Clinical Features	Time to Death		AGE		PATHOLOGY.T.STAGE		PATHOLOGY.N.STAGE		PATHOLOGY.M.STAGE		HISTOLOGICAL.TYPE		RADIATIONS.RADIATION.REGIMENINDICATION		NUMBERPACKYEARSSMOKED		NUMBER.OF.LYMPH.NODES	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q
1P GAIN MUTATION ANALYSIS	20 (29%)	48	0.27656	1	0.84965	1	0.78164	1	0.77415	1	0.8935	1	0.71185	1	0.53185	1	0.5811	1	0.6801	1
1Q GAIN MUTATION ANALYSIS	30 (44%)	38	0.25241	1	0.67978	1	0.18671	1	1	1	1	1	0.91326	1	0.36738	1	0.59819	1	0.44939	1
2P GAIN MUTATION ANALYSIS	9 (13%)	59	0.65592	1	0.10321	1	0.22043	1	1	1	0.75025	1	0.47274	1	1	1	NA	NA	0.81458	1
2Q GAIN MUTATION ANALYSIS	4 (6%)	64	0	0	0.16262	1	0.26983	1	1	1	1	1	0.47903	1	0.5736	1	NA	NA	NA	NA
3P GAIN MUTATION ANALYSIS	11 (16%)	57	0.87336	1	0.89424	1	0.72572	1	0.27966	1	1	1	0.13352	1	1	1	NA	NA	0.21832	1
3Q GAIN MUTATION ANALYSIS	40 (59%)	28	0.63322	1	0.99977	1	0.79219	1	0.42449	1	0.2385	1	0.0041453	1	0.3677	1	0.62462	1	0.16438	1
4P GAIN MUTATION ANALYSIS	3 (4%)	65	NA	NA	0.15796	1	NA	NA	0.33333	1	NA	NA	1	1	0.50507	1	NA	NA	NA	NA
5P GAIN MUTATION ANALYSIS	20 (29%)	48	0.50818	1	0.85062	1	0.38165	1	1	1	1	1	0.14194	1	1	1	0.47126	1	0.557	1
5Q GAIN MUTATION ANALYSIS	6 (9%)	62	0.19018	1	0.68326	1	1	1	0.65701	1	1	1	1	1	0.59549	1	NA	NA	0.75883	1
6P GAIN MUTATION ANALYSIS	14 (21%)	54	0.97499	1	0.14443	1	1	1	0.51564	1	0.69418	1	0.40675	1	1	1	0.70045	1	0.013915	1
6Q GAIN MUTATION ANALYSIS	6 (9%)	62	0.99704	1	0.45438	1	1	1	0.65406	1	0.19099	1	1	1	1	1	NA	NA	0.075746	1
7P GAIN MUTATION ANALYSIS	6 (9%)	62	0.74587	1	0.59538	1	0.32922	1	1	1	1	1	0.6302	1	0.59549	1	NA	NA	0.3191	1
7Q GAIN MUTATION ANALYSIS	8 (12%)	60	0.59976	1	0.35657	1	1	1	1	1	0.75025	1	0.6746	1	0.05015	1	NA	NA	0.42905	1
8P GAIN MUTATION ANALYSIS	12 (18%)	56	0.67632	1	0.2758	1	1	1	0.73527	1	1	1	0.74986	1	0.70095	1	0.91302	1	0.96713	1
8Q GAIN MUTATION ANALYSIS	17 (25%)	51	0.98728	1	0.43664	1	1	1	1	1	1	1	1	1	1	1	0.91302	1	0.99163	1
9P GAIN MUTATION ANALYSIS	8 (12%)	60	0.52098	1	0.6147	1	0.43025	1	1	1	1	1	1	1	1	1	NA	NA	0.81458	1
9Q GAIN MUTATION ANALYSIS	9 (13%)	59	0.53927	1	0.64746	1	0.48038	1	1	1	1	1	1	1	0.67297	1	NA	NA	0.81458	1
10P GAIN MUTATION ANALYSIS	5 (7%)	63	0.51761	1	0.44624	1	0.15532	1	0.3226	1	1	1	1	1	0.57526	1	NA	NA	0.30201	1
