Unique Name	Descriptor	Wide Peak Limits	Peak Limits	Region Limits	q values	Residual q values after removing segments shared with higher peaks	Broad or Focal	Amplitude Threshold	TCGA-BL-A0C8-01A-11D-A10R-02	TCGA-BL-A13I-01A-11D-A13U-02	TCGA-BL-A13J-01A-11D-A10R-02	TCGA-BL-A3JM-01A-12D-A21C-26	TCGA-BT-A0S7-01A-11D-A10R-02	TCGA-BT-A0YX-01A-11D-A10R-02	TCGA-BT-A20N-01A-11D-A14U-02	TCGA-BT-A20O-01A-21D-A14U-02	TCGA-BT-A20P-01A-11D-A14U-02	TCGA-BT-A20Q-01A-11D-A14U-02	TCGA-BT-A20R-01A-12D-A16N-02	TCGA-BT-A20T-01A-11D-A14U-02	TCGA-BT-A20U-01A-11D-A14U-02	TCGA-BT-A20W-01A-21D-A14U-02	TCGA-BT-A20X-01A-11D-A16N-02	TCGA-BT-A2LA-01A-11D-A18D-02	TCGA-BT-A2LB-01A-11D-A18D-02	TCGA-BT-A2LD-01A-12D-A210-26	TCGA-BT-A3PH-01A-11D-A221-26	TCGA-BT-A3PJ-01A-21D-A221-26	TCGA-BT-A3PK-01A-21D-A221-26	TCGA-C4-A0F0-01A-12D-A10R-02	TCGA-C4-A0F6-01A-11D-A10R-02	TCGA-CF-A1HR-01A-11D-A13U-02	TCGA-CF-A1HS-01A-11D-A13U-02	TCGA-CF-A27C-01A-11D-A16N-02	TCGA-CF-A3MF-01A-12D-A21C-26	TCGA-CF-A3MG-01A-11D-A210-26	TCGA-CF-A3MH-01A-11D-A210-26	TCGA-CF-A3MI-01A-11D-A210-26	TCGA-CU-A0YN-01A-21D-A10R-02	TCGA-CU-A0YO-01A-11D-A10R-02	TCGA-CU-A0YR-01A-12D-A10R-02	TCGA-CU-A3KJ-01A-11D-A21C-26	TCGA-CU-A3QU-01A-11D-A233-26	TCGA-CU-A3YL-01A-11D-A233-26	TCGA-DK-A1A3-01A-11D-A13U-02	TCGA-DK-A1A5-01A-11D-A13U-02	TCGA-DK-A1A6-01A-11D-A13U-02	TCGA-DK-A1A7-01A-11D-A13U-02	TCGA-DK-A1AA-01A-11D-A13U-02	TCGA-DK-A1AB-01A-11D-A13U-02	TCGA-DK-A1AC-01A-11D-A13U-02	TCGA-DK-A1AD-01A-11D-A13U-02	TCGA-DK-A1AE-01A-11D-A13U-02	TCGA-DK-A1AG-01A-11D-A13U-02	TCGA-DK-A2HX-01A-12D-A18D-02	TCGA-DK-A2I1-01A-11D-A17R-02	TCGA-DK-A2I2-01A-11D-A17R-02	TCGA-DK-A2I6-01A-12D-A18D-02	TCGA-DK-A3IK-01A-32D-A21C-26	TCGA-DK-A3IL-01A-11D-A210-26	TCGA-DK-A3IN-01A-11D-A210-26	TCGA-DK-A3IQ-01A-31D-A210-26	TCGA-DK-A3IT-01A-31D-A210-26	TCGA-DK-A3IU-01A-11D-A210-26	TCGA-DK-A3IV-01A-22D-A21C-26	TCGA-DK-A3WX-01A-22D-A233-26	TCGA-DK-A3WY-01A-11D-A233-26	TCGA-DK-A3X1-01A-12D-A233-26	TCGA-DK-A3X2-01A-11D-A233-26	TCGA-E5-A2PC-01A-11D-A204-02	TCGA-E7-A3X6-01A-12D-A233-26	TCGA-E7-A3Y1-01A-11D-A233-26	TCGA-FD-A3B3-01A-12D-A204-02	TCGA-FD-A3B4-01A-12D-A204-02	TCGA-FD-A3B5-01A-11D-A210-26	TCGA-FD-A3B6-01A-21D-A210-26	TCGA-FD-A3B7-01A-31D-A210-26	TCGA-FD-A3B8-01A-31D-A210-26	TCGA-FD-A3N5-01A-11D-A21C-26	TCGA-FD-A3N6-01A-11D-A21C-26	TCGA-FD-A3NA-01A-11D-A21C-26	TCGA-FD-A3SJ-01A-12D-A233-26	TCGA-FD-A3SL-01A-21D-A233-26	TCGA-FD-A3SM-01A-11D-A233-26	TCGA-FD-A3SN-01A-12D-A233-26	TCGA-FD-A3SO-01A-11D-A233-26	TCGA-FD-A3SP-01A-31D-A233-26	TCGA-FD-A3SQ-01A-21D-A233-26	TCGA-FD-A3SR-01A-11D-A233-26	TCGA-FD-A3SS-01A-12D-A233-26	TCGA-FT-A3EE-01A-11D-A204-02	TCGA-G2-A2EC-01A-11D-A17R-02	TCGA-G2-A2EF-01A-12D-A18D-02	TCGA-G2-A2EJ-01A-11D-A17R-02	TCGA-G2-A2EK-01A-22D-A18D-02	TCGA-G2-A2EL-01A-12D-A18D-02	TCGA-G2-A2ES-01A-11D-A17R-02	TCGA-G2-A3IB-01A-11D-A210-26	TCGA-G2-A3IE-01A-11D-A210-26	TCGA-G2-A3VY-01A-11D-A233-26	TCGA-GC-A3BM-01A-11D-A23Q-26	TCGA-GC-A3I6-01A-11D-A210-26	TCGA-GC-A3OO-01A-11D-A233-26	TCGA-GC-A3RD-01A-12D-A233-26	TCGA-GC-A3WC-01A-31D-A233-26	TCGA-GD-A2C5-01A-12D-A17R-02	TCGA-GD-A3OP-01A-21D-A221-26	TCGA-GD-A3OQ-01A-32D-A221-26	TCGA-GD-A3OS-01A-12D-A221-26	TCGA-GV-A3JV-01A-11D-A221-26	TCGA-GV-A3JW-01A-11D-A210-26	TCGA-GV-A3JX-01A-11D-A210-26	TCGA-GV-A3JZ-01A-11D-A21C-26	TCGA-GV-A3QF-01A-31D-A233-26	TCGA-GV-A3QG-01A-11D-A221-26	TCGA-GV-A3QH-01A-11D-A221-26	TCGA-H4-A2HQ-01A-11D-A17R-02	TCGA-HQ-A2OE-01A-11D-A204-02	TCGA-K4-A3WS-01A-11D-A23Q-26	TCGA-K4-A3WV-01A-11D-A23Q-26	
Amplification Peak  1	1p34.2  	chr1:39396332-40714877(probes 256:281)        	chr1:40428006-40433921(probes 277:278)        	chr1:39479427-40890613(probes 257:283)      	0.027548	   0.027548		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	1	0	1	0	2	2	0	0	0	2	0	0	0	0	0	0	0	0	0	1	0	2	0	0	2	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	2	0	2	0	0	1	0	0	0	0	0	0	0	0	1	0	1	
Amplification Peak  2	1q23.3  	chr1:160624317-161190721(probes 1043:1068)  	chr1:160887451-161070225(probes 1050:1057)  	chr1:158067621-174178027(probes 982:1260) 	7.5348e-09	 7.5348e-09		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	2	0	2	1	0	0	2	0	0	0	1	1	0	0	0	1	1	1	2	2	1	0	0	0	1	0	0	0	0	1	0	0	2	2	0	0	1	1	0	2	0	0	2	2	0	0	0	0	1	2	2	2	0	0	1	2	0	0	0	2	1	1	1	1	0	1	0	0	1	0	0	0	0	2	0	1	0	1	0	0	2	0	1	0	2	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	1	1	1	1	2	2	1	0	2	1	2	0	
Amplification Peak  3	3p25.2  	chr3:11913848-12576749(probes 3406:3423)      	chr3:12037673-12181459(probes 3411:3412)      	chr3:8461505-17711296(probes 3359:3485)      	8.5225e-07	 8.5225e-07		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	2	0	1	0	0	0	2	0	0	0	0	0	0	2	0	1	1	1	2	0	0	0	0	1	0	0	2	1	0	1	0	0	2	0	0	1	1	1	2	2	0	0	2	2	0	0	1	0	0	2	0	0	2	0	0	0	0	0	0	1	2	0	0	0	0	0	1	1	0	0	0	0	0	2	2	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	2	1	0	0	1	0	0	0	0	0	1	2	2	0	1	1	1	0	0	1	0	1	
Amplification Peak  4	4q13.3  	chr4:68533744-78216278(probes 5306:5448)      	chr4:73630009-73651302(probes 5389:5390)      	chr4:73630009-73735315(probes 5389:5393)    	0.18938	    0.18938		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	2	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	1	2	0	0	0	0	2	0	0	0	0	0	0	0	0	1	
Amplification Peak  5	6p22.3  	chr6:17727193-23861197(probes 7901:7942)      	chr6:18898879-23785506(probes 7931:7941)      	chr6:11820586-24863098(probes 7766:7969)    	9.013e-06	  0.0077752		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	2	0	0	0	0	2	0	0	0	0	0	1	0	0	0	1	0	0	1	2	1	0	0	2	2	0	0	0	0	2	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	1	0	1	0	2	0	0	0	0	0	0	2	0	1	0	1	0	1	0	0	0	0	1	0	0	0	0	1	0	2	0	2	
Amplification Peak  6	6p22.3  	chr6:19262639-24823672(probes 7941:7966)      	chr6:19329930-23861198(probes 7942:7943)      	chr6:11820586-24863098(probes 7766:7969)    	0.00015209	  0.0036879		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	2	1	0	0	2	0	0	0	0	0	0	2	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	2	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	2	0	1	0	1	0	1	0	0	0	0	1	0	2	0	0	2	0	0	0	2	
