Clinical Features	Time to Death		AGE		PRIMARY.SITE.OF.DISEASE		KARNOFSKY.PERFORMANCE.SCORE		RADIATIONS.RADIATION.REGIMENINDICATION		COMPLETENESS.OF.RESECTION	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
AMP PEAK  1(1P34.3) MUTATION ANALYSIS	280 (50%)	282	0.030497	1	0.0090495	1	1	1	0.98496	1	0.123	1	0.47798	1
AMP PEAK  2(1Q21.3) MUTATION ANALYSIS	353 (63%)	209	0.28884	1	3.7414e-06	0.00155	0.12802	1	0.40756	1	1	1	0.34918	1
AMP PEAK  3(1Q42.2) MUTATION ANALYSIS	306 (54%)	256	0.27541	1	0.00059142	0.241	0.25227	1	0.7365	1	0.59403	1	0.87473	1
AMP PEAK  4(2P23.2) MUTATION ANALYSIS	235 (42%)	327	0.93492	1	0.082218	1	0.7623	1	0.98836	1	1	1	0.66377	1
AMP PEAK  5(2Q31.2) MUTATION ANALYSIS	248 (44%)	314	0.19695	1	0.01423	1	0.75624	1	0.69254	1	0.085349	1	0.87321	1
AMP PEAK  6(3Q26.2) MUTATION ANALYSIS	466 (83%)	96	0.95034	1	0.0007876	0.32	0.52714	1	0.001308	0.53	1	1	0.77812	1
AMP PEAK  7(4P16.3) MUTATION ANALYSIS	155 (28%)	407	0.37232	1	0.66985	1	0.72265	1	0.07285	1	1	1	0.5291	1
AMP PEAK  8(4Q13.3) MUTATION ANALYSIS	106 (19%)	456	0.23464	1	0.20412	1	0.5711	1	0.41975	1	1	1	0.41057	1
AMP PEAK  9(5P15.33) MUTATION ANALYSIS	296 (53%)	266	0.079126	1	0.0025494	1	0.75078	1	0.79795	1	0.60533	1	0.04695	1
AMP PEAK 10(6P22.3) MUTATION ANALYSIS	285 (51%)	277	0.1474	1	0.0050848	1	1	1	0.5448	1	0.61904	1	0.51435	1
AMP PEAK 11(7Q36.3) MUTATION ANALYSIS	300 (53%)	262	0.2525	1	0.84144	1	1	1	0.10005	1	0.60067	1	0.16132	1
AMP PEAK 12(8P11.21) MUTATION ANALYSIS	202 (36%)	360	0.28126	1	0.00050357	0.206	0.12077	1	0.66216	1	0.29435	1	0.16132	1
AMP PEAK 13(8Q24.21) MUTATION ANALYSIS	441 (78%)	121	0.57314	1	0.0972	1	1	1	0.62757	1	0.51753	1	0.39141	1
AMP PEAK 14(10P15.3) MUTATION ANALYSIS	239 (43%)	323	0.11108	1	0.00040333	0.165	0.15397	1	0.92261	1	0.57763	1	0.75957	1
AMP PEAK 15(10Q22.3) MUTATION ANALYSIS	174 (31%)	388	0.54465	1	0.21572	1	0.093412	1	0.98882	1	1	1	0.4147	1
AMP PEAK 16(11Q14.1) MUTATION ANALYSIS	248 (44%)	314	0.28705	1	0.32558	1	0.25584	1	0.47437	1	1	1	1	1
AMP PEAK 17(12P13.33) MUTATION ANALYSIS	315 (56%)	247	0.75318	1	3.9651e-07	0.000165	0.75581	1	0.73474	1	1	1	0.3389	1
AMP PEAK 18(12P12.1) MUTATION ANALYSIS	300 (53%)	262	0.10091	1	1.0794e-08	4.52e-06	0.25099	1	0.33477	1	0.60067	1	1	1
AMP PEAK 19(12Q15) MUTATION ANALYSIS	209 (37%)	353	0.1079	1	1.8198e-07	7.59e-05	0.017596	1	0.26664	1	1	1	0.65908	1
AMP PEAK 20(14Q11.2) MUTATION ANALYSIS	142 (25%)	420	0.81772	1	0.063266	1	0.12396	1	0.37817	1	1	1	0.81205	1
AMP PEAK 21(14Q32.33) MUTATION ANALYSIS	150 (27%)	412	0.28359	1	0.01683	1	0.71137	1	0.11321	1	0.1752	1	1	1
AMP PEAK 22(15Q26.3) MUTATION ANALYSIS	154 (27%)	408	0.056579	1	0.29051	1	0.72816	1	0.41962	1	0.56548	1	1	1
