDistinctValues=2,	numeric=TRUE,	binary=TRUE,	exclude=FALSE.
Variable 3:'DAYSTODEATH':	nDistinctValues=54,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 4:'DAYSTOLASTFOLLOWUP':	nDistinctValues=387,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 5:'PRIMARY.SITE.OF.DISEASE':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 6:'NEOPLASM.DISEASESTAGE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 7:'PATHOLOGY.T.STAGE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 8:'PATHOLOGY.N.STAGE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 9:'PATHOLOGY.M.STAGE':	nDistinctValues=0,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 10:'DCCUPLOADDAY':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 11:'GENDER':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 12:'DAYOFINITIALPATHOLOGICDIAGNOSIS':	nDistinctValues=17,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 13:'DAYSTOLASTKNOWNALIVE':	nDistinctValues=17,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 14:'RADIATION.THERAPY':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 15:'HISTOLOGICAL.TYPE':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 16:'RADIATIONS.RADIATION.REGIMENINDICATION':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 17:'COMPLETENESS.OF.RESECTION':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 18:'BATCH.NUMBER':	nDistinctValues=26,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
[1] "rownames(nsurv.mat)"
[1] "AGE"                                   
[2] "HISTOLOGICAL.TYPE"                     
[3] "RADIATIONS.RADIATION.REGIMENINDICATION"
[4] "COMPLETENESS.OF.RESECTION"             
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 478 columns, 1 survival variables, and 4 non-survival variables.
AGE, nv=59, binary=FALSE, numeric=TRUE
HISTOLOGICAL.TYPE, nv=3, binary=FALSE, numeric=FALSE
RADIATIONS.RADIATION.REGIMENINDICATION, nv=2, binary=FALSE, numeric=FALSE
COMPLETENESS.OF.RESECTION, nv=4, binary=FALSE, numeric=FALSE

Clustering(1) Variable = MRNA_CNMF
D1V1, survival
          sevent
clus2       0  1
  subtype1 12  2
  subtype2 14  4
  subtype3 11  1
  subtype4  8  2
subtype1 subtype2 subtype3 subtype4 
      14       18       12       10 
subtype1 subtype2 subtype3 subtype4 
       2        4        1        2 
$subtype1
TCGA-A5-A0G2 TCGA-A5-A0G5 TCGA-A5-A0GA TCGA-A5-A0GB TCGA-AP-A051 TCGA-AP-A0LT 
      149.52        37.02        17.85        32.78        83.67        49.22 
TCGA-AX-A05S TCGA-AX-A05Z TCGA-AX-A060 TCGA-AX-A063 TCGA-AX-A064 TCGA-AX-A06F 
       13.58        46.45        35.34        66.54        34.98        51.09 
TCGA-B5-A0JR TCGA-B5-A0JZ 
       56.91        28.64 

$subtype2
TCGA-A5-A0G3 TCGA-A5-A0GH TCGA-AP-A052 TCGA-AP-A053 TCGA-AP-A054 TCGA-AP-A056 
       46.95        74.07        21.99         5.95        23.31        86.07 
TCGA-AP-A05A TCGA-AP-A05D TCGA-AP-A05H TCGA-AP-A05J TCGA-AP-A0L8 TCGA-AP-A0L9 
       39.39        57.80        45.53        36.89        48.79       125.39 
TCGA-AP-A0LD TCGA-AX-A06B TCGA-AX-A0IW TCGA-AX-A0J1 TCGA-B5-A0K4 TCGA-BK-A0CC 
      117.99        53.88        37.74        65.88        17.88        10.22 

$subtype3
TCGA-A5-A0GE TCGA-A5-A0GP TCGA-AP-A05P TCGA-AP-A0LH TCGA-AP-A0LJ TCGA-AX-A05T 
      105.37        46.55        20.91        36.36        31.73        19.82 
TCGA-AX-A05U TCGA-AX-A05W TCGA-AX-A05Y TCGA-AX-A06J TCGA-B5-A0K1 TCGA-BK-A0C9 
       29.65        68.32        72.03        30.02        30.51        12.69 

$subtype4
TCGA-A5-A0GM TCGA-A5-A0GU TCGA-AP-A05N TCGA-AP-A0LG TCGA-AP-A0LN TCGA-AP-A0LV 
       60.49        28.24         7.86        63.16        82.52        25.08 
TCGA-AX-A062 TCGA-B5-A0K0 TCGA-BG-A0LW TCGA-BG-A0MI 
       45.96        28.34        18.58        23.47 

subtype1 subtype2 subtype3 subtype4 
   13.58     5.95    12.69     7.86 
subtype1 subtype2 subtype3 subtype4 
  149.52   125.39   105.37    82.52 
subtype1 subtype2 subtype3 subtype4 
  41.735   46.240   31.120   28.290 
[1] "13.6 - 149.5 (41.7)" "6.0 - 125.4 (46.2)"  "12.7 - 105.4 (31.1)"
[4] "7.9 - 82.5 (28.3)"  
 [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
 [7] "subtype2" "subtype4" "subtype3" "subtype4" "subtype1" "subtype2"
[13] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[19] "subtype2" "subtype4" "subtype3" "subtype2" "subtype2" "subtype2"
[25] "subtype4" "subtype3" "subtype3" "subtype4" "subtype1" "subtype4"
[31] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[37] "subtype1" "subtype4" "subtype1" "subtype1" "subtype2" "subtype1"
[43] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype4"
[49] "subtype3" "subtype2" "subtype4" "subtype4" "subtype3" "subtype2"
 [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
 [7] "subtype2" "subtype4" "subtype3" "subtype4" "subtype1" "subtype2"
[13] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[19] "subtype2" "subtype4" "subtype3" "subtype2" "subtype2" "subtype2"
[25] "subtype4" "subtype3" "subtype3" "subtype4" "subtype1" "subtype4"
[31] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[37] "subtype1" "subtype4" "subtype1" "subtype1" "subtype2" "subtype1"
[43] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype4"
[49] "subtype3" "subtype2" "subtype4" "subtype4" "subtype3" "subtype2"
 [1] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
 [7] "subtype2" "subtype4" "subtype3" "subtype4" "subtype1" "subtype2"
[13] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[19] "subtype2" "subtype4" "subtype3" "subtype2" "subtype2" "subtype2"
[25] "subtype4" "subtype3" "subtype3" "subtype4" "subtype1" "subtype4"
[31] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[37] "subtype1" "subtype4" "subtype1" "subtype1" "subtype2" "subtype1"
[43] "subtype3" "subtype2" "subtype2" "subtype1" "subtype1" "subtype4"
[49] "subtype3" "subtype2" "subtype4" "subtype4" "subtype3" "subtype2"
D1V2, continuous
          vv
clus       ENDOMETRIOID ENDOMETRIAL ADENOCARCINOMA
  subtype1                                      12
  subtype2                                       8
  subtype3                                      11
  subtype4                                      10
          vv
clus       MIXED SEROUS AND ENDOMETRIOID SEROUS ENDOMETRIAL ADENOCARCINOMA
  subtype1                             0                                 2
  subtype2                             0                                10
  subtype3                             1                                 0
  subtype4                             0                                 0
D1V3, multiclass
D1V4, binary
          cls
clus        0  1
  subtype1  8  6
  subtype2 12  6
  subtype3  3  9
  subtype4  2  8
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    8    6
  subtype2   12    6
  subtype3    3    9
  subtype4    2    8
     clus
vv    subtype1 subtype2 subtype3 subtype4
  NO         8       12        3        2
  YES        6        6        9        8
          vv
clus       R0 R1 R2 RX
  subtype1  8  2  1  0
  subtype2 14  1  1  1
  subtype3  9  2  0  0
  subtype4  8  1  0  0
D1V5, multiclass

Clustering(2) Variable = MRNA_CHIERARCHICAL
D2V1, survival
          sevent
clus2       0  1
  subtype1 16  3
  subtype2 17  2
  subtype3 12  4
subtype1 subtype2 subtype3 
      19       19       16 
subtype1 subtype2 subtype3 
       3        2        4 
$subtype1
TCGA-A5-A0G2 TCGA-A5-A0G5 TCGA-A5-A0GA TCGA-A5-A0GB TCGA-A5-A0GP TCGA-AP-A051 
      149.52        37.02        17.85        32.78        46.55        83.67 
TCGA-AP-A056 TCGA-AP-A0LG TCGA-AP-A0LH TCGA-AP-A0LT TCGA-AX-A05S TCGA-AX-A05W 
       86.07        63.16        36.36        49.22        13.58        68.32 
TCGA-AX-A05Z TCGA-AX-A060 TCGA-AX-A063 TCGA-AX-A064 TCGA-AX-A06F TCGA-B5-A0JR 
       46.45        35.34        66.54        34.98        51.09        56.91 
TCGA-B5-A0JZ 
       28.64 

$subtype2
TCGA-A5-A0GE TCGA-A5-A0GM TCGA-A5-A0GU TCGA-AP-A05N TCGA-AP-A05P TCGA-AP-A0LJ 
      105.37        60.49        28.24         7.86        20.91        31.73 
TCGA-AP-A0LN TCGA-AP-A0LV TCGA-AX-A05T TCGA-AX-A05U TCGA-AX-A05Y TCGA-AX-A062 
       82.52        25.08        19.82        29.65        72.03        45.96 
TCGA-AX-A06J TCGA-B5-A0K0 TCGA-B5-A0K1 TCGA-B5-A0K4 TCGA-BG-A0LW TCGA-BG-A0MI 
       30.02        28.34        30.51        17.88        18.58        23.47 
TCGA-BK-A0C9 
       12.69 

$subtype3
TCGA-A5-A0G3 TCGA-A5-A0GH TCGA-AP-A052 TCGA-AP-A053 TCGA-AP-A054 TCGA-AP-A05A 
       46.95        74.07        21.99         5.95        23.31        39.39 
TCGA-AP-A05D TCGA-AP-A05H TCGA-AP-A05J TCGA-AP-A0L8 TCGA-AP-A0L9 TCGA-AP-A0LD 
       57.80        45.53        36.89        48.79       125.39       117.99 
TCGA-AX-A06B TCGA-AX-A0IW TCGA-AX-A0J1 TCGA-BK-A0CC 
       53.88        37.74        65.88        10.22 

subtype1 subtype2 subtype3 
   13.58     7.86     5.95 
subtype1 subtype2 subtype3 
  149.52   105.37   125.39 
subtype1 subtype2 subtype3 
   46.55    28.34    46.24 
[1] "13.6 - 149.5 (46.5)" "7.9 - 105.4 (28.3)"  "6.0 - 125.4 (46.2)" 
 [1] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
 [7] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[13] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[19] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[25] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[31] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[37] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[43] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[49] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
 [1] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
 [7] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[13] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[19] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[25] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[31] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[37] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[43] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[49] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
 [1] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
 [7] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[13] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[19] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[25] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[31] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[37] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype1"
[43] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype2"
[49] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
D2V2, continuous
          vv
clus       ENDOMETRIOID ENDOMETRIAL ADENOCARCINOMA
  subtype1                                      16
  subtype2                                      19
  subtype3                                       6
          vv
clus       MIXED SEROUS AND ENDOMETRIOID SEROUS ENDOMETRIAL ADENOCARCINOMA
  subtype1                             1                                 2
  subtype2                             0                                 0
  subtype3                             0                                10
D2V3, multiclass
D2V4, binary
          cls
clus        0  1
  subtype1 11  8
  subtype2  4 15
  subtype3 10  6
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   11    8
  subtype2    4   15
  subtype3   10    6
     clus
vv    subtype1 subtype2 subtype3
  NO        11        4       10
  YES        8       15        6
          vv
clus       R0 R1 R2 RX
  subtype1 13  2  1  0
  subtype2 13  3  0  0
  subtype3 13  1  1  1
D2V5, multiclass

Clustering(3) Variable = CN_CNMF
D3V1, survival
          sevent
clus2        0   1
  subtype1 256  22
  subtype2   5   3
  subtype3 111  26
  subtype4  11   1
  subtype5  18   2
  subtype6  10   2
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
     278        8      137       12       20       12 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
      22        3       26        1        2        2 
$subtype1
TCGA-A5-A0G1 TCGA-A5-A0G9 TCGA-A5-A0GA TCGA-A5-A0GB TCGA-A5-A0GD TCGA-A5-A0GE 
      106.88        83.51        17.85        32.78         3.19       105.37 
TCGA-A5-A0GG TCGA-A5-A0GH TCGA-A5-A0GI TCGA-A5-A0GM TCGA-A5-A0GP TCGA-A5-A0GQ 
       87.32        74.07        57.53        60.49        46.55        38.37 
TCGA-A5-A0GU TCGA-A5-A0GW TCGA-A5-A0GX TCGA-A5-A0R8 TCGA-A5-A0R9 TCGA-A5-A0RA 
       28.24        23.21        68.61        19.56        24.62        29.03 
TCGA-A5-A0VP TCGA-A5-A0VQ TCGA-A5-A1OF TCGA-A5-A1OJ TCGA-A5-A1OK TCGA-A5-A2K5 
       42.31        15.95         7.92         9.60         7.99         5.29 
TCGA-A5-A2K7 TCGA-AJ-A23O TCGA-AJ-A2QL TCGA-AJ-A2QO TCGA-AJ-A3BG TCGA-AJ-A3BK 
        5.13         1.97        19.79         2.99         1.02         1.68 
TCGA-AJ-A3EK TCGA-AJ-A3EL TCGA-AJ-A3NC TCGA-AJ-A3NE TCGA-AJ-A3NG TCGA-AJ-A3OJ 
        2.10         2.14         6.90         2.56         1.71         1.94 
TCGA-AJ-A3OK TCGA-AJ-A3OL TCGA-AP-A051 TCGA-AP-A054 TCGA-AP-A056 TCGA-AP-A059 
        4.67         1.87        83.67        23.31        86.07         8.22 
TCGA-AP-A05N TCGA-AP-A05O TCGA-AP-A05P TCGA-AP-A0LD TCGA-AP-A0LE TCGA-AP-A0LG 
        7.86        12.20        20.91       117.99       110.37        63.16 
TCGA-AP-A0LH TCGA-AP-A0LJ TCGA-AP-A0LL TCGA-AP-A0LM TCGA-AP-A0LN TCGA-AP-A0LP 
       36.36        31.73        83.97        27.12        82.52        61.64 
TCGA-AP-A0LQ TCGA-AP-A0LS TCGA-AP-A0LT TCGA-AP-A0LV TCGA-AP-A1DH TCGA-AP-A1DK 
       80.78        63.06        49.22        25.08        71.67        60.36 
TCGA-AP-A1DM TCGA-AP-A1DP TCGA-AP-A1DR TCGA-AP-A1DV TCGA-AP-A1E0 TCGA-AP-A1E1 
       55.89        35.54        49.15         6.71        30.90        10.42 
TCGA-AP-A1E3 TCGA-AP-A1E4 TCGA-AX-A05S TCGA-AX-A05T TCGA-AX-A05U TCGA-AX-A05Y 
       27.85        16.24        13.58        19.82        29.65        72.03 
TCGA-AX-A05Z TCGA-AX-A060 TCGA-AX-A062 TCGA-AX-A063 TCGA-AX-A064 TCGA-AX-A06D 
       46.45        35.34        45.96        66.54        34.98        12.26 
TCGA-AX-A06F TCGA-AX-A06H TCGA-AX-A06J TCGA-AX-A06L TCGA-AX-A0IS TCGA-AX-A0IZ 
       51.09        27.39        30.02        60.62        35.01        43.82 
TCGA-AX-A0J0 TCGA-AX-A0J1 TCGA-AX-A1C4 TCGA-AX-A1C5 TCGA-AX-A1C9 TCGA-AX-A1CC 
       40.08        65.88        13.28        19.20        15.25        12.43 
TCGA-AX-A1CE TCGA-AX-A1CI TCGA-AX-A1CJ TCGA-AX-A1CK TCGA-AX-A1CN TCGA-AX-A2HA 
       20.05        72.56        54.08        67.46        25.12        68.71 
TCGA-AX-A2HC TCGA-AX-A2HD TCGA-AX-A2HG TCGA-AX-A2HJ TCGA-AX-A2IN TCGA-AX-A3FS 
       33.40        40.50        21.70        27.32        31.10         0.23 
TCGA-AX-A3FT TCGA-AX-A3G8 TCGA-AX-A3G9 TCGA-AX-A3GB TCGA-B5-A0JR TCGA-B5-A0JS 
        0.10         1.18         8.35        14.47        56.91        46.75 
TCGA-B5-A0JU TCGA-B5-A0JV TCGA-B5-A0JX TCGA-B5-A0JY TCGA-B5-A0JZ TCGA-B5-A0K0 
       48.76        40.67        44.71        32.98        28.64        28.34 
TCGA-B5-A0K1 TCGA-B5-A0K2 TCGA-B5-A0K4 TCGA-B5-A0K6 TCGA-B5-A0K7 TCGA-B5-A0K9 
       30.51        25.91        17.88        14.01        17.06        11.01 
TCGA-B5-A11F TCGA-B5-A11G TCGA-B5-A11H TCGA-B5-A11J TCGA-B5-A11L TCGA-B5-A11N 
      185.75       113.33        88.34        54.44        45.90        43.96 
TCGA-B5-A11O TCGA-B5-A11Q TCGA-B5-A11U TCGA-B5-A11W TCGA-B5-A11Y TCGA-B5-A11Z 
       40.93        32.05        16.73        19.46        18.38        17.36 
TCGA-B5-A121 TCGA-B5-A1MR TCGA-B5-A1MV TCGA-B5-A1MW TCGA-B5-A1MX TCGA-B5-A1MZ 
       16.57       191.84        14.40        14.70        11.67        15.29 
TCGA-B5-A3FC TCGA-BG-A0LW TCGA-BG-A0LX TCGA-BG-A0M0 TCGA-BG-A0M3 TCGA-BG-A0M7 
       62.14        18.58        20.15        19.30        35.21        38.37 
TCGA-BG-A0M9 TCGA-BG-A0MA TCGA-BG-A0MC TCGA-BG-A0MG TCGA-BG-A0MI TCGA-BG-A0MK 
       28.27        10.72        41.52        48.56        23.47        43.30 
TCGA-BG-A0MO TCGA-BG-A0MQ TCGA-BG-A0MU TCGA-BG-A0VV TCGA-BG-A0VW TCGA-BG-A0VX 
       43.00        39.32        20.25         8.55         4.31        16.11 
TCGA-BG-A0VZ TCGA-BG-A0W2 TCGA-BG-A0YU TCGA-BG-A186 TCGA-BG-A187 TCGA-BG-A18A 
       28.54        37.84        14.83        13.78        14.73        14.01 
TCGA-BG-A18B TCGA-BG-A220 TCGA-BG-A222 TCGA-BG-A2L7 TCGA-BG-A3EW TCGA-BK-A0CA 
       15.45        14.27         9.57         5.82        11.31        34.98 
TCGA-BK-A0CB TCGA-BK-A13B TCGA-BK-A13C TCGA-BK-A56F TCGA-BS-A0T9 TCGA-BS-A0TA 
        6.18        31.76        24.99         6.58        46.95        23.47 
TCGA-BS-A0TC TCGA-BS-A0TD TCGA-BS-A0TG TCGA-BS-A0TJ TCGA-BS-A0U5 TCGA-BS-A0U7 
       85.55        78.18        77.92        67.99        96.49        30.71 
TCGA-BS-A0U8 TCGA-BS-A0UA TCGA-BS-A0UF TCGA-BS-A0UJ TCGA-BS-A0UL TCGA-BS-A0V4 
       97.41        88.31        85.84        82.39        81.57        59.51 
TCGA-BS-A0V6 TCGA-BS-A0VI TCGA-BS-A0WQ TCGA-D1-A0ZN TCGA-D1-A0ZO TCGA-D1-A0ZR 
       62.79        63.16        66.44        16.83        19.79         0.56 
TCGA-D1-A0ZS TCGA-D1-A0ZU TCGA-D1-A0ZV TCGA-D1-A101 TCGA-D1-A103 TCGA-D1-A15W 
        4.83        28.67        23.93         1.74        21.99        30.08 
TCGA-D1-A15X TCGA-D1-A15Z TCGA-D1-A160 TCGA-D1-A161 TCGA-D1-A163 TCGA-D1-A165 
       29.88         1.91         3.68        29.33        32.58         0.66 
TCGA-D1-A167 TCGA-D1-A16B TCGA-D1-A16D TCGA-D1-A16E TCGA-D1-A16G TCGA-D1-A16J 
       15.72        36.36        37.51        36.79        27.42        29.88 
TCGA-D1-A16O TCGA-D1-A16Q TCGA-D1-A16R TCGA-D1-A16X TCGA-D1-A16Y TCGA-D1-A174 
       33.60        10.65         0.69         3.65        17.49        19.53 
TCGA-D1-A175 TCGA-D1-A176 TCGA-D1-A177 TCGA-D1-A17A TCGA-D1-A17B TCGA-D1-A17C 
        6.64        30.15        18.02         1.58         6.97         0.99 
TCGA-D1-A17D TCGA-D1-A17F TCGA-D1-A17H TCGA-D1-A17L TCGA-D1-A17M TCGA-D1-A17N 
       30.44         1.28        28.01        26.37        10.22         1.51 
TCGA-D1-A17Q TCGA-D1-A17S TCGA-D1-A17T TCGA-D1-A17U TCGA-D1-A1NS TCGA-D1-A1NY 
        1.78        24.30         2.30        22.92         1.41        16.87 
TCGA-D1-A1NZ TCGA-D1-A1O5 TCGA-D1-A1O7 TCGA-D1-A1O8 TCGA-D1-A2G0 TCGA-D1-A3DA 
       18.02        15.06         1.05         3.95         3.52         0.26 
TCGA-DI-A0WH TCGA-DI-A1BU TCGA-DI-A1BY TCGA-DI-A1C3 TCGA-E6-A1LX TCGA-E6-A1M0 
       16.27        39.29        36.62        24.30        23.38        17.03 
TCGA-E6-A2P8 TCGA-E6-A2P9 TCGA-EC-A1NJ TCGA-EC-A1QX TCGA-EC-A24G TCGA-EO-A22R 
        2.37         6.64        16.01         7.33        16.77        31.96 
TCGA-EO-A22S TCGA-EO-A22T TCGA-EO-A22U TCGA-EO-A22X TCGA-EO-A3AU TCGA-EO-A3AY 
       35.05        33.01        27.12        32.25        19.36        12.89 
TCGA-EY-A1G8 TCGA-EY-A1GD TCGA-EY-A1GE TCGA-EY-A1GF TCGA-EY-A1GI TCGA-EY-A1GK 
       14.96         8.15        24.36        27.16        23.31        22.78 
TCGA-EY-A1GL TCGA-EY-A1GT TCGA-EY-A1GU TCGA-EY-A1H0 TCGA-EY-A215 TCGA-EY-A2OM 
       13.94        16.11        12.43        19.33        18.87        22.82 
TCGA-EY-A2OP TCGA-EY-A548 TCGA-EY-A549 TCGA-FI-A2CX TCGA-FI-A2D0 TCGA-FI-A2D5 
       31.00         2.14         6.97        40.01        33.99        14.01 
TCGA-FI-A2D6 TCGA-FI-A2F4 
        8.98        28.93 

$subtype2
TCGA-A5-A0G2 TCGA-AP-A3K1 TCGA-B5-A1MU TCGA-BG-A0VT TCGA-BG-A2AE TCGA-BS-A0TI 
      149.52        18.25        50.86         7.36         0.53        61.87 
TCGA-D1-A17R TCGA-EY-A1G7 
       11.15         6.21 

$subtype3
TCGA-A5-A0G5 TCGA-A5-A0GJ TCGA-A5-A0GR TCGA-A5-A0R6 TCGA-A5-A1OG TCGA-A5-A1OH 
       37.02        65.75        36.82        19.96        11.44        36.30 
TCGA-A5-A2K2 TCGA-A5-A2K3 TCGA-A5-A2K4 TCGA-A5-A3LP TCGA-AJ-A23M TCGA-AJ-A23N 
       91.00        46.32        28.64        14.96         1.02         1.08 
TCGA-AJ-A2QK TCGA-AJ-A2QM TCGA-AJ-A3BD TCGA-AJ-A3BF TCGA-AJ-A3BI TCGA-AJ-A3EJ 
        0.39         1.02         0.49         1.12         2.01         1.64 
TCGA-AJ-A3EM TCGA-AJ-A3IA TCGA-AJ-A3NF TCGA-AJ-A3NH TCGA-AJ-A3QS TCGA-AJ-A3TW 
        1.64         0.92         1.35         0.76         1.84         1.68 
TCGA-AP-A052 TCGA-AP-A053 TCGA-AP-A05A TCGA-AP-A05D TCGA-AP-A05H TCGA-AP-A05J 
       21.99         5.95        39.39        57.80        45.53        36.89 
TCGA-AP-A0L8 TCGA-AP-A0L9 TCGA-AP-A0LF TCGA-AP-A0LI TCGA-AP-A1DQ TCGA-AW-A1PO 
       48.79       125.39         3.39        97.71        41.92         0.56 
TCGA-AX-A06B TCGA-AX-A0IU TCGA-AX-A0IW TCGA-AX-A1C7 TCGA-AX-A1C8 TCGA-AX-A1CA 
       53.88        28.54        37.74        16.93        13.55        20.28 
TCGA-AX-A1CF TCGA-AX-A1CP TCGA-AX-A1CR TCGA-AX-A2H2 TCGA-AX-A2H4 TCGA-AX-A2H5 
       76.83        36.39        11.08         4.77        30.08        71.24 
TCGA-AX-A2H8 TCGA-AX-A2HF TCGA-AX-A2HK TCGA-AX-A2IO TCGA-AX-A3FW TCGA-AX-A3FX 
       61.18        16.08         2.96        38.66         0.33         0.13 
TCGA-AX-A3G1 TCGA-AX-A3G3 TCGA-AX-A3G4 TCGA-AX-A3G7 TCGA-AX-A3GI TCGA-B5-A0JN 
       20.52         0.03         0.13         0.23         0.13        80.38 
TCGA-B5-A0K3 TCGA-B5-A0K8 TCGA-B5-A0KB TCGA-B5-A11I TCGA-B5-A1MS TCGA-B5-A1MY 
       23.01        17.82         4.08        75.72       102.05        11.87 
TCGA-B5-A1N2 TCGA-B5-A3S1 TCGA-BG-A0M6 TCGA-BG-A0M8 TCGA-BG-A0MT TCGA-BG-A0YV 
       12.79         5.00         7.92        36.49        21.17        12.56 
TCGA-BG-A3PP TCGA-BK-A0CC TCGA-BK-A139 TCGA-BK-A26L TCGA-BK-A4ZD TCGA-BS-A0U9 
        6.81        10.22        10.16        24.13         6.94        67.20 
TCGA-BS-A0V8 TCGA-D1-A0ZP TCGA-D1-A0ZQ TCGA-D1-A0ZZ TCGA-D1-A15V TCGA-D1-A16I 
       49.55        29.95         8.55        22.52        39.48        11.47 
TCGA-D1-A16N TCGA-D1-A16S TCGA-D1-A16V TCGA-D1-A179 TCGA-D1-A17K TCGA-D1-A1NU 
       31.07        18.67         1.41         6.77        28.08        13.22 
TCGA-D1-A1NW TCGA-D1-A1NX TCGA-D1-A1O0 TCGA-D1-A2G7 TCGA-D1-A3DG TCGA-D1-A3DH 
        0.72        18.25         2.07        44.88         4.27         4.11 
TCGA-DI-A1NN TCGA-DI-A1NO TCGA-DI-A2QT TCGA-DI-A2QU TCGA-DI-A2QY TCGA-E6-A1LZ 
       35.38         9.37        12.39        31.10        91.96        48.36 
TCGA-EO-A1Y5 TCGA-EO-A1Y7 TCGA-EO-A1Y8 TCGA-EO-A2CG TCGA-EO-A2CH TCGA-EO-A3AS 
       10.92         7.99        10.78        32.02        19.40        34.39 
TCGA-EY-A1GC TCGA-EY-A1GJ TCGA-EY-A1GM TCGA-EY-A1GR TCGA-EY-A1GS TCGA-EY-A1GV 
        4.54        23.90         6.87        17.62        15.09        15.81 
TCGA-EY-A210 TCGA-EY-A212 TCGA-EY-A214 TCGA-EY-A2ON TCGA-EY-A2OQ TCGA-EY-A3L3 
       12.59         3.58        14.40        13.45        29.06         8.48 
TCGA-EY-A3QX TCGA-EY-A4KR TCGA-EY-A547 TCGA-EY-A54A TCGA-FI-A2CY TCGA-FI-A2D2 
       13.84         6.44        17.88         3.72        34.98        36.00 
TCGA-FI-A2EU TCGA-FI-A2EW TCGA-FI-A2EX TCGA-FI-A2EY TCGA-FI-A2F8 TCGA-FI-A2F9 
       97.08        59.01         9.07        29.03        25.02        26.01 
TCGA-FI-A3PV TCGA-H5-A2HR TCGA-K6-A3WQ TCGA-KJ-A3U4 TCGA-PG-A5BC 
       41.06         1.74         6.67         2.40        10.82 