11P GAIN MUTATION ANALYSIS	3 (4%)	65	NA	NA	0.069054	1	NA	NA	1	1	NA	NA	0.38431	1	1	1	NA	NA	NA	NA
12P GAIN MUTATION ANALYSIS	10 (15%)	58	0.78237	1	0.10947	1	0.29239	1	1	1	0.49988	1	1	1	0.41829	1	0.36526	1	0.52978	1
12Q GAIN MUTATION ANALYSIS	10 (15%)	58	0.94628	1	0.16213	1	0.72572	1	1	1	0.80599	1	0.52241	1	0.41829	1	NA	NA	0.52978	1
13Q GAIN MUTATION ANALYSIS	3 (4%)	65	0	0	0.91025	1	1	1	1	1	0.33872	1	0.38431	1	1	1	NA	NA	NA	NA
14Q GAIN MUTATION ANALYSIS	8 (12%)	60	0.59497	1	0.76332	1	0.68368	1	0.67712	1	1	1	0.6746	1	1	1	NA	NA	0.96053	1
15Q GAIN MUTATION ANALYSIS	8 (12%)	60	0.12438	1	0.67805	1	0.015747	1	1	1	1	1	0.6746	1	0.66458	1	NA	NA	0.17755	1
16P GAIN MUTATION ANALYSIS	7 (10%)	61	0.6287	1	0.66673	1	0.041818	1	0.67712	1	0.75025	1	1	1	1	1	NA	NA	0.45823	1
16Q GAIN MUTATION ANALYSIS	6 (9%)	62	0.58633	1	0.54468	1	0.015747	1	1	1	1	1	0.6302	1	1	1	NA	NA	0.68367	1
17P GAIN MUTATION ANALYSIS	4 (6%)	64	0.1511	1	0.92058	1	0.11331	1	0.10383	1	1	1	0.47903	1	0.18527	1	NA	NA	0.38885	1
17Q GAIN MUTATION ANALYSIS	6 (9%)	62	0.22148	1	0.49353	1	0.015747	1	0.39114	1	0.71754	1	0.6302	1	0.59549	1	NA	NA	0.49212	1
18P GAIN MUTATION ANALYSIS	6 (9%)	62	0.39917	1	0.05	1	0.16972	1	1	1	1	1	1	1	0.59549	1	NA	NA	0.33935	1
18Q GAIN MUTATION ANALYSIS	4 (6%)	64	0.69819	1	0.19622	1	0.11331	1	0.59528	1	1	1	1	1	0.18527	1	NA	NA	0.96396	1
19P GAIN MUTATION ANALYSIS	12 (18%)	56	0.66381	1	0.084599	1	1	1	0.1915	1	0.82751	1	1	1	0.012279	1	NA	NA	0.57173	1
19Q GAIN MUTATION ANALYSIS	15 (22%)	53	0.005142	1	0.2573	1	1	1	0.3287	1	0.58649	1	0.80084	1	0.00012395	0.0755	0.94403	1	0.23811	1
20P GAIN MUTATION ANALYSIS	19 (28%)	49	0.10674	1	0.80513	1	0.77092	1	0.25312	1	0.88289	1	0.59396	1	0.51243	1	0.21904	1	0.4666	1
20Q GAIN MUTATION ANALYSIS	23 (34%)	45	0.40447	1	0.50219	1	0.16263	1	0.58359	1	0.89868	1	0.53931	1	0.5288	1	0.16988	1	0.66889	1
21Q GAIN MUTATION ANALYSIS	9 (13%)	59	0.039274	1	0.093657	1	0.68368	1	0.67712	1	1	1	0.68883	1	0.37738	1	NA	NA	0.33935	1
22Q GAIN MUTATION ANALYSIS	9 (13%)	59	0.37996	1	0.065827	1	0.43025	1	0.42343	1	1	1	1	1	1	1	NA	NA	0.45823	1
XQ GAIN MUTATION ANALYSIS	8 (12%)	60	0.90184	1	0.8354	1	0.24527	1	0.70787	1	1	1	1	1	0.66458	1	NA	NA	0.29148	1
1P LOSS MUTATION ANALYSIS	3 (4%)	65	NA	NA	0.62361	1	NA	NA	1	1	NA	NA	1	1	0.10532	1	NA	NA	NA	NA