AMP PEAK 23(17Q25.3) MUTATION ANALYSIS	204 (36%)	358	0.040203	1	0.7698	1	1	1	0.68542	1	1	1	0.090115	1
AMP PEAK 24(18Q11.2) MUTATION ANALYSIS	136 (24%)	426	0.95586	1	0.042736	1	0.11384	1	0.17994	1	0.56521	1	0.83728	1
AMP PEAK 25(19P13.12) MUTATION ANALYSIS	304 (54%)	258	0.18071	1	0.068415	1	0.46097	1	0.59701	1	0.5962	1	0.41263	1
AMP PEAK 26(19Q12) MUTATION ANALYSIS	310 (55%)	252	0.66538	1	1.0752e-05	0.00443	0.16224	1	0.51038	1	1	1	1	1
AMP PEAK 27(19Q13.2) MUTATION ANALYSIS	235 (42%)	327	0.016873	1	3.095e-06	0.00128	0.14987	1	0.98882	1	0.57434	1	0.21148	1
AMP PEAK 28(20P13) MUTATION ANALYSIS	309 (55%)	253	0.3106	1	0.0019321	0.781	0.75425	1	0.10999	1	1	1	0.38091	1
AMP PEAK 29(20Q11.21) MUTATION ANALYSIS	328 (58%)	234	0.096932	1	6.6569e-08	2.78e-05	1	1	0.26442	1	1	1	0.58382	1
AMP PEAK 30(20Q13.33) MUTATION ANALYSIS	389 (69%)	173	0.32746	1	9.7877e-06	0.00404	1	1	0.75229	1	1	1	0.080164	1
AMP PEAK 31(22Q12.2) MUTATION ANALYSIS	88 (16%)	474	0.50636	1	0.023446	1	1	1	0.41922	1	1	1	1	1
AMP PEAK 32(XP11.23) MUTATION ANALYSIS	163 (29%)	399	0.17355	1	0.021456	1	0.078111	1	0.27522	1	0.56018	1	0.19172	1
AMP PEAK 33(XQ28) MUTATION ANALYSIS	221 (39%)	341	0.33737	1	0.95579	1	0.77011	1	0.65424	1	0.060308	1	0.87098	1
DEL PEAK  1(1P36.11) MUTATION ANALYSIS	261 (46%)	301	0.20531	1	0.19436	1	0.75078	1	0.42681	1	1	1	0.87098	1
DEL PEAK  2(1Q32.3) MUTATION ANALYSIS	92 (16%)	470	0.88636	1	0.51212	1	1	1	0.287	1	0.41571	1	NA	NA
DEL PEAK  3(2P25.3) MUTATION ANALYSIS	118 (21%)	444	0.82672	1	0.45155	1	0.61547	1	0.87498	1	0.5076	1	0.02157	1
DEL PEAK  4(2Q22.1) MUTATION ANALYSIS	131 (23%)	431	0.30207	1	0.37828	1	0.65632	1	0.59544	1	1	1	0.46748	1
DEL PEAK  5(2Q37.3) MUTATION ANALYSIS	171 (30%)	391	0.46709	1	0.099148	1	0.35905	1	0.43156	1	0.22096	1	0.25325	1
DEL PEAK  6(3P26.2) MUTATION ANALYSIS	207 (37%)	355	0.77056	1	0.0023283	0.938	0.12641	1	0.24583	1	0.049511	1	0.28678	1
DEL PEAK  7(4Q22.1) MUTATION ANALYSIS	379 (67%)	183	0.58108	1	0.93799	1	1	1	0.92539	1	1	1	0.36255	1
DEL PEAK  8(4Q34.3) MUTATION ANALYSIS	407 (72%)	155	0.88678	1	0.3532	1	0.72816	1	0.1711	1	0.5648	1	0.3861	1
DEL PEAK  9(5Q11.2) MUTATION ANALYSIS	335 (60%)	227	0.66218	1	0.64139	1	0.76732	1	0.32514	1	0.56843	1	0.20907	1
DEL PEAK 10(5Q13.2) MUTATION ANALYSIS	400 (71%)	162	0.20552	1	0.93361	1	0.74681	1	0.21637	1	0.20091	1	0.23844	1
DEL PEAK 11(6Q27) MUTATION ANALYSIS	375 (67%)	187	0.301	1	0.00066958	0.273	1	1	0.50848	1	1	1	0.87227	1
DEL PEAK 12(7P22.1) MUTATION ANALYSIS	244 (43%)	318	0.063457	1	0.027393	1	0.75759	1	0.49672	1	1	1	0.13298	1
DEL PEAK 13(8P23.3) MUTATION ANALYSIS	377 (67%)	185	0.27339	1	0.059749	1	1	1	0.95041	1	1	1	0.85858	1