$subtype4
TCGA-A5-A0GN TCGA-A5-A0GV TCGA-AX-A05W TCGA-AX-A2HH TCGA-B5-A11P TCGA-BG-A0M2 
       60.53        20.81        68.32        17.72        36.82        20.91 
TCGA-BG-A0RY TCGA-BS-A0V7 TCGA-EY-A1GH TCGA-EY-A1GO TCGA-EY-A2OO TCGA-FI-A2D4 
       15.42        63.58        23.31        19.27        45.76         7.96 

$subtype5
TCGA-A5-A0R7 TCGA-A5-A3LO TCGA-AJ-A2QN TCGA-AJ-A3I9 TCGA-AP-A1DO TCGA-AX-A3FZ 
       17.56         7.33         2.01         1.28        31.30         0.20 
TCGA-B5-A0JT TCGA-B5-A11V TCGA-BG-A0MS TCGA-BG-A0W1 TCGA-BG-A18C TCGA-BG-A221 
       43.13        19.53        30.81        29.82        15.45         1.81 
TCGA-BS-A0TE TCGA-BS-A0UT TCGA-D1-A102 TCGA-D1-A169 TCGA-D1-A2G5 TCGA-EY-A1GP 
        4.80        72.72         4.44        37.32        41.42        18.84 
TCGA-EY-A1GW TCGA-EY-A1GX 
        8.55         6.48 

$subtype6
TCGA-AP-A0LO TCGA-AX-A2H7 TCGA-B5-A11E TCGA-B5-A11R TCGA-B5-A11S TCGA-BG-A0M4 
       33.40        33.53         8.71        33.50        27.32        34.98 
TCGA-BK-A0C9 TCGA-BS-A0UV TCGA-D1-A168 TCGA-D1-A2G6 TCGA-EO-A22Y TCGA-EY-A1GQ 
       12.69        73.25        36.10         8.48        25.02        17.88 

subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
    0.10     0.53     0.03     7.96     0.20     8.48 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
  191.84   149.52   125.39    68.32    72.72    73.25 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
  24.300   14.700   15.090   22.110   16.505   30.360 
[1] "0.1 - 191.8 (24.3)" "0.5 - 149.5 (14.7)" "0.0 - 125.4 (15.1)"
[4] "8.0 - 68.3 (22.1)"  "0.2 - 72.7 (16.5)"  "8.5 - 73.2 (30.4)" 
  [1] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
  [7] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [13] "subtype1" "subtype4" "subtype1" "subtype1" "subtype3" "subtype1"
 [19] "subtype4" "subtype1" "subtype1" "subtype3" "subtype5" "subtype1"
 [25] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [31] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
 [37] "subtype1" "subtype1" "subtype5" "subtype3" "subtype3" "subtype3"
 [43] "subtype1" "subtype3" "subtype1" "subtype3" "subtype5" "subtype1"
 [49] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
 [55] "subtype1" "subtype1" "subtype3" "subtype5" "subtype3" "subtype1"
 [61] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
 [67] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
 [73] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
 [79] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [85] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
 [91] "subtype1" "subtype1" "subtype1" "subtype1" "subtype6" "subtype1"
 [97] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[103] "subtype1" "subtype5" "subtype1" "subtype3" "subtype1" "subtype1"
[109] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[115] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype1"
[121] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[133] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[139] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[145] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[151] "subtype3" "subtype3" "subtype3" "subtype3" "subtype6" "subtype3"
[157] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype4"
[163] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[169] "subtype3" "subtype3" "subtype5" "subtype3" "subtype3" "subtype3"
[175] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[181] "subtype1" "subtype1" "subtype5" "subtype1" "subtype1" "subtype1"
[187] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[193] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[199] "subtype6" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[205] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype6"
[211] "subtype6" "subtype1" "subtype5" "subtype1" "subtype1" "subtype1"
[217] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[223] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[229] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype6"
[235] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[241] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype5"
[247] "subtype3" "subtype1" "subtype4" "subtype2" "subtype1" "subtype1"
[253] "subtype1" "subtype1" "subtype5" "subtype1" "subtype1" "subtype3"
[259] "subtype1" "subtype1" "subtype1" "subtype1" "subtype5" "subtype1"
[265] "subtype5" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[271] "subtype6" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[277] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[283] "subtype1" "subtype1" "subtype5" "subtype1" "subtype2" "subtype1"
[289] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[295] "subtype1" "subtype1" "subtype5" "subtype6" "subtype1" "subtype1"
[301] "subtype4" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[307] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[313] "subtype3" "subtype1" "subtype5" "subtype1" "subtype3" "subtype1"
[319] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[325] "subtype1" "subtype6" "subtype5" "subtype1" "subtype1" "subtype1"
[331] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[337] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[343] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[349] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[355] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[361] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[367] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[373] "subtype5" "subtype6" "subtype3" "subtype1" "subtype3" "subtype3"
[379] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[385] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[391] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[397] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[403] "subtype1" "subtype6" "subtype3" "subtype3" "subtype3" "subtype1"
[409] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[415] "subtype1" "subtype4" "subtype1" "subtype3" "subtype1" "subtype1"
[421] "subtype3" "subtype4" "subtype5" "subtype6" "subtype3" "subtype3"
[427] "subtype1" "subtype1" "subtype3" "subtype5" "subtype5" "subtype1"
[433] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[439] "subtype4" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[445] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[451] "subtype1" "subtype3" "subtype4" "subtype1" "subtype1" "subtype3"
[457] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[463] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
  [1] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
  [7] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [13] "subtype1" "subtype4" "subtype1" "subtype1" "subtype3" "subtype1"
 [19] "subtype4" "subtype1" "subtype1" "subtype3" "subtype5" "subtype1"
 [25] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [31] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
 [37] "subtype1" "subtype1" "subtype5" "subtype3" "subtype3" "subtype3"
 [43] "subtype1" "subtype3" "subtype1" "subtype3" "subtype5" "subtype1"
 [49] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
 [55] "subtype1" "subtype1" "subtype3" "subtype5" "subtype3" "subtype1"
 [61] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
 [67] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
 [73] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
 [79] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [85] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
 [91] "subtype1" "subtype1" "subtype1" "subtype1" "subtype6" "subtype1"
 [97] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[103] "subtype1" "subtype5" "subtype1" "subtype3" "subtype1" "subtype1"
[109] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[115] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype1"
[121] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[133] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[139] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[145] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[151] "subtype3" "subtype3" "subtype3" "subtype3" "subtype6" "subtype3"
[157] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype4"
[163] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[169] "subtype3" "subtype3" "subtype5" "subtype3" "subtype3" "subtype3"
[175] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[181] "subtype1" "subtype1" "subtype5" "subtype1" "subtype1" "subtype1"
[187] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[193] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[199] "subtype6" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[205] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype6"
[211] "subtype6" "subtype1" "subtype5" "subtype1" "subtype1" "subtype1"
[217] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[223] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[229] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype6"
[235] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[241] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype5"
[247] "subtype3" "subtype1" "subtype4" "subtype2" "subtype1" "subtype1"
[253] "subtype1" "subtype1" "subtype5" "subtype1" "subtype1" "subtype3"
[259] "subtype1" "subtype1" "subtype1" "subtype1" "subtype5" "subtype1"
[265] "subtype5" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[271] "subtype6" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[277] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[283] "subtype1" "subtype1" "subtype5" "subtype1" "subtype2" "subtype1"
[289] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[295] "subtype1" "subtype1" "subtype5" "subtype6" "subtype1" "subtype1"
[301] "subtype4" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[307] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[313] "subtype3" "subtype1" "subtype5" "subtype1" "subtype3" "subtype1"
[319] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[325] "subtype1" "subtype6" "subtype5" "subtype1" "subtype1" "subtype1"
[331] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[337] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[343] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[349] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[355] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[361] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[367] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[373] "subtype5" "subtype6" "subtype3" "subtype1" "subtype3" "subtype3"
[379] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[385] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[391] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[397] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[403] "subtype1" "subtype6" "subtype3" "subtype3" "subtype3" "subtype1"
[409] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[415] "subtype1" "subtype4" "subtype1" "subtype3" "subtype1" "subtype1"
[421] "subtype3" "subtype4" "subtype5" "subtype6" "subtype3" "subtype3"
[427] "subtype1" "subtype1" "subtype3" "subtype5" "subtype5" "subtype1"
[433] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[439] "subtype4" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[445] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[451] "subtype1" "subtype3" "subtype4" "subtype1" "subtype1" "subtype3"
[457] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[463] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
  [1] "subtype1" "subtype2" "subtype3" "subtype1" "subtype1" "subtype1"
  [7] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [13] "subtype1" "subtype4" "subtype1" "subtype1" "subtype3" "subtype1"
 [19] "subtype4" "subtype1" "subtype1" "subtype3" "subtype5" "subtype1"
 [25] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
 [31] "subtype3" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
 [37] "subtype1" "subtype1" "subtype5" "subtype3" "subtype3" "subtype3"
 [43] "subtype1" "subtype3" "subtype1" "subtype3" "subtype5" "subtype1"
 [49] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
 [55] "subtype1" "subtype1" "subtype3" "subtype5" "subtype3" "subtype1"
 [61] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
 [67] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
 [73] "subtype1" "subtype1" "subtype1" "subtype3" "subtype3" "subtype3"
 [79] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
 [85] "subtype1" "subtype1" "subtype3" "subtype1" "subtype1" "subtype3"
 [91] "subtype1" "subtype1" "subtype1" "subtype1" "subtype6" "subtype1"
 [97] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[103] "subtype1" "subtype5" "subtype1" "subtype3" "subtype1" "subtype1"
[109] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype3"
[115] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype1"
[121] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[127] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[133] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[139] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[145] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[151] "subtype3" "subtype3" "subtype3" "subtype3" "subtype6" "subtype3"
[157] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype4"
[163] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[169] "subtype3" "subtype3" "subtype5" "subtype3" "subtype3" "subtype3"
[175] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[181] "subtype1" "subtype1" "subtype5" "subtype1" "subtype1" "subtype1"
[187] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[193] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[199] "subtype6" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[205] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype6"
[211] "subtype6" "subtype1" "subtype5" "subtype1" "subtype1" "subtype1"
[217] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
[223] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[229] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype6"
[235] "subtype3" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
[241] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype5"
[247] "subtype3" "subtype1" "subtype4" "subtype2" "subtype1" "subtype1"
[253] "subtype1" "subtype1" "subtype5" "subtype1" "subtype1" "subtype3"
[259] "subtype1" "subtype1" "subtype1" "subtype1" "subtype5" "subtype1"
[265] "subtype5" "subtype1" "subtype2" "subtype1" "subtype1" "subtype3"
[271] "subtype6" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[277] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[283] "subtype1" "subtype1" "subtype5" "subtype1" "subtype2" "subtype1"
[289] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[295] "subtype1" "subtype1" "subtype5" "subtype6" "subtype1" "subtype1"
[301] "subtype4" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[307] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[313] "subtype3" "subtype1" "subtype5" "subtype1" "subtype3" "subtype1"
[319] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[325] "subtype1" "subtype6" "subtype5" "subtype1" "subtype1" "subtype1"
[331] "subtype1" "subtype3" "subtype1" "subtype3" "subtype1" "subtype1"
[337] "subtype1" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[343] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
[349] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[355] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[361] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype1"
[367] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[373] "subtype5" "subtype6" "subtype3" "subtype1" "subtype3" "subtype3"
[379] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[385] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[391] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype3"
[397] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[403] "subtype1" "subtype6" "subtype3" "subtype3" "subtype3" "subtype1"
[409] "subtype1" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
[415] "subtype1" "subtype4" "subtype1" "subtype3" "subtype1" "subtype1"
[421] "subtype3" "subtype4" "subtype5" "subtype6" "subtype3" "subtype3"
[427] "subtype1" "subtype1" "subtype3" "subtype5" "subtype5" "subtype1"
[433] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[439] "subtype4" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[445] "subtype3" "subtype1" "subtype1" "subtype3" "subtype1" "subtype3"
[451] "subtype1" "subtype3" "subtype4" "subtype1" "subtype1" "subtype3"
[457] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[463] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
D3V2, continuous
          vv
clus       ENDOMETRIOID ENDOMETRIAL ADENOCARCINOMA
  subtype1                                     267
  subtype2                                       5
  subtype3                                      44
  subtype4                                      11
  subtype5                                      20
  subtype6                                      12
          vv
clus       MIXED SEROUS AND ENDOMETRIOID SEROUS ENDOMETRIAL ADENOCARCINOMA
  subtype1                             8                                 5
  subtype2                             0                                 3
  subtype3                             9                                85
  subtype4                             1                                 0
  subtype5                             0                                 0
  subtype6                             0                                 0
D3V3, multiclass
D3V4, binary
          cls
clus         0   1
  subtype1  95 185
  subtype2   1   7
  subtype3  29 109
  subtype4   5   7
  subtype5   2  18
  subtype6   3   9
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   95  185
  subtype2    1    7
  subtype3   29  109
  subtype4    5    7
  subtype5    2   18
  subtype6    3    9
          vv
clus        R0  R1  R2  RX
  subtype1 199  14   4  15
  subtype2   5   0   0   1
  subtype3  90   8  10   8
  subtype4   9   1   1   0
  subtype5  12   1   1   2
  subtype6   9   0   0   0
D3V5, multiclass

Clustering(4) Variable = METHLYATION_CNMF
D4V1, survival
          sevent
clus2        0   1
  subtype1 106  23
  subtype2  76   5
  subtype3 136  13
subtype1 subtype2 subtype3 
     129       81      149 
subtype1 subtype2 subtype3 
      23        5       13 
$subtype1
TCGA-A5-A0G1 TCGA-A5-A0GR TCGA-A5-A1OF TCGA-A5-A1OG TCGA-A5-A1OH TCGA-A5-A2K2 
      106.88        36.82         7.92        11.44        36.30        91.00 
TCGA-A5-A2K3 TCGA-A5-A2K4 TCGA-A5-A3LP TCGA-AJ-A23M TCGA-AJ-A2QM TCGA-AJ-A3BF 
       46.32        28.64        14.96         1.02         1.02         1.12 
TCGA-AJ-A3EJ TCGA-AJ-A3EL TCGA-AJ-A3EM TCGA-AJ-A3IA TCGA-AJ-A3NE TCGA-AJ-A3NF 
        1.64         2.14         1.64         0.92         2.56         1.35 
TCGA-AJ-A3NH TCGA-AJ-A3OJ TCGA-AJ-A3QS TCGA-AJ-A3TW TCGA-AP-A059 TCGA-AP-A0LF 
        0.76         1.94         1.84         1.68         8.22         3.39 
TCGA-AP-A0LM TCGA-AP-A1DK TCGA-AP-A1E3 TCGA-AP-A1E4 TCGA-AP-A3K1 TCGA-AX-A06D 
       27.12        60.36        27.85        16.24        18.25        12.26 
TCGA-AX-A0IZ TCGA-AX-A1C5 TCGA-AX-A1C7 TCGA-AX-A1C8 TCGA-AX-A1CA TCGA-AX-A1CC 
       43.82        19.20        16.93        13.55        20.28        12.43 
TCGA-AX-A1CF TCGA-AX-A1CN TCGA-AX-A1CR TCGA-AX-A2H2 TCGA-AX-A2H4 TCGA-AX-A2H5 
       76.83        25.12        11.08         4.77        30.08        71.24 
TCGA-AX-A2H8 TCGA-AX-A2HF TCGA-AX-A2HG TCGA-AX-A2HK TCGA-AX-A2IN TCGA-AX-A3FT 
       61.18        16.08        21.70         2.96        31.10         0.10 
TCGA-AX-A3FZ TCGA-AX-A3G3 TCGA-AX-A3G7 TCGA-AX-A3G8 TCGA-AX-A3GI TCGA-B5-A0K8 
        0.20         0.03         0.23         1.18         0.13        17.82 
TCGA-B5-A0KB TCGA-B5-A11I TCGA-B5-A11O TCGA-B5-A11X TCGA-B5-A1MR TCGA-B5-A1MU 
        4.08        75.72        40.93        19.56       191.84        50.86 
TCGA-B5-A1MY TCGA-B5-A1N2 TCGA-B5-A3S1 TCGA-BG-A0YV TCGA-BG-A18C TCGA-BG-A220 
       11.87        12.79         5.00        12.56        15.45        14.27 
TCGA-BG-A221 TCGA-BG-A2AE TCGA-BK-A0CC TCGA-BK-A139 TCGA-BK-A26L TCGA-BS-A0U9 
        1.81         0.53        10.22        10.16        24.13        67.20 
TCGA-BS-A0V8 TCGA-D1-A0ZP TCGA-D1-A0ZS TCGA-D1-A15V TCGA-D1-A15X TCGA-D1-A168 
       49.55        29.95         4.83        39.48        29.88        36.10 
TCGA-D1-A16G TCGA-D1-A16I TCGA-D1-A16J TCGA-D1-A16S TCGA-D1-A179 TCGA-D1-A17K 
       27.42        11.47        29.88        18.67         6.77        28.08 
TCGA-D1-A1NU TCGA-D1-A1NW TCGA-D1-A1NX TCGA-D1-A1O8 TCGA-D1-A2G0 TCGA-D1-A3DH 
       13.22         0.72        18.25         3.95         3.52         4.11 
TCGA-DI-A1BU TCGA-DI-A1NN TCGA-DI-A1NO TCGA-DI-A2QT TCGA-E6-A1LZ TCGA-E6-A2P8 
       39.29        35.38         9.37        12.39        48.36         2.37 
TCGA-EC-A1QX TCGA-EO-A1Y5 TCGA-EO-A1Y8 TCGA-EO-A22T TCGA-EO-A22X TCGA-EY-A1G7 
        7.33        10.92        10.78        33.01        32.25         6.21 
TCGA-EY-A1GC TCGA-EY-A1GJ TCGA-EY-A1GM TCGA-EY-A1GO TCGA-EY-A1GP TCGA-EY-A1GS 
        4.54        23.90         6.87        19.27        18.84        15.09 
TCGA-EY-A1GV TCGA-EY-A212 TCGA-EY-A214 TCGA-EY-A2ON TCGA-EY-A2OO TCGA-EY-A3L3 
       15.81         3.58        14.40        13.45        45.76         8.48 
TCGA-EY-A3QX TCGA-EY-A4KR TCGA-EY-A54A TCGA-FI-A2CX TCGA-FI-A2CY TCGA-FI-A2D2 
       13.84         6.44         3.72        40.01        34.98        36.00 
TCGA-FI-A2D6 TCGA-FI-A2EU TCGA-FI-A2EW TCGA-FI-A2EX TCGA-FI-A2EY TCGA-FI-A2F8 
        8.98        97.08        59.01         9.07        29.03        25.02 
TCGA-FI-A3PV TCGA-H5-A2HR TCGA-KJ-A3U4 
       41.06         1.74         2.40 

$subtype2
TCGA-A5-A0GG TCGA-A5-A0GQ TCGA-A5-A1OJ TCGA-A5-A1OK TCGA-A5-A3LO TCGA-AJ-A23N 
       87.32        38.37         9.60         7.99         7.33         1.08 
TCGA-AJ-A2QK TCGA-AJ-A3BD TCGA-AJ-A3NC TCGA-AJ-A3OK TCGA-AP-A1DQ TCGA-AW-A1PO 
        0.39         0.49         6.90         4.67        41.92         0.56 
TCGA-AX-A06L TCGA-AX-A0J0 TCGA-AX-A1C9 TCGA-AX-A1CJ TCGA-AX-A1CP TCGA-AX-A2H7 
       60.62        40.08        15.25        54.08        36.39        33.53 
TCGA-AX-A2HH TCGA-AX-A2IO TCGA-AX-A3G4 TCGA-B5-A11M TCGA-B5-A11P TCGA-B5-A11R 
       17.72        38.66         0.13        44.75        36.82        33.50 
TCGA-B5-A11S TCGA-B5-A11U TCGA-B5-A11Y TCGA-B5-A121 TCGA-B5-A1MS TCGA-BG-A0VV 
       27.32        16.73        18.38        16.57       102.05         8.55 
TCGA-BG-A0VX TCGA-BG-A0W1 TCGA-BG-A0W2 TCGA-BG-A0YU TCGA-BG-A186 TCGA-BG-A18A 
       16.11        29.82        37.84        14.83        13.78        14.01 
TCGA-BG-A3PP TCGA-BK-A56F TCGA-BS-A0T9 TCGA-BS-A0UL TCGA-BS-A0V7 TCGA-BS-A0WQ 
        6.81         6.58        46.95        81.57        63.58        66.44 
TCGA-D1-A0ZR TCGA-D1-A0ZV TCGA-D1-A0ZZ TCGA-D1-A15W TCGA-D1-A162 TCGA-D1-A165 
        0.56        23.93        22.52        30.08        37.64         0.66 
TCGA-D1-A16B TCGA-D1-A16D TCGA-D1-A16E TCGA-D1-A16O TCGA-D1-A16Q TCGA-D1-A16R 
       36.36        37.51        36.79        33.60        10.65         0.69 
TCGA-D1-A16X TCGA-D1-A16Y TCGA-D1-A17B TCGA-D1-A17C TCGA-D1-A17L TCGA-D1-A17N 
        3.65        17.49         6.97         0.99        26.37         1.51 
TCGA-D1-A17S TCGA-D1-A1O5 TCGA-D1-A2G7 TCGA-D1-A3DG TCGA-DI-A0WH TCGA-DI-A1BY 
       24.30        15.06        44.88         4.27        16.27        36.62 
TCGA-DI-A1C3 TCGA-DI-A2QU TCGA-DI-A2QY TCGA-EO-A2CG TCGA-EO-A2CH TCGA-EO-A3AS 
       24.30        31.10        91.96        32.02        19.40        34.39 
TCGA-EY-A1GE TCGA-EY-A1GR TCGA-EY-A210 TCGA-EY-A2OQ TCGA-EY-A547 TCGA-FI-A2D0 
       24.36        17.62        12.59        29.06        17.88        33.99 
TCGA-FI-A2F9 TCGA-K6-A3WQ TCGA-PG-A5BC 
       26.01         6.67        10.82 