Amplification Peak  7	7p11.2  	chr7:54594326-55726666(probes 9422:9447)      	chr7:54801843-55095530(probes 9429:9434)      	chr7:52223250-64075504(probes 9377:9482)    	1.3064e-06	 1.3064e-06		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	1	0	1	0	1	0	2	0	0	0	0	0	0	1	0	1	1	1	0	2	0	0	1	0	1	0	0	1	0	1	2	1	0	1	0	0	1	2	0	1	0	0	1	0	0	0	1	0	1	1	1	1	1	0	0	1	0	0	0	1	1	0	0	0	0	0	1	2	2	0	2	0	0	1	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	2	0	1	0	1	0	0	1	0	2	0	2	2	0	1	0	0	0	2	
Amplification Peak  8	8p11.23 	chr8:37127703-37944323(probes 10304:10347)    	chr8:37588240-37589461(probes 10335:10336)    	chr8:36028752-39711647(probes 10261:10415)  	0.00036289	 0.00036289		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	2	0	0	0	0	0	2	2	0	0	0	0	2	0	0	0	0	2	0	0	0	0	0	0	0	2	0	0	0	1	1	0	2	0	0	0	1	2	0	2	0	0	0	0	0	1	0	2	2	0	1	0	2	0	2	0	0	0	2	1	2	0	0	0	0	0	0	0	2	
Amplification Peak  9	8q22.3  	chr8:100146645-103355705(probes 11038:11113)	chr8:102013118-102196067(probes 11077:11084)	chr8:97766676-107514570(probes 10995:11171)	1.476e-06	  1.476e-06		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	2	0	1	1	0	0	1	0	0	0	0	0	0	2	1	1	0	2	0	2	0	2	1	0	1	0	0	1	2	0	1	0	2	1	1	0	0	1	2	2	0	0	2	1	2	0	0	0	0	2	2	0	1	0	0	1	0	0	0	2	2	0	0	0	0	0	1	1	0	0	0	2	2	2	0	0	0	0	2	2	0	0	2	0	0	0	2	0	1	0	2	2	0	2	0	2	1	0	1	0	2	2	1	0	2	1	0	1	2	1	1	0	
Amplification Peak 10	10p14   	chr10:4082074-10859662(probes 12435:12486)    	chr10:8070939-8081931(probes 12462:12463)      	chr10:6133931-9837060(probes 12449:12478)    	0.048051	   0.048051		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	1	0	1	0	0	0	2	0	0	2	2	0	0	0	0	0	1	2	0	1	0	0	0	0	1	0	1	1	0	0	0	0	0	2	1	0	1	1	1	0	0	0	2	2	0	0	2	0	0	1	0	1	1	0	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	2	0	2	1	0	0	0	0	1	0	2	0	2	1	0	0	0	0	2	0	0	2	0	0	0	2	0	1	0	0	2	0	1	0	1	2	0	0	0	1	1	0	
Amplification Peak 11	11q13.3 	chr11:70102480-70428787(probes 13926:13945)  	chr11:70219906-70402506(probes 13933:13940)  	chr11:67285060-71281718(probes 13846:13965)	2.8499e-09	 2.8499e-09		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	2	1	0	0	0	0	0	0	0	2	0	0	0	0	1	2	0	0	1	2	1	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	1	1	0	0	0	0	0	2	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	1	0	0	1	0	2	0	1	0	0	2	2	1	0	1	1	0	1	2	0	0	2	
Amplification Peak 12	12q15   	chr12:69121869-70436774(probes 15269:15304)  	chr12:69183509-69479730(probes 15280:15285)  	chr12:68945934-73509949(probes 15264:15332)	4.8476e-06	 4.8476e-06		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	1	0	0	1	2	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	2	0	2	2	0	1	1	0	0	0	0	1	1	2	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	1	0	1	0	2	0	0	0	0	0	0	1	0	0	0	0	0	2	2	0	2	
Amplification Peak 13	16p13.2 	chr16:6480817-13296512(probes 17605:17681)    	chr16:8621585-9287725(probes 17627:17631)      	chr16:7668794-9966764(probes 17614:17637)    	0.056724	    0.18528		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	
Amplification Peak 14	16p12.1 	chr16:23852373-27102172(probes 17734:17772)  	chr16:24657583-24792887(probes 17743:17744)  	chr16:23465398-27102171(probes 17729:17771)	0.0069281	   0.033159		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	2	1	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	0	2	0	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	
Amplification Peak 15	17q11.2 	chr17:20979844-34943690(probes 18337:18507)  	chr17:30963456-31203334(probes 18466:18471)  	chr17:30963456-31286561(probes 18466:18476)	0.16176	    0.19889		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	1	2	1	0	0	0	2	1	1	0	0	0	0	0	0	1	2	0	0	0	0	1	2	0	1	1	0	0	0	0	0	0	0	2	0	0	2	2	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	1	0	0	2	1	0	1	1	1	0	1	
Amplification Peak 16	17q12   	chr17:37807774-38014602(probes 18561:18579)  	chr17:37897401-37900661(probes 18570:18571)  	chr17:37681232-38177005(probes 18552:18582)	0.0003015	 0.00097007		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	2	0	1	2	1	0	0	0	2	1	1	0	0	0	0	0	0	1	0	0	1	0	0	1	0	0	1	1	0	0	0	0	2	0	0	2	0	2	2	1	0	0	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	1	0	2	1	1	0	1	
Amplification Peak 17	19q12   	chr19:30021330-30821093(probes 19814:19845)  	chr19:30479134-30522387(probes 19831:19832)  	chr19:29216916-32990865(probes 19785:19889)	2.9408e-06	 0.00019258		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	1	1	0	0	2	1	0	0	0	0	0	1	0	2	1	2	0	0	0	1	1	0	1	0	1	1	0	0	2	0	0	2	0	1	2	0	1	2	0	1	0	2	0	0	2	0	0	2	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	0	2	1	0	0	0	0	0	2	0	1	0	1	0	0	0	0	0	1	2	0	0	0	1	0	0	0	0	0	1	2	0	2	2	0	1	1	0	1	0	
Amplification Peak 18	19q13.2 	chr19:37953039-41225744(probes 19992:20047)  	chr19:39279384-39348459(probes 20007:20010)  	chr19:38026423-41158370(probes 19993:20045)	0.00025063	   0.041071		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	1	1	0	0	2	1	0	0	2	0	0	1	0	2	1	2	0	0	0	1	1	0	2	0	1	1	0	0	0	0	1	1	0	1	0	2	1	2	0	1	0	2	0	0	2	0	0	2	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	2	0	1	0	2	0	0	0	0	0	0	2	0	0	0	2	0	0	0	0	1	1	1	0	1	1	0	1	1	0	1	0	
Amplification Peak 19	20q11.21	chr20:25328497-30866238(probes 20388:20406)  	chr20:25328498-30329932(probes 20389:20399)  	chr20:25328498-30674492(probes 20389:20402)	0.1314	     0.1314		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	1	0	1	2	1	0	0	0	1	1	1	0	0	0	0	0	0	1	0	0	0	1	2	0	2	0	1	1	0	1	1	0	1	1	0	0	0	1	2	1	0	0	1	1	0	0	1	0	1	1	1	2	1	0	0	1	2	1	0	2	1	0	0	0	0	0	0	1	0	0	0	0	2	1	1	0	0	0	0	1	1	0	1	1	2	1	1	0	0	0	0	2	2	2	1	1	0	1	0	0	2	1	1	1	2	1	0	1	2	2	1	2	
Amplification Peak 20	22q12.1 	chr22:1-27271918(probes 20983:21030)         	chr22:25346602-26296525(probes 21004:21013)  	chr22:25346602-26412431(probes 21004:21016)	0.14087	    0.14087		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	1	0	2	0	0	1	0	0	0	1	0	0	0	1	0	0	1	0	0	1	0	1	0	0	
Deletion Peak  1	2q22.1 	chr2:141719260-142020472(probes 2496:2523)	chr2:141918802-141936476(probes 2511:2512)	chr2:141689625-142154342(probes 2489:2535)	0.00065298	  0.0015751		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	1	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	0	1	1	0	0	0	0	0	0	1	0	0	1	1	0	0	1	1	0	1	0	0	1	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	1	0	0	0	0	2	0	1	0	0	0	0	0	0	1	0	0	0	2	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	