1Q LOSS MUTATION ANALYSIS	3 (4%)	65	0.18188	1	0.48874	1	0.54536	1	0.2556	1	1	1	1	1	0.0072631	1	NA	NA	0.47992	1
2P LOSS MUTATION ANALYSIS	3 (4%)	65	0.39997	1	0.51718	1	1	1	0.54469	1	0.58752	1	1	1	0.50507	1	NA	NA	0.00025059	0.151
2Q LOSS MUTATION ANALYSIS	7 (10%)	61	0.97567	1	0.66422	1	0.68368	1	0.67712	1	1	1	0.66599	1	0.14748	1	NA	NA	0.43473	1
3P LOSS MUTATION ANALYSIS	18 (26%)	50	0.37127	1	0.20233	1	0.54452	1	0.033718	1	0.87161	1	0.1931	1	0.03997	1	0.6275	1	0.30142	1
4P LOSS MUTATION ANALYSIS	29 (43%)	39	0.45293	1	0.10242	1	1	1	0.42695	1	0.63926	1	0.013868	1	0.24131	1	0.72222	1	0.47793	1
4Q LOSS MUTATION ANALYSIS	14 (21%)	54	0.022903	1	0.22365	1	0.34262	1	0.10298	1	0.84367	1	0.48906	1	0.1437	1	0.9612	1	0.17071	1
5P LOSS MUTATION ANALYSIS	4 (6%)	64	0.00085644	0.515	0.43067	1	0.28947	1	0.10383	1	1	1	1	1	0.18527	1	NA	NA	0.15903	1
5Q LOSS MUTATION ANALYSIS	16 (24%)	52	0.011725	1	0.074643	1	0.22605	1	0.54507	1	0.85117	1	0.29385	1	0.72551	1	0.65691	1	0.77709	1
6P LOSS MUTATION ANALYSIS	7 (10%)	61	0.88284	1	0.062349	1	1	1	0.089219	1	1	1	1	1	0.33016	1	0.1677	1	0.4239	1
6Q LOSS MUTATION ANALYSIS	13 (19%)	55	0.26099	1	0.03308	1	1	1	0.51303	1	0.46542	1	0.46873	1	0.27492	1	0.042853	1	0.5949	1
7P LOSS MUTATION ANALYSIS	6 (9%)	62	0.44637	1	0.80056	1	1	1	0.39114	1	0.51417	1	1	1	0.014102	1	0.97633	1	0.35979	1
7Q LOSS MUTATION ANALYSIS	10 (15%)	58	5.7355e-06	0.0035	0.18167	1	0.43025	1	0.10417	1	0.077463	1	1	1	0.0035743	1	0.93512	1	0.056892	1
8P LOSS MUTATION ANALYSIS	20 (29%)	48	0.15281	1	0.6476	1	0.55734	1	0.77069	1	0.87616	1	0.05962	1	0.74285	1	0.22259	1	0.82256	1
8Q LOSS MUTATION ANALYSIS	5 (7%)	63	0.88964	1	0.1417	1	0.6025	1	0.29173	1	0.3767	1	1	1	0.27188	1	NA	NA	0.00025059	0.151
9P LOSS MUTATION ANALYSIS	11 (16%)	57	0.014857	1	0.46076	1	1	1	1	1	0.62624	1	0.53322	1	0.68434	1	0.58629	1	0.46135	1
9Q LOSS MUTATION ANALYSIS	7 (10%)	61	0.29168	1	0.32305	1	1	1	1	1	0.53055	1	0.2235	1	0.62702	1	NA	NA	0.9556	1
10P LOSS MUTATION ANALYSIS	14 (21%)	54	0.0093354	1	0.13155	1	0.73711	1	0.08482	1	0.27746	1	0.79515	1	0.03097	1	0.81323	1	0.070284	1
10Q LOSS MUTATION ANALYSIS	16 (24%)	52	0.013604	1	0.20736	1	0.75709	1	0.025331	1	0.29005	1	1	1	0.29091	1	0.5623	1	0.042427	1