$subtype3
TCGA-A5-A0VO TCGA-A5-A2K5 TCGA-A5-A2K7 TCGA-AJ-A23O TCGA-AJ-A2QL TCGA-AJ-A2QN 
       11.97         5.29         5.13         1.97        19.79         2.01 
TCGA-AJ-A2QO TCGA-AJ-A3BG TCGA-AJ-A3BI TCGA-AJ-A3BK TCGA-AJ-A3EK TCGA-AJ-A3I9 
        2.99         1.02         2.01         1.68         2.10         1.28 
TCGA-AJ-A3NG TCGA-AJ-A3OL TCGA-AP-A05O TCGA-AP-A0LS TCGA-AP-A1DH TCGA-AP-A1DM 
        1.71         1.87        12.20        63.06        71.67        55.89 
TCGA-AP-A1DO TCGA-AP-A1DP TCGA-AP-A1DR TCGA-AP-A1DV TCGA-AP-A1E0 TCGA-AP-A1E1 
       31.30        35.54        49.15         6.71        30.90        10.42 
TCGA-AX-A06H TCGA-AX-A0IS TCGA-AX-A1C4 TCGA-AX-A1CE TCGA-AX-A1CI TCGA-AX-A1CK 
       27.39        35.01        13.28        20.05        72.56        67.46 
TCGA-AX-A2HA TCGA-AX-A2HC TCGA-AX-A2HD TCGA-AX-A2HJ TCGA-AX-A3FS TCGA-AX-A3FW 
       68.71        33.40        40.50        27.32         0.23         0.33 
TCGA-AX-A3FX TCGA-AX-A3G1 TCGA-AX-A3G9 TCGA-AX-A3GB TCGA-B5-A0JT TCGA-B5-A0JU 
        0.13        20.52         8.35        14.47        43.13        48.76 
TCGA-B5-A0JX TCGA-B5-A11E TCGA-B5-A11F TCGA-B5-A11G TCGA-B5-A11H TCGA-B5-A11J 
       44.71         8.71       185.75       113.33        88.34        54.44 
TCGA-B5-A11L TCGA-B5-A11N TCGA-B5-A11Q TCGA-B5-A11V TCGA-B5-A11W TCGA-B5-A11Z 
       45.90        43.96        32.05        19.53        19.46        17.36 
TCGA-B5-A1MV TCGA-B5-A1MW TCGA-B5-A1MX TCGA-B5-A1MZ TCGA-B5-A3FC TCGA-BG-A0MA 
       14.40        14.70        11.67        15.29        62.14        10.72 
TCGA-BG-A0MH TCGA-BG-A0MK TCGA-BG-A0VT TCGA-BG-A0VW TCGA-BG-A0VZ TCGA-BG-A187 
       44.09        43.30         7.36         4.31        28.54        14.73 
TCGA-BG-A18B TCGA-BG-A222 TCGA-BG-A2L7 TCGA-BG-A3EW TCGA-BK-A0CA TCGA-BK-A13B 
       15.45         9.57         5.82        11.31        34.98        31.76 
TCGA-BK-A13C TCGA-BK-A4ZD TCGA-BS-A0U5 TCGA-BS-A0UA TCGA-BS-A0V4 TCGA-BS-A0V6 
       24.99         6.94        96.49        88.31        59.51        62.79 
TCGA-BS-A0VI TCGA-D1-A0ZN TCGA-D1-A0ZO TCGA-D1-A0ZQ TCGA-D1-A0ZU TCGA-D1-A101 
       63.16        16.83        19.79         8.55        28.67         1.74 
TCGA-D1-A102 TCGA-D1-A103 TCGA-D1-A15Z TCGA-D1-A160 TCGA-D1-A161 TCGA-D1-A163 
        4.44        21.99         1.91         3.68        29.33        32.58 
TCGA-D1-A167 TCGA-D1-A169 TCGA-D1-A16F TCGA-D1-A16N TCGA-D1-A16V TCGA-D1-A174 
       15.72        37.32         2.63        31.07         1.41        19.53 
TCGA-D1-A175 TCGA-D1-A176 TCGA-D1-A177 TCGA-D1-A17A TCGA-D1-A17D TCGA-D1-A17F 
        6.64        30.15        18.02         1.58        30.44         1.28 
TCGA-D1-A17H TCGA-D1-A17M TCGA-D1-A17Q TCGA-D1-A17R TCGA-D1-A17T TCGA-D1-A17U 
       28.01        10.22         1.78        11.15         2.30        22.92 
TCGA-D1-A1NS TCGA-D1-A1NY TCGA-D1-A1NZ TCGA-D1-A1O0 TCGA-D1-A1O7 TCGA-D1-A2G5 
        1.41        16.87        18.02         2.07         1.05        41.42 
TCGA-D1-A2G6 TCGA-D1-A3DA TCGA-E6-A1LX TCGA-E6-A1M0 TCGA-E6-A2P9 TCGA-EC-A1NJ 
        8.48         0.26        23.38        17.03         6.64        16.01 
TCGA-EC-A24G TCGA-EO-A1Y7 TCGA-EO-A22R TCGA-EO-A22S TCGA-EO-A22U TCGA-EO-A22Y 
       16.77         7.99        31.96        35.05        27.12        25.02 
TCGA-EO-A3AU TCGA-EO-A3AY TCGA-EY-A1G8 TCGA-EY-A1GD TCGA-EY-A1GF TCGA-EY-A1GH 
       19.36        12.89        14.96         8.15        27.16        23.31 
TCGA-EY-A1GI TCGA-EY-A1GK TCGA-EY-A1GL TCGA-EY-A1GQ TCGA-EY-A1GT TCGA-EY-A1GU 
       23.31        22.78        13.94        17.88        16.11        12.43 
TCGA-EY-A1GW TCGA-EY-A1GX TCGA-EY-A1H0 TCGA-EY-A215 TCGA-EY-A2OM TCGA-EY-A2OP 
        8.55         6.48        19.33        18.87        22.82        31.00 
TCGA-EY-A548 TCGA-EY-A549 TCGA-FI-A2D4 TCGA-FI-A2D5 TCGA-FI-A2F4 
        2.14         6.97         7.96        14.01        28.93 

subtype1 subtype2 subtype3 
    0.03     0.13     0.13 
subtype1 subtype2 subtype3 
  191.84   102.05   185.75 
subtype1 subtype2 subtype3 
   13.84    22.52    17.03 
[1] "0.0 - 191.8 (13.8)" "0.1 - 102.0 (22.5)" "0.1 - 185.8 (17.0)"
  [1] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
  [7] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
 [13] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
 [19] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
 [25] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [31] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
 [37] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
 [43] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
 [49] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
 [55] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
 [61] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [67] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
 [73] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [79] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
 [85] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
 [91] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
 [97] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[103] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[109] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[115] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[121] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[127] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[133] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
[139] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[145] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[151] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[157] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[163] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[169] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[175] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[181] "subtype1" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[187] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
[193] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[199] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[205] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[211] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[217] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[223] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[229] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[235] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[241] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[247] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[253] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[259] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[265] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
[271] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[277] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[283] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[289] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[295] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[301] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[307] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[313] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
[319] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[325] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[331] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[337] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[343] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[349] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[355] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
  [1] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
  [7] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
 [13] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
 [19] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
 [25] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [31] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
 [37] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
 [43] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
 [49] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
 [55] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
 [61] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [67] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
 [73] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [79] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
 [85] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
 [91] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
 [97] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[103] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[109] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[115] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[121] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[127] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[133] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
[139] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[145] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[151] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[157] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[163] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[169] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[175] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[181] "subtype1" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[187] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
[193] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[199] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[205] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[211] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[217] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[223] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[229] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[235] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[241] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[247] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[253] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[259] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[265] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
[271] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[277] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[283] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[289] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[295] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[301] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[307] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[313] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
[319] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[325] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[331] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[337] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[343] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[349] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[355] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
  [1] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype1"
  [7] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
 [13] "subtype1" "subtype3" "subtype3" "subtype2" "subtype1" "subtype1"
 [19] "subtype2" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
 [25] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
 [31] "subtype1" "subtype3" "subtype1" "subtype1" "subtype3" "subtype1"
 [37] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype1"
 [43] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
 [49] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
 [55] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
 [61] "subtype3" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [67] "subtype3" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
 [73] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [79] "subtype3" "subtype1" "subtype3" "subtype2" "subtype3" "subtype1"
 [85] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
 [91] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype1"
 [97] "subtype2" "subtype3" "subtype1" "subtype1" "subtype2" "subtype3"
[103] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[109] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[115] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype3"
[121] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[127] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[133] "subtype2" "subtype2" "subtype3" "subtype3" "subtype1" "subtype2"
[139] "subtype3" "subtype2" "subtype1" "subtype2" "subtype1" "subtype3"
[145] "subtype3" "subtype3" "subtype1" "subtype3" "subtype1" "subtype3"
[151] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[157] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[163] "subtype1" "subtype2" "subtype3" "subtype2" "subtype3" "subtype1"
[169] "subtype1" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[175] "subtype2" "subtype3" "subtype1" "subtype1" "subtype3" "subtype3"
[181] "subtype1" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[187] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
[193] "subtype3" "subtype2" "subtype3" "subtype3" "subtype1" "subtype3"
[199] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[205] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype3"
[211] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[217] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[223] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype2"
[229] "subtype2" "subtype1" "subtype3" "subtype2" "subtype2" "subtype3"
[235] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype2"
[241] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype2"
[247] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[253] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[259] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
[265] "subtype3" "subtype3" "subtype2" "subtype3" "subtype2" "subtype1"
[271] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[277] "subtype1" "subtype2" "subtype2" "subtype3" "subtype1" "subtype3"
[283] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[289] "subtype3" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[295] "subtype1" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[301] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[307] "subtype3" "subtype3" "subtype3" "subtype1" "subtype3" "subtype3"
[313] "subtype1" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
[319] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[325] "subtype2" "subtype1" "subtype1" "subtype3" "subtype3" "subtype1"
[331] "subtype1" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[337] "subtype2" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
[343] "subtype2" "subtype1" "subtype3" "subtype3" "subtype1" "subtype1"
[349] "subtype1" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
[355] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
D4V2, continuous
          vv
clus       ENDOMETRIOID ENDOMETRIAL ADENOCARCINOMA
  subtype1                                      56
  subtype2                                      64
  subtype3                                     147
          vv
clus       MIXED SEROUS AND ENDOMETRIOID SEROUS ENDOMETRIAL ADENOCARCINOMA
  subtype1                            12                                63
  subtype2                             2                                15
  subtype3                             3                                 0
D4V3, multiclass
D4V4, binary
          cls
clus         0   1
  subtype1  34  97
  subtype2  12  69
  subtype3  38 112
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   34   97
  subtype2   12   69
  subtype3   38  112
     clus
vv    subtype1 subtype2 subtype3
  NO        34       12       38
  YES       97       69      112
          vv
clus        R0  R1  R2  RX
  subtype1  84   8   7   9
  subtype2  51   4   4  10
  subtype3 105   6   1   6
D4V5, multiclass

Clustering(5) Variable = RPPA_CNMF
D5V1, survival
          sevent
clus2       0  1
  subtype1 38  4
  subtype2 33  6
  subtype3 39  1
  subtype4  8  4
  subtype5 39  2
  subtype6 23  3
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
      42       39       40       12       41       26 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
       4        6        1        4        2        3 
$subtype1
TCGA-A5-A0G1 TCGA-A5-A0GE TCGA-A5-A0GQ TCGA-A5-A0GR TCGA-A5-A0R8 TCGA-A5-A0RA 
      106.88       105.37        38.37        36.82        19.56        29.03 
TCGA-A5-A0VP TCGA-AP-A059 TCGA-AP-A05J TCGA-AP-A0LF TCGA-AP-A0LI TCGA-AP-A0LM 
       42.31         8.22        36.89         3.39        97.71        27.12 
TCGA-AX-A05Z TCGA-AX-A064 TCGA-AX-A06D TCGA-AX-A06L TCGA-B5-A0K2 TCGA-B5-A0K4 
       46.45        34.98        12.26        60.62        25.91        17.88 
TCGA-B5-A11I TCGA-B5-A11U TCGA-B5-A11Y TCGA-BG-A0M0 TCGA-BG-A0M2 TCGA-BG-A0MG 
       75.72        16.73        18.38        19.30        20.91        48.56 
TCGA-BK-A0CA TCGA-BK-A0CC TCGA-BK-A139 TCGA-BS-A0T9 TCGA-BS-A0U9 TCGA-D1-A0ZR 
       34.98        10.22        10.16        46.95        67.20         0.56 
TCGA-D1-A101 TCGA-D1-A15X TCGA-D1-A163 TCGA-D1-A16D TCGA-D1-A16E TCGA-D1-A16F 
        1.74        29.88        32.58        37.51        36.79         2.63 
TCGA-D1-A16G TCGA-D1-A16J TCGA-D1-A16X TCGA-D1-A17B TCGA-D1-A17D TCGA-D1-A17N 
       27.42        29.88         3.65         6.97        30.44         1.51 

$subtype2
TCGA-A5-A0G2 TCGA-A5-A0G3 TCGA-A5-A0G5 TCGA-A5-A0GH TCGA-A5-A0GV TCGA-A5-A0GW 
      149.52        46.95        37.02        74.07        20.81        23.21 
TCGA-A5-A0R6 TCGA-A5-A0R7 TCGA-AP-A052 TCGA-AP-A053 TCGA-AP-A054 TCGA-AP-A056 
       19.96        17.56        21.99         5.95        23.31        86.07 
TCGA-AP-A05A TCGA-AP-A05D TCGA-AP-A0LD TCGA-AP-A0LE TCGA-AP-A0LT TCGA-AX-A06B 
       39.39        57.80       117.99       110.37        49.22        53.88 
TCGA-AX-A06F TCGA-AX-A0J0 TCGA-B5-A0JN TCGA-B5-A0JY TCGA-B5-A0K3 TCGA-B5-A11E 
       51.09        40.08        80.38        32.98        23.01         8.71 
TCGA-B5-A11H TCGA-B5-A11X TCGA-BG-A0RY TCGA-BG-A0YV TCGA-BG-A18C TCGA-BS-A0TA 
       88.34        19.56        15.42        12.56        15.45        23.47 
TCGA-BS-A0TJ TCGA-D1-A167 TCGA-D1-A168 TCGA-D1-A16N TCGA-D1-A16S TCGA-D1-A177 
       67.99        15.72        36.10        31.07        18.67        18.02 
TCGA-D1-A179 TCGA-D1-A17K TCGA-D1-A17R 
        6.77        28.08        11.15 

$subtype3
TCGA-A5-A0G9 TCGA-A5-A0GB TCGA-A5-A0GJ TCGA-A5-A0GM TCGA-AX-A05W TCGA-AX-A063 
       83.51        32.78        65.75        60.49        68.32        66.54 
TCGA-AX-A06J TCGA-AX-A0J1 TCGA-B5-A0JZ TCGA-B5-A0K1 TCGA-B5-A11F TCGA-B5-A11N 
       30.02        65.88        28.64        30.51       185.75        43.96 
TCGA-B5-A11Q TCGA-B5-A11S TCGA-B5-A11W TCGA-BG-A0LX TCGA-BG-A0M7 TCGA-BG-A0M9 
       32.05        27.32        19.46        20.15        38.37        28.27 
TCGA-BG-A0MC TCGA-BG-A0MH TCGA-BG-A0MS TCGA-BG-A0MT TCGA-BG-A0W1 TCGA-BG-A0YU 
       41.52        44.09        30.81        21.17        29.82        14.83 
TCGA-BG-A186 TCGA-BG-A18A TCGA-BG-A18B TCGA-BK-A0CB TCGA-BK-A13C TCGA-BS-A0U7 
       13.78        14.01        15.45         6.18        24.99        30.71 
TCGA-BS-A0U8 TCGA-D1-A0ZZ TCGA-D1-A15W TCGA-D1-A160 TCGA-D1-A16O TCGA-D1-A175 
       97.41        22.52        30.08         3.68        33.60         6.64 
TCGA-D1-A17H TCGA-D1-A17L TCGA-D1-A17M TCGA-D1-A17Q 
       28.01        26.37        10.22         1.78 

$subtype4
TCGA-A5-A0GA TCGA-A5-A0GD TCGA-A5-A0GG TCGA-AP-A0LP TCGA-AX-A05S TCGA-AX-A05Y 
       17.85         3.19        87.32        61.64        13.58        72.03 
TCGA-AX-A060 TCGA-BG-A0M4 TCGA-BK-A0C9 TCGA-BS-A0TC TCGA-BS-A0UF TCGA-D1-A16V 
       35.34        34.98        12.69        85.55        85.84         1.41 

$subtype5
TCGA-A5-A0GI TCGA-A5-A0GN TCGA-A5-A0GU TCGA-A5-A0R9 TCGA-A5-A0VQ TCGA-AP-A051 
       57.53        60.53        28.24        24.62        15.95        83.67 
TCGA-AP-A05N TCGA-AP-A05O TCGA-AP-A05P TCGA-AP-A0LG TCGA-AP-A0LJ TCGA-AP-A0LL 
        7.86        12.20        20.91        63.16        31.73        83.97 
TCGA-AP-A0LN TCGA-AP-A0LV TCGA-AX-A05T TCGA-AX-A05U TCGA-AX-A062 TCGA-AX-A0IS 
       82.52        25.08        19.82        29.65        45.96        35.01 
TCGA-B5-A0K0 TCGA-B5-A0K7 TCGA-B5-A11G TCGA-B5-A11V TCGA-B5-A11Z TCGA-B5-A121 
       28.34        17.06       113.33        19.53        17.36        16.57 
TCGA-BG-A0M3 TCGA-BG-A0MU TCGA-BG-A0VT TCGA-BG-A0VV TCGA-BS-A0TI TCGA-BS-A0UJ 
       35.21        20.25         7.36         8.55        61.87        82.39 
TCGA-BS-A0V7 TCGA-D1-A15Z TCGA-D1-A165 TCGA-D1-A16B TCGA-D1-A16Q TCGA-D1-A16Y 
       63.58         1.91         0.66        36.36        10.65        17.49 
TCGA-D1-A176 TCGA-D1-A17C TCGA-D1-A17S TCGA-D1-A17T TCGA-DI-A0WH 
       30.15         0.99        24.30         2.30        16.27 

$subtype6
TCGA-A5-A0GX TCGA-A5-A0VO TCGA-AP-A05H TCGA-AP-A0LH TCGA-AX-A0IW TCGA-AX-A0IZ 
       68.61        11.97        45.53        36.36        37.74        43.82 
TCGA-B5-A0JT TCGA-B5-A0K9 TCGA-BG-A0LW TCGA-BG-A0M6 TCGA-BG-A0M8 TCGA-BG-A187 
       43.13        11.01        18.58         7.92        36.49        14.73 
TCGA-BS-A0TD TCGA-BS-A0TG TCGA-D1-A0ZP TCGA-D1-A0ZU TCGA-D1-A102 TCGA-D1-A103 
       78.18        77.92        29.95        28.67         4.44        21.99 
TCGA-D1-A15V TCGA-D1-A161 TCGA-D1-A162 TCGA-D1-A169 TCGA-D1-A16I TCGA-D1-A16R 
       39.48        29.33        37.64        37.32        11.47         0.69 
TCGA-D1-A17F TCGA-D1-A17U 
        1.28        22.92 

subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
    0.56     5.95     1.78     1.41     0.66     0.69 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
  106.88   149.52   185.75    87.32   113.33    78.18 
subtype1 subtype2 subtype3 subtype4 subtype5 subtype6 
  29.455   28.080   29.920   35.160   24.620   29.640 
[1] "0.6 - 106.9 (29.5)" "6.0 - 149.5 (28.1)" "1.8 - 185.8 (29.9)"
[4] "1.4 - 87.3 (35.2)"  "0.7 - 113.3 (24.6)" "0.7 - 78.2 (29.6)" 
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype4"
  [7] "subtype3" "subtype4" "subtype1" "subtype4" "subtype2" "subtype5"
 [13] "subtype3" "subtype3" "subtype5" "subtype1" "subtype1" "subtype5"
 [19] "subtype2" "subtype2" "subtype6" "subtype2" "subtype2" "subtype1"
 [25] "subtype5" "subtype1" "subtype6" "subtype1" "subtype5" "subtype5"
 [31] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [37] "subtype2" "subtype6" "subtype1" "subtype5" "subtype5" "subtype5"
 [43] "subtype2" "subtype2" "subtype1" "subtype5" "subtype6" "subtype1"
 [49] "subtype5" "subtype5" "subtype1" "subtype5" "subtype4" "subtype2"
 [55] "subtype5" "subtype4" "subtype5" "subtype5" "subtype3" "subtype4"
 [61] "subtype1" "subtype4" "subtype5" "subtype3" "subtype1" "subtype2"
 [67] "subtype1" "subtype2" "subtype3" "subtype1" "subtype5" "subtype6"
 [73] "subtype6" "subtype2" "subtype3" "subtype2" "subtype6" "subtype2"
 [79] "subtype3" "subtype5" "subtype3" "subtype1" "subtype2" "subtype1"
 [85] "subtype5" "subtype6" "subtype2" "subtype3" "subtype5" "subtype2"
 [91] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype5"
 [97] "subtype3" "subtype2" "subtype1" "subtype5" "subtype5" "subtype6"
[103] "subtype3" "subtype1" "subtype1" "subtype5" "subtype4" "subtype6"
[109] "subtype3" "subtype6" "subtype3" "subtype3" "subtype1" "subtype3"
[115] "subtype3" "subtype3" "subtype5" "subtype2" "subtype5" "subtype5"
[121] "subtype3" "subtype3" "subtype2" "subtype3" "subtype6" "subtype3"
[127] "subtype3" "subtype2" "subtype4" "subtype1" "subtype3" "subtype1"
[133] "subtype1" "subtype3" "subtype1" "subtype2" "subtype4" "subtype6"
[139] "subtype6" "subtype5" "subtype2" "subtype3" "subtype3" "subtype1"
[145] "subtype4" "subtype5" "subtype5" "subtype6" "subtype1" "subtype6"
[151] "subtype3" "subtype1" "subtype6" "subtype6" "subtype6" "subtype3"
[157] "subtype1" "subtype5" "subtype3" "subtype6" "subtype6" "subtype1"
[163] "subtype5" "subtype2" "subtype2" "subtype6" "subtype5" "subtype1"
[169] "subtype1" "subtype1" "subtype1" "subtype6" "subtype1" "subtype2"
[175] "subtype3" "subtype5" "subtype6" "subtype2" "subtype4" "subtype1"
[181] "subtype5" "subtype3" "subtype5" "subtype2" "subtype2" "subtype1"
[187] "subtype5" "subtype1" "subtype6" "subtype3" "subtype2" "subtype3"
[193] "subtype3" "subtype1" "subtype3" "subtype2" "subtype5" "subtype5"
[199] "subtype6" "subtype5"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype4"
  [7] "subtype3" "subtype4" "subtype1" "subtype4" "subtype2" "subtype5"
 [13] "subtype3" "subtype3" "subtype5" "subtype1" "subtype1" "subtype5"
 [19] "subtype2" "subtype2" "subtype6" "subtype2" "subtype2" "subtype1"
 [25] "subtype5" "subtype1" "subtype6" "subtype1" "subtype5" "subtype5"
 [31] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [37] "subtype2" "subtype6" "subtype1" "subtype5" "subtype5" "subtype5"
 [43] "subtype2" "subtype2" "subtype1" "subtype5" "subtype6" "subtype1"
 [49] "subtype5" "subtype5" "subtype1" "subtype5" "subtype4" "subtype2"
 [55] "subtype5" "subtype4" "subtype5" "subtype5" "subtype3" "subtype4"
 [61] "subtype1" "subtype4" "subtype5" "subtype3" "subtype1" "subtype2"
 [67] "subtype1" "subtype2" "subtype3" "subtype1" "subtype5" "subtype6"
 [73] "subtype6" "subtype2" "subtype3" "subtype2" "subtype6" "subtype2"
 [79] "subtype3" "subtype5" "subtype3" "subtype1" "subtype2" "subtype1"
 [85] "subtype5" "subtype6" "subtype2" "subtype3" "subtype5" "subtype2"
 [91] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype5"
 [97] "subtype3" "subtype2" "subtype1" "subtype5" "subtype5" "subtype6"
[103] "subtype3" "subtype1" "subtype1" "subtype5" "subtype4" "subtype6"
[109] "subtype3" "subtype6" "subtype3" "subtype3" "subtype1" "subtype3"
[115] "subtype3" "subtype3" "subtype5" "subtype2" "subtype5" "subtype5"
[121] "subtype3" "subtype3" "subtype2" "subtype3" "subtype6" "subtype3"
[127] "subtype3" "subtype2" "subtype4" "subtype1" "subtype3" "subtype1"
[133] "subtype1" "subtype3" "subtype1" "subtype2" "subtype4" "subtype6"
[139] "subtype6" "subtype5" "subtype2" "subtype3" "subtype3" "subtype1"
[145] "subtype4" "subtype5" "subtype5" "subtype6" "subtype1" "subtype6"
[151] "subtype3" "subtype1" "subtype6" "subtype6" "subtype6" "subtype3"
[157] "subtype1" "subtype5" "subtype3" "subtype6" "subtype6" "subtype1"
[163] "subtype5" "subtype2" "subtype2" "subtype6" "subtype5" "subtype1"
[169] "subtype1" "subtype1" "subtype1" "subtype6" "subtype1" "subtype2"
[175] "subtype3" "subtype5" "subtype6" "subtype2" "subtype4" "subtype1"
[181] "subtype5" "subtype3" "subtype5" "subtype2" "subtype2" "subtype1"
[187] "subtype5" "subtype1" "subtype6" "subtype3" "subtype2" "subtype3"
[193] "subtype3" "subtype1" "subtype3" "subtype2" "subtype5" "subtype5"
[199] "subtype6" "subtype5"
  [1] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype4"
  [7] "subtype3" "subtype4" "subtype1" "subtype4" "subtype2" "subtype5"
 [13] "subtype3" "subtype3" "subtype5" "subtype1" "subtype1" "subtype5"
 [19] "subtype2" "subtype2" "subtype6" "subtype2" "subtype2" "subtype1"
 [25] "subtype5" "subtype1" "subtype6" "subtype1" "subtype5" "subtype5"
 [31] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype2"
 [37] "subtype2" "subtype6" "subtype1" "subtype5" "subtype5" "subtype5"
 [43] "subtype2" "subtype2" "subtype1" "subtype5" "subtype6" "subtype1"
 [49] "subtype5" "subtype5" "subtype1" "subtype5" "subtype4" "subtype2"
 [55] "subtype5" "subtype4" "subtype5" "subtype5" "subtype3" "subtype4"
 [61] "subtype1" "subtype4" "subtype5" "subtype3" "subtype1" "subtype2"
 [67] "subtype1" "subtype2" "subtype3" "subtype1" "subtype5" "subtype6"
 [73] "subtype6" "subtype2" "subtype3" "subtype2" "subtype6" "subtype2"
 [79] "subtype3" "subtype5" "subtype3" "subtype1" "subtype2" "subtype1"
 [85] "subtype5" "subtype6" "subtype2" "subtype3" "subtype5" "subtype2"
 [91] "subtype1" "subtype3" "subtype3" "subtype3" "subtype1" "subtype5"
 [97] "subtype3" "subtype2" "subtype1" "subtype5" "subtype5" "subtype6"
[103] "subtype3" "subtype1" "subtype1" "subtype5" "subtype4" "subtype6"
[109] "subtype3" "subtype6" "subtype3" "subtype3" "subtype1" "subtype3"
[115] "subtype3" "subtype3" "subtype5" "subtype2" "subtype5" "subtype5"
[121] "subtype3" "subtype3" "subtype2" "subtype3" "subtype6" "subtype3"
[127] "subtype3" "subtype2" "subtype4" "subtype1" "subtype3" "subtype1"
[133] "subtype1" "subtype3" "subtype1" "subtype2" "subtype4" "subtype6"
[139] "subtype6" "subtype5" "subtype2" "subtype3" "subtype3" "subtype1"
[145] "subtype4" "subtype5" "subtype5" "subtype6" "subtype1" "subtype6"
[151] "subtype3" "subtype1" "subtype6" "subtype6" "subtype6" "subtype3"
[157] "subtype1" "subtype5" "subtype3" "subtype6" "subtype6" "subtype1"
[163] "subtype5" "subtype2" "subtype2" "subtype6" "subtype5" "subtype1"
[169] "subtype1" "subtype1" "subtype1" "subtype6" "subtype1" "subtype2"
[175] "subtype3" "subtype5" "subtype6" "subtype2" "subtype4" "subtype1"
[181] "subtype5" "subtype3" "subtype5" "subtype2" "subtype2" "subtype1"
[187] "subtype5" "subtype1" "subtype6" "subtype3" "subtype2" "subtype3"
[193] "subtype3" "subtype1" "subtype3" "subtype2" "subtype5" "subtype5"
[199] "subtype6" "subtype5"
D5V2, continuous
          vv
clus       ENDOMETRIOID ENDOMETRIAL ADENOCARCINOMA
  subtype1                                      35
  subtype2                                      28
  subtype3                                      39
  subtype4                                      12
  subtype5                                      41
  subtype6                                      19
          vv
clus       MIXED SEROUS AND ENDOMETRIOID SEROUS ENDOMETRIAL ADENOCARCINOMA
  subtype1                             1                                 6
  subtype2                             0                                11
  subtype3                             1                                 0
  subtype4                             0                                 0
  subtype5                             0                                 0
  subtype6                             1                                 6
D5V3, multiclass
D5V4, binary
          cls
clus        0  1
  subtype1 20 22
  subtype2 19 20
  subtype3 13 27
  subtype4  4  8
  subtype5 13 28
  subtype6 11 15
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   20   22
  subtype2   19   20
  subtype3   13   27
  subtype4    4    8
  subtype5   13   28
  subtype6   11   15
          vv
clus       R0 R1 R2 RX
  subtype1 24  3  3  6
  subtype2 29  1  1  2
  subtype3 26  0  0  5
  subtype4 10  1  1  0
  subtype5 30  4  0  1
  subtype6 22  0  0  2
D5V5, multiclass