Deletion Peak  2	2q36.3 	chr2:213561821-243199373(probes 3108:3316)	chr2:226228053-226330746(probes 3209:3210)	chr2:209557516-243199373(probes 3066:3316)	8.6613e-06	 1.4589e-05		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	1	0	0	0	1	0	1	1	0	0	0	0	1	1	0	0	1	0	0	0	1	0	0	0	1	0	0	1	1	0	1	0	2	1	0	1	0	0	0	0	1	1	0	0	1	0	0	0	1	1	0	0	1	0	1	0	0	0	1	0	1	0	0	0	1	0	0	0	1	0	0	1	0	0	1	0	0	0	1	1	0	0	1	0	1	1	0	0	0	1	1	0	0	1	1	0	0	0	0	1	1	0	0	0	0	1	0	1	0	1	
Deletion Peak  3	3p12.3 	chr3:41449449-85171246(probes 3647:3961)    	chr3:74851549-75002284(probes 3849:3852)    	chr3:74851549-76158132(probes 3849:3864)    	0.080145	   0.080145		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	1	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	1	0	0	1	0	0	0	0	0	0	0	1	1	1	0	0	1	0	1	0	1	0	0	1	0	0	0	0	0	1	0	0	0	0	1	1	1	0	1	
Deletion Peak  4	4q22.1 	chr4:91510636-92537601(probes 5618:5654)    	chr4:91795806-91872297(probes 5633:5634)    	chr4:91529433-92315174(probes 5619:5647)    	0.0063669	   0.020204		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	1	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	1	0	0	0	1	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	1	1	1	0	0	0	0	1	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	1	0	0	1	0	1	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	1	
Deletion Peak  5	4q34.3 	chr4:155656891-191154276(probes 6172:6341)	chr4:180336313-182164889(probes 6288:6297)	chr4:175886313-183250569(probes 6270:6317)	0.033936	    0.15941		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	1	0	0	0	1	0	0	0	1	0	0	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	1	0	0	1	0	1	1	1	1	0	0	0	1	1	0	0	0	1	1	0	0	0	0	1	1	1	0	1	
Deletion Peak  6	5q12.1 	chr5:45373655-78981219(probes 6712:6952)    	chr5:59114477-59132728(probes 6832:6833)    	chr5:59046403-59470068(probes 6828:6844)    	0.041919	   0.041919		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	1	1	1	0	0	0	1	0	0	0	1	1	0	0	0	1	1	0	1	1	0	0	1	0	1	0	0	1	1	0	0	0	0	0	1	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	1	0	1	1	0	0	1	0	0	1	1	1	1	0	0	0	1	1	0	0	1	0	0	1	1	1	1	0	0	0	1	1	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	1	1	0	1	0	1	1	1	0	1	
Deletion Peak  7	6p25.3 	chr6:1-5266921(probes 7596:7662)                	chr6:1-1875640(probes 7596:7611)                	chr6:1-2054356(probes 7596:7614)                	0.16006	    0.16006		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	0	0	0	0	
Deletion Peak  8	6q21   	chr6:89342867-122609798(probes 8526:8695)  	chr6:108463916-116939576(probes 8615:8658)	chr6:106974674-119625836(probes 8597:8672)	0.049012	   0.049012		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	1	0	1	1	0	1	0	0	0	0	1	0	0	1	0	1	0	1	0	0	0	0	0	1	1	1	0	0	0	0	1	0	0	0	0	0	0	1	1	0	1	0	0	1	1	1	0	1	0	0	0	0	1	0	0	1	0	0	0	1	0	0	0	0	0	0	1	1	1	1	0	1	1	1	0	1	
Deletion Peak  9	8p22   	chr8:1-31636712(probes 10017:10169)            	chr8:16715659-17786984(probes 10071:10074)  	chr8:1-35338054(probes 10017:10231)            	7.1775e-06	 7.1775e-06		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	1	0	1	0	0	0	0	0	0	0	1	0	0	1	0	0	0	1	0	1	0	1	0	0	1	0	0	0	0	1	1	0	1	1	1	1	1	0	0	1	0	0	1	1	0	0	1	0	0	1	1	1	1	1	1	0	1	0	0	0	0	0	1	0	0	1	1	1	0	0	1	0	1	1	1	1	0	1	0	0	1	1	0	0	1	0	1	0	0	0	1	1	0	0	0	1	1	1	0	0	0	0	1	1	1	1	1	1	1	0	0	1	
Deletion Peak 10	9p21.3 	chr9:21964593-22024723(probes 11809:11820)  	chr9:21973950-21998310(probes 11814:11817)  	chr9:20952233-24116907(probes 11732:11896)  	2.412e-52	  2.412e-52		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	1	1	1	0	1	1	1	0	2	1	0	2	0	1	1	0	1	0	0	0	0	1	2	1	0	2	1	2	2	1	0	1	0	2	0	2	1	2	0	0	2	1	0	0	2	2	0	0	0	0	1	0	1	1	1	0	0	1	0	1	0	2	2	0	0	0	2	0	0	0	0	2	1	0	0	2	1	0	1	1	1	0	0	1	2	0	0	0	0	1	1	1	1	0	0	1	0	0	0	2	1	0	1	0	0	1	0	2	2	1	1	2	
Deletion Peak 11	13q14.2	chr13:47328496-51676610(probes 15993:16040)	chr13:48909600-49102445(probes 16015:16020)	chr13:38877301-53419272(probes 15918:16059)	8.0013e-06	 8.0013e-06		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	1	1	0	0	1	0	0	0	1	1	0	0	1	1	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	2	0	1	0	0	1	0	0	1	1	1	0	1	0	0	1	1	0	1	1	0	0	1	0	0	0	1	1	1	0	0	0	1	1	0	0	1	0	0	1	0	0	1	0	0	0	1	2	0	0	0	0	0	0	1	0	0	0	1	0	1	0	0	0	1	0	0	0	1	1	0	0	0	0	0	1	0	0	
Deletion Peak 12	15q12  	chr15:1-42987954(probes 17148:17225)       	chr15:25931333-31170354(probes 17163:17175)	chr15:25799958-33071258(probes 17161:17179)	0.043859	   0.043859		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	1	0	0	0	1	0	0	0	0	0	0	0	1	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	1	0	0	0	1	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	1	1	0	0	1	0	0	0	0	0	0	0	1	0	0	1	0	0	1	1	0	0	0	1	0	0	0	0	0	0	1	1	0	1	0	1	1	1	0	0	
Deletion Peak 13	17p12  	chr17:10232869-12759217(probes 18211:18241)	chr17:10869438-11689792(probes 18225:18232)	chr17:10723059-12629620(probes 18221:18239)	0.059527	   0.059527		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	1	0	1	0	1	2	0	1	0	0	1	1	1	0	1	0	0	1	0	1	0	1	0	1	0	1	0	0	1	1	0	0	0	1	0	1	0	1	1	1	0	0	0	0	0	1	0	1	0	1	1	0	1	0	0	1	0	1	0	0	0	1	1	0	0	0	0	0	1	1	1	0	1	1	0	1	0	0	0	1	1	1	0	1	0	0	1	1	1	0	0	1	0	0	1	0	0	0	1	0	2	1	0	0	1	1	0	0	
Amplification Peak  1 - CN values	1p34.2  	chr1:39396332-40714877(probes 256:281)        	chr1:40428006-40433921(probes 277:278)        	chr1:39479427-40890613(probes 257:283)      	0.027548	   0.027548		Actual Copy Change Given	-0.058671	-0.0070287	-0.031921	-0.0034179	-0.20304	-0.0069515	0.076288	0.0055883	0.0068098	-0.0096939	1.1958	-0.025718	0.028984	0.39252	-0.12754	0.52607	-0.011492	0.30086	0.048872	1.2067	1.3472	0.10655	-0.039611	-0.26309	2.4518	0.2842	-0.0033	-0.021472	0.011802	-0.38241	0.14584	-0.07711	-0.3856	0	0.53332	-0.0095769	2.0907	0.017986	-0.5122	2.8766	0.08329	0.50699	0	0.039451	-0.032671	0.0038802	0.02681	0.51006	-0.31542	-0.10506	0.037353	0.19275	0.27269	-0.12218	-0.21258	0.1246	0.03391	0.12388	-0.0022817	-0.0617	1.0764	-0.32124	0.015146	-0.0029204	0	0.016893	1.6476	0.013724	0	0.014105	0.0086464	0.0049931	0.079593	0.54298	0.33751	0.0091289	-0.023831	0.016938	-0.0056494	-0.12736	0.25978	0.17867	-0.1015	-0.29125	0.0012143	0.002892	0.040064	1.0383	-0.0083853	0.0015779	0.16911	-0.045434	0	-0.085517	0.13759	1.4071	0.0068276	6	0	0.00052927	0.52353	-0.24127	0.048039	0.015147	-0.043273	-0.0019866	-0.15312	-0.15098	0.026593	0.43467	-0.024682	0.50317	