11P LOSS MUTATION ANALYSIS	22 (32%)	46	0.64498	1	0.99562	1	0.58018	1	0.7824	1	0.47662	1	0.036986	1	0.52261	1	0.45137	1	0.24479	1
11Q LOSS MUTATION ANALYSIS	26 (38%)	42	0.80986	1	0.08202	1	0.41848	1	0.59468	1	1	1	0.57156	1	1	1	0.24713	1	0.49063	1
12P LOSS MUTATION ANALYSIS	11 (16%)	57	0.31193	1	0.10346	1	0.47238	1	0.4736	1	0.61791	1	1	1	0.43729	1	0.84515	1	0.62507	1
13Q LOSS MUTATION ANALYSIS	20 (29%)	48	0.26937	1	0.92493	1	0.78164	1	0.15059	1	0.52109	1	0.14194	1	1	1	0.49773	1	0.36596	1
14Q LOSS MUTATION ANALYSIS	4 (6%)	64	0	0	0.56579	1	0.6025	1	1	1	1	1	1	1	0.5736	1	NA	NA	0.00025059	0.151
15Q LOSS MUTATION ANALYSIS	6 (9%)	62	0.79174	1	0.77257	1	1	1	0.65406	1	0.71754	1	1	1	1	1	NA	NA	0.8838	1
16P LOSS MUTATION ANALYSIS	6 (9%)	62	0.91046	1	0.25362	1	0.15532	1	0.15968	1	0.28418	1	0.10303	1	0.33256	1	NA	NA	0.00024684	0.15
16Q LOSS MUTATION ANALYSIS	9 (13%)	59	0.67317	1	0.12245	1	0.24527	1	0.043853	1	0.77403	1	0.0049086	1	0.18661	1	NA	NA	0.0002349	0.143
17P LOSS MUTATION ANALYSIS	17 (25%)	51	0.15684	1	0.17646	1	0.75709	1	1	1	0.13048	1	0.26461	1	0.7372	1	0.57783	1	0.5564	1
17Q LOSS MUTATION ANALYSIS	5 (7%)	63	0.3566	1	0.086474	1	1	1	0.59528	1	0.3767	1	1	1	0.27188	1	NA	NA	0.3949	1
18P LOSS MUTATION ANALYSIS	10 (15%)	58	0.27873	1	0.076588	1	0.14741	1	0.70521	1	1	1	0.707	1	0.02535	1	0.03326	1	0.75829	1
18Q LOSS MUTATION ANALYSIS	16 (24%)	52	0.81494	1	0.32402	1	0.22605	1	0.069209	1	0.30823	1	0.19696	1	0.29091	1	0.36468	1	0.23654	1
19P LOSS MUTATION ANALYSIS	8 (12%)	60	0.55906	1	0.29937	1	1	1	0.15968	1	0.70482	1	0.6746	1	0.34664	1	NA	NA	0.00024684	0.15
19Q LOSS MUTATION ANALYSIS	5 (7%)	63	0.29289	1	0.87327	1	1	1	0.29173	1	1	1	1	1	1	1	NA	NA	0.00024684	0.15
20P LOSS MUTATION ANALYSIS	7 (10%)	61	0.80716	1	0.66393	1	0.65514	1	1	1	1	1	0.35584	1	0.33016	1	0.141	1	0.33935	1
20Q LOSS MUTATION ANALYSIS	3 (4%)	65	NA	NA	0.16012	1	NA	NA	1	1	NA	NA	1	1	1	1	NA	NA	NA	NA
21Q LOSS MUTATION ANALYSIS	10 (15%)	58	0.25746	1	0.21407	1	0.72572	1	1	1	0.80599	1	0.52241	1	1	1	NA	NA	0.64971	1
22Q LOSS MUTATION ANALYSIS	9 (13%)	59	0.46084	1	0.22464	1	0.70403	1	0.70787	1	0.42467	1	0.30191	1	0.37738	1	NA	NA	0.51349	1
XQ LOSS MUTATION ANALYSIS	15 (22%)	53	0.00012277	0.0749	0.66486	1	0.52079	1	0.51303	1	0.6527	1	0.80084	1	0.064876	1	0.14515	1	0.3415	1