Clustering(6) Variable = RPPA_CHIERARCHICAL
D6V1, survival
          sevent
clus2        0   1
  subtype1 115   9
  subtype2  65  11
subtype1 subtype2 
     124       76 
subtype1 subtype2 
       9       11 
$subtype1
TCGA-A5-A0G9 TCGA-A5-A0GA TCGA-A5-A0GB TCGA-A5-A0GD TCGA-A5-A0GG TCGA-A5-A0GI 
       83.51        17.85        32.78         3.19        87.32        57.53 
TCGA-A5-A0GJ TCGA-A5-A0GM TCGA-A5-A0GN TCGA-A5-A0GR TCGA-A5-A0GU TCGA-A5-A0GX 
       65.75        60.49        60.53        36.82        28.24        68.61 
TCGA-A5-A0R9 TCGA-A5-A0RA TCGA-A5-A0VO TCGA-A5-A0VQ TCGA-AP-A051 TCGA-AP-A05D 
       24.62        29.03        11.97        15.95        83.67        57.80 
TCGA-AP-A05H TCGA-AP-A05N TCGA-AP-A05O TCGA-AP-A05P TCGA-AP-A0LE TCGA-AP-A0LG 
       45.53         7.86        12.20        20.91       110.37        63.16 
TCGA-AP-A0LH TCGA-AP-A0LJ TCGA-AP-A0LL TCGA-AP-A0LN TCGA-AP-A0LP TCGA-AP-A0LV 
       36.36        31.73        83.97        82.52        61.64        25.08 
TCGA-AX-A05T TCGA-AX-A05U TCGA-AX-A05W TCGA-AX-A05Y TCGA-AX-A05Z TCGA-AX-A060 
       19.82        29.65        68.32        72.03        46.45        35.34 
TCGA-AX-A062 TCGA-AX-A063 TCGA-AX-A06B TCGA-AX-A06J TCGA-AX-A0IS TCGA-AX-A0IW 
       45.96        66.54        53.88        30.02        35.01        37.74 
TCGA-AX-A0IZ TCGA-AX-A0J1 TCGA-B5-A0JT TCGA-B5-A0JZ TCGA-B5-A0K0 TCGA-B5-A0K1 
       43.82        65.88        43.13        28.64        28.34        30.51 
TCGA-B5-A0K2 TCGA-B5-A0K4 TCGA-B5-A0K9 TCGA-B5-A11F TCGA-B5-A11G TCGA-B5-A11N 
       25.91        17.88        11.01       185.75       113.33        43.96 
TCGA-B5-A11Q TCGA-B5-A11S TCGA-B5-A11V TCGA-B5-A11W TCGA-B5-A11Z TCGA-B5-A121 
       32.05        27.32        19.53        19.46        17.36        16.57 
TCGA-BG-A0LW TCGA-BG-A0LX TCGA-BG-A0M2 TCGA-BG-A0M3 TCGA-BG-A0M4 TCGA-BG-A0M7 
       18.58        20.15        20.91        35.21        34.98        38.37 
TCGA-BG-A0M8 TCGA-BG-A0M9 TCGA-BG-A0MC TCGA-BG-A0MH TCGA-BG-A0MS TCGA-BG-A0MT 
       36.49        28.27        41.52        44.09        30.81        21.17 
TCGA-BG-A0MU TCGA-BG-A0RY TCGA-BG-A0VT TCGA-BG-A0VV TCGA-BG-A0W1 TCGA-BG-A0YU 
       20.25        15.42         7.36         8.55        29.82        14.83 
TCGA-BG-A186 TCGA-BG-A187 TCGA-BG-A18A TCGA-BG-A18B TCGA-BK-A0C9 TCGA-BK-A0CB 
       13.78        14.73        14.01        15.45        12.69         6.18 
TCGA-BK-A13C TCGA-BS-A0TC TCGA-BS-A0TD TCGA-BS-A0TG TCGA-BS-A0TI TCGA-BS-A0U7 
       24.99        85.55        78.18        77.92        61.87        30.71 
TCGA-BS-A0U8 TCGA-BS-A0UF TCGA-BS-A0UJ TCGA-BS-A0V7 TCGA-D1-A0ZP TCGA-D1-A0ZU 
       97.41        85.84        82.39        63.58        29.95        28.67 
TCGA-D1-A0ZZ TCGA-D1-A102 TCGA-D1-A103 TCGA-D1-A15V TCGA-D1-A15Z TCGA-D1-A160 
       22.52         4.44        21.99        39.48         1.91         3.68 
TCGA-D1-A161 TCGA-D1-A162 TCGA-D1-A165 TCGA-D1-A167 TCGA-D1-A169 TCGA-D1-A16B 
       29.33        37.64         0.66        15.72        37.32        36.36 
TCGA-D1-A16I TCGA-D1-A16N TCGA-D1-A16O TCGA-D1-A16R TCGA-D1-A16V TCGA-D1-A175 
       11.47        31.07        33.60         0.69         1.41         6.64 
TCGA-D1-A17D TCGA-D1-A17F TCGA-D1-A17H TCGA-D1-A17K TCGA-D1-A17L TCGA-D1-A17M 
       30.44         1.28        28.01        28.08        26.37        10.22 
TCGA-D1-A17Q TCGA-D1-A17R TCGA-D1-A17U TCGA-DI-A0WH 
        1.78        11.15        22.92        16.27 

$subtype2
TCGA-A5-A0G1 TCGA-A5-A0G2 TCGA-A5-A0G3 TCGA-A5-A0G5 TCGA-A5-A0GE TCGA-A5-A0GH 
      106.88       149.52        46.95        37.02       105.37        74.07 
TCGA-A5-A0GQ TCGA-A5-A0GV TCGA-A5-A0GW TCGA-A5-A0R6 TCGA-A5-A0R7 TCGA-A5-A0R8 
       38.37        20.81        23.21        19.96        17.56        19.56 
TCGA-A5-A0VP TCGA-AP-A052 TCGA-AP-A053 TCGA-AP-A054 TCGA-AP-A056 TCGA-AP-A059 
       42.31        21.99         5.95        23.31        86.07         8.22 
TCGA-AP-A05A TCGA-AP-A05J TCGA-AP-A0LD TCGA-AP-A0LF TCGA-AP-A0LI TCGA-AP-A0LM 
       39.39        36.89       117.99         3.39        97.71        27.12 
TCGA-AP-A0LT TCGA-AX-A05S TCGA-AX-A064 TCGA-AX-A06D TCGA-AX-A06F TCGA-AX-A06L 
       49.22        13.58        34.98        12.26        51.09        60.62 
TCGA-AX-A0J0 TCGA-B5-A0JN TCGA-B5-A0JY TCGA-B5-A0K3 TCGA-B5-A0K7 TCGA-B5-A11E 
       40.08        80.38        32.98        23.01        17.06         8.71 
TCGA-B5-A11H TCGA-B5-A11I TCGA-B5-A11U TCGA-B5-A11X TCGA-B5-A11Y TCGA-BG-A0M0 
       88.34        75.72        16.73        19.56        18.38        19.30 
TCGA-BG-A0M6 TCGA-BG-A0MG TCGA-BG-A0YV TCGA-BG-A18C TCGA-BK-A0CA TCGA-BK-A0CC 
        7.92        48.56        12.56        15.45        34.98        10.22 
TCGA-BK-A139 TCGA-BS-A0T9 TCGA-BS-A0TA TCGA-BS-A0TJ TCGA-BS-A0U9 TCGA-D1-A0ZR 
       10.16        46.95        23.47        67.99        67.20         0.56 
TCGA-D1-A101 TCGA-D1-A15W TCGA-D1-A15X TCGA-D1-A163 TCGA-D1-A168 TCGA-D1-A16D 
        1.74        30.08        29.88        32.58        36.10        37.51 
TCGA-D1-A16E TCGA-D1-A16F TCGA-D1-A16G TCGA-D1-A16J TCGA-D1-A16Q TCGA-D1-A16S 
       36.79         2.63        27.42        29.88        10.65        18.67 
TCGA-D1-A16X TCGA-D1-A16Y TCGA-D1-A176 TCGA-D1-A177 TCGA-D1-A179 TCGA-D1-A17B 
        3.65        17.49        30.15        18.02         6.77         6.97 
TCGA-D1-A17C TCGA-D1-A17N TCGA-D1-A17S TCGA-D1-A17T 
        0.99         1.51        24.30         2.30 

subtype1 subtype2 
    0.66     0.56 
subtype1 subtype2 
  185.75   149.52 
subtype1 subtype2 
  29.735   23.885 
[1] "0.7 - 185.8 (29.7)" "0.6 - 149.5 (23.9)"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
  [7] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
 [13] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [19] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [25] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [31] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [37] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [43] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [49] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [55] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [61] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [67] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
 [73] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
 [79] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [85] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [91] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [97] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[103] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[109] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[115] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[121] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[127] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[133] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[139] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[151] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[157] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[163] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[169] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[175] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[181] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[187] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[193] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[199] "subtype1" "subtype1"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
  [7] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
 [13] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [19] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [25] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [31] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [37] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [43] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [49] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [55] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [61] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [67] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
 [73] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
 [79] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [85] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [91] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [97] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[103] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[109] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[115] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[121] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[127] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[133] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[139] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[151] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[157] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[163] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[169] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[175] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[181] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[187] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[193] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[199] "subtype1" "subtype1"
  [1] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
  [7] "subtype1" "subtype1" "subtype2" "subtype1" "subtype2" "subtype1"
 [13] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [19] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype2"
 [25] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
 [31] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
 [37] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
 [43] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [49] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [55] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [61] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [67] "subtype2" "subtype2" "subtype1" "subtype2" "subtype1" "subtype1"
 [73] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
 [79] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [85] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
 [91] "subtype2" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
 [97] "subtype1" "subtype2" "subtype2" "subtype1" "subtype1" "subtype1"
[103] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[109] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[115] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[121] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype1"
[127] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[133] "subtype2" "subtype1" "subtype2" "subtype2" "subtype1" "subtype1"
[139] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype2" "subtype1"
[151] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype2"
[157] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[163] "subtype1" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[169] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[175] "subtype1" "subtype2" "subtype1" "subtype2" "subtype1" "subtype2"
[181] "subtype2" "subtype1" "subtype2" "subtype2" "subtype2" "subtype2"
[187] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[193] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
[199] "subtype1" "subtype1"
[1] "hr=" "2.1"
D6V2, continuous
          vv
clus       ENDOMETRIOID ENDOMETRIAL ADENOCARCINOMA
  subtype1                                     116
  subtype2                                      58
          vv
clus       MIXED SEROUS AND ENDOMETRIOID SEROUS ENDOMETRIAL ADENOCARCINOMA
  subtype1                             2                                 6
  subtype2                             1                                17
D6V3, multiclass
D6V4, binary
          cls
clus        0  1
  subtype1 47 77
  subtype2 33 43
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   47   77
  subtype2   33   43
     clus
vv    subtype1 subtype2
  NO        47       33
  YES       77       43
          vv
clus       R0 R1 R2 RX
  subtype1 94  6  0  6
  subtype2 47  3  5 10
D6V5, multiclass

Clustering(7) Variable = MRNASEQ_CNMF
D7V1, survival
          sevent
clus2       0  1
  subtype1 32  6
  subtype2 21  3
  subtype3 18  3
subtype1 subtype2 subtype3 
      38       24       21 
subtype1 subtype2 subtype3 
       6        3        3 
$subtype1
TCGA-A5-A1OH TCGA-A5-A2K4 TCGA-A5-A3LP TCGA-AJ-A23N TCGA-AJ-A2QM TCGA-AJ-A3BD 
       36.30        28.64        14.96         1.08         1.02         0.49 
TCGA-AJ-A3BF TCGA-AJ-A3EJ TCGA-AJ-A3EL TCGA-AJ-A3EM TCGA-AJ-A3IA TCGA-AJ-A3NF 
        1.12         1.64         2.14         1.64         0.92         1.35 
TCGA-AJ-A3NH TCGA-AJ-A3QS TCGA-AJ-A3TW TCGA-AP-A3K1 TCGA-AX-A2IN TCGA-AX-A3FS 
        0.76         1.84         1.68        18.25        31.10         0.23 
TCGA-AX-A3FZ TCGA-AX-A3G3 TCGA-AX-A3GI TCGA-B5-A1MS TCGA-B5-A3S1 TCGA-BG-A3PP 
        0.20         0.03         0.13       102.05         5.00         6.81 
TCGA-BK-A4ZD TCGA-D1-A3DG TCGA-D1-A3DH TCGA-DI-A2QY TCGA-EO-A3AS TCGA-EY-A2ON 
        6.94         4.27         4.11        91.96        34.39        13.45 
TCGA-EY-A2OQ TCGA-EY-A3L3 TCGA-EY-A4KR TCGA-EY-A547 TCGA-EY-A54A TCGA-K6-A3WQ 
       29.06         8.48         6.44        17.88         3.72         6.67 
TCGA-KJ-A3U4 TCGA-PG-A5BC 
        2.40        10.82 

$subtype2
TCGA-A5-A2K2 TCGA-A5-A2K7 TCGA-A5-A3LO TCGA-AJ-A3BG TCGA-AJ-A3EK TCGA-AJ-A3NE 
       91.00         5.13         7.33         1.02         2.10         2.56 
TCGA-AJ-A3OJ TCGA-AX-A2H4 TCGA-AX-A3FT TCGA-AX-A3G8 TCGA-AX-A3G9 TCGA-B5-A3FC 
        1.94        30.08         0.10         1.18         8.35        62.14 
TCGA-BG-A3EW TCGA-BK-A13B TCGA-D1-A3DA TCGA-DI-A2QT TCGA-E6-A2P8 TCGA-EO-A22U 
       11.31        31.76         0.26        12.39         2.37        27.12 
TCGA-EO-A22X TCGA-EO-A3AU TCGA-EO-A3AY TCGA-EY-A2OO TCGA-EY-A2OP TCGA-EY-A3QX 
       32.25        19.36        12.89        45.76        31.00        13.84 

$subtype3
TCGA-A5-A2K5 TCGA-AJ-A3BI TCGA-AJ-A3BK TCGA-AJ-A3I9 TCGA-AJ-A3NC TCGA-AJ-A3NG 
        5.29         2.01         1.68         1.28         6.90         1.71 
TCGA-AJ-A3OK TCGA-AJ-A3OL TCGA-AX-A3FW TCGA-AX-A3FX TCGA-AX-A3G1 TCGA-AX-A3G4 
        4.67         1.87         0.33         0.13        20.52         0.13 
TCGA-AX-A3G7 TCGA-AX-A3GB TCGA-BG-A0MK TCGA-BK-A56F TCGA-E6-A2P9 TCGA-EO-A22Y 
        0.23        14.47        43.30         6.58         6.64        25.02 
TCGA-EY-A548 TCGA-EY-A549 TCGA-FI-A3PV 
        2.14         6.97        41.06 

subtype1 subtype2 subtype3 
    0.03     0.10     0.13 
subtype1 subtype2 subtype3 
  102.05    91.00    43.30 
subtype1 subtype2 subtype3 
    4.19    11.85     4.67 
[1] "0.0 - 102.0 (4.2)" "0.1 - 91.0 (11.9)" "0.1 - 43.3 (4.7)" 
 [1] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
 [7] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[13] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[19] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[25] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[31] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[37] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[43] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype2"
[49] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[55] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[61] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[67] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[73] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[79] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
 [1] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
 [7] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[13] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[19] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[25] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[31] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[37] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[43] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype2"
[49] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[55] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[61] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[67] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[73] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[79] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
 [1] "subtype1" "subtype2" "subtype1" "subtype3" "subtype2" "subtype2"
 [7] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[13] "subtype3" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[19] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[25] "subtype1" "subtype2" "subtype3" "subtype3" "subtype1" "subtype1"
[31] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[37] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype3"
[43] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype2"
[49] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[55] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[61] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype1"
[67] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype1"
[73] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[79] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
D7V2, continuous
          vv
clus       ENDOMETRIOID ENDOMETRIAL ADENOCARCINOMA
  subtype1                                      12
  subtype2                                      18
  subtype3                                      16
          vv
clus       MIXED SEROUS AND ENDOMETRIOID SEROUS ENDOMETRIAL ADENOCARCINOMA
  subtype1                             1                                26
  subtype2                             3                                 4
  subtype3                             1                                 4
D7V3, multiclass
D7V4, binary
          cls
clus        0  1
  subtype1  1 38
  subtype2  4 21
  subtype3  1 20
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    1   38
  subtype2    4   21
  subtype3    1   20
     clus
vv    subtype1 subtype2 subtype3
  NO         1        4        1
  YES       38       21       20
          vv
clus       R0 R1 R2 RX
  subtype1 22  1  2  3
  subtype2 15  1  2  0
  subtype3 15  0  0  1
D7V5, multiclass

Clustering(8) Variable = MRNASEQ_CHIERARCHICAL
D8V1, survival
          sevent
clus2       0  1
  subtype1 28  6
  subtype2 22  4
  subtype3 21  2
subtype1 subtype2 subtype3 
      34       26       23 
subtype1 subtype2 subtype3 
       6        4        2 
$subtype1
TCGA-A5-A1OH TCGA-A5-A3LP TCGA-AJ-A23N TCGA-AJ-A2QM TCGA-AJ-A3BF TCGA-AJ-A3EJ 
       36.30        14.96         1.08         1.02         1.12         1.64 
TCGA-AJ-A3EM TCGA-AJ-A3IA TCGA-AJ-A3NF TCGA-AJ-A3NH TCGA-AJ-A3TW TCGA-AX-A2IN 
        1.64         0.92         1.35         0.76         1.68        31.10 
TCGA-AX-A3FS TCGA-AX-A3FZ TCGA-AX-A3G3 TCGA-AX-A3G7 TCGA-AX-A3GI TCGA-B5-A1MS 
        0.23         0.20         0.03         0.23         0.13       102.05 
TCGA-B5-A3S1 TCGA-BG-A3PP TCGA-D1-A3DG TCGA-D1-A3DH TCGA-DI-A2QY TCGA-E6-A2P8 
        5.00         6.81         4.27         4.11        91.96         2.37 
TCGA-EO-A22X TCGA-EO-A3AS TCGA-EY-A2OQ TCGA-EY-A3L3 TCGA-EY-A4KR TCGA-EY-A547 
       32.25        34.39        29.06         8.48         6.44        17.88 
TCGA-FI-A3PV TCGA-K6-A3WQ TCGA-KJ-A3U4 TCGA-PG-A5BC 
       41.06         6.67         2.40        10.82 

$subtype2
TCGA-A5-A2K2 TCGA-A5-A2K4 TCGA-A5-A2K7 TCGA-A5-A3LO TCGA-AJ-A3BD TCGA-AJ-A3BG 
       91.00        28.64         5.13         7.33         0.49         1.02 
TCGA-AJ-A3EK TCGA-AJ-A3NE TCGA-AJ-A3OJ TCGA-AJ-A3QS TCGA-AP-A3K1 TCGA-AX-A2H4 
        2.10         2.56         1.94         1.84        18.25        30.08 
TCGA-AX-A3FT TCGA-AX-A3G8 TCGA-AX-A3G9 TCGA-BG-A3EW TCGA-BK-A13B TCGA-D1-A3DA 
        0.10         1.18         8.35        11.31        31.76         0.26 
TCGA-DI-A2QT TCGA-EO-A3AU TCGA-EO-A3AY TCGA-EY-A2ON TCGA-EY-A2OO TCGA-EY-A2OP 
       12.39        19.36        12.89        13.45        45.76        31.00 
TCGA-EY-A3QX TCGA-EY-A54A 
       13.84         3.72 

$subtype3
TCGA-A5-A2K5 TCGA-AJ-A3BI TCGA-AJ-A3BK TCGA-AJ-A3EL TCGA-AJ-A3I9 TCGA-AJ-A3NC 
        5.29         2.01         1.68         2.14         1.28         6.90 
TCGA-AJ-A3NG TCGA-AJ-A3OK TCGA-AJ-A3OL TCGA-AX-A3FW TCGA-AX-A3FX TCGA-AX-A3G1 
        1.71         4.67         1.87         0.33         0.13        20.52 
TCGA-AX-A3G4 TCGA-AX-A3GB TCGA-B5-A3FC TCGA-BG-A0MK TCGA-BK-A4ZD TCGA-BK-A56F 
        0.13        14.47        62.14        43.30         6.94         6.58 
TCGA-E6-A2P9 TCGA-EO-A22U TCGA-EO-A22Y TCGA-EY-A548 TCGA-EY-A549 
        6.64        27.12        25.02         2.14         6.97 

subtype1 subtype2 subtype3 
    0.03     0.10     0.13 
subtype1 subtype2 subtype3 
  102.05    91.00    62.14 
subtype1 subtype2 subtype3 
    4.19     9.83     5.29 
[1] "0.0 - 102.0 (4.2)" "0.1 - 91.0 (9.8)"  "0.1 - 62.1 (5.3)" 
 [1] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [7] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[13] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[19] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[25] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
[31] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[37] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[43] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[49] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[55] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[61] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[67] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[73] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[79] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [1] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [7] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[13] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[19] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[25] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
[31] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[37] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[43] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[49] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[55] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[61] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[67] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[73] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[79] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
 [1] "subtype1" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
 [7] "subtype1" "subtype1" "subtype1" "subtype2" "subtype1" "subtype2"
[13] "subtype3" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
[19] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype3"
[25] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype1"
[31] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
[37] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype1"
[43] "subtype2" "subtype2" "subtype3" "subtype1" "subtype1" "subtype3"
[49] "subtype1" "subtype3" "subtype2" "subtype1" "subtype2" "subtype3"
[55] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype1"
[61] "subtype1" "subtype3" "subtype3" "subtype1" "subtype3" "subtype1"
[67] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[73] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype3"
[79] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
D8V2, continuous
          vv
clus       ENDOMETRIOID ENDOMETRIAL ADENOCARCINOMA
  subtype1                                      10
  subtype2                                      16
  subtype3                                      20
          vv
clus       MIXED SEROUS AND ENDOMETRIOID SEROUS ENDOMETRIAL ADENOCARCINOMA
  subtype1                             2                                23
  subtype2                             2                                 9
  subtype3                             1                                 2
D8V3, multiclass
D8V4, binary
          cls
clus        0  1
  subtype1  1 34
  subtype2  4 23
  subtype3  1 22
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1    1   34
  subtype2    4   23
  subtype3    1   22
     clus
vv    subtype1 subtype2 subtype3
  NO         1        4        1
  YES       34       23       22
          vv
clus       R0 R1 R2 RX
  subtype1 19  0  1  2
  subtype2 16  2  3  1
  subtype3 17  0  0  1
D8V5, multiclass

Clustering(9) Variable = MIRSEQ_CNMF
D9V1, survival
          sevent
clus2        0   1
  subtype1 107  22
  subtype2 123   5
  subtype3  40   4
  subtype4  44   9
  subtype5  99  13
subtype1 subtype2 subtype3 subtype4 subtype5 
     129      128       44       53      112 
subtype1 subtype2 subtype3 subtype4 subtype5 
      22        5        4        9       13 
$subtype1
TCGA-A5-A0G1 TCGA-A5-A0G3 TCGA-A5-A0GH TCGA-A5-A0GR TCGA-A5-A1OG TCGA-A5-A1OH 
      106.88        46.95        74.07        36.82        11.44        36.30 
TCGA-A5-A2K2 TCGA-A5-A2K3 TCGA-A5-A2K4 TCGA-A5-A3LO TCGA-A5-A3LP TCGA-AJ-A23M 
       91.00        46.32        28.64         7.33        14.96         1.02 
TCGA-AJ-A23N TCGA-AJ-A2QM TCGA-AJ-A2QO TCGA-AJ-A3BD TCGA-AJ-A3BF TCGA-AJ-A3EM 
        1.08         1.02         2.99         0.49         1.12         1.64 
TCGA-AJ-A3NG TCGA-AJ-A3OL TCGA-AJ-A3TW TCGA-AP-A053 TCGA-AP-A0L9 TCGA-AP-A0LF 
        1.71         1.87         1.68         5.95       125.39         3.39 
TCGA-AP-A1E4 TCGA-AP-A3K1 TCGA-AX-A06B TCGA-AX-A06D TCGA-AX-A0IU TCGA-AX-A0IW 
       16.24        18.25        53.88        12.26        28.54        37.74 
TCGA-AX-A1C5 TCGA-AX-A1C7 TCGA-AX-A1C8 TCGA-AX-A1CF TCGA-AX-A1CP TCGA-AX-A1CR 
       19.20        16.93        13.55        76.83        36.39        11.08 
TCGA-AX-A2H2 TCGA-AX-A2H4 TCGA-AX-A2H5 TCGA-AX-A2H8 TCGA-AX-A2HD TCGA-AX-A2HF 
        4.77        30.08        71.24        61.18        40.50        16.08 
TCGA-AX-A2HG TCGA-AX-A2HH TCGA-AX-A2HK TCGA-AX-A2IN TCGA-AX-A2IO TCGA-AX-A3FS 
       21.70        17.72         2.96        31.10        38.66         0.23 
TCGA-AX-A3FT TCGA-AX-A3G1 TCGA-AX-A3G3 TCGA-AX-A3G4 TCGA-AX-A3G7 TCGA-AX-A3GI 
        0.10        20.52         0.03         0.13         0.23         0.13 
TCGA-B5-A0K4 TCGA-B5-A0K8 TCGA-B5-A11E TCGA-B5-A11H TCGA-B5-A11I TCGA-B5-A1MS 
       17.88        17.82         8.71        88.34        75.72       102.05 
TCGA-B5-A1MW TCGA-B5-A1MY TCGA-B5-A3S1 TCGA-BG-A0M6 TCGA-BG-A0MT TCGA-BG-A0YV 
       14.70        11.87         5.00         7.92        21.17        12.56 
TCGA-BG-A221 TCGA-BG-A2AE TCGA-BG-A3EW TCGA-BG-A3PP TCGA-BK-A0CC TCGA-BK-A139 
        1.81         0.53        11.31         6.81        10.22        10.16 
TCGA-BK-A26L TCGA-BK-A4ZD TCGA-BS-A0U9 TCGA-D1-A0ZP TCGA-D1-A0ZZ TCGA-D1-A15V 
       24.13         6.94        67.20        29.95        22.52        39.48 
TCGA-D1-A15X TCGA-D1-A16I TCGA-D1-A16N TCGA-D1-A16S TCGA-D1-A16Y TCGA-D1-A17K 
       29.88        11.47        31.07        18.67        17.49        28.08 
TCGA-D1-A1NU TCGA-D1-A1NW TCGA-D1-A2G0 TCGA-D1-A2G7 TCGA-D1-A3DA TCGA-D1-A3DG 
       13.22         0.72         3.52        44.88         0.26         4.27 
TCGA-D1-A3DH TCGA-DI-A1NO TCGA-DI-A2QT TCGA-DI-A2QY TCGA-E6-A1LZ TCGA-E6-A2P8 
        4.11         9.37        12.39        91.96        48.36         2.37 
TCGA-EO-A1Y8 TCGA-EO-A2CH TCGA-EO-A3AS TCGA-EO-A3AY TCGA-EY-A1G7 TCGA-EY-A1GC 
       10.78        19.40        34.39        12.89         6.21         4.54 
TCGA-EY-A1GJ TCGA-EY-A1GO TCGA-EY-A1GS TCGA-EY-A1GT TCGA-EY-A1GV TCGA-EY-A210 
       23.90        19.27        15.09        16.11        15.81        12.59 
TCGA-EY-A212 TCGA-EY-A214 TCGA-EY-A2OM TCGA-EY-A2ON TCGA-EY-A2OP TCGA-EY-A2OQ 
        3.58        14.40        22.82        13.45        31.00        29.06 
TCGA-EY-A3L3 TCGA-EY-A4KR TCGA-EY-A547 TCGA-FI-A2D2 TCGA-FI-A2D6 TCGA-FI-A2EU 
        8.48         6.44        17.88        36.00         8.98        97.08 
TCGA-FI-A2EW TCGA-FI-A2EX TCGA-FI-A2EY TCGA-FI-A2F8 TCGA-FI-A3PV TCGA-H5-A2HR 
       59.01         9.07        29.03        25.02        41.06         1.74 
TCGA-K6-A3WQ TCGA-KJ-A3U4 TCGA-PG-A5BC 
        6.67         2.40        10.82 