Amplification Peak  2 - CN values	1q23.3  	chr1:160624317-161190721(probes 1043:1068)  	chr1:160887451-161070225(probes 1050:1057)  	chr1:158067621-174178027(probes 982:1260) 	7.5348e-09	 7.5348e-09		Actual Copy Change Given	3.0398	-0.0070287	5.1744	0.79361	0.2144	-0.0044718	1.4384	0.16355	0.0068098	-0.0033049	0.34429	0.58803	0.028984	0.24773	0.17857	0.52607	0.38107	0.31942	3.0439	6	0.59418	0.10655	-0.083897	0.027926	0.76852	0.015098	-0.0033	-0.021472	0.011802	0.45444	0.0099735	-0.05684	2.0067	1.3081	-0.038087	-0.0095769	0.43355	0.46097	-0.0089925	5.08	0.051444	0.0085219	1.8931	5.4307	-0.03273	0.0038802	-0.31191	0.11124	0.44606	1.3317	3.0568	1.3727	0.27269	-0.12895	0.37496	1.1153	-0.0052229	-0.08059	-0.0022817	2.3492	0.51148	0.52546	0.52375	0.86251	0	0.63414	0.20186	-0.18703	0.58139	0.014105	0.0086464	0.0049931	0.14323	3.4588	0.018995	0.70769	-0.023831	0.5384	0.22645	0.040103	2.2496	0.17867	0.4849	-0.29125	1.4064	0.002892	0.033202	0.027636	1.1836e-06	0.0015779	-0.30472	0.65219	0	-0.085517	0.13759	0.047363	0.40311	0.74698	0.29667	0.00052927	0.49809	0.76794	0.63916	0.67591	4.2411	1.2554	0.83081	-0.40377	4.2136	0.48386	0.97998	0.023688	
Amplification Peak  3 - CN values	3p25.2  	chr3:11913848-12576749(probes 3406:3423)      	chr3:12037673-12181459(probes 3411:3412)      	chr3:8461505-17711296(probes 3359:3485)      	8.5225e-07	 8.5225e-07		Actual Copy Change Given	6	0.22608	0.40884	-0.055344	-0.046125	0.016909	1.2262	0.0033004	-0.0025319	0.01155	0.055484	-0.058235	0.01933	0.94755	-0.41008	0.54859	0.40731	0.85271	0.93658	-0.0067638	0.084552	-0.19764	-0.071647	0.63017	-0.22591	-0.0050188	1.1133	0.56018	0.0038926	0.45609	-0.25576	0.15225	4.8406	-0.55495	0.057048	0.73233	0.35423	0.44714	1.0245	1.9309	0.18737	-0.54457	1.7828	1.2539	0.050772	0.0548	0.34353	0.02255	-0.23931	2.3278	0.092001	0.010672	6	0.040358	0.15279	0.21198	0.025385	-0.28311	0.038442	0.35225	1.1105	-0.47092	-0.025517	0.26431	-0.012348	-0.19615	0.32553	0.647	0.0076227	0.016578	-0.49879	0.0076269	-0.0055645	2.6691	4.1609	0	-0.72118	-0.0023139	0.015798	0.036697	-0.13953	-0.061481	1.0357	0.0059035	0.19589	-0.60577	0.001907	0.027673	0.53568	-0.89856	1.471	0.52719	-0.32554	-0.18265	0.39341	0.0094215	-0.39731	0	0.29316	0.030583	0.55614	6	4.2707	0.0077506	0.52078	0.35214	0.7318	0.033833	-0.26679	0.5713	0.21651	0.51867	
Amplification Peak  4 - CN values	4q13.3  	chr4:68533744-78216278(probes 5306:5448)      	chr4:73630009-73651302(probes 5389:5390)      	chr4:73630009-73735315(probes 5389:5393)    	0.18938	    0.18938		Actual Copy Change Given	-0.022481	-0.023247	-0.096759	-0.026052	0	-0.0086807	0.23054	-0.0066146	-0.0078172	-0.019896	-0.33903	-0.007149	-0.00051404	-0.018776	0.073094	-0.092261	-0.39868	0.75847	-0.40549	-0.019067	1.8189	-0.38536	0.29416	-0.27979	-0.085515	0.012493	0.0037621	-0.29365	0.018935	-0.18061	-0.35514	-0.2783	-0.054851	0.48551	0	-0.015307	0	0.43874	-0.024852	3.9247	-0.047489	0.0028096	-0.087688	-0.26204	0.0080564	0.040246	-0.20533	-0.17059	0.31509	0.49362	0.01287	0	-0.014935	0.023064	-0.56254	-0.0045458	0.029213	-0.1313	-0.015571	0.086141	1.0827	-0.11808	0.012159	-0.00078447	-0.16974	-0.029202	-0.31788	-0.313	-0.26995	-0.019756	-0.048429	-0.017517	0.27654	-0.34457	-0.54435	-0.010057	0	-0.5758	-0.058653	0.0065994	0.46278	-0.10092	-0.074559	0.014054	-0.4625	0.45371	-0.018003	0	-0.0073548	-0.89213	-0.29077	0.44023	-0.77491	-0.094097	-0.26902	0.033823	0.8564	3.5111	0.0063982	-0.015881	-0.043639	-0.15532	1.7377	-0.01094	-0.021556	-0.0051028	-0.01804	-0.46317	-0.62491	-0.26408	-0.25949	0.58864	
Amplification Peak  5 - CN values	6p22.3  	chr6:17727193-23861197(probes 7901:7942)      	chr6:18898879-23785506(probes 7931:7941)      	chr6:11820586-24863098(probes 7766:7969)    	9.013e-06	  0.0077752		Actual Copy Change Given	-0.022411	0.0024964	0	-0.005226	0.1585	0	-0.18928	-0.001778	-0.0018683	-0.0074203	1.1899	-0.013859	0.068424	0.29319	-0.41924	0.088071	-0.39007	0.069426	-0.41198	2.2885	-0.0069109	0.13827	-0.11839	-0.11741	1.2158	0.00033457	-0.0037568	-0.29468	-0.033212	0.04294	0.78981	0	-0.040044	-0.0092878	0.58414	0.00062791	-0.39866	0.43764	3.6376	0.61044	-0.049597	-0.56078	6	6	-0.091779	-0.060112	-0.29556	-0.35726	0.93184	0.18068	0.040959	0.52642	0.26173	0	-0.28726	0.76084	-0.014858	0.048297	0.016331	0	-0.6358	-0.79316	0.0076576	0.0029827	1.8934	0.00043395	0.09197	-0.29753	0.28559	0.0089669	-0.49376	0.010497	-0.36793	6	-0.28082	-0.0010764	-0.72652	0.011418	0.44245	0.19998	0.72765	0.088383	0.47569	0.098127	3.0256	0	-0.011625	0.016633	0.012541	0.023633	-0.018303	4.0998	0.10746	0.45122	0.14058	0.53304	0.00103	0.35749	-0.14311	0.012992	-0.014998	0	0.6951	0.090522	-1.1778	-0.029386	-0.022054	0.32472	-0.26443	0.93913	0.19387	1.1089	
Amplification Peak  6 - CN values	6p22.3  	chr6:19262639-24823672(probes 7941:7966)      	chr6:19329930-23861198(probes 7942:7943)      	chr6:11820586-24863098(probes 7766:7969)    	0.00015209	  0.0036879		Actual Copy Change Given	-0.022411	0.0024964	-0.039598	-0.005226	0.1585	0	-0.18928	-0.001778	-0.0018683	-0.0074203	1.4641	-0.013859	0.068424	0.0043423	-0.41924	1.2675	-0.39007	0.037826	-0.41198	-0.047019	-0.0069109	0.13827	-0.11839	-0.11741	-0.026091	0.00033457	-0.0037568	-0.29468	-0.033212	0.04294	0.37153	0	-0.040044	-0.0092878	0.58414	0.00062791	-0.04491	0.43764	1.6248	0.61044	-0.049597	-0.56078	6	-0.14328	-0.091779	-0.060112	-0.29556	-0.35726	-0.37937	1.0835	0.040959	0.52642	0.26173	0	-0.28726	0.76084	-0.014858	0.048297	0.016331	0	-0.6358	-0.29364	0.0076576	0.0029827	0.053273	0.00043395	0.09197	1.8827	0.28559	0.0089669	-0.54524	0.010497	0.015581	1.5817	-0.28082	-0.0010764	-0.72652	0.011418	0.19073	-0.40242	0.72765	0.088383	0.47569	0.098127	0.0247	0	-0.011625	0.016633	0.012541	0.023633	-0.018303	5.1928	0.10746	0.45122	0.14058	0.53304	0.00103	0.35749	-0.14311	0.012992	-0.014998	0	0.6951	0.090522	4.5796	-0.029386	-0.022054	6	-0.26443	-0.3556	0.19387	2.6316	