DEL PEAK 14(8P21.2) MUTATION ANALYSIS	392 (70%)	170	0.59358	1	0.066692	1	1	1	0.64693	1	1	1	0.65767	1
DEL PEAK 15(9P24.3) MUTATION ANALYSIS	253 (45%)	309	0.8597	1	0.023788	1	0.44966	1	0.92791	1	0.59087	1	0.58407	1
DEL PEAK 16(9Q34.13) MUTATION ANALYSIS	336 (60%)	226	0.6643	1	0.042059	1	0.76732	1	0.62301	1	0.27745	1	0.18043	1
DEL PEAK 17(10P15.3) MUTATION ANALYSIS	118 (21%)	444	0.2931	1	0.83872	1	0.60833	1	0.72035	1	0.5076	1	1	1
DEL PEAK 18(10Q23.31) MUTATION ANALYSIS	219 (39%)	343	0.25762	1	0.99461	1	1	1	0.39299	1	0.56349	1	0.60145	1
DEL PEAK 19(10Q26.3) MUTATION ANALYSIS	189 (34%)	373	0.058738	1	0.81743	1	0.79979	1	0.77021	1	1	1	1	1
DEL PEAK 20(11P15.5) MUTATION ANALYSIS	332 (59%)	230	0.052306	1	0.55038	1	0.026685	1	0.26732	1	1	1	0.66377	1
DEL PEAK 21(11Q25) MUTATION ANALYSIS	193 (34%)	369	0.60453	1	0.077054	1	0.22459	1	0.6305	1	0.27242	1	0.25325	1
DEL PEAK 22(12Q24.33) MUTATION ANALYSIS	211 (38%)	351	0.75652	1	0.10598	1	0.12963	1	0.65197	1	0.29529	1	0.079332	1
DEL PEAK 23(13Q14.2) MUTATION ANALYSIS	349 (62%)	213	0.057155	1	0.54946	1	0.77706	1	0.59232	1	0.56044	1	0.27186	1
DEL PEAK 24(14Q23.3) MUTATION ANALYSIS	295 (52%)	267	0.4077	1	0.6038	1	0.47495	1	0.012285	1	0.1066	1	0.47798	1
DEL PEAK 25(15Q15.1) MUTATION ANALYSIS	353 (63%)	209	0.71417	1	0.0053407	1	0.41147	1	0.25272	1	0.29799	1	0.87017	1
DEL PEAK 26(16P13.3) MUTATION ANALYSIS	299 (53%)	263	0.83855	1	0.86681	1	0.751	1	0.57764	1	0.60182	1	0.75948	1
DEL PEAK 27(16Q22.1) MUTATION ANALYSIS	447 (80%)	115	0.56021	1	0.0043833	1	0.19319	1	0.27537	1	1	1	0.32876	1
DEL PEAK 28(16Q23.1) MUTATION ANALYSIS	437 (78%)	125	0.13481	1	8.1188e-05	0.0334	0.63633	1	0.077815	1	1	1	0.19471	1
DEL PEAK 29(17P12) MUTATION ANALYSIS	475 (85%)	87	0.7157	1	0.98953	1	0.49311	1	0.73023	1	1	1	0.47013	1
DEL PEAK 30(17Q11.2) MUTATION ANALYSIS	460 (82%)	102	0.65041	1	0.032309	1	0.066632	1	0.68639	1	1	1	0.87321	1
DEL PEAK 31(18Q23) MUTATION ANALYSIS	368 (65%)	194	0.75374	1	0.46376	1	0.22459	1	0.54379	1	1	1	1	1
DEL PEAK 32(19P13.3) MUTATION ANALYSIS	495 (88%)	67	0.29096	1	0.016801	1	1	1	0.008327	1	1	1	0.42274	1
DEL PEAK 33(19Q13.33) MUTATION ANALYSIS	291 (52%)	271	0.57186	1	0.34309	1	1	1	0.31129	1	0.24961	1	0.35449	1
DEL PEAK 34(19Q13.43) MUTATION ANALYSIS	276 (49%)	286	0.367	1	0.029971	1	1	1	0.28294	1	1	1	0.3389	1
DEL PEAK 35(21Q22.3) MUTATION ANALYSIS	217 (39%)	345	0.49527	1	0.34098	1	0.77386	1	0.66531	1	1	1	0.66377	1
DEL PEAK 36(22Q13.32) MUTATION ANALYSIS	487 (87%)	75	0.887	1	0.909	1	0.44336	1	0.75231	1	1	1	0.6748	1
DEL PEAK 37(XP21.1) MUTATION ANALYSIS	360 (64%)	202	0.91253	1	0.38372	1	1	1	0.98653	1	0.55641	1	0.75948	1