$subtype2
TCGA-A5-A0G9 TCGA-A5-A0GB TCGA-A5-A0GE TCGA-A5-A0GJ TCGA-A5-A0GQ TCGA-A5-A0R9 
       83.51        32.78       105.37        65.75        38.37        24.62 
TCGA-A5-A0RA TCGA-A5-A0VP TCGA-A5-A1OJ TCGA-AJ-A2QK TCGA-AJ-A2QL TCGA-AJ-A3BI 
       29.03        42.31         9.60         0.39        19.79         2.01 
TCGA-AJ-A3BK TCGA-AJ-A3I9 TCGA-AJ-A3NC TCGA-AJ-A3OK TCGA-AP-A05O TCGA-AP-A0LJ 
        1.68         1.28         6.90         4.67        12.20        31.73 
TCGA-AP-A0LP TCGA-AP-A0LS TCGA-AP-A1DK TCGA-AP-A1DP TCGA-AX-A05T TCGA-AX-A05Y 
       61.64        63.06        60.36        35.54        19.82        72.03 
TCGA-AX-A06J TCGA-AX-A06L TCGA-AX-A1C9 TCGA-AX-A1CE TCGA-AX-A1CJ TCGA-AX-A2H7 
       30.02        60.62        15.25        20.05        54.08        33.53 
TCGA-AX-A2HJ TCGA-AX-A3FW TCGA-AX-A3FX TCGA-AX-A3GB TCGA-B5-A0JR TCGA-B5-A0JS 
       27.32         0.33         0.13        14.47        56.91        46.75 
TCGA-B5-A0JT TCGA-B5-A0JX TCGA-B5-A0K1 TCGA-B5-A0K2 TCGA-B5-A0KB TCGA-B5-A11G 
       43.13        44.71        30.51        25.91         4.08       113.33 
TCGA-B5-A11J TCGA-B5-A11M TCGA-B5-A11O TCGA-B5-A11P TCGA-B5-A11Q TCGA-B5-A11R 
       54.44        44.75        40.93        36.82        32.05        33.50 
TCGA-B5-A11S TCGA-B5-A11W TCGA-B5-A121 TCGA-B5-A1MV TCGA-BG-A0M0 TCGA-BG-A0M2 
       27.32        19.46        16.57        14.40        19.30        20.91 
TCGA-BG-A0M7 TCGA-BG-A0M9 TCGA-BG-A0MA TCGA-BG-A0MC TCGA-BG-A0MH TCGA-BG-A0MK 
       38.37        28.27        10.72        41.52        44.09        43.30 
TCGA-BG-A0VV TCGA-BG-A0VW TCGA-BG-A0VZ TCGA-BG-A0W1 TCGA-BG-A0YU TCGA-BG-A187 
        8.55         4.31        28.54        29.82        14.83        14.73 
TCGA-BG-A18A TCGA-BG-A18B TCGA-BG-A2L7 TCGA-BK-A0C9 TCGA-BK-A0CA TCGA-BK-A13C 
       14.01        15.45         5.82        12.69        34.98        24.99 
TCGA-BK-A56F TCGA-BS-A0TC TCGA-BS-A0TD TCGA-BS-A0UJ TCGA-BS-A0UM TCGA-BS-A0V6 
        6.58        85.55        78.18        82.39        86.89        62.79 
TCGA-D1-A0ZO TCGA-D1-A0ZR TCGA-D1-A0ZV TCGA-D1-A15W TCGA-D1-A161 TCGA-D1-A162 
       19.79         0.56        23.93        30.08        29.33        37.64 
TCGA-D1-A165 TCGA-D1-A169 TCGA-D1-A16B TCGA-D1-A16D TCGA-D1-A16E TCGA-D1-A16F 
        0.66        37.32        36.36        37.51        36.79         2.63 
TCGA-D1-A16O TCGA-D1-A16Q TCGA-D1-A16V TCGA-D1-A16X TCGA-D1-A176 TCGA-D1-A17A 
       33.60        10.65         1.41         3.65        30.15         1.58 
TCGA-D1-A17B TCGA-D1-A17D TCGA-D1-A17F TCGA-D1-A17L TCGA-D1-A17N TCGA-D1-A17Q 
        6.97        30.44         1.28        26.37         1.51         1.78 
TCGA-D1-A17S TCGA-D1-A17T TCGA-D1-A17U TCGA-D1-A1NS TCGA-D1-A1NX TCGA-D1-A1NZ 
       24.30         2.30        22.92         1.41        18.25        18.02 
TCGA-D1-A1O0 TCGA-D1-A1O5 TCGA-D1-A1O7 TCGA-D1-A2G5 TCGA-DI-A1BY TCGA-E6-A2P9 
        2.07        15.06         1.05        41.42        36.62         6.64 
TCGA-EC-A1NJ TCGA-EC-A24G TCGA-EO-A1Y7 TCGA-EO-A22Y TCGA-EY-A1GE TCGA-EY-A1GF 
       16.01        16.77         7.99        25.02        24.36        27.16 
TCGA-EY-A1GH TCGA-EY-A1GK TCGA-EY-A1GM TCGA-EY-A1GW TCGA-EY-A1GX TCGA-EY-A1H0 
       23.31        22.78         6.87         8.55         6.48        19.33 
TCGA-EY-A549 TCGA-FI-A2F4 
        6.97        28.93 

$subtype3
TCGA-A5-A0GG TCGA-A5-A0R6 TCGA-A5-A0R8 TCGA-AJ-A3EL TCGA-AJ-A3IA TCGA-AJ-A3NF 
       87.32        19.96        19.56         2.14         0.92         1.35 
TCGA-AJ-A3OJ TCGA-AJ-A3QS TCGA-AP-A059 TCGA-AP-A05P TCGA-AP-A0LM TCGA-AP-A1DQ 
        1.94         1.84         8.22        20.91        27.12        41.92 
TCGA-AP-A1E3 TCGA-AX-A064 TCGA-AX-A06H TCGA-AX-A0IZ TCGA-AX-A1CA TCGA-AX-A1CC 
       27.85        34.98        27.39        43.82        20.28        12.43 
TCGA-B5-A11L TCGA-B5-A1MU TCGA-B5-A1N2 TCGA-BS-A0UA TCGA-BS-A0UL TCGA-BS-A0V7 
       45.90        50.86        12.79        88.31        81.57        63.58 
TCGA-BS-A0V8 TCGA-D1-A0ZQ TCGA-D1-A0ZS TCGA-D1-A101 TCGA-D1-A160 TCGA-D1-A168 
       49.55         8.55         4.83         1.74         3.68        36.10 
TCGA-D1-A16J TCGA-D1-A174 TCGA-D1-A17C TCGA-D1-A17H TCGA-D1-A1O8 TCGA-DI-A1BU 
       29.88        19.53         0.99        28.01         3.95        39.29 
TCGA-DI-A1NN TCGA-DI-A2QU TCGA-EC-A1QX TCGA-EO-A1Y5 TCGA-EO-A22T TCGA-EO-A2CG 
       35.38        31.10         7.33        10.92        33.01        32.02 
TCGA-EY-A1GQ TCGA-FI-A2F9 
       17.88        26.01 

$subtype4
TCGA-A5-A0GI TCGA-A5-A0GN TCGA-A5-A0GX TCGA-A5-A0R7 TCGA-A5-A1OK TCGA-AJ-A23O 
       57.53        60.53        68.61        17.56         7.99         1.97 
TCGA-AJ-A2QN TCGA-AJ-A3EJ TCGA-AJ-A3NE TCGA-AJ-A3NH TCGA-AP-A054 TCGA-AP-A0LO 
        2.01         1.64         2.56         0.76        23.31        33.40 
TCGA-AP-A0LV TCGA-AW-A1PO TCGA-AX-A0IS TCGA-AX-A1CK TCGA-AX-A1CN TCGA-AX-A2HC 
       25.08         0.56        35.01        67.46        25.12        33.40 
TCGA-AX-A3FZ TCGA-AX-A3G8 TCGA-B5-A0JY TCGA-B5-A11U TCGA-B5-A11X TCGA-B5-A11Z 
        0.20         1.18        32.98        16.73        19.56        17.36 
TCGA-B5-A1MZ TCGA-BG-A0VT TCGA-BG-A0VX TCGA-BG-A0W2 TCGA-BG-A18C TCGA-BK-A13B 
       15.29         7.36        16.11        37.84        15.45        31.76 
TCGA-BS-A0T9 TCGA-BS-A0TI TCGA-BS-A0U5 TCGA-BS-A0U7 TCGA-BS-A0VI TCGA-D1-A0ZN 
       46.95        61.87        96.49        30.71        63.16        16.83 
TCGA-D1-A102 TCGA-D1-A15Z TCGA-D1-A16R TCGA-D1-A17M TCGA-D1-A17R TCGA-D1-A1NY 
        4.44         1.91         0.69        10.22        11.15        16.87 
TCGA-D1-A2G6 TCGA-DI-A0WH TCGA-DI-A1C3 TCGA-E6-A1M0 TCGA-EO-A22U TCGA-EO-A22X 
        8.48        16.27        24.30        17.03        27.12        32.25 
TCGA-EO-A3AU TCGA-EY-A1GD TCGA-EY-A1GR TCGA-EY-A2OO TCGA-EY-A548 
       19.36         8.15        17.62        45.76         2.14 

$subtype5
TCGA-A5-A0G2 TCGA-A5-A0G5 TCGA-A5-A0GA TCGA-A5-A0GD TCGA-A5-A0GM TCGA-A5-A0GP 
      149.52        37.02        17.85         3.19        60.49        46.55 
TCGA-A5-A0GU TCGA-A5-A0GV TCGA-A5-A0GW TCGA-A5-A0VO TCGA-A5-A0VQ TCGA-A5-A1OF 
       28.24        20.81        23.21        11.97        15.95         7.92 
TCGA-A5-A2K5 TCGA-A5-A2K7 TCGA-AJ-A3BG TCGA-AJ-A3EK TCGA-AP-A051 TCGA-AP-A0L8 
        5.29         5.13         1.02         2.10        83.67        48.79 
TCGA-AP-A0LD TCGA-AP-A0LE TCGA-AP-A0LG TCGA-AP-A0LH TCGA-AP-A0LI TCGA-AP-A0LL 
      117.99       110.37        63.16        36.36        97.71        83.97 
TCGA-AP-A0LN TCGA-AP-A0LQ TCGA-AP-A0LT TCGA-AP-A1DH TCGA-AP-A1DM TCGA-AP-A1DO 
       82.52        80.78        49.22        71.67        55.89        31.30 
TCGA-AP-A1DR TCGA-AP-A1DV TCGA-AP-A1E0 TCGA-AP-A1E1 TCGA-AX-A05S TCGA-AX-A05U 
       49.15         6.71        30.90        10.42        13.58        29.65 
TCGA-AX-A05W TCGA-AX-A05Z TCGA-AX-A060 TCGA-AX-A062 TCGA-AX-A063 TCGA-AX-A06F 
       68.32        46.45        35.34        45.96        66.54        51.09 
TCGA-AX-A0J0 TCGA-AX-A0J1 TCGA-AX-A1C4 TCGA-AX-A1CI TCGA-AX-A2HA TCGA-AX-A3G9 
       40.08        65.88        13.28        72.56        68.71         8.35 
TCGA-B5-A0JN TCGA-B5-A0JU TCGA-B5-A0JV TCGA-B5-A0JZ TCGA-B5-A0K0 TCGA-B5-A0K3 
       80.38        48.76        40.67        28.64        28.34        23.01 
TCGA-B5-A0K6 TCGA-B5-A0K7 TCGA-B5-A0K9 TCGA-B5-A11F TCGA-B5-A11N TCGA-B5-A11V 
       14.01        17.06        11.01       185.75        43.96        19.53 
TCGA-B5-A11Y TCGA-B5-A1MR TCGA-B5-A1MX TCGA-B5-A3FC TCGA-BG-A0LW TCGA-BG-A0LX 
       18.38       191.84        11.67        62.14        18.58        20.15 
TCGA-BG-A0M3 TCGA-BG-A0M4 TCGA-BG-A0M8 TCGA-BG-A0MG TCGA-BG-A0MI TCGA-BG-A0MO 
       35.21        34.98        36.49        48.56        23.47        43.00 
TCGA-BG-A0MQ TCGA-BG-A0MS TCGA-BG-A0MU TCGA-BG-A0RY TCGA-BG-A186 TCGA-BG-A222 
       39.32        30.81        20.25        15.42        13.78         9.57 
TCGA-BS-A0TA TCGA-BS-A0TE TCGA-BS-A0TG TCGA-BS-A0TJ TCGA-BS-A0U8 TCGA-BS-A0UF 
       23.47         4.80        77.92        67.99        97.41        85.84 
TCGA-BS-A0UT TCGA-BS-A0UV TCGA-BS-A0V4 TCGA-BS-A0WQ TCGA-D1-A0ZU TCGA-D1-A103 
       72.72        73.25        59.51        66.44        28.67        21.99 
TCGA-D1-A163 TCGA-D1-A167 TCGA-D1-A16G TCGA-D1-A175 TCGA-D1-A177 TCGA-D1-A179 
       32.58        15.72        27.42         6.64        18.02         6.77 
TCGA-E6-A1LX TCGA-EO-A22R TCGA-EO-A22S TCGA-EY-A1G8 TCGA-EY-A1GI TCGA-EY-A1GL 
       23.38        31.96        35.05        14.96        23.31        13.94 
TCGA-EY-A1GP TCGA-EY-A1GU TCGA-EY-A215 TCGA-EY-A3QX TCGA-EY-A54A TCGA-FI-A2CX 
       18.84        12.43        18.87        13.84         3.72        40.01 
TCGA-FI-A2CY TCGA-FI-A2D0 TCGA-FI-A2D4 TCGA-FI-A2D5 
       34.98        33.99         7.96        14.01 

subtype1 subtype2 subtype3 subtype4 subtype5 
    0.03     0.13     0.92     0.20     1.02 
subtype1 subtype2 subtype3 subtype4 subtype5 
  125.39   113.33    88.31    96.49   191.84 
subtype1 subtype2 subtype3 subtype4 subtype5 
   14.96    24.33    23.46    17.36    31.10 
[1] "0.0 - 125.4 (15.0)" "0.1 - 113.3 (24.3)" "0.9 - 88.3 (23.5)" 
[4] "0.2 - 96.5 (17.4)"  "1.0 - 191.8 (31.1)"
  [1] "subtype1" "subtype5" "subtype1" "subtype5" "subtype2" "subtype5"
  [7] "subtype2" "subtype5" "subtype2" "subtype3" "subtype1" "subtype4"
 [13] "subtype2" "subtype5" "subtype4" "subtype5" "subtype2" "subtype1"
 [19] "subtype5" "subtype5" "subtype5" "subtype4" "subtype3" "subtype4"
 [25] "subtype3" "subtype2" "subtype2" "subtype5" "subtype2" "subtype5"
 [31] "subtype5" "subtype1" "subtype1" "subtype2" "subtype4" "subtype1"
 [37] "subtype1" "subtype1" "subtype5" "subtype5" "subtype1" "subtype1"
 [43] "subtype1" "subtype1" "subtype4" "subtype2" "subtype2" "subtype1"
 [49] "subtype4" "subtype1" "subtype1" "subtype1" "subtype5" "subtype2"
 [55] "subtype2" "subtype4" "subtype5" "subtype3" "subtype1" "subtype2"
 [61] "subtype3" "subtype2" "subtype4" "subtype3" "subtype1" "subtype4"
 [67] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype5"
 [73] "subtype1" "subtype4" "subtype3" "subtype2" "subtype3" "subtype5"
 [79] "subtype1" "subtype5" "subtype5" "subtype1" "subtype5" "subtype5"
 [85] "subtype5" "subtype2" "subtype5" "subtype3" "subtype5" "subtype4"
 [91] "subtype2" "subtype5" "subtype2" "subtype5" "subtype4" "subtype5"
 [97] "subtype2" "subtype5" "subtype5" "subtype2" "subtype3" "subtype5"
[103] "subtype5" "subtype5" "subtype5" "subtype3" "subtype1" "subtype1"
[109] "subtype4" "subtype5" "subtype2" "subtype5" "subtype5" "subtype2"
[115] "subtype5" "subtype5" "subtype5" "subtype5" "subtype3" "subtype1"
[121] "subtype1" "subtype5" "subtype3" "subtype2" "subtype2" "subtype4"
[127] "subtype1" "subtype1" "subtype3" "subtype5" "subtype5" "subtype5"
[133] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
[139] "subtype2" "subtype1" "subtype5" "subtype2" "subtype4" "subtype4"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[151] "subtype1" "subtype5" "subtype4" "subtype1" "subtype1" "subtype1"
[157] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[163] "subtype1" "subtype2" "subtype2" "subtype4" "subtype1" "subtype1"
[169] "subtype1" "subtype1" "subtype4" "subtype5" "subtype2" "subtype1"
[175] "subtype5" "subtype2" "subtype2" "subtype2" "subtype5" "subtype5"
[181] "subtype2" "subtype4" "subtype5" "subtype5" "subtype2" "subtype2"
[187] "subtype5" "subtype1" "subtype5" "subtype5" "subtype1" "subtype5"
[193] "subtype2" "subtype1" "subtype5" "subtype2" "subtype1" "subtype1"
[199] "subtype2" "subtype3" "subtype2" "subtype5" "subtype2" "subtype2"
[205] "subtype2" "subtype2" "subtype2" "subtype4" "subtype5" "subtype2"
[211] "subtype4" "subtype5" "subtype4" "subtype2" "subtype5" "subtype1"
[217] "subtype3" "subtype2" "subtype1" "subtype5" "subtype1" "subtype4"
[223] "subtype3" "subtype5" "subtype1" "subtype5" "subtype5" "subtype2"
[229] "subtype2" "subtype5" "subtype5" "subtype1" "subtype2" "subtype5"
[235] "subtype2" "subtype2" "subtype2" "subtype5" "subtype2" "subtype5"
[241] "subtype2" "subtype5" "subtype5" "subtype5" "subtype1" "subtype5"
[247] "subtype5" "subtype4" "subtype2" "subtype2" "subtype4" "subtype2"
[253] "subtype2" "subtype4" "subtype2" "subtype1" "subtype5" "subtype2"
[259] "subtype2" "subtype2" "subtype4" "subtype1" "subtype5" "subtype1"
[265] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[271] "subtype1" "subtype4" "subtype2" "subtype1" "subtype1" "subtype2"
[277] "subtype4" "subtype5" "subtype2" "subtype2" "subtype5" "subtype5"
[283] "subtype4" "subtype5" "subtype4" "subtype4" "subtype5" "subtype1"
[289] "subtype3" "subtype5" "subtype2" "subtype3" "subtype2" "subtype5"
[295] "subtype5" "subtype5" "subtype2" "subtype3" "subtype3" "subtype4"
[301] "subtype5" "subtype4" "subtype2" "subtype1" "subtype3" "subtype2"
[307] "subtype3" "subtype5" "subtype2" "subtype1" "subtype3" "subtype4"
[313] "subtype5" "subtype1" "subtype2" "subtype1" "subtype4" "subtype3"
[319] "subtype2" "subtype2" "subtype5" "subtype2" "subtype5" "subtype3"
[325] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype5"
[331] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype4"
[337] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype5"
[343] "subtype2" "subtype5" "subtype5" "subtype2" "subtype2" "subtype3"
[349] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype4"
[355] "subtype2" "subtype2" "subtype4" "subtype2" "subtype2" "subtype2"
[361] "subtype2" "subtype1" "subtype1" "subtype2" "subtype4" "subtype2"
[367] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[373] "subtype4" "subtype1" "subtype1" "subtype1" "subtype1" "subtype4"
[379] "subtype3" "subtype2" "subtype4" "subtype3" "subtype1" "subtype1"
[385] "subtype3" "subtype1" "subtype5" "subtype1" "subtype4" "subtype1"
[391] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[397] "subtype1" "subtype5" "subtype5" "subtype3" "subtype4" "subtype4"
[403] "subtype2" "subtype3" "subtype1" "subtype1" "subtype4" "subtype1"
[409] "subtype1" "subtype5" "subtype1" "subtype4" "subtype2" "subtype2"
[415] "subtype2" "subtype5" "subtype1" "subtype2" "subtype5" "subtype2"
[421] "subtype1" "subtype5" "subtype3" "subtype4" "subtype1" "subtype1"
[427] "subtype5" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[433] "subtype1" "subtype1" "subtype5" "subtype1" "subtype1" "subtype4"
[439] "subtype1" "subtype1" "subtype1" "subtype5" "subtype1" "subtype1"
[445] "subtype4" "subtype2" "subtype5" "subtype5" "subtype5" "subtype5"
[451] "subtype1" "subtype5" "subtype5" "subtype1" "subtype1" "subtype1"
[457] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[463] "subtype1" "subtype1" "subtype1" "subtype1"
  [1] "subtype1" "subtype5" "subtype1" "subtype5" "subtype2" "subtype5"
  [7] "subtype2" "subtype5" "subtype2" "subtype3" "subtype1" "subtype4"
 [13] "subtype2" "subtype5" "subtype4" "subtype5" "subtype2" "subtype1"
 [19] "subtype5" "subtype5" "subtype5" "subtype4" "subtype3" "subtype4"
 [25] "subtype3" "subtype2" "subtype2" "subtype5" "subtype2" "subtype5"
 [31] "subtype5" "subtype1" "subtype1" "subtype2" "subtype4" "subtype1"
 [37] "subtype1" "subtype1" "subtype5" "subtype5" "subtype1" "subtype1"
 [43] "subtype1" "subtype1" "subtype4" "subtype2" "subtype2" "subtype1"
 [49] "subtype4" "subtype1" "subtype1" "subtype1" "subtype5" "subtype2"
 [55] "subtype2" "subtype4" "subtype5" "subtype3" "subtype1" "subtype2"
 [61] "subtype3" "subtype2" "subtype4" "subtype3" "subtype1" "subtype4"
 [67] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype5"
 [73] "subtype1" "subtype4" "subtype3" "subtype2" "subtype3" "subtype5"
 [79] "subtype1" "subtype5" "subtype5" "subtype1" "subtype5" "subtype5"
 [85] "subtype5" "subtype2" "subtype5" "subtype3" "subtype5" "subtype4"
 [91] "subtype2" "subtype5" "subtype2" "subtype5" "subtype4" "subtype5"
 [97] "subtype2" "subtype5" "subtype5" "subtype2" "subtype3" "subtype5"
[103] "subtype5" "subtype5" "subtype5" "subtype3" "subtype1" "subtype1"
[109] "subtype4" "subtype5" "subtype2" "subtype5" "subtype5" "subtype2"
[115] "subtype5" "subtype5" "subtype5" "subtype5" "subtype3" "subtype1"
[121] "subtype1" "subtype5" "subtype3" "subtype2" "subtype2" "subtype4"
[127] "subtype1" "subtype1" "subtype3" "subtype5" "subtype5" "subtype5"
[133] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
[139] "subtype2" "subtype1" "subtype5" "subtype2" "subtype4" "subtype4"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[151] "subtype1" "subtype5" "subtype4" "subtype1" "subtype1" "subtype1"
[157] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[163] "subtype1" "subtype2" "subtype2" "subtype4" "subtype1" "subtype1"
[169] "subtype1" "subtype1" "subtype4" "subtype5" "subtype2" "subtype1"
[175] "subtype5" "subtype2" "subtype2" "subtype2" "subtype5" "subtype5"
[181] "subtype2" "subtype4" "subtype5" "subtype5" "subtype2" "subtype2"
[187] "subtype5" "subtype1" "subtype5" "subtype5" "subtype1" "subtype5"
[193] "subtype2" "subtype1" "subtype5" "subtype2" "subtype1" "subtype1"
[199] "subtype2" "subtype3" "subtype2" "subtype5" "subtype2" "subtype2"
[205] "subtype2" "subtype2" "subtype2" "subtype4" "subtype5" "subtype2"
[211] "subtype4" "subtype5" "subtype4" "subtype2" "subtype5" "subtype1"
[217] "subtype3" "subtype2" "subtype1" "subtype5" "subtype1" "subtype4"
[223] "subtype3" "subtype5" "subtype1" "subtype5" "subtype5" "subtype2"
[229] "subtype2" "subtype5" "subtype5" "subtype1" "subtype2" "subtype5"
[235] "subtype2" "subtype2" "subtype2" "subtype5" "subtype2" "subtype5"
[241] "subtype2" "subtype5" "subtype5" "subtype5" "subtype1" "subtype5"
[247] "subtype5" "subtype4" "subtype2" "subtype2" "subtype4" "subtype2"
[253] "subtype2" "subtype4" "subtype2" "subtype1" "subtype5" "subtype2"
[259] "subtype2" "subtype2" "subtype4" "subtype1" "subtype5" "subtype1"
[265] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[271] "subtype1" "subtype4" "subtype2" "subtype1" "subtype1" "subtype2"
[277] "subtype4" "subtype5" "subtype2" "subtype2" "subtype5" "subtype5"
[283] "subtype4" "subtype5" "subtype4" "subtype4" "subtype5" "subtype1"
[289] "subtype3" "subtype5" "subtype2" "subtype3" "subtype2" "subtype5"
[295] "subtype5" "subtype5" "subtype2" "subtype3" "subtype3" "subtype4"
[301] "subtype5" "subtype4" "subtype2" "subtype1" "subtype3" "subtype2"
[307] "subtype3" "subtype5" "subtype2" "subtype1" "subtype3" "subtype4"
[313] "subtype5" "subtype1" "subtype2" "subtype1" "subtype4" "subtype3"
[319] "subtype2" "subtype2" "subtype5" "subtype2" "subtype5" "subtype3"
[325] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype5"
[331] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype4"
[337] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype5"
[343] "subtype2" "subtype5" "subtype5" "subtype2" "subtype2" "subtype3"
[349] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype4"
[355] "subtype2" "subtype2" "subtype4" "subtype2" "subtype2" "subtype2"
[361] "subtype2" "subtype1" "subtype1" "subtype2" "subtype4" "subtype2"
[367] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[373] "subtype4" "subtype1" "subtype1" "subtype1" "subtype1" "subtype4"
[379] "subtype3" "subtype2" "subtype4" "subtype3" "subtype1" "subtype1"
[385] "subtype3" "subtype1" "subtype5" "subtype1" "subtype4" "subtype1"
[391] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[397] "subtype1" "subtype5" "subtype5" "subtype3" "subtype4" "subtype4"
[403] "subtype2" "subtype3" "subtype1" "subtype1" "subtype4" "subtype1"
[409] "subtype1" "subtype5" "subtype1" "subtype4" "subtype2" "subtype2"
[415] "subtype2" "subtype5" "subtype1" "subtype2" "subtype5" "subtype2"
[421] "subtype1" "subtype5" "subtype3" "subtype4" "subtype1" "subtype1"
[427] "subtype5" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[433] "subtype1" "subtype1" "subtype5" "subtype1" "subtype1" "subtype4"
[439] "subtype1" "subtype1" "subtype1" "subtype5" "subtype1" "subtype1"
[445] "subtype4" "subtype2" "subtype5" "subtype5" "subtype5" "subtype5"
[451] "subtype1" "subtype5" "subtype5" "subtype1" "subtype1" "subtype1"
[457] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[463] "subtype1" "subtype1" "subtype1" "subtype1"
  [1] "subtype1" "subtype5" "subtype1" "subtype5" "subtype2" "subtype5"
  [7] "subtype2" "subtype5" "subtype2" "subtype3" "subtype1" "subtype4"
 [13] "subtype2" "subtype5" "subtype4" "subtype5" "subtype2" "subtype1"
 [19] "subtype5" "subtype5" "subtype5" "subtype4" "subtype3" "subtype4"
 [25] "subtype3" "subtype2" "subtype2" "subtype5" "subtype2" "subtype5"
 [31] "subtype5" "subtype1" "subtype1" "subtype2" "subtype4" "subtype1"
 [37] "subtype1" "subtype1" "subtype5" "subtype5" "subtype1" "subtype1"
 [43] "subtype1" "subtype1" "subtype4" "subtype2" "subtype2" "subtype1"
 [49] "subtype4" "subtype1" "subtype1" "subtype1" "subtype5" "subtype2"
 [55] "subtype2" "subtype4" "subtype5" "subtype3" "subtype1" "subtype2"
 [61] "subtype3" "subtype2" "subtype4" "subtype3" "subtype1" "subtype4"
 [67] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype5"
 [73] "subtype1" "subtype4" "subtype3" "subtype2" "subtype3" "subtype5"
 [79] "subtype1" "subtype5" "subtype5" "subtype1" "subtype5" "subtype5"
 [85] "subtype5" "subtype2" "subtype5" "subtype3" "subtype5" "subtype4"
 [91] "subtype2" "subtype5" "subtype2" "subtype5" "subtype4" "subtype5"
 [97] "subtype2" "subtype5" "subtype5" "subtype2" "subtype3" "subtype5"
[103] "subtype5" "subtype5" "subtype5" "subtype3" "subtype1" "subtype1"
[109] "subtype4" "subtype5" "subtype2" "subtype5" "subtype5" "subtype2"
[115] "subtype5" "subtype5" "subtype5" "subtype5" "subtype3" "subtype1"
[121] "subtype1" "subtype5" "subtype3" "subtype2" "subtype2" "subtype4"
[127] "subtype1" "subtype1" "subtype3" "subtype5" "subtype5" "subtype5"
[133] "subtype1" "subtype1" "subtype1" "subtype2" "subtype3" "subtype3"
[139] "subtype2" "subtype1" "subtype5" "subtype2" "subtype4" "subtype4"
[145] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
[151] "subtype1" "subtype5" "subtype4" "subtype1" "subtype1" "subtype1"
[157] "subtype1" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[163] "subtype1" "subtype2" "subtype2" "subtype4" "subtype1" "subtype1"
[169] "subtype1" "subtype1" "subtype4" "subtype5" "subtype2" "subtype1"
[175] "subtype5" "subtype2" "subtype2" "subtype2" "subtype5" "subtype5"
[181] "subtype2" "subtype4" "subtype5" "subtype5" "subtype2" "subtype2"
[187] "subtype5" "subtype1" "subtype5" "subtype5" "subtype1" "subtype5"
[193] "subtype2" "subtype1" "subtype5" "subtype2" "subtype1" "subtype1"
[199] "subtype2" "subtype3" "subtype2" "subtype5" "subtype2" "subtype2"
[205] "subtype2" "subtype2" "subtype2" "subtype4" "subtype5" "subtype2"
[211] "subtype4" "subtype5" "subtype4" "subtype2" "subtype5" "subtype1"
[217] "subtype3" "subtype2" "subtype1" "subtype5" "subtype1" "subtype4"
[223] "subtype3" "subtype5" "subtype1" "subtype5" "subtype5" "subtype2"
[229] "subtype2" "subtype5" "subtype5" "subtype1" "subtype2" "subtype5"
[235] "subtype2" "subtype2" "subtype2" "subtype5" "subtype2" "subtype5"
[241] "subtype2" "subtype5" "subtype5" "subtype5" "subtype1" "subtype5"
[247] "subtype5" "subtype4" "subtype2" "subtype2" "subtype4" "subtype2"
[253] "subtype2" "subtype4" "subtype2" "subtype1" "subtype5" "subtype2"
[259] "subtype2" "subtype2" "subtype4" "subtype1" "subtype5" "subtype1"
[265] "subtype2" "subtype1" "subtype1" "subtype2" "subtype2" "subtype1"
[271] "subtype1" "subtype4" "subtype2" "subtype1" "subtype1" "subtype2"
[277] "subtype4" "subtype5" "subtype2" "subtype2" "subtype5" "subtype5"
[283] "subtype4" "subtype5" "subtype4" "subtype4" "subtype5" "subtype1"
[289] "subtype3" "subtype5" "subtype2" "subtype3" "subtype2" "subtype5"
[295] "subtype5" "subtype5" "subtype2" "subtype3" "subtype3" "subtype4"
[301] "subtype5" "subtype4" "subtype2" "subtype1" "subtype3" "subtype2"
[307] "subtype3" "subtype5" "subtype2" "subtype1" "subtype3" "subtype4"
[313] "subtype5" "subtype1" "subtype2" "subtype1" "subtype4" "subtype3"
[319] "subtype2" "subtype2" "subtype5" "subtype2" "subtype5" "subtype3"
[325] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype5"
[331] "subtype1" "subtype3" "subtype1" "subtype2" "subtype2" "subtype4"
[337] "subtype1" "subtype2" "subtype2" "subtype1" "subtype3" "subtype5"
[343] "subtype2" "subtype5" "subtype5" "subtype2" "subtype2" "subtype3"
[349] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype4"
[355] "subtype2" "subtype2" "subtype4" "subtype2" "subtype2" "subtype2"
[361] "subtype2" "subtype1" "subtype1" "subtype2" "subtype4" "subtype2"
[367] "subtype2" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[373] "subtype4" "subtype1" "subtype1" "subtype1" "subtype1" "subtype4"
[379] "subtype3" "subtype2" "subtype4" "subtype3" "subtype1" "subtype1"
[385] "subtype3" "subtype1" "subtype5" "subtype1" "subtype4" "subtype1"
[391] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[397] "subtype1" "subtype5" "subtype5" "subtype3" "subtype4" "subtype4"
[403] "subtype2" "subtype3" "subtype1" "subtype1" "subtype4" "subtype1"
[409] "subtype1" "subtype5" "subtype1" "subtype4" "subtype2" "subtype2"
[415] "subtype2" "subtype5" "subtype1" "subtype2" "subtype5" "subtype2"
[421] "subtype1" "subtype5" "subtype3" "subtype4" "subtype1" "subtype1"
[427] "subtype5" "subtype1" "subtype2" "subtype2" "subtype2" "subtype1"
[433] "subtype1" "subtype1" "subtype5" "subtype1" "subtype1" "subtype4"
[439] "subtype1" "subtype1" "subtype1" "subtype5" "subtype1" "subtype1"
[445] "subtype4" "subtype2" "subtype5" "subtype5" "subtype5" "subtype5"
[451] "subtype1" "subtype5" "subtype5" "subtype1" "subtype1" "subtype1"
[457] "subtype1" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[463] "subtype1" "subtype1" "subtype1" "subtype1"
D9V2, continuous
          vv
clus       ENDOMETRIOID ENDOMETRIAL ADENOCARCINOMA
  subtype1                                      56
  subtype2                                     124
  subtype3                                      32
  subtype4                                      50
  subtype5                                     100
          vv
clus       MIXED SEROUS AND ENDOMETRIOID SEROUS ENDOMETRIAL ADENOCARCINOMA
  subtype1                             9                                66
  subtype2                             2                                 2
  subtype3                             1                                12
  subtype4                             2                                 1
  subtype5                             4                                 8
D9V3, multiclass
D9V4, binary
          cls
clus         0   1
  subtype1  27 104
  subtype2  30  98
  subtype3  13  32
  subtype4  11  42
  subtype5  50  62
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   27  104
  subtype2   30   98
  subtype3   13   32
  subtype4   11   42
  subtype5   50   62
          vv
clus       R0 R1 R2 RX
  subtype1 76 10  9  9
  subtype2 94  3  1  8
  subtype3 36  3  0  2
  subtype4 37  2  1  4
  subtype5 79  6  4  3
D9V5, multiclass