Amplification Peak  7 - CN values	7p11.2  	chr7:54594326-55726666(probes 9422:9447)      	chr7:54801843-55095530(probes 9429:9434)      	chr7:52223250-64075504(probes 9377:9482)    	1.3064e-06	 1.3064e-06		Actual Copy Change Given	0.70531	0.013688	0.40362	-0.015861	0.55263	0.012214	1.1712	0.027365	-0.0038714	0.0019102	0.002147	0.011763	0.026678	0.39374	0.2837	0.38932	0.513	0.57556	0.039653	6	0.13169	-0.085181	0.84093	-0.25927	0.4346	-0.002068	-0.014042	0.5346	-0.0041965	0.43483	6	0.45304	-0.043845	0.49708	0.054157	0.03219	0.30363	2.5805	0.024612	0.52253	0.050154	-0.0033647	0.49043	-0.10192	0.040846	0.02288	0.49711	0.14643	0.47545	0.74741	0.62499	0.48823	0.65024	-0.0108	0.05035	0.31842	-0.011712	0.00017767	0.028873	0.35428	0.51981	0.058019	0.0079797	0.11928	0.21795	-0.023126	0.50917	6	3.3134	0	6	0.0017674	-0.034405	0.53523	-0.26324	0.0019384	0.028185	0.00021135	0.090567	0.21086	0.49243	0.10948	1.574	0.0061869	0.010086	0.014573	0.0029043	-0.03072	0.015886	0.023342	0.020966	-0.018288	0.25553	0.93348	-0.044421	0.47892	-0.027632	0.42151	0.0025704	-0.018285	0.51026	-0.0073497	6	0.020957	0.90222	6	-0.22449	0.37091	0.042152	0.10538	-0.014863	0.99492	
Amplification Peak  8 - CN values	8p11.23 	chr8:37127703-37944323(probes 10304:10347)    	chr8:37588240-37589461(probes 10335:10336)    	chr8:36028752-39711647(probes 10261:10415)  	0.00036289	 0.00036289		Actual Copy Change Given	-0.35579	0.014303	0.38782	0.72214	-0.059485	0.0016297	0.39477	-0.0041376	0	0.0088282	-0.3637	-0.038887	0	-0.63086	-0.066382	-0.051685	-0.24412	0.83599	0.060157	-0.41378	-0.13525	-0.64274	0.88698	0.015768	-0.076636	0.19748	0.011368	0.40161	-0.014968	-0.85339	-0.3077	-0.004735	-0.4143	-0.58339	0.40668	-0.0051542	-0.38442	0.46249	-0.077142	-0.15407	0.039781	0.0091999	-0.59691	1.3242	0	0.027237	-0.3156	0.2049	-0.035362	2.1643	1.0907	-0.55527	-0.36898	0.13415	-0.61567	1.3895	-0.55452	0.04557	0.0040545	-0.0071013	1.6541	0.064571	0.13096	0.078792	0.012669	-0.010107	-0.34489	-0.6524	1.4355	0.032212	-0.52803	-0.0034942	0.68991	0.75583	-0.24084	2.6043	-0.72746	-0.5785	-0.26349	0.62402	3.3032	0.23173	1.0544	0.0025418	-0.45836	0.014855	-0.52528	0.073429	0.50853	-0.0047482	1.529	4.4915	0.20994	0.44691	0.030086	1.2547	-0.40068	1.3597	-0.14916	-0.24043	-0.013415	1.8467	0.55931	6	-0.09427	-0.02901	-0.48753	-0.69947	-1.0432	0.26349	-0.29259	6	
Amplification Peak  9 - CN values	8q22.3  	chr8:100146645-103355705(probes 11038:11113)	chr8:102013118-102196067(probes 11077:11084)	chr8:97766676-107514570(probes 10995:11171)	1.476e-06	  1.476e-06		Actual Copy Change Given	3.2203	-0.0076872	0.77776	0.72214	-0.023739	0.0016297	0.39477	-0.0041376	0	0.0088282	0.0079863	0.1437	0	1.4009	0.37562	0.42921	0.22909	4.3845	0.060157	1.1819	-0.13525	1.6376	0.41369	0.015768	0.70526	0.21976	0.011368	0.40161	0.902	0.01789	0.30623	-0.004735	4.5604	0.51615	0.32339	-0.0051542	0.20165	0.44249	6	4.1102	0.079029	0.0091999	1.1112	0.5675	2.2895	0.027237	0.055632	0.25805	0.1958	2.3002	2.5954	-0.52429	0.30268	0.13735	0.18727	0.33843	-0.030787	0.21514	0.0040545	5.642	1.6541	0.064571	0.019257	0.078792	0.012669	-0.010107	0.86522	0.48131	0.18881	0.032212	-0.013735	1.6507	5.1191	4.8296	-0.24084	0.0038059	0.0077234	-0.014398	1.6624	0.902	-0.065077	-0.077575	1.0182	0.0025418	-0.027802	0.014855	1.2959	0.054427	0.50853	0.015631	1.7002	1.6263	0.20994	0.91803	0.030086	1.3401	0.35934	0.014164	0.46867	0.19223	1.6901	1.8467	0.61928	0.13287	1.0943	0.38202	-0.0053348	0.87832	1.2296	0.80476	0.57978	0.011766	
Amplification Peak 10 - CN values	10p14   	chr10:4082074-10859662(probes 12435:12486)    	chr10:8070939-8081931(probes 12462:12463)      	chr10:6133931-9837060(probes 12449:12478)    	0.048051	   0.048051		Actual Copy Change Given	0.68036	0.020938	0.7457	-0.01095	0.13704	0.0051083	1.1088	-0.004384	0.0092816	2.6167	1.1072	0.010256	-0.20325	0.2958	0	-0.6518	0.42849	1.2391	-0.0053202	0.32604	0.069337	-0.43921	0.15537	0.005943	0.48236	-0.21924	0.5542	0.56372	-0.034229	0.073866	0.22698	-0.023608	-0.38762	0.95854	0.85318	0.0049303	0.63382	0.86355	0.5105	-0.0045884	-0.076111	-0.0054496	2.2801	1.9348	0.053487	-0.042169	3.9487	-0.14313	-0.32012	0.51515	-0.050246	0.54951	0.58987	-0.048504	0.013862	-0.15193	0.88703	-0.052095	-0.010103	0.75871	-0.050188	-0.36964	0.0058536	0.0053226	0.21287	-0.61615	0.037284	0.33526	-0.16856	-0.02152	1.5499	-0.0029237	1.0292	0.69967	0.020333	-0.0022407	-0.019017	-0.051765	0.30246	0.0024617	6	0.11918	1.0314	0.35327	0.044485	-5.9682e-05	0.060905	-0.98755	1.1072	-0.16124	0.14437	1.928	-0.87323	-0.081002	0.0013945	0.9869	-0.030171	0.36015	-0.001955	-0.0063947	1.1376	-0.00218	0.63923	0.083709	0.55048	1.1746	-0.001015	0.062318	0.057493	0.5755	0.67931	-0.02639	
Amplification Peak 11 - CN values	11q13.3 	chr11:70102480-70428787(probes 13926:13945)  	chr11:70219906-70402506(probes 13933:13940)  	chr11:67285060-71281718(probes 13846:13965)	2.8499e-09	 2.8499e-09		Actual Copy Change Given	-0.22021	-0.011792	1.5034	-0.012461	0.20454	-0.010556	-0.0097111	0.00046231	0.0012054	0.0035738	0.0021831	0.0010122	0.0038452	-0.051055	0.44983	0.49682	0	-0.0059985	3.6923	0.79634	-0.070191	0	0.074357	-0.0029471	0.19059	0.015814	-0.57179	1.7027	-0.037611	0.0035772	0.28557	0.15761	0.59828	6	-0.054431	-0.023283	0.34728	6	0.43437	-0.12233	0.057805	0.0092946	-0.45148	-0.55617	0.051658	0.01757	0.017231	0.021199	0.19254	0.36917	-0.0094075	0.95302	-0.32983	-0.14608	0.074413	0.055823	0.022182	0.11444	-0.00063041	0.40346	0.49376	0.059682	0.0032377	0.015471	0.061797	0	1.1857	0.41806	0.59485	-0.016898	0.0097687	-0.012603	0.25136	0.66596	-0.28097	0.00053933	0.0046395	0.0057994	0.20719	-0.030301	0.0017684	0.070253	-0.095561	0.012899	-0.017789	0.0064877	0	-0.0064147	5.3427	6	0.72091	-0.10366	0.046441	0.39184	-0.044164	1.623	0.0010735	0.61788	-0.14535	0.03061	6	6	0.60599	-0.024988	0.48818	0.39425	0.028802	0.32021	2.8438	0.036783	0.18096	5.2834	
Amplification Peak 12 - CN values	12q15   	chr12:69121869-70436774(probes 15269:15304)  	chr12:69183509-69479730(probes 15280:15285)  	chr12:68945934-73509949(probes 15264:15332)	4.8476e-06	 4.8476e-06		Actual Copy Change Given	0.38	-0.0033875	0.26309	0.77127	6	-0.003419	0	0.024827	0.90496	0.084935	0.36534	0.0079909	0.00048951	0	0.19528	0	0.2394	-0.23518	-0.049692	0.0080596	0.26972	-0.37008	6	0.032688	0	0.014109	1.2412	0.2685	0.94359	1.3691	-0.33902	0.57853	0.71365	-0.070781	-0.44742	-0.0098493	0.29826	0.43144	0.52098	6	-0.0064718	0.0024102	0.41581	0.79555	-0.0044868	-0.021665	0.044196	0.21458	-0.032049	-0.29285	0	-0.010826	-0.0071168	0.019098	0.085154	-0.01034	-0.13008	0.10096	0	-0.023659	-0.046752	-0.33974	0	-0.0048331	0.050537	-0.00069374	0.10566	-0.35797	-0.054749	0.029953	0	0.0083752	-0.012665	-0.017202	-0.26959	0.0071576	0.012788	-0.56107	-0.00040599	-0.19394	-0.0026295	-0.67297	-0.078104	-0.0067843	0.46062	-0.00077993	6	0.11155	0.012628	0.0056581	0.022987	0.54683	0.10102	0.41887	-0.04622	6	0	-0.017327	-0.0023855	0	0	0.15358	0.69547	0	-0.61271	0	0.0053765	0.12105	5.2084	1.0852	-0.0020087	1.5488	