Clustering(10) Variable = MIRSEQ_CHIERARCHICAL
D10V1, survival
          sevent
clus2        0   1
  subtype1  22   2
  subtype2 206  14
  subtype3 185  37
subtype1 subtype2 subtype3 
      24      220      222 
subtype1 subtype2 subtype3 
       2       14       37 
$subtype1
TCGA-A5-A0GW TCGA-A5-A0VP TCGA-A5-A2K5 TCGA-AJ-A3OL TCGA-AP-A0LS TCGA-AP-A1DH 
       23.21        42.31         5.29         1.87        63.06        71.67 
TCGA-AX-A2HH TCGA-B5-A0K4 TCGA-B5-A11E TCGA-B5-A11P TCGA-B5-A1MW TCGA-B5-A3FC 
       17.72        17.88         8.71        36.82        14.70        62.14 
TCGA-BG-A0LX TCGA-BK-A4ZD TCGA-BS-A0TJ TCGA-BS-A0U9 TCGA-BS-A0UV TCGA-BS-A0V8 
       20.15         6.94        67.99        67.20        73.25        49.55 
TCGA-D1-A16N TCGA-D1-A16V TCGA-EY-A215 TCGA-EY-A2OP TCGA-EY-A547 TCGA-FI-A2D5 
       31.07         1.41        18.87        31.00        17.88        14.01 

$subtype2
TCGA-A5-A0G9 TCGA-A5-A0GB TCGA-A5-A0GD TCGA-A5-A0GE TCGA-A5-A0GG TCGA-A5-A0GI 
       83.51        32.78         3.19       105.37        87.32        57.53 
TCGA-A5-A0GJ TCGA-A5-A0GM TCGA-A5-A0GQ TCGA-A5-A0GU TCGA-A5-A0GV TCGA-A5-A0GX 
       65.75        60.49        38.37        28.24        20.81        68.61 
TCGA-A5-A0R6 TCGA-A5-A0R8 TCGA-A5-A0R9 TCGA-A5-A0RA TCGA-A5-A0VO TCGA-A5-A1OF 
       19.96        19.56        24.62        29.03        11.97         7.92 
TCGA-A5-A1OJ TCGA-A5-A1OK TCGA-AJ-A2QK TCGA-AJ-A2QL TCGA-AJ-A2QO TCGA-AJ-A3BI 
        9.60         7.99         0.39        19.79         2.99         2.01 
TCGA-AJ-A3BK TCGA-AJ-A3I9 TCGA-AJ-A3NC TCGA-AJ-A3NG TCGA-AJ-A3OK TCGA-AP-A051 
        1.68         1.28         6.90         1.71         4.67        83.67 
TCGA-AP-A05O TCGA-AP-A05P TCGA-AP-A0LJ TCGA-AP-A0LL TCGA-AP-A0LN TCGA-AP-A0LP 
       12.20        20.91        31.73        83.97        82.52        61.64 
TCGA-AP-A0LQ TCGA-AP-A0LV TCGA-AP-A1DK TCGA-AP-A1DP TCGA-AP-A1DV TCGA-AP-A1E0 
       80.78        25.08        60.36        35.54         6.71        30.90 
TCGA-AP-A1E1 TCGA-AP-A1E3 TCGA-AX-A05T TCGA-AX-A05U TCGA-AX-A05W TCGA-AX-A05Y 
       10.42        27.85        19.82        29.65        68.32        72.03 
TCGA-AX-A05Z TCGA-AX-A062 TCGA-AX-A063 TCGA-AX-A06B TCGA-AX-A06D TCGA-AX-A06H 
       46.45        45.96        66.54        53.88        12.26        27.39 
TCGA-AX-A06J TCGA-AX-A06L TCGA-AX-A0IS TCGA-AX-A1C4 TCGA-AX-A1C5 TCGA-AX-A1C9 
       30.02        60.62        35.01        13.28        19.20        15.25 
TCGA-AX-A1CE TCGA-AX-A1CJ TCGA-AX-A1CK TCGA-AX-A2H7 TCGA-AX-A2H8 TCGA-AX-A2HA 
       20.05        54.08        67.46        33.53        61.18        68.71 
TCGA-AX-A2HJ TCGA-AX-A3FW TCGA-AX-A3FX TCGA-AX-A3G1 TCGA-AX-A3GB TCGA-B5-A0JR 
       27.32         0.33         0.13        20.52        14.47        56.91 
TCGA-B5-A0JS TCGA-B5-A0JT TCGA-B5-A0JU TCGA-B5-A0JV TCGA-B5-A0JX TCGA-B5-A0K0 
       46.75        43.13        48.76        40.67        44.71        28.34 
TCGA-B5-A0K1 TCGA-B5-A0K2 TCGA-B5-A0K6 TCGA-B5-A0K7 TCGA-B5-A0KB TCGA-B5-A11F 
       30.51        25.91        14.01        17.06         4.08       185.75 
TCGA-B5-A11G TCGA-B5-A11J TCGA-B5-A11L TCGA-B5-A11M TCGA-B5-A11N TCGA-B5-A11O 
      113.33        54.44        45.90        44.75        43.96        40.93 
TCGA-B5-A11Q TCGA-B5-A11R TCGA-B5-A11S TCGA-B5-A11V TCGA-B5-A11W TCGA-B5-A11Y 
       32.05        33.50        27.32        19.53        19.46        18.38 
TCGA-B5-A11Z TCGA-B5-A121 TCGA-B5-A1MV TCGA-B5-A1MX TCGA-B5-A1MZ TCGA-BG-A0LW 
       17.36        16.57        14.40        11.67        15.29        18.58 
TCGA-BG-A0M0 TCGA-BG-A0M2 TCGA-BG-A0M3 TCGA-BG-A0M7 TCGA-BG-A0M8 TCGA-BG-A0M9 
       19.30        20.91        35.21        38.37        36.49        28.27 
TCGA-BG-A0MA TCGA-BG-A0MC TCGA-BG-A0MG TCGA-BG-A0MH TCGA-BG-A0MI TCGA-BG-A0MK 
       10.72        41.52        48.56        44.09        23.47        43.30 
TCGA-BG-A0MO TCGA-BG-A0MQ TCGA-BG-A0MS TCGA-BG-A0MT TCGA-BG-A0MU TCGA-BG-A0RY 
       43.00        39.32        30.81        21.17        20.25        15.42 
TCGA-BG-A0VT TCGA-BG-A0VV TCGA-BG-A0VW TCGA-BG-A0VX TCGA-BG-A0VZ TCGA-BG-A0W1 
        7.36         8.55         4.31        16.11        28.54        29.82 
TCGA-BG-A0W2 TCGA-BG-A0YU TCGA-BG-A186 TCGA-BG-A187 TCGA-BG-A18A TCGA-BG-A18B 
       37.84        14.83        13.78        14.73        14.01        15.45 
TCGA-BG-A222 TCGA-BG-A2L7 TCGA-BK-A0C9 TCGA-BK-A0CA TCGA-BK-A13B TCGA-BK-A13C 
        9.57         5.82        12.69        34.98        31.76        24.99 
TCGA-BK-A56F TCGA-BS-A0T9 TCGA-BS-A0TA TCGA-BS-A0TC TCGA-BS-A0TD TCGA-BS-A0TG 
        6.58        46.95        23.47        85.55        78.18        77.92 
TCGA-BS-A0TI TCGA-BS-A0U5 TCGA-BS-A0U8 TCGA-BS-A0UA TCGA-BS-A0UJ TCGA-BS-A0UM 
       61.87        96.49        97.41        88.31        82.39        86.89 
TCGA-BS-A0V4 TCGA-BS-A0V6 TCGA-BS-A0V7 TCGA-BS-A0WQ TCGA-D1-A0ZO TCGA-D1-A0ZR 
       59.51        62.79        63.58        66.44        19.79         0.56 
TCGA-D1-A0ZU TCGA-D1-A0ZV TCGA-D1-A101 TCGA-D1-A102 TCGA-D1-A103 TCGA-D1-A15W 
       28.67        23.93         1.74         4.44        21.99        30.08 
TCGA-D1-A161 TCGA-D1-A162 TCGA-D1-A165 TCGA-D1-A169 TCGA-D1-A16B TCGA-D1-A16D 
       29.33        37.64         0.66        37.32        36.36        37.51 
TCGA-D1-A16E TCGA-D1-A16F TCGA-D1-A16O TCGA-D1-A16Q TCGA-D1-A16R TCGA-D1-A16X 
       36.79         2.63        33.60        10.65         0.69         3.65 
TCGA-D1-A174 TCGA-D1-A175 TCGA-D1-A176 TCGA-D1-A17A TCGA-D1-A17B TCGA-D1-A17C 
       19.53         6.64        30.15         1.58         6.97         0.99 
TCGA-D1-A17D TCGA-D1-A17F TCGA-D1-A17L TCGA-D1-A17N TCGA-D1-A17Q TCGA-D1-A17S 
       30.44         1.28        26.37         1.51         1.78        24.30 
TCGA-D1-A17T TCGA-D1-A17U TCGA-D1-A1NS TCGA-D1-A1NX TCGA-D1-A1NZ TCGA-D1-A1O0 
        2.30        22.92         1.41        18.25        18.02         2.07 
TCGA-D1-A1O5 TCGA-D1-A1O7 TCGA-D1-A1O8 TCGA-D1-A2G5 TCGA-DI-A1BY TCGA-DI-A1C3 
       15.06         1.05         3.95        41.42        36.62        24.30 
TCGA-DI-A2QU TCGA-E6-A2P9 TCGA-EC-A1NJ TCGA-EC-A24G TCGA-EO-A1Y7 TCGA-EO-A22Y 
       31.10         6.64        16.01        16.77         7.99        25.02 
TCGA-EO-A2CH TCGA-EY-A1G8 TCGA-EY-A1GD TCGA-EY-A1GE TCGA-EY-A1GF TCGA-EY-A1GH 
       19.40        14.96         8.15        24.36        27.16        23.31 
TCGA-EY-A1GI TCGA-EY-A1GK TCGA-EY-A1GL TCGA-EY-A1GU TCGA-EY-A1GW TCGA-EY-A1GX 
       23.31        22.78        13.94        12.43         8.55         6.48 
TCGA-EY-A1H0 TCGA-EY-A549 TCGA-FI-A2D4 TCGA-FI-A2F4 
       19.33         6.97         7.96        28.93 

$subtype3
TCGA-A5-A0G1 TCGA-A5-A0G2 TCGA-A5-A0G3 TCGA-A5-A0G5 TCGA-A5-A0GA TCGA-A5-A0GH 
      106.88       149.52        46.95        37.02        17.85        74.07 
TCGA-A5-A0GN TCGA-A5-A0GP TCGA-A5-A0GR TCGA-A5-A0R7 TCGA-A5-A0VQ TCGA-A5-A1OG 
       60.53        46.55        36.82        17.56        15.95        11.44 
TCGA-A5-A1OH TCGA-A5-A2K2 TCGA-A5-A2K3 TCGA-A5-A2K4 TCGA-A5-A2K7 TCGA-A5-A3LO 
       36.30        91.00        46.32        28.64         5.13         7.33 
TCGA-A5-A3LP TCGA-AJ-A23M TCGA-AJ-A23N TCGA-AJ-A23O TCGA-AJ-A2QM TCGA-AJ-A2QN 
       14.96         1.02         1.08         1.97         1.02         2.01 
TCGA-AJ-A3BD TCGA-AJ-A3BF TCGA-AJ-A3BG TCGA-AJ-A3EJ TCGA-AJ-A3EK TCGA-AJ-A3EL 
        0.49         1.12         1.02         1.64         2.10         2.14 
TCGA-AJ-A3EM TCGA-AJ-A3IA TCGA-AJ-A3NE TCGA-AJ-A3NF TCGA-AJ-A3NH TCGA-AJ-A3OJ 
        1.64         0.92         2.56         1.35         0.76         1.94 
TCGA-AJ-A3QS TCGA-AJ-A3TW TCGA-AP-A053 TCGA-AP-A054 TCGA-AP-A059 TCGA-AP-A0L8 
        1.84         1.68         5.95        23.31         8.22        48.79 
TCGA-AP-A0L9 TCGA-AP-A0LD TCGA-AP-A0LE TCGA-AP-A0LF TCGA-AP-A0LG TCGA-AP-A0LH 
      125.39       117.99       110.37         3.39        63.16        36.36 
TCGA-AP-A0LI TCGA-AP-A0LM TCGA-AP-A0LO TCGA-AP-A0LT TCGA-AP-A1DM TCGA-AP-A1DO 
       97.71        27.12        33.40        49.22        55.89        31.30 
TCGA-AP-A1DQ TCGA-AP-A1DR TCGA-AP-A1E4 TCGA-AP-A3K1 TCGA-AW-A1PO TCGA-AX-A05S 
       41.92        49.15        16.24        18.25         0.56        13.58 
TCGA-AX-A060 TCGA-AX-A064 TCGA-AX-A06F TCGA-AX-A0IU TCGA-AX-A0IW TCGA-AX-A0IZ 
       35.34        34.98        51.09        28.54        37.74        43.82 
TCGA-AX-A0J0 TCGA-AX-A0J1 TCGA-AX-A1C7 TCGA-AX-A1C8 TCGA-AX-A1CA TCGA-AX-A1CC 
       40.08        65.88        16.93        13.55        20.28        12.43 
TCGA-AX-A1CF TCGA-AX-A1CI TCGA-AX-A1CN TCGA-AX-A1CP TCGA-AX-A1CR TCGA-AX-A2H2 
       76.83        72.56        25.12        36.39        11.08         4.77 
TCGA-AX-A2H4 TCGA-AX-A2H5 TCGA-AX-A2HC TCGA-AX-A2HD TCGA-AX-A2HF TCGA-AX-A2HG 
       30.08        71.24        33.40        40.50        16.08        21.70 
TCGA-AX-A2HK TCGA-AX-A2IN TCGA-AX-A2IO TCGA-AX-A3FS TCGA-AX-A3FT TCGA-AX-A3FZ 
        2.96        31.10        38.66         0.23         0.10         0.20 
TCGA-AX-A3G3 TCGA-AX-A3G4 TCGA-AX-A3G7 TCGA-AX-A3G8 TCGA-AX-A3G9 TCGA-AX-A3GI 
        0.03         0.13         0.23         1.18         8.35         0.13 
TCGA-B5-A0JN TCGA-B5-A0JY TCGA-B5-A0JZ TCGA-B5-A0K3 TCGA-B5-A0K8 TCGA-B5-A0K9 
       80.38        32.98        28.64        23.01        17.82        11.01 
TCGA-B5-A11H TCGA-B5-A11I TCGA-B5-A11U TCGA-B5-A11X TCGA-B5-A1MR TCGA-B5-A1MS 
       88.34        75.72        16.73        19.56       191.84       102.05 
TCGA-B5-A1MU TCGA-B5-A1MY TCGA-B5-A1N2 TCGA-B5-A3S1 TCGA-BG-A0M4 TCGA-BG-A0M6 
       50.86        11.87        12.79         5.00        34.98         7.92 
TCGA-BG-A0YV TCGA-BG-A18C TCGA-BG-A221 TCGA-BG-A2AE TCGA-BG-A3EW TCGA-BG-A3PP 
       12.56        15.45         1.81         0.53        11.31         6.81 
TCGA-BK-A0CC TCGA-BK-A139 TCGA-BK-A26L TCGA-BS-A0TE TCGA-BS-A0U7 TCGA-BS-A0UF 
       10.22        10.16        24.13         4.80        30.71        85.84 
TCGA-BS-A0UL TCGA-BS-A0UT TCGA-BS-A0VI TCGA-D1-A0ZN TCGA-D1-A0ZP TCGA-D1-A0ZQ 
       81.57        72.72        63.16        16.83        29.95         8.55 
TCGA-D1-A0ZS TCGA-D1-A0ZZ TCGA-D1-A15V TCGA-D1-A15X TCGA-D1-A15Z TCGA-D1-A160 
        4.83        22.52        39.48        29.88         1.91         3.68 
TCGA-D1-A163 TCGA-D1-A167 TCGA-D1-A168 TCGA-D1-A16G TCGA-D1-A16I TCGA-D1-A16J 
       32.58        15.72        36.10        27.42        11.47        29.88 
TCGA-D1-A16S TCGA-D1-A16Y TCGA-D1-A177 TCGA-D1-A179 TCGA-D1-A17H TCGA-D1-A17K 
       18.67        17.49        18.02         6.77        28.01        28.08 
TCGA-D1-A17M TCGA-D1-A17R TCGA-D1-A1NU TCGA-D1-A1NW TCGA-D1-A1NY TCGA-D1-A2G0 
       10.22        11.15        13.22         0.72        16.87         3.52 
TCGA-D1-A2G6 TCGA-D1-A2G7 TCGA-D1-A3DA TCGA-D1-A3DG TCGA-D1-A3DH TCGA-DI-A0WH 
        8.48        44.88         0.26         4.27         4.11        16.27 
TCGA-DI-A1BU TCGA-DI-A1NN TCGA-DI-A1NO TCGA-DI-A2QT TCGA-DI-A2QY TCGA-E6-A1LX 
       39.29        35.38         9.37        12.39        91.96        23.38 
TCGA-E6-A1LZ TCGA-E6-A1M0 TCGA-E6-A2P8 TCGA-EC-A1QX TCGA-EO-A1Y5 TCGA-EO-A1Y8 
       48.36        17.03         2.37         7.33        10.92        10.78 
TCGA-EO-A22R TCGA-EO-A22S TCGA-EO-A22T TCGA-EO-A22U TCGA-EO-A22X TCGA-EO-A2CG 
       31.96        35.05        33.01        27.12        32.25        32.02 
TCGA-EO-A3AS TCGA-EO-A3AU TCGA-EO-A3AY TCGA-EY-A1G7 TCGA-EY-A1GC TCGA-EY-A1GJ 
       34.39        19.36        12.89         6.21         4.54        23.90 
TCGA-EY-A1GM TCGA-EY-A1GO TCGA-EY-A1GP TCGA-EY-A1GQ TCGA-EY-A1GR TCGA-EY-A1GS 
        6.87        19.27        18.84        17.88        17.62        15.09 
TCGA-EY-A1GT TCGA-EY-A1GV TCGA-EY-A210 TCGA-EY-A212 TCGA-EY-A214 TCGA-EY-A2OM 
       16.11        15.81        12.59         3.58        14.40        22.82 
TCGA-EY-A2ON TCGA-EY-A2OO TCGA-EY-A2OQ TCGA-EY-A3L3 TCGA-EY-A3QX TCGA-EY-A4KR 
       13.45        45.76        29.06         8.48        13.84         6.44 
TCGA-EY-A548 TCGA-EY-A54A TCGA-FI-A2CX TCGA-FI-A2CY TCGA-FI-A2D0 TCGA-FI-A2D2 
        2.14         3.72        40.01        34.98        33.99        36.00 
TCGA-FI-A2D6 TCGA-FI-A2EU TCGA-FI-A2EW TCGA-FI-A2EX TCGA-FI-A2EY TCGA-FI-A2F8 
        8.98        97.08        59.01         9.07        29.03        25.02 
TCGA-FI-A2F9 TCGA-FI-A3PV TCGA-H5-A2HR TCGA-K6-A3WQ TCGA-KJ-A3U4 TCGA-PG-A5BC 
       26.01        41.06         1.74         6.67         2.40        10.82 

subtype1 subtype2 subtype3 
    1.41     0.13     0.03 
subtype1 subtype2 subtype3 
   73.25   185.75   191.84 
subtype1 subtype2 subtype3 
   21.68    24.30    17.59 
[1] "1.4 - 73.2 (21.7)"  "0.1 - 185.8 (24.3)" "0.0 - 191.8 (17.6)"
  [1] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
 [13] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
 [19] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [25] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [31] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
 [37] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
 [43] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
 [49] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
 [55] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
 [61] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
 [67] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
 [73] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
 [79] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [85] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
 [91] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
 [97] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[103] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[109] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[115] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[121] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[133] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[139] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[151] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[157] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[163] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[169] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[175] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[181] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[193] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[205] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[211] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[217] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[223] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[229] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[235] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[241] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[247] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[253] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[265] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[271] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[277] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[283] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[289] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[295] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[301] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[307] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[313] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[319] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
[325] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[331] "subtype3" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
[337] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[343] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[349] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[355] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[361] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[367] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[373] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[379] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[385] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[391] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[397] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[403] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[409] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[415] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[421] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[427] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[433] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[439] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[445] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[451] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[457] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[463] "subtype3" "subtype3" "subtype3" "subtype3"
  [1] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
 [13] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
 [19] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [25] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [31] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
 [37] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
 [43] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
 [49] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
 [55] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
 [61] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
 [67] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
 [73] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
 [79] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [85] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
 [91] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
 [97] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[103] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[109] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[115] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[121] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[133] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[139] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[151] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[157] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[163] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[169] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[175] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[181] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[193] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[205] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[211] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[217] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[223] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[229] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[235] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[241] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[247] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[253] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[265] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[271] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[277] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[283] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[289] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[295] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[301] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[307] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[313] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[319] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
[325] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[331] "subtype3" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
[337] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[343] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[349] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[355] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[361] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[367] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[373] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[379] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[385] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[391] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[397] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[403] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[409] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[415] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[421] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[427] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[433] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[439] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[445] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[451] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[457] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[463] "subtype3" "subtype3" "subtype3" "subtype3"
  [1] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
 [13] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
 [19] "subtype2" "subtype2" "subtype1" "subtype2" "subtype2" "subtype3"
 [25] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
 [31] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
 [37] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
 [43] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
 [49] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype2"
 [55] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
 [61] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
 [67] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
 [73] "subtype3" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
 [79] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
 [85] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
 [91] "subtype2" "subtype2" "subtype1" "subtype3" "subtype2" "subtype1"
 [97] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[103] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[109] "subtype3" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[115] "subtype2" "subtype3" "subtype2" "subtype2" "subtype3" "subtype2"
[121] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[127] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[133] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype3"
[139] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[145] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
[151] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[157] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[163] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[169] "subtype3" "subtype3" "subtype3" "subtype3" "subtype2" "subtype3"
[175] "subtype3" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[181] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[187] "subtype3" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[193] "subtype2" "subtype1" "subtype2" "subtype2" "subtype3" "subtype3"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[205] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[211] "subtype3" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[217] "subtype3" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[223] "subtype3" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[229] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[235] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[241] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[247] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[253] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[259] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[265] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype3"
[271] "subtype3" "subtype2" "subtype2" "subtype3" "subtype1" "subtype2"
[277] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[283] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype1"
[289] "subtype2" "subtype3" "subtype2" "subtype3" "subtype2" "subtype3"
[295] "subtype1" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[301] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype2"
[307] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[313] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[319] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype3"
[325] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[331] "subtype3" "subtype3" "subtype1" "subtype2" "subtype2" "subtype2"
[337] "subtype3" "subtype1" "subtype2" "subtype3" "subtype2" "subtype2"
[343] "subtype2" "subtype3" "subtype3" "subtype2" "subtype2" "subtype2"
[349] "subtype2" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
[355] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[361] "subtype2" "subtype3" "subtype3" "subtype2" "subtype3" "subtype2"
[367] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype2"
[373] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[379] "subtype3" "subtype2" "subtype2" "subtype3" "subtype3" "subtype3"
[385] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[391] "subtype2" "subtype2" "subtype3" "subtype2" "subtype3" "subtype2"
[397] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[403] "subtype2" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[409] "subtype3" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[415] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype3"
[421] "subtype3" "subtype3" "subtype3" "subtype3" "subtype3" "subtype3"
[427] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype3"
[433] "subtype3" "subtype3" "subtype1" "subtype3" "subtype3" "subtype3"
[439] "subtype1" "subtype3" "subtype3" "subtype3" "subtype3" "subtype1"
[445] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[451] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype3"
[457] "subtype3" "subtype3" "subtype2" "subtype3" "subtype3" "subtype3"
[463] "subtype3" "subtype3" "subtype3" "subtype3"
D10V2, continuous
          vv
clus       ENDOMETRIOID ENDOMETRIAL ADENOCARCINOMA
  subtype1                                      24
  subtype2                                     213
  subtype3                                     125
          vv
clus       MIXED SEROUS AND ENDOMETRIOID SEROUS ENDOMETRIAL ADENOCARCINOMA
  subtype1                             0                                 0
  subtype2                             3                                 4
  subtype3                            15                                85
D10V3, multiclass
D10V4, binary
          cls
clus         0   1
  subtype1  10  14
  subtype2  59 161
  subtype3  62 163
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   10   14
  subtype2   59  161
  subtype3   62  163
     clus
vv    subtype1 subtype2 subtype3
  NO        10       59       62
  YES       14      161      163
          vv
clus        R0  R1  R2  RX
  subtype1  16   2   0   1
  subtype2 150  10   5  15
  subtype3 156  12  10  10
D10V5, multiclass

Clustering(11) Variable = MIRSEQ_MATURE_CNMF
D11V1, survival
          sevent
clus2        0   1
  subtype1 123  22
  subtype2 105   7
  subtype3  69  13
subtype1 subtype2 subtype3 
     145      112       82 
subtype1 subtype2 subtype3 
      22        7       13 
$subtype1
TCGA-A5-A0G1 TCGA-A5-A1OF TCGA-A5-A1OG TCGA-A5-A2K2 TCGA-A5-A2K3 TCGA-A5-A2K4 
      106.88         7.92        11.44        91.00        46.32        28.64 
TCGA-A5-A2K5 TCGA-A5-A2K7 TCGA-A5-A3LP TCGA-AJ-A23M TCGA-AJ-A23N TCGA-AJ-A2QM 
        5.29         5.13        14.96         1.02         1.08         1.02 
TCGA-AJ-A2QO TCGA-AJ-A3BD TCGA-AJ-A3BF TCGA-AJ-A3BG TCGA-AJ-A3EJ TCGA-AJ-A3EK 
        2.99         0.49         1.12         1.02         1.64         2.10 
TCGA-AJ-A3EM TCGA-AJ-A3IA TCGA-AJ-A3NE TCGA-AJ-A3NH TCGA-AJ-A3OL TCGA-AJ-A3TW 
        1.64         0.92         2.56         0.76         1.87         1.68 
TCGA-AP-A059 TCGA-AP-A0LF TCGA-AP-A0LO TCGA-AP-A0LS TCGA-AP-A1DH TCGA-AP-A1DO 
        8.22         3.39        33.40        63.06        71.67        31.30 
TCGA-AP-A1DR TCGA-AP-A1DV TCGA-AP-A1E4 TCGA-AP-A3K1 TCGA-AW-A1PO TCGA-AX-A064 
       49.15         6.71        16.24        18.25         0.56        34.98 
TCGA-AX-A06D TCGA-AX-A1C5 TCGA-AX-A1C7 TCGA-AX-A1CA TCGA-AX-A1CF TCGA-AX-A1CI 
       12.26        19.20        16.93        20.28        76.83        72.56 
TCGA-AX-A2H2 TCGA-AX-A2H4 TCGA-AX-A2H5 TCGA-AX-A2H8 TCGA-AX-A2HA TCGA-AX-A2HC 
        4.77        30.08        71.24        61.18        68.71        33.40 
TCGA-AX-A2HD TCGA-AX-A2HF TCGA-AX-A2HG TCGA-AX-A2HH TCGA-AX-A3FS TCGA-AX-A3FT 
       40.50        16.08        21.70        17.72         0.23         0.10 
TCGA-AX-A3FZ TCGA-AX-A3G3 TCGA-AX-A3G7 TCGA-AX-A3G8 TCGA-AX-A3G9 TCGA-AX-A3GI 
        0.20         0.03         0.23         1.18         8.35         0.13 
TCGA-B5-A0JU TCGA-B5-A0K8 TCGA-B5-A11H TCGA-B5-A1MR TCGA-B5-A1MS TCGA-B5-A1MW 
       48.76        17.82        88.34       191.84       102.05        14.70 
TCGA-B5-A3FC TCGA-B5-A3S1 TCGA-BG-A0YV TCGA-BG-A18C TCGA-BG-A221 TCGA-BG-A222 
       62.14         5.00        12.56        15.45         1.81         9.57 
TCGA-BG-A2AE TCGA-BG-A3EW TCGA-BG-A3PP TCGA-BK-A0CC TCGA-BK-A139 TCGA-BK-A4ZD 
        0.53        11.31         6.81        10.22        10.16         6.94 
TCGA-BS-A0V8 TCGA-D1-A15V TCGA-D1-A15X TCGA-D1-A15Z TCGA-D1-A167 TCGA-D1-A16I 
       49.55        39.48        29.88         1.91        15.72        11.47 
TCGA-D1-A16J TCGA-D1-A16S TCGA-D1-A16Y TCGA-D1-A177 TCGA-D1-A179 TCGA-D1-A17K 
       29.88        18.67        17.49        18.02         6.77        28.08 
TCGA-D1-A1NU TCGA-D1-A2G0 TCGA-D1-A3DA TCGA-D1-A3DG TCGA-D1-A3DH TCGA-DI-A1NN 
       13.22         3.52         0.26         4.27         4.11        35.38 
TCGA-DI-A1NO TCGA-DI-A2QT TCGA-E6-A1LX TCGA-E6-A1LZ TCGA-E6-A1M0 TCGA-EO-A1Y5 
        9.37        12.39        23.38        48.36        17.03        10.92 
TCGA-EO-A1Y8 TCGA-EO-A22S TCGA-EO-A22U TCGA-EO-A2CH TCGA-EO-A3AS TCGA-EO-A3AU 
       10.78        35.05        27.12        19.40        34.39        19.36 
TCGA-EO-A3AY TCGA-EY-A1G7 TCGA-EY-A1G8 TCGA-EY-A1GC TCGA-EY-A1GJ TCGA-EY-A1GL 
       12.89         6.21        14.96         4.54        23.90        13.94 
TCGA-EY-A1GO TCGA-EY-A1GR TCGA-EY-A1GS TCGA-EY-A1GT TCGA-EY-A1GV TCGA-EY-A212 
       19.27        17.62        15.09        16.11        15.81         3.58 
TCGA-EY-A214 TCGA-EY-A215 TCGA-EY-A2OM TCGA-EY-A2ON TCGA-EY-A2OO TCGA-EY-A2OP 
       14.40        18.87        22.82        13.45        45.76        31.00 
TCGA-EY-A3L3 TCGA-EY-A3QX TCGA-EY-A4KR TCGA-EY-A547 TCGA-EY-A548 TCGA-EY-A54A 
        8.48        13.84         6.44        17.88         2.14         3.72 
TCGA-FI-A2CX TCGA-FI-A2CY TCGA-FI-A2D2 TCGA-FI-A2D4 TCGA-FI-A2D5 TCGA-FI-A2D6 
       40.01        34.98        36.00         7.96        14.01         8.98 
TCGA-FI-A2EU TCGA-FI-A2EW TCGA-FI-A2EX TCGA-FI-A2EY TCGA-H5-A2HR TCGA-K6-A3WQ 
       97.08        59.01         9.07        29.03         1.74         6.67 
TCGA-KJ-A3U4 
        2.40 

$subtype2
TCGA-A5-A0GB TCGA-A5-A0GQ TCGA-A5-A1OK TCGA-AJ-A2QK TCGA-AJ-A2QL TCGA-AJ-A3BI 
       32.78        38.37         7.99         0.39        19.79         2.01 
TCGA-AJ-A3BK TCGA-AJ-A3I9 TCGA-AJ-A3NC TCGA-AJ-A3OK TCGA-AP-A05O TCGA-AP-A1DK 
        1.68         1.28         6.90         4.67        12.20        60.36 
TCGA-AP-A1DP TCGA-AP-A1E1 TCGA-AX-A06H TCGA-AX-A06L TCGA-AX-A1C4 TCGA-AX-A1C9 
       35.54        10.42        27.39        60.62        13.28        15.25 
TCGA-AX-A1CE TCGA-AX-A1CJ TCGA-AX-A1CK TCGA-AX-A2H7 TCGA-AX-A3FW TCGA-AX-A3FX 
       20.05        54.08        67.46        33.53         0.33         0.13 
TCGA-AX-A3G1 TCGA-B5-A0JR TCGA-B5-A0JT TCGA-B5-A0JX TCGA-B5-A0KB TCGA-B5-A11G 
       20.52        56.91        43.13        44.71         4.08       113.33 
TCGA-B5-A11J TCGA-B5-A11M TCGA-B5-A11N TCGA-B5-A11P TCGA-B5-A11Q TCGA-B5-A11R 
       54.44        44.75        43.96        36.82        32.05        33.50 
TCGA-B5-A11S TCGA-B5-A11W TCGA-B5-A11Z TCGA-B5-A121 TCGA-B5-A1MV TCGA-B5-A1MZ 
       27.32        19.46        17.36        16.57        14.40        15.29 
TCGA-BG-A0MA TCGA-BG-A0MH TCGA-BG-A0MK TCGA-BG-A0VV TCGA-BG-A0VW TCGA-BG-A0VX 
       10.72        44.09        43.30         8.55         4.31        16.11 
TCGA-BG-A186 TCGA-BG-A187 TCGA-BG-A18A TCGA-BG-A18B TCGA-BG-A2L7 TCGA-BK-A0CA 
       13.78        14.73        14.01        15.45         5.82        34.98 
TCGA-BK-A13B TCGA-BK-A13C TCGA-BK-A56F TCGA-BS-A0T9 TCGA-BS-A0V6 TCGA-D1-A0ZO 
       31.76        24.99         6.58        46.95        62.79        19.79 
TCGA-D1-A102 TCGA-D1-A103 TCGA-D1-A15W TCGA-D1-A161 TCGA-D1-A162 TCGA-D1-A165 
        4.44        21.99        30.08        29.33        37.64         0.66 
TCGA-D1-A169 TCGA-D1-A16B TCGA-D1-A16D TCGA-D1-A16E TCGA-D1-A16F TCGA-D1-A16N 
       37.32        36.36        37.51        36.79         2.63        31.07 
TCGA-D1-A16O TCGA-D1-A16Q TCGA-D1-A16R TCGA-D1-A16V TCGA-D1-A16X TCGA-D1-A176 
       33.60        10.65         0.69         1.41         3.65        30.15 
TCGA-D1-A17A TCGA-D1-A17B TCGA-D1-A17D TCGA-D1-A17F TCGA-D1-A17L TCGA-D1-A17N 
        1.58         6.97        30.44         1.28        26.37         1.51 
TCGA-D1-A17Q TCGA-D1-A17S TCGA-D1-A17T TCGA-D1-A17U TCGA-D1-A1NS TCGA-D1-A1NX 
        1.78        24.30         2.30        22.92         1.41        18.25 
TCGA-D1-A1NZ TCGA-D1-A1O0 TCGA-D1-A1O5 TCGA-D1-A1O7 TCGA-D1-A2G5 TCGA-DI-A1BY 
       18.02         2.07        15.06         1.05        41.42        36.62 
TCGA-E6-A2P9 TCGA-EC-A1NJ TCGA-EC-A24G TCGA-EO-A1Y7 TCGA-EO-A22Y TCGA-EY-A1GE 
        6.64        16.01        16.77         7.99        25.02        24.36 
TCGA-EY-A1GF TCGA-EY-A1GH TCGA-EY-A1GI TCGA-EY-A1GK TCGA-EY-A1GU TCGA-EY-A1GW 
       27.16        23.31        23.31        22.78        12.43         8.55 
TCGA-EY-A1GX TCGA-EY-A1H0 TCGA-EY-A549 TCGA-FI-A2F4 
        6.48        19.33         6.97        28.93 

$subtype3
TCGA-A5-A0GG TCGA-A5-A0GN TCGA-A5-A0GR TCGA-A5-A1OH TCGA-A5-A1OJ TCGA-A5-A3LO 
       87.32        60.53        36.82        36.30         9.60         7.33 
TCGA-AJ-A23O TCGA-AJ-A2QN TCGA-AJ-A3EL TCGA-AJ-A3NF TCGA-AJ-A3NG TCGA-AJ-A3OJ 
        1.97         2.01         2.14         1.35         1.71         1.94 
TCGA-AJ-A3QS TCGA-AP-A0LM TCGA-AP-A1DM TCGA-AP-A1DQ TCGA-AP-A1E0 TCGA-AP-A1E3 
        1.84        27.12        55.89        41.92        30.90        27.85 
TCGA-AX-A0IZ TCGA-AX-A1C8 TCGA-AX-A1CC TCGA-AX-A1CN TCGA-AX-A1CP TCGA-AX-A1CR 
       43.82        13.55        12.43        25.12        36.39        11.08 
TCGA-AX-A2HJ TCGA-AX-A2HK TCGA-AX-A2IN TCGA-AX-A2IO TCGA-AX-A3G4 TCGA-AX-A3GB 
       27.32         2.96        31.10        38.66         0.13        14.47 
TCGA-B5-A11L TCGA-B5-A11O TCGA-B5-A11U TCGA-B5-A1MU TCGA-B5-A1MX TCGA-B5-A1MY 
       45.90        40.93        16.73        50.86        11.67        11.87 
TCGA-B5-A1N2 TCGA-BK-A26L TCGA-BS-A0UA TCGA-BS-A0V4 TCGA-BS-A0V7 TCGA-BS-A0VI 
       12.79        24.13        88.31        59.51        63.58        63.16 
TCGA-D1-A0ZN TCGA-D1-A0ZQ TCGA-D1-A0ZS TCGA-D1-A160 TCGA-D1-A163 TCGA-D1-A168 
       16.83         8.55         4.83         3.68        32.58        36.10 
TCGA-D1-A16G TCGA-D1-A174 TCGA-D1-A175 TCGA-D1-A17C TCGA-D1-A17H TCGA-D1-A17M 
       27.42        19.53         6.64         0.99        28.01        10.22 
TCGA-D1-A17R TCGA-D1-A1NW TCGA-D1-A1NY TCGA-D1-A1O8 TCGA-D1-A2G6 TCGA-D1-A2G7 
       11.15         0.72        16.87         3.95         8.48        44.88 
TCGA-DI-A0WH TCGA-DI-A1BU TCGA-DI-A1C3 TCGA-DI-A2QU TCGA-DI-A2QY TCGA-E6-A2P8 
       16.27        39.29        24.30        31.10        91.96         2.37 
TCGA-EC-A1QX TCGA-EO-A22R TCGA-EO-A22T TCGA-EO-A22X TCGA-EO-A2CG TCGA-EY-A1GD 
        7.33        31.96        33.01        32.25        32.02         8.15 
TCGA-EY-A1GM TCGA-EY-A1GP TCGA-EY-A1GQ TCGA-EY-A210 TCGA-EY-A2OQ TCGA-FI-A2D0 
        6.87        18.84        17.88        12.59        29.06        33.99 
TCGA-FI-A2F8 TCGA-FI-A2F9 TCGA-FI-A3PV TCGA-PG-A5BC 
       25.02        26.01        41.06        10.82 

subtype1 subtype2 subtype3 
    0.03     0.13     0.13 
subtype1 subtype2 subtype3 
  191.84   113.33    91.96 
subtype1 subtype2 subtype3 
  14.010   19.395   21.830 
[1] "0.0 - 191.8 (14.0)" "0.1 - 113.3 (19.4)" "0.1 - 92.0 (21.8)" 
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
 [13] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
 [19] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
 [25] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
 [31] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [37] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
 [43] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
 [49] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
 [61] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
 [67] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
 [73] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
 [79] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
 [85] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [91] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [97] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[103] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[109] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[115] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[121] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[127] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[133] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[139] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[145] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[151] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[157] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[163] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[169] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[175] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[181] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[187] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[193] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[205] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[211] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[217] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[223] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[229] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[235] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[241] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[247] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[253] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[259] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[265] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[271] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[277] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[283] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[289] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[295] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[301] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[307] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[313] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[319] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[325] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[331] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[337] "subtype1" "subtype1" "subtype3"
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
 [13] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
 [19] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
 [25] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
 [31] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [37] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
 [43] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
 [49] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
 [61] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
 [67] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
 [73] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
 [79] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
 [85] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [91] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [97] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[103] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[109] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[115] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[121] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[127] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[133] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[139] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[145] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[151] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[157] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[163] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[169] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[175] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[181] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[187] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[193] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[205] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[211] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[217] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[223] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[229] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[235] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[241] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[247] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[253] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[259] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[265] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[271] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[277] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[283] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[289] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[295] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[301] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[307] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[313] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[319] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[325] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[331] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[337] "subtype1" "subtype1" "subtype3"
  [1] "subtype1" "subtype2" "subtype3" "subtype3" "subtype2" "subtype3"
  [7] "subtype1" "subtype1" "subtype3" "subtype3" "subtype2" "subtype1"
 [13] "subtype1" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
 [19] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype1"
 [25] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype2"
 [31] "subtype2" "subtype1" "subtype1" "subtype3" "subtype1" "subtype2"
 [37] "subtype1" "subtype2" "subtype1" "subtype3" "subtype3" "subtype1"
 [43] "subtype3" "subtype2" "subtype1" "subtype3" "subtype1" "subtype1"
 [49] "subtype2" "subtype1" "subtype3" "subtype1" "subtype1" "subtype1"
 [55] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype1"
 [61] "subtype1" "subtype3" "subtype2" "subtype3" "subtype1" "subtype1"
 [67] "subtype1" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
 [73] "subtype2" "subtype1" "subtype1" "subtype3" "subtype2" "subtype1"
 [79] "subtype3" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
 [85] "subtype3" "subtype3" "subtype3" "subtype1" "subtype1" "subtype1"
 [91] "subtype2" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
 [97] "subtype1" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
[103] "subtype1" "subtype1" "subtype2" "subtype2" "subtype1" "subtype2"
[109] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[115] "subtype1" "subtype2" "subtype2" "subtype1" "subtype2" "subtype1"
[121] "subtype2" "subtype2" "subtype1" "subtype2" "subtype3" "subtype2"
[127] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[133] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype1"
[139] "subtype3" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[145] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype2"
[151] "subtype2" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[157] "subtype2" "subtype2" "subtype1" "subtype1" "subtype1" "subtype1"
[163] "subtype2" "subtype1" "subtype1" "subtype2" "subtype1" "subtype1"
[169] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype2"
[175] "subtype3" "subtype3" "subtype2" "subtype3" "subtype1" "subtype3"
[181] "subtype3" "subtype2" "subtype3" "subtype3" "subtype2" "subtype2"
[187] "subtype1" "subtype2" "subtype1" "subtype1" "subtype3" "subtype2"
[193] "subtype2" "subtype3" "subtype2" "subtype1" "subtype3" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[205] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype1"
[211] "subtype2" "subtype2" "subtype1" "subtype3" "subtype3" "subtype2"
[217] "subtype1" "subtype1" "subtype2" "subtype2" "subtype3" "subtype2"
[223] "subtype2" "subtype3" "subtype1" "subtype2" "subtype3" "subtype2"
[229] "subtype2" "subtype3" "subtype2" "subtype2" "subtype2" "subtype2"
[235] "subtype1" "subtype3" "subtype2" "subtype3" "subtype2" "subtype2"
[241] "subtype2" "subtype2" "subtype3" "subtype1" "subtype2" "subtype3"
[247] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype3"
[253] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[259] "subtype3" "subtype1" "subtype1" "subtype1" "subtype3" "subtype2"
[265] "subtype2" "subtype3" "subtype2" "subtype1" "subtype2" "subtype1"
[271] "subtype3" "subtype1" "subtype3" "subtype1" "subtype3" "subtype2"
[277] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[283] "subtype1" "subtype1" "subtype3" "subtype2" "subtype2" "subtype2"
[289] "subtype2" "subtype1" "subtype2" "subtype1" "subtype3" "subtype1"
[295] "subtype3" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
[301] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype1"
[307] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[313] "subtype3" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[319] "subtype2" "subtype1" "subtype1" "subtype1" "subtype3" "subtype1"
[325] "subtype1" "subtype1" "subtype1" "subtype1" "subtype1" "subtype1"
[331] "subtype1" "subtype2" "subtype3" "subtype3" "subtype3" "subtype1"
[337] "subtype1" "subtype1" "subtype3"
D11V2, continuous
          vv
clus       ENDOMETRIOID ENDOMETRIAL ADENOCARCINOMA
  subtype1                                      85
  subtype2                                     109
  subtype3                                      55
          vv
clus       MIXED SEROUS AND ENDOMETRIOID SEROUS ENDOMETRIAL ADENOCARCINOMA
  subtype1                             8                                55
  subtype2                             1                                 2
  subtype3                             7                                20
D11V3, multiclass
D11V4, binary
          cls
clus         0   1
  subtype1  32 116
  subtype2  27  85
  subtype3  23  59
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   32  116
  subtype2   27   85
  subtype3   23   59
     clus
vv    subtype1 subtype2 subtype3
  NO        32       27       23
  YES      116       85       59
          vv
clus       R0 R1 R2 RX
  subtype1 95  9 10  6
  subtype2 73  4  2 10
  subtype3 63  4  0  4
D11V5, multiclass