Amplification Peak 13 - CN values	16p13.2 	chr16:6480817-13296512(probes 17605:17681)    	chr16:8621585-9287725(probes 17627:17631)      	chr16:7668794-9966764(probes 17614:17637)    	0.056724	    0.18528		Actual Copy Change Given	-0.15936	0.0070419	-0.42658	-0.0071042	0.12023	0.01981	-0.29276	-0.0033834	0.0037329	0.012565	-0.38118	0.038532	-0.031654	-0.2196	0.17462	0.51343	-0.36689	-0.11908	-0.86204	-0.40034	-0.095144	0.026453	0.0039873	-0.029713	-0.33501	-0.014433	-0.025146	0.023862	0.0049361	-0.26899	-0.27271	-0.018614	1.082	-0.55828	1.9813	0.010212	-0.37675	0.0016413	-0.039477	-0.5641	0.17489	0.016687	-0.50229	0.066457	0.12127	0.030325	-0.41032	-0.02389	0.1592	-0.62099	0.14644	0.47244	5.951	-0.013309	-0.16397	-0.030511	0.97665	-0.25962	-0.0088613	0.32856	-0.68577	0.085865	-0.0092108	-0.0067931	-0.16765	0.0013259	-0.13415	-0.19033	-0.027505	-0.035714	-0.01188	-0.0064402	4.6616	0.19019	-0.033458	-0.0027806	-0.0025502	0.018494	-0.21958	-0.016479	4.7241	-0.076542	0.4229	-0.047102	-0.45254	0.00047477	0.0038894	-0.013723	0.0054655	-0.024185	0.9303	0	0.047484	0.39983	-0.045332	-0.026613	-0.029123	-0.036122	-0.15508	-0.016934	-0.033639	0.25954	-0.24751	-0.84354	0.41657	-0.040833	0.00023349	-0.26945	0.041771	0.47407	-0.28559	-0.019542	
Amplification Peak 14 - CN values	16p12.1 	chr16:23852373-27102172(probes 17734:17772)  	chr16:24657583-24792887(probes 17743:17744)  	chr16:23465398-27102171(probes 17729:17771)	0.0069281	   0.033159		Actual Copy Change Given	-0.15936	0.0070419	1.9123	-0.0071042	0.12023	0.0091494	-0.25204	-0.0033834	0.0037329	0.012565	0.29489	0.038532	-0.031654	0.033501	0.17462	1.0509	0.013711	0.40112	0	-0.40034	-0.095144	0.026453	0.0039873	-0.029713	-0.33501	-0.014433	-0.025146	0.023862	0.0049361	-0.26899	0.39689	-0.018614	-0.26793	-0.46707	1.5027	0.010212	-0.37675	0.0016413	-0.039477	0.40127	0.11796	0.016687	5.6131	-0.47893	0.069666	0.030325	-0.41032	0.059572	0.1592	-0.07019	1.1337	0.47244	-0.090746	-0.013309	-0.16397	-0.030511	1.7959	-0.25962	-0.0088613	0.32856	-0.68577	0.085865	-0.0092108	-0.0067931	-0.16765	0.0013259	-0.13415	0.56529	-0.027505	-0.035714	-0.026268	-0.0064402	0.3063	0.63763	-0.033458	-0.0027806	-0.0025502	0.018494	-0.21958	-0.016479	5.7933	-0.076542	0.4229	-0.047102	0.50814	0.00047477	0.0038894	-0.013723	0.0054655	-0.024185	0.13333	0	0.047484	0.39983	-0.045332	-0.026613	-0.029123	-0.070958	-0.15508	-0.016934	-0.038672	0.25954	6	-0.84354	0.92479	-0.040833	0.00023349	-0.26945	0.041771	-0.7898	0.23626	-0.019542	
Amplification Peak 15 - CN values	17q11.2 	chr17:20979844-34943690(probes 18337:18507)  	chr17:30963456-31203334(probes 18466:18471)  	chr17:30963456-31286561(probes 18466:18476)	0.16176	    0.19889		Actual Copy Change Given	0.10354	0.017772	0.3188	1.4234	0.30592	-0.0010627	-0.47673	0.0059096	0.92813	0.63431	0.33138	-0.025401	0.10435	0.1282	-0.12206	-0.033402	0.0098738	0.40974	1.2796	0.0051725	-0.20657	0.10799	0.045487	0.7051	6	0.018215	0.51869	0.30749	-0.025908	0.12291	-0.036003	-0.20751	0.28871	0.0034421	0.066446	1.4085	-0.046827	-7.3575e-05	1.4937	6	-0.073334	-0.56379	-0.10688	0.65103	-0.11797	-0.075879	0.083575	0.17919	0.30334	-0.58776	0.39672	-0.04789	-0.089227	0.025007	-0.27409	-0.1061	-0.01808	0.13714	0.047326	0.34867	0.54982	0.09721	-0.011542	0.0013336	0.018739	0.020659	0.1902	0.27997	0.17777	0.0089342	0.56366	0.0043432	0.30928	0.62785	0.028229	0.00064541	-0.73703	0.04934	0.34615	0.30754	0.001672	-0.24191	0.44645	0.091933	-0.47768	-0.011194	0.0059881	0.0028633	-0.0038532	-0.017284	0.088269	0.54316	0.063929	-0.077491	0.015595	0	0.0035315	1.2663	0.26663	0.001772	-0.0045649	0.32039	0.15369	0.049269	0.9623	0.79194	0	0.87378	0.35341	0.65067	0.23499	0.45216	
Amplification Peak 16 - CN values	17q12   	chr17:37807774-38014602(probes 18561:18579)  	chr17:37897401-37900661(probes 18570:18571)  	chr17:37681232-38177005(probes 18552:18582)	0.0003015	 0.00097007		Actual Copy Change Given	1.3502	0.017772	0.3188	1.4234	0.30592	-0.0010627	-0.47673	0.0059096	0.92813	0.63431	0.33138	-0.025401	0.10435	0.1282	-0.12206	-0.57302	0.0098738	0.40974	0.071626	0.0051725	0.73511	0.10799	0.045487	0.37466	-0.35703	0.018215	0.51869	0.30749	-0.025908	0.12291	-0.036003	-0.20751	6	0.0034421	0.066446	1.4085	-0.046827	6	6	0.7474	-0.073334	0.008591	-0.057821	0.65103	-0.11797	-0.075879	0.083575	0.076256	0.16749	6	-0.075879	-0.04789	-0.089227	0.025007	-0.27409	-0.1061	-0.01808	0.13714	0.047326	0.34867	0.54982	0.09721	-0.011542	0.0013336	0.018739	0.020659	0.1902	0.06737	0.17777	0.0089342	0.016407	0.0043432	0.30928	0.62785	-0.024103	0.00064541	-0.73703	0.04934	0.34615	0.30754	0.001672	-0.24191	0.44645	0.091933	0.054801	-0.011194	0.0059881	0.0028633	-0.0038532	-0.017284	0.088269	-0.059503	0.063929	-0.077491	0.015595	0	0.0035315	-0.041342	0.26663	0.001772	-0.0045649	0.32039	-0.52671	0.049269	2.9729	0.79194	0	6	0.35341	0.65067	0.23499	0.45216	
Amplification Peak 17 - CN values	19q12   	chr19:30021330-30821093(probes 19814:19845)  	chr19:30479134-30522387(probes 19831:19832)  	chr19:29216916-32990865(probes 19785:19889)	2.9408e-06	 0.00019258		Actual Copy Change Given	-0.097432	0.0024032	0.31711	0.64163	-0.026423	-0.0034741	0.95272	0.3454	-0.0066445	-0.017341	0.061122	-0.0012982	-0.039604	0.63999	0.13744	2.89	0.31018	6	-0.40704	-0.024652	-0.15742	0.33898	0.79795	0.047982	0.41784	-0.015206	0.50265	0.37075	-0.03671	-0.060876	1.2726	-0.031672	-0.21514	0.93889	0.049417	0.73765	2.182	-0.0067422	0.50794	6	-0.068849	0.5457	-0.26076	4.3067	-0.077049	-0.061976	1.0853	0.039256	-0.12097	3.9518	0.0025522	0.44739	-0.090636	-0.13827	-0.2293	-0.0047728	0.0065858	0.068574	0.019878	0.3951	-0.069847	0.068663	-0.025716	0.0070224	0.77756	0.015447	0.027084	0.024417	-0.025624	0.80521	-0.0011936	-0.0054563	0	1.8587	0.58681	0.007818	0.03328	-0.59475	-0.047976	-0.02073	1.3271	0.19579	0.41316	-0.097616	0.39606	-0.029919	0.015438	-0.068072	-0.03839	-0.06079	0.4832	4.8289	0.026819	-0.073574	0	0.43879	-0.027275	0.24683	0.24842	-0.0054608	-0.065314	0.45022	4.8311	0.099051	5.3029	1.8151	0.015066	0.49521	0.71377	0.12087	0.78752	-0.029741	