Clustering(12) Variable = MIRSEQ_MATURE_CHIERARCHICAL
D12V1, survival
          sevent
clus2        0   1
  subtype1  77  11
  subtype2 125   7
  subtype3  77  17
  subtype4  18   7
subtype1 subtype2 subtype3 subtype4 
      88      132       94       25 
subtype1 subtype2 subtype3 subtype4 
      11        7       17        7 
$subtype1
TCGA-A5-A0GR TCGA-A5-A1OH TCGA-A5-A2K7 TCGA-A5-A3LO TCGA-AJ-A23N TCGA-AJ-A23O 
       36.82        36.30         5.13         7.33         1.08         1.97 
TCGA-AJ-A3EK TCGA-AJ-A3EL TCGA-AJ-A3EM TCGA-AJ-A3IA TCGA-AJ-A3NE TCGA-AJ-A3NF 
        2.10         2.14         1.64         0.92         2.56         1.35 
TCGA-AJ-A3OJ TCGA-AJ-A3QS TCGA-AP-A0LM TCGA-AP-A1DM TCGA-AP-A1DQ TCGA-AP-A1DR 
        1.94         1.84        27.12        55.89        41.92        49.15 
TCGA-AP-A1E3 TCGA-AP-A1E4 TCGA-AX-A064 TCGA-AX-A0IZ TCGA-AX-A1C8 TCGA-AX-A1CC 
       27.85        16.24        34.98        43.82        13.55        12.43 
TCGA-AX-A1CF TCGA-AX-A1CI TCGA-AX-A1CP TCGA-AX-A2HF TCGA-AX-A2HK TCGA-AX-A2IN 
       76.83        72.56        36.39        16.08         2.96        31.10 
TCGA-AX-A2IO TCGA-AX-A3FT TCGA-AX-A3G4 TCGA-AX-A3G9 TCGA-B5-A11U TCGA-B5-A1MU 
       38.66         0.10         0.13         8.35        16.73        50.86 
TCGA-B5-A1MY TCGA-B5-A1N2 TCGA-BG-A3PP TCGA-BK-A0CC TCGA-BK-A139 TCGA-BK-A26L 
       11.87        12.79         6.81        10.22        10.16        24.13 
TCGA-BK-A4ZD TCGA-BS-A0V4 TCGA-BS-A0VI TCGA-D1-A0ZS TCGA-D1-A160 TCGA-D1-A163 
        6.94        59.51        63.16         4.83         3.68        32.58 
TCGA-D1-A167 TCGA-D1-A168 TCGA-D1-A16G TCGA-D1-A16J TCGA-D1-A177 TCGA-D1-A17H 
       15.72        36.10        27.42        29.88        18.02        28.01 
TCGA-D1-A1NW TCGA-D1-A1NY TCGA-D1-A2G6 TCGA-D1-A2G7 TCGA-D1-A3DG TCGA-D1-A3DH 
        0.72        16.87         8.48        44.88         4.27         4.11 
TCGA-DI-A0WH TCGA-DI-A1BU TCGA-DI-A2QY TCGA-E6-A1LX TCGA-E6-A2P8 TCGA-EC-A1QX 
       16.27        39.29        91.96        23.38         2.37         7.33 
TCGA-EO-A22R TCGA-EO-A22S TCGA-EO-A22T TCGA-EO-A22X TCGA-EO-A2CG TCGA-EO-A3AS 
       31.96        35.05        33.01        32.25        32.02        34.39 
TCGA-EO-A3AU TCGA-EO-A3AY TCGA-EY-A1GM TCGA-EY-A1GO TCGA-EY-A1GP TCGA-EY-A1GQ 
       19.36        12.89         6.87        19.27        18.84        17.88 
TCGA-EY-A1GT TCGA-EY-A210 TCGA-EY-A2OQ TCGA-EY-A3QX TCGA-FI-A2D0 TCGA-FI-A2D5 
       16.11        12.59        29.06        13.84        33.99        14.01 
TCGA-FI-A2F8 TCGA-FI-A2F9 TCGA-FI-A3PV TCGA-PG-A5BC 
       25.02        26.01        41.06        10.82 

$subtype2
TCGA-A5-A0GG TCGA-A5-A0GQ TCGA-A5-A1OJ TCGA-A5-A1OK TCGA-A5-A2K5 TCGA-AJ-A2QK 
       87.32        38.37         9.60         7.99         5.29         0.39 
TCGA-AJ-A2QL TCGA-AJ-A2QN TCGA-AJ-A3BI TCGA-AJ-A3BK TCGA-AJ-A3I9 TCGA-AJ-A3NC 
       19.79         2.01         2.01         1.68         1.28         6.90 
TCGA-AJ-A3NG TCGA-AJ-A3OK TCGA-AP-A05O TCGA-AP-A0LS TCGA-AP-A1DH TCGA-AP-A1DK 
        1.71         4.67        12.20        63.06        71.67        60.36 
TCGA-AP-A1DP TCGA-AP-A1DV TCGA-AP-A1E0 TCGA-AP-A1E1 TCGA-AX-A06H TCGA-AX-A06L 
       35.54         6.71        30.90        10.42        27.39        60.62 
TCGA-AX-A1C4 TCGA-AX-A1C9 TCGA-AX-A1CE TCGA-AX-A1CJ TCGA-AX-A1CK TCGA-AX-A2H7 
       13.28        15.25        20.05        54.08        67.46        33.53 
TCGA-AX-A2HJ TCGA-AX-A3FW TCGA-AX-A3FX TCGA-AX-A3G1 TCGA-AX-A3GB TCGA-B5-A0JR 
       27.32         0.33         0.13        20.52        14.47        56.91 
TCGA-B5-A0JT TCGA-B5-A0JX TCGA-B5-A0KB TCGA-B5-A11J TCGA-B5-A11M TCGA-B5-A11N 
       43.13        44.71         4.08        54.44        44.75        43.96 
TCGA-B5-A11O TCGA-B5-A11P TCGA-B5-A11Q TCGA-B5-A11R TCGA-B5-A11S TCGA-B5-A11W 
       40.93        36.82        32.05        33.50        27.32        19.46 
TCGA-B5-A11Z TCGA-B5-A121 TCGA-B5-A1MV TCGA-B5-A1MX TCGA-B5-A1MZ TCGA-B5-A3FC 
       17.36        16.57        14.40        11.67        15.29        62.14 
TCGA-BG-A0MA TCGA-BG-A0MH TCGA-BG-A0MK TCGA-BG-A0VV TCGA-BG-A0VW TCGA-BG-A0VX 
       10.72        44.09        43.30         8.55         4.31        16.11 
TCGA-BG-A186 TCGA-BG-A187 TCGA-BG-A18A TCGA-BG-A18B TCGA-BG-A2L7 TCGA-BK-A0CA 
       13.78        14.73        14.01        15.45         5.82        34.98 
TCGA-BK-A13B TCGA-BK-A13C TCGA-BK-A56F TCGA-BS-A0UA TCGA-BS-A0V6 TCGA-BS-A0V7 
       31.76        24.99         6.58        88.31        62.79        63.58 
TCGA-D1-A0ZO TCGA-D1-A0ZQ TCGA-D1-A102 TCGA-D1-A103 TCGA-D1-A15W TCGA-D1-A161 
       19.79         8.55         4.44        21.99        30.08        29.33 
TCGA-D1-A162 TCGA-D1-A165 TCGA-D1-A169 TCGA-D1-A16B TCGA-D1-A16D TCGA-D1-A16E 
       37.64         0.66        37.32        36.36        37.51        36.79 
TCGA-D1-A16F TCGA-D1-A16N TCGA-D1-A16O TCGA-D1-A16Q TCGA-D1-A16R TCGA-D1-A16V 
        2.63        31.07        33.60        10.65         0.69         1.41 
TCGA-D1-A16X TCGA-D1-A174 TCGA-D1-A175 TCGA-D1-A176 TCGA-D1-A17A TCGA-D1-A17B 
        3.65        19.53         6.64        30.15         1.58         6.97 
TCGA-D1-A17D TCGA-D1-A17F TCGA-D1-A17L TCGA-D1-A17N TCGA-D1-A17Q TCGA-D1-A17S 
       30.44         1.28        26.37         1.51         1.78        24.30 
TCGA-D1-A17T TCGA-D1-A17U TCGA-D1-A1NS TCGA-D1-A1NX TCGA-D1-A1NZ TCGA-D1-A1O0 
        2.30        22.92         1.41        18.25        18.02         2.07 
TCGA-D1-A1O5 TCGA-D1-A1O7 TCGA-D1-A2G5 TCGA-DI-A1BY TCGA-DI-A1C3 TCGA-E6-A1M0 
       15.06         1.05        41.42        36.62        24.30        17.03 
TCGA-E6-A2P9 TCGA-EC-A1NJ TCGA-EC-A24G TCGA-EO-A1Y7 TCGA-EO-A22Y TCGA-EY-A1GE 
        6.64        16.01        16.77         7.99        25.02        24.36 
TCGA-EY-A1GF TCGA-EY-A1GH TCGA-EY-A1GI TCGA-EY-A1GK TCGA-EY-A1GW TCGA-EY-A1GX 
       27.16        23.31        23.31        22.78         8.55         6.48 
TCGA-EY-A1H0 TCGA-EY-A215 TCGA-EY-A547 TCGA-EY-A549 TCGA-FI-A2D4 TCGA-FI-A2F4 
       19.33        18.87        17.88         6.97         7.96        28.93 

$subtype3
TCGA-A5-A0G1 TCGA-A5-A0GB TCGA-A5-A1OF TCGA-A5-A1OG TCGA-A5-A2K2 TCGA-A5-A2K3 
      106.88        32.78         7.92        11.44        91.00        46.32 
TCGA-A5-A2K4 TCGA-A5-A3LP TCGA-AJ-A23M TCGA-AJ-A2QM TCGA-AJ-A2QO TCGA-AJ-A3BD 
       28.64        14.96         1.02         1.02         2.99         0.49 
TCGA-AJ-A3BF TCGA-AJ-A3BG TCGA-AJ-A3EJ TCGA-AJ-A3NH TCGA-AJ-A3OL TCGA-AJ-A3TW 
        1.12         1.02         1.64         0.76         1.87         1.68 
TCGA-AP-A059 TCGA-AP-A0LF TCGA-AP-A1DO TCGA-AP-A3K1 TCGA-AX-A1C5 TCGA-AX-A1C7 
        8.22         3.39        31.30        18.25        19.20        16.93 
TCGA-AX-A1CA TCGA-AX-A1CR TCGA-AX-A2H2 TCGA-AX-A2H4 TCGA-AX-A2H5 TCGA-AX-A2H8 
       20.28        11.08         4.77        30.08        71.24        61.18 
TCGA-AX-A2HA TCGA-AX-A2HD TCGA-AX-A2HG TCGA-AX-A2HH TCGA-AX-A3G3 TCGA-AX-A3G8 
       68.71        40.50        21.70        17.72         0.03         1.18 
TCGA-AX-A3GI TCGA-B5-A0JU TCGA-B5-A0K8 TCGA-B5-A11G TCGA-B5-A11H TCGA-B5-A1MR 
        0.13        48.76        17.82       113.33        88.34       191.84 
TCGA-B5-A1MS TCGA-B5-A1MW TCGA-B5-A3S1 TCGA-BG-A0YV TCGA-BG-A221 TCGA-BG-A222 
      102.05        14.70         5.00        12.56         1.81         9.57 
TCGA-BG-A2AE TCGA-BG-A3EW TCGA-D1-A15V TCGA-D1-A15X TCGA-D1-A16I TCGA-D1-A16S 
        0.53        11.31        39.48        29.88        11.47        18.67 
TCGA-D1-A16Y TCGA-D1-A179 TCGA-D1-A17K TCGA-D1-A1NU TCGA-D1-A2G0 TCGA-D1-A3DA 
       17.49         6.77        28.08        13.22         3.52         0.26 
TCGA-DI-A1NN TCGA-DI-A1NO TCGA-DI-A2QT TCGA-E6-A1LZ TCGA-EO-A1Y5 TCGA-EO-A1Y8 
       35.38         9.37        12.39        48.36        10.92        10.78 
TCGA-EO-A2CH TCGA-EY-A1G7 TCGA-EY-A1G8 TCGA-EY-A1GC TCGA-EY-A1GJ TCGA-EY-A1GR 
       19.40         6.21        14.96         4.54        23.90        17.62 
TCGA-EY-A1GS TCGA-EY-A1GU TCGA-EY-A1GV TCGA-EY-A212 TCGA-EY-A214 TCGA-EY-A2OM 
       15.09        12.43        15.81         3.58        14.40        22.82 
TCGA-EY-A2ON TCGA-EY-A2OO TCGA-EY-A2OP TCGA-EY-A3L3 TCGA-EY-A4KR TCGA-EY-A54A 
       13.45        45.76        31.00         8.48         6.44         3.72 
TCGA-FI-A2CX TCGA-FI-A2CY TCGA-FI-A2D2 TCGA-FI-A2EU TCGA-FI-A2EW TCGA-FI-A2EX 
       40.01        34.98        36.00        97.08        59.01         9.07 
TCGA-FI-A2EY TCGA-H5-A2HR TCGA-K6-A3WQ TCGA-KJ-A3U4 
       29.03         1.74         6.67         2.40 

$subtype4
TCGA-A5-A0GN TCGA-AP-A0LO TCGA-AW-A1PO TCGA-AX-A06D TCGA-AX-A1CN TCGA-AX-A2HC 
       60.53        33.40         0.56        12.26        25.12        33.40 
TCGA-AX-A3FS TCGA-AX-A3FZ TCGA-AX-A3G7 TCGA-B5-A11L TCGA-BG-A18C TCGA-BS-A0T9 
        0.23         0.20         0.23        45.90        15.45        46.95 
TCGA-BS-A0V8 TCGA-D1-A0ZN TCGA-D1-A15Z TCGA-D1-A17C TCGA-D1-A17M TCGA-D1-A17R 
       49.55        16.83         1.91         0.99        10.22        11.15 
TCGA-D1-A1O8 TCGA-DI-A2QU TCGA-EO-A22U TCGA-EY-A1GD TCGA-EY-A1GL TCGA-EY-A548 
        3.95        31.10        27.12         8.15        13.94         2.14 
TCGA-FI-A2D6 
        8.98 

subtype1 subtype2 subtype3 subtype4 
    0.10     0.13     0.03     0.20 
subtype1 subtype2 subtype3 subtype4 
   91.96    88.31   191.84    60.53 
subtype1 subtype2 subtype3 subtype4 
   16.80    18.56    14.55    12.26 
[1] "0.1 - 92.0 (16.8)"  "0.1 - 88.3 (18.6)"  "0.0 - 191.8 (14.6)"
[4] "0.2 - 60.5 (12.3)" 
  [1] "subtype3" "subtype3" "subtype2" "subtype4" "subtype2" "subtype1"
  [7] "subtype3" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
 [19] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
 [25] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
 [31] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
 [37] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
 [43] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
 [49] "subtype2" "subtype3" "subtype1" "subtype4" "subtype2" "subtype2"
 [55] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
 [61] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [67] "subtype4" "subtype1" "subtype4" "subtype2" "subtype2" "subtype1"
 [73] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
 [79] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
 [85] "subtype4" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
 [91] "subtype2" "subtype3" "subtype3" "subtype4" "subtype3" "subtype1"
 [97] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[103] "subtype4" "subtype1" "subtype2" "subtype2" "subtype4" "subtype2"
[109] "subtype3" "subtype1" "subtype4" "subtype3" "subtype1" "subtype2"
[115] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[121] "subtype2" "subtype3" "subtype3" "subtype2" "subtype4" "subtype2"
[127] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[133] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[139] "subtype1" "subtype2" "subtype3" "subtype2" "subtype1" "subtype2"
[145] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[151] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[157] "subtype2" "subtype2" "subtype4" "subtype3" "subtype3" "subtype3"
[163] "subtype2" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[169] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype4"
[175] "subtype2" "subtype1" "subtype2" "subtype2" "subtype4" "subtype1"
[181] "subtype4" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[187] "subtype3" "subtype2" "subtype3" "subtype4" "subtype1" "subtype2"
[193] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[205] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[211] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[217] "subtype1" "subtype3" "subtype2" "subtype2" "subtype4" "subtype2"
[223] "subtype2" "subtype1" "subtype3" "subtype2" "subtype4" "subtype2"
[229] "subtype2" "subtype4" "subtype2" "subtype2" "subtype2" "subtype2"
[235] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
[241] "subtype2" "subtype2" "subtype4" "subtype3" "subtype2" "subtype1"
[247] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[253] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype4"
[259] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[265] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[271] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype2"
[277] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[283] "subtype3" "subtype3" "subtype4" "subtype2" "subtype2" "subtype2"
[289] "subtype2" "subtype3" "subtype2" "subtype4" "subtype1" "subtype1"
[295] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[307] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[313] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype4"
[319] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[325] "subtype2" "subtype1" "subtype4" "subtype3" "subtype3" "subtype3"
[331] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[337] "subtype3" "subtype3" "subtype1"
  [1] "subtype3" "subtype3" "subtype2" "subtype4" "subtype2" "subtype1"
  [7] "subtype3" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
 [19] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
 [25] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
 [31] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
 [37] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
 [43] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
 [49] "subtype2" "subtype3" "subtype1" "subtype4" "subtype2" "subtype2"
 [55] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
 [61] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [67] "subtype4" "subtype1" "subtype4" "subtype2" "subtype2" "subtype1"
 [73] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
 [79] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
 [85] "subtype4" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
 [91] "subtype2" "subtype3" "subtype3" "subtype4" "subtype3" "subtype1"
 [97] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[103] "subtype4" "subtype1" "subtype2" "subtype2" "subtype4" "subtype2"
[109] "subtype3" "subtype1" "subtype4" "subtype3" "subtype1" "subtype2"
[115] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[121] "subtype2" "subtype3" "subtype3" "subtype2" "subtype4" "subtype2"
[127] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[133] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[139] "subtype1" "subtype2" "subtype3" "subtype2" "subtype1" "subtype2"
[145] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[151] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[157] "subtype2" "subtype2" "subtype4" "subtype3" "subtype3" "subtype3"
[163] "subtype2" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[169] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype4"
[175] "subtype2" "subtype1" "subtype2" "subtype2" "subtype4" "subtype1"
[181] "subtype4" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[187] "subtype3" "subtype2" "subtype3" "subtype4" "subtype1" "subtype2"
[193] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[205] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[211] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[217] "subtype1" "subtype3" "subtype2" "subtype2" "subtype4" "subtype2"
[223] "subtype2" "subtype1" "subtype3" "subtype2" "subtype4" "subtype2"
[229] "subtype2" "subtype4" "subtype2" "subtype2" "subtype2" "subtype2"
[235] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
[241] "subtype2" "subtype2" "subtype4" "subtype3" "subtype2" "subtype1"
[247] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[253] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype4"
[259] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[265] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[271] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype2"
[277] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[283] "subtype3" "subtype3" "subtype4" "subtype2" "subtype2" "subtype2"
[289] "subtype2" "subtype3" "subtype2" "subtype4" "subtype1" "subtype1"
[295] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[307] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[313] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype4"
[319] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[325] "subtype2" "subtype1" "subtype4" "subtype3" "subtype3" "subtype3"
[331] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[337] "subtype3" "subtype3" "subtype1"
  [1] "subtype3" "subtype3" "subtype2" "subtype4" "subtype2" "subtype1"
  [7] "subtype3" "subtype3" "subtype1" "subtype2" "subtype2" "subtype3"
 [13] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype3"
 [19] "subtype3" "subtype1" "subtype1" "subtype2" "subtype2" "subtype3"
 [25] "subtype2" "subtype3" "subtype3" "subtype3" "subtype3" "subtype2"
 [31] "subtype2" "subtype3" "subtype1" "subtype1" "subtype1" "subtype2"
 [37] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype3"
 [43] "subtype1" "subtype2" "subtype3" "subtype1" "subtype3" "subtype3"
 [49] "subtype2" "subtype3" "subtype1" "subtype4" "subtype2" "subtype2"
 [55] "subtype2" "subtype1" "subtype3" "subtype2" "subtype1" "subtype1"
 [61] "subtype2" "subtype2" "subtype2" "subtype1" "subtype1" "subtype3"
 [67] "subtype4" "subtype1" "subtype4" "subtype2" "subtype2" "subtype1"
 [73] "subtype2" "subtype3" "subtype3" "subtype1" "subtype2" "subtype3"
 [79] "subtype1" "subtype2" "subtype1" "subtype1" "subtype2" "subtype2"
 [85] "subtype4" "subtype1" "subtype3" "subtype3" "subtype3" "subtype3"
 [91] "subtype2" "subtype3" "subtype3" "subtype4" "subtype3" "subtype1"
 [97] "subtype3" "subtype3" "subtype2" "subtype1" "subtype1" "subtype1"
[103] "subtype4" "subtype1" "subtype2" "subtype2" "subtype4" "subtype2"
[109] "subtype3" "subtype1" "subtype4" "subtype3" "subtype1" "subtype2"
[115] "subtype3" "subtype2" "subtype2" "subtype3" "subtype2" "subtype3"
[121] "subtype2" "subtype3" "subtype3" "subtype2" "subtype4" "subtype2"
[127] "subtype2" "subtype2" "subtype2" "subtype2" "subtype2" "subtype2"
[133] "subtype1" "subtype2" "subtype2" "subtype2" "subtype3" "subtype3"
[139] "subtype1" "subtype2" "subtype3" "subtype2" "subtype1" "subtype2"
[145] "subtype1" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[151] "subtype2" "subtype2" "subtype2" "subtype3" "subtype2" "subtype2"
[157] "subtype2" "subtype2" "subtype4" "subtype3" "subtype3" "subtype3"
[163] "subtype2" "subtype3" "subtype1" "subtype2" "subtype1" "subtype1"
[169] "subtype2" "subtype2" "subtype1" "subtype1" "subtype2" "subtype4"
[175] "subtype2" "subtype1" "subtype2" "subtype2" "subtype4" "subtype1"
[181] "subtype4" "subtype2" "subtype2" "subtype1" "subtype2" "subtype2"
[187] "subtype3" "subtype2" "subtype3" "subtype4" "subtype1" "subtype2"
[193] "subtype2" "subtype1" "subtype2" "subtype1" "subtype1" "subtype2"
[199] "subtype2" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[205] "subtype1" "subtype2" "subtype2" "subtype2" "subtype2" "subtype3"
[211] "subtype2" "subtype2" "subtype3" "subtype2" "subtype2" "subtype2"
[217] "subtype1" "subtype3" "subtype2" "subtype2" "subtype4" "subtype2"
[223] "subtype2" "subtype1" "subtype3" "subtype2" "subtype4" "subtype2"
[229] "subtype2" "subtype4" "subtype2" "subtype2" "subtype2" "subtype2"
[235] "subtype3" "subtype1" "subtype2" "subtype1" "subtype2" "subtype2"
[241] "subtype2" "subtype2" "subtype4" "subtype3" "subtype2" "subtype1"
[247] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype1"
[253] "subtype2" "subtype2" "subtype3" "subtype3" "subtype3" "subtype4"
[259] "subtype1" "subtype1" "subtype3" "subtype2" "subtype1" "subtype2"
[265] "subtype2" "subtype1" "subtype2" "subtype3" "subtype2" "subtype3"
[271] "subtype1" "subtype1" "subtype1" "subtype4" "subtype1" "subtype2"
[277] "subtype1" "subtype3" "subtype1" "subtype1" "subtype1" "subtype3"
[283] "subtype3" "subtype3" "subtype4" "subtype2" "subtype2" "subtype2"
[289] "subtype2" "subtype3" "subtype2" "subtype4" "subtype1" "subtype1"
[295] "subtype1" "subtype1" "subtype3" "subtype3" "subtype1" "subtype3"
[301] "subtype3" "subtype2" "subtype2" "subtype2" "subtype1" "subtype3"
[307] "subtype3" "subtype2" "subtype3" "subtype3" "subtype3" "subtype3"
[313] "subtype1" "subtype3" "subtype1" "subtype3" "subtype2" "subtype4"
[319] "subtype2" "subtype3" "subtype3" "subtype3" "subtype1" "subtype3"
[325] "subtype2" "subtype1" "subtype4" "subtype3" "subtype3" "subtype3"
[331] "subtype3" "subtype2" "subtype1" "subtype1" "subtype1" "subtype3"
[337] "subtype3" "subtype3" "subtype1"
D12V2, continuous
          vv
clus       ENDOMETRIOID ENDOMETRIAL ADENOCARCINOMA
  subtype1                                      58
  subtype2                                     128
  subtype3                                      39
  subtype4                                      24
          vv
clus       MIXED SEROUS AND ENDOMETRIOID SEROUS ENDOMETRIAL ADENOCARCINOMA
  subtype1                             5                                26
  subtype2                             2                                 2
  subtype3                             9                                48
  subtype4                             0                                 1
D12V3, multiclass
D12V4, binary
          cls
clus        0  1
  subtype1 25 64
  subtype2 34 98
  subtype3 19 77
  subtype4  4 21
[1] "tbl2"
          cls
clus       [,1] [,2]
  subtype1   25   64
  subtype2   34   98
  subtype3   19   77
  subtype4    4   21
     clus
vv    subtype1 subtype2 subtype3 subtype4
  NO        25       34       19        4
  YES       64       98       77       21
          vv
clus       R0 R1 R2 RX
  subtype1 66  4  2  4
  subtype2 91  4  2 10
  subtype3 58  7  7  4
  subtype4 16  2  1  2
D12V5, multiclass
> q(save="no")