Amplification Peak 18 - CN values	19q13.2 	chr19:37953039-41225744(probes 19992:20047)  	chr19:39279384-39348459(probes 20007:20010)  	chr19:38026423-41158370(probes 19993:20045)	0.00025063	   0.041071		Actual Copy Change Given	-0.097432	0.0024032	0.31711	0.64163	-0.026423	-0.0034741	0.95272	0.3454	-0.0066445	-0.017341	3.6637	-0.0012982	-0.039604	0.5578	0.13744	4.1107	0.31018	2.2661	-0.40704	-0.4261	-0.15742	0.33898	0.79795	0.057811	1.9752	-0.015206	0.50265	0.37075	-0.03671	-0.060876	-0.28738	-0.031672	0.30139	0.52853	0.049417	0.73765	-0.43382	3.5733	0.50794	6	-0.068849	0.5457	-0.094344	3.4649	-0.077049	-0.061976	1.7183	0.1053	-0.12097	6	0.0025522	0.44739	-0.090636	-0.13827	-0.31179	-0.0047728	0.0065858	0.068574	0.019878	0.3951	-0.084005	0.068663	-0.025716	0.0070224	0.11113	0.015447	0.027084	0.024417	-0.025624	0.042316	-0.0011936	-0.0054563	0	3.4872	1.1564	0.007818	0.03328	-0.50628	-0.047976	-0.02073	2.2576	0.19579	0.41316	-0.097616	0.94264	-0.029919	0.015438	-0.068072	-0.03839	-0.06079	-0.45283	1.0225	0.026819	-0.073574	0	1.045	-0.027275	0.24683	0.24842	-0.0054608	0.60263	0.45022	0.54038	0.099051	0.85527	0.75057	0.015066	0.49521	0.71377	0.12087	0.78752	-0.011921	
Amplification Peak 19 - CN values	20q11.21	chr20:25328497-30866238(probes 20388:20406)  	chr20:25328498-30329932(probes 20389:20399)  	chr20:25328498-30674492(probes 20389:20402)	0.1314	     0.1314		Actual Copy Change Given	0.33134	-0.026446	0.37792	1.5027	0.52933	0.016087	0.053554	-0.0049276	0.8841	0.65526	0.35832	0.17957	-0.0081545	0.023634	0.19476	0.0021472	0.016518	0.36472	-0.040058	-0.018057	0.10071	0.61566	1.5061	0.1756	1.1213	-0.0054995	0.537	0.56715	-0.017251	0.41618	0.36371	0.29769	0.33721	0.66602	0.041067	-0.00026406	-0.38918	0.44767	1.5062	0.85555	0.16356	0.01614	0.49396	0.44297	0.071045	0.033971	0.36114	-0.16572	0.75802	0.41836	0.85809	1.5124	0.31077	0.22674	0.14188	0.47338	3.011	0.57214	0.011163	1.1637	0.54561	0.10851	-0.041428	-0.001599	0.13364	-0.00091617	0.21518	0.35297	0.25695	0.017205	0.22228	-7.6927e-05	1.1936	0.30676	0.62439	-0.0048759	0.089021	0.0047427	0.21576	0.49197	0.40541	0.25314	0.46916	0.56873	0.91886	0.5436	0.55344	-0.019082	0.041359	-0.004869	0.053441	2.7233	1.3289	0.94914	0.38785	0.51034	-0.020322	0.41425	0.13779	0.019141	5.2385	0.51748	0.66706	0.88913	0.91462	0.36943	0.18732	0.52822	1.1775	1.7155	0.6964	1.4991	
Amplification Peak 20 - CN values	22q12.1 	chr22:1-27271918(probes 20983:21030)         	chr22:25346602-26296525(probes 21004:21013)  	chr22:25346602-26412431(probes 21004:21016)	0.14087	    0.14087		Actual Copy Change Given	0.17844	0.0093838	3.7248	-0.0059536	-0.27764	0.0095957	0.02	0.0030693	0.0060511	-0.0037653	-0.17589	0.0257	0.031294	0.17907	0.0061126	-0.048678	0.22005	0.0077194	0.027686	0.38785	0	-0.41216	1.5562	-0.0254	-0.031269	0.0035307	1.0608	-0.014035	0.0068487	-0.26011	-0.33654	-0.054484	-0.030943	-0.55641	-0.93311	-0.023859	-0.076927	0.0047105	0.4948	-0.6283	-0.035576	-0.028032	0.044109	0.56843	0.13594	-0.05757	-0.29629	-0.070207	-0.32473	0.74127	0.26898	-0.0682	1.5282	-0.37008	-0.24742	0.11051	-0.60339	0.11258	0.0020395	-0.044272	-0.69338	-0.35841	-0.020647	0.017357	-0.17376	-0.60795	-0.33232	6	0.13402	-0.0086871	-0.49026	-0.0025389	-0.01487	-0.18274	0.22431	-0.0046427	0.77754	-0.5446	-0.024821	-0.016623	-0.4828	-0.12053	-0.11288	0.15782	1.3279	0.044058	0.007158	-0.030472	0.42281	-0.053042	4.2253	-0.090214	0.016039	0.36881	0.10148	0.15975	0.0025471	0.8048	-0.1547	-0.0099224	-0.014169	0.45756	-0.6363	-0.85355	0.34531	-0.040775	-0.0012942	0.61281	-0.35113	0.47444	-0.11645	-0.021976	
Deletion Peak  1 - CN values	2q22.1 	chr2:141719260-142020472(probes 2496:2523)	chr2:141918802-141936476(probes 2511:2512)	chr2:141689625-142154342(probes 2489:2535)	0.00065298	  0.0015751		Actual Copy Change Given	0.061673	-0.43976	-0.033522	-0.01104	-0.040296	0.0088109	0.28888	-0.0031811	-0.90537	0.0027114	-0.024802	-0.17532	-0.0098807	-0.10649	-0.85711	-0.58874	0.40233	0.13191	-0.84697	-0.43671	0.046617	-0.13356	0.32669	0.035616	2.1051	0.0039354	-0.56761	-0.11539	0.0050091	-0.37164	-0.32944	0.03585	0.29096	-0.90609	-0.30912	0	-0.7462	0	0.47643	-0.35194	0.00926	0	-0.0082554	0.18198	0.29167	6.3975e-05	-0.64477	-0.42746	0.27326	0.15488	-0.40853	0.019601	0.2599	0.0069888	0.082733	-0.15207	-0.48903	-0.082586	0.0027916	-0.021064	-0.67175	-0.85783	0.026951	-0.014408	-0.053399	0.0027746	-0.72999	0	-0.11893	-0.010465	-0.0052183	-1.5	-0.14941	-0.35416	0.042053	0.00196	0.019958	0	-0.017691	0.18024	-0.44239	-0.017937	0	0	-1.4343	-1.2526	0.0055944	-0.9324	0.019754	0.0010628	-0.033559	-0.23003	-0.22534	-0.074637	-0.12963	-0.49335	0.00043597	-0.0057684	-0.14121	-0.003757	0.083275	-0.44946	-0.54873	-0.029334	-0.58622	0.21493	0.011146	-0.050951	0.095176	-0.23001	0	0.21072	
Deletion Peak  2 - CN values	2q36.3 	chr2:213561821-243199373(probes 3108:3316)	chr2:226228053-226330746(probes 3209:3210)	chr2:209557516-243199373(probes 3066:3316)	8.6613e-06	 1.4589e-05		Actual Copy Change Given	-0.085649	0.0067384	-0.45745	-0.0071712	-0.026972	0.0088109	-0.56999	0.023256	-0.88971	-0.64691	-0.024802	-0.13106	-0.0098807	-0.10649	-0.41819	-0.58874	0.40233	0.13191	-0.84159	-0.0027584	-0.20973	0.21911	-0.59863	0.041062	-0.28159	0.0086794	-0.58208	-0.11539	0.0050091	-0.37164	-0.32944	0.03585	-0.40353	-0.28644	-1.3626	-0.7033	-0.050011	-0.46257	-0.038352	0.40064	0.00926	0	-0.54594	-0.44852	0.061927	6.3975e-05	-0.64477	-0.052291	0.25628	0	-0.40853	-0.56149	0.22131	0.0069888	-0.58915	-0.21936	-0.52375	-0.082586	0.0027916	-0.021064	-0.68284	0.080593	-0.47412	-0.014408	-0.053399	-0.23355	-0.48681	0	-0.11893	-0.010465	-0.52265	-0.00020949	0.30535	-0.40394	-0.26024	0.00196	-0.72078	0	-0.050574	0.18024	-0.44239	-0.71704	0	0	-0.44598	0.014014	-0.49486	-0.94455	-0.024738	-0.049488	-0.033559	-0.6851	-0.30059	-0.074637	-0.12963	-1.0471	-0.35917	-0.0057684	-0.14121	-0.003757	-0.00077328	-0.44946	-0.54873	-0.029334	0.066292	-0.023718	0.011146	-0.38011	0.095176	-0.81545	-0.27271	-0.65308	
Deletion Peak  3 - CN values	3p12.3 	chr3:41449449-85171246(probes 3647:3961)    	chr3:74851549-75002284(probes 3849:3852)    	chr3:74851549-76158132(probes 3849:3864)    	0.080145	   0.080145		Actual Copy Change Given	-0.090451	0.22608	0.40396	-0.014112	-0.021639	0.016909	-0.3101	0.0033004	-0.0025319	0.01155	-0.32082	-0.70006	0.01933	-0.13903	-0.39605	-0.056363	0.39425	0.15155	0.50614	-0.0067638	0.084552	-0.19764	-0.11733	0.63017	6	-0.0050188	1.1133	0.56018	0.0038926	0.45609	-0.25576	0.16361	-0.41601	-1.1121	0.057048	-0.77749	0.35423	-0.0073758	-0.53345	0.052666	0.18737	-0.54457	0.032045	0.17635	0.087068	0	0.34353	-0.13438	-0.5198	2.1608	0.092001	0.045906	0.3004	0.43457	0.24748	0.26792	0.025385	-0.28311	0.038442	-0.026458	0.55628	-0.50876	-0.025517	0.26431	-0.012348	-0.62108	0.022088	-0.28537	0.0076227	0.016578	-0.54054	0	0.28851	-0.36554	0.057457	0	-0.71922	-0.0023139	0.015798	0.036697	0.47717	-0.061481	1.0179	-0.00039526	-0.46424	-0.60577	-0.56135	0.022146	0.023464	-0.89856	0.014946	-0.60718	-0.23877	-0.30536	0.39341	0.0094215	-0.39731	0	0.29316	0.030583	-0.039759	0.69346	-0.53459	0.0077506	-0.042639	0.36135	-0.25424	-1.2027	-0.63148	-0.75859	-0.28898	-0.49156	
Deletion Peak  4 - CN values	4q22.1 	chr4:91510636-92537601(probes 5618:5654)    	chr4:91795806-91872297(probes 5633:5634)    	chr4:91529433-92315174(probes 5619:5647)    	0.0063669	   0.020204		Actual Copy Change Given	0	-0.42835	-0.096759	-0.026052	0	-0.030825	-0.11697	-0.0066146	-0.0078172	-0.019896	-1.0592	-0.15254	-0.00051404	-0.018776	0.073094	-0.092261	-0.39868	-0.18184	-0.40549	-0.34668	-0.060207	-0.38536	0.21896	-0.27979	-0.085515	-0.0004285	0.0037621	-0.29365	0.018935	-0.18061	-0.35514	-0.2783	-0.39435	0.2752	0	-0.015307	-0.3399	0.43874	-0.024852	-1.0072	-0.047489	0.0028096	-0.25098	-0.74752	0.27744	0.040246	0.10295	-0.25591	-0.22619	-0.14608	-0.40732	0	-0.037919	-0.33432	-0.56254	-0.0045458	0.029213	-0.1313	-0.015571	0.086141	-0.6657	-0.9637	-0.69105	-0.00078447	-0.16974	-0.029202	0.010414	-0.313	-0.27182	-0.019756	-0.048429	0.0077594	0.27654	-0.33164	-0.53121	-0.010057	0	-0.5758	-0.19922	0.0065994	-0.00095261	-0.10092	-0.074559	0.014054	-0.4625	0.24441	-0.016749	-0.96753	-0.0073548	-0.89213	-0.0052968	-0.17682	-0.75377	-0.094097	-0.26902	0.033823	0.37949	-0.4428	0.0063982	-0.015881	-0.043639	-0.15532	0.1817	-0.01094	0	-0.0051028	-0.01804	-0.46317	-1.1422	-0.25836	-0.25949	-0.48319	
Deletion Peak  5 - CN values	4q34.3 	chr4:155656891-191154276(probes 6172:6341)	chr4:180336313-182164889(probes 6288:6297)	chr4:175886313-183250569(probes 6270:6317)	0.033936	    0.15941		Actual Copy Change Given	0	-0.019357	-0.42537	-0.026052	-0.022593	-0.030825	-0.59356	-0.0066146	-0.016008	-0.019896	-0.34107	-0.14953	-0.00051404	-0.018776	0.073094	-0.092261	-0.39868	-0.19188	-0.40549	-0.020174	-0.060207	-0.36417	0.27245	-0.27062	-0.085515	-0.0004285	0.0037621	-0.29365	-0.0047467	-0.18061	-0.35514	-0.2783	-0.39435	0.2752	0	-0.015307	-0.37877	-0.013292	-0.024852	0.38614	-0.18443	0.0028096	-0.13391	-0.74758	-0.012641	-0.072179	-0.22513	-0.094721	-0.31336	-0.29255	-0.40732	0	-0.14171	0.11908	-0.65403	-0.08714	0.029213	-0.1313	-0.015571	0.086141	-0.63805	-0.83549	0.015468	-0.00078447	-0.16974	-0.029202	-0.17029	-0.313	-0.12804	-0.019756	-0.048429	0.0077594	0.23189	-0.036537	-0.54232	-0.010057	-0.73879	-0.5758	-0.055433	-0.028906	0.51236	0.35221	-0.097945	-0.0099225	-0.46415	-0.091109	-0.019025	-0.96753	-0.0073548	-0.89213	-0.49819	-1.2898	-0.77187	-0.094097	-0.26902	0.0053093	-0.37727	-0.79594	0.0063982	0.22164	-0.026364	-0.73592	-0.53563	-0.01094	-0.035967	-0.099979	-0.01804	-1.0476	-0.61524	-0.69795	-0.25949	-0.48319	
Deletion Peak  6 - CN values	5q12.1 	chr5:45373655-78981219(probes 6712:6952)    	chr5:59114477-59132728(probes 6832:6833)    	chr5:59046403-59470068(probes 6828:6844)    	0.041919	   0.041919		Actual Copy Change Given	-0.38685	-0.4286	-0.92998	0.53664	-0.17259	-0.002352	-0.42755	0	0.89254	-0.020156	-0.35173	-0.51896	-0.0087869	-0.13288	-0.11604	-1.282	-0.42355	-0.19597	-0.38375	-0.39824	-0.20192	0.0069786	-0.6212	-0.29771	-0.33966	-0.0047788	0.56467	-0.62976	-0.86081	-0.0091726	-0.04464	-0.0024111	-0.046421	0.47206	-0.53411	-0.0081534	0.005602	-0.4525	-0.018948	-1.1605	-0.014006	0.00265	1.294	-0.548	-0.011479	0.024669	0	-0.1416	0.0098189	-0.28181	-0.81363	-0.25408	-0.32131	-0.36155	-0.20419	-0.17592	-0.55526	-0.28617	0.018235	-0.3959	-0.68339	-0.3642	-0.69881	-0.00026287	-0.049831	0.0065705	-0.79883	-0.35921	0.036106	-0.014897	-0.5082	-0.02003	-0.010551	-0.34723	-0.5672	-0.69001	-0.71954	0.0063751	-0.11331	0	-0.43426	-0.69685	0.46797	0.010824	-0.41178	0.014669	-0.011645	0.010562	0.0032131	-0.88391	0.048581	-0.67992	-0.28249	0.4538	-0.14804	0.060016	-0.0063881	-0.4528	-0.14023	-0.0036013	0.0085824	-0.021285	-0.54629	-0.90361	0.067583	-0.40786	-0.21804	-0.39908	-0.66168	-0.76458	-0.0090449	-0.46169	
Deletion Peak  7 - CN values	6p25.3 	chr6:1-5266921(probes 7596:7662)                	chr6:1-1875640(probes 7596:7611)                	chr6:1-2054356(probes 7596:7614)                	0.16006	    0.16006		Actual Copy Change Given	-0.022411	0.0024964	0	-0.005226	0.1585	0	0.82647	-0.001778	-0.0018683	-0.0074203	-0.030922	0.054098	0.068424	0.15211	-0.41924	-1.2371	-0.39007	-0.18977	-0.41198	1.5422	-0.0069109	0.13827	-0.031112	-0.39755	-0.028989	0.00033457	-0.0037568	-0.30335	-0.033212	0.04294	0.43241	0	-0.76966	-0.0092878	0.58414	0.00062791	0.28251	0.43764	-0.51131	0.61044	-0.049597	-0.56078	-0.67148	-0.19235	-0.091779	-0.060112	-0.29556	-0.00037945	-0.37647	0.18068	0.040959	-0.58181	0.26173	0	-0.28726	-0.15631	-0.014858	0.048297	0.016331	-0.69711	-0.6358	-0.043053	0.0076576	0.0029827	0.12611	-0.5995	0.09197	-0.29753	-0.18824	0.0089669	0.55412	0.010497	-0.36793	0.28957	-0.28082	-0.0010764	-0.72652	0.011418	-0.026646	0.19998	0.72765	0.088383	0.47569	0.098127	0.109	0	0.01015	-0.015825	0.012541	0.023633	-0.018303	0.99808	0.10746	-0.040664	0.14058	0.53304	0.00103	0.35749	-0.14311	0.012992	-0.60571	0	0.6951	0.058563	-0.66763	-0.029386	-0.022054	-0.4912	-0.26443	0.25455	-0.10315	1.6017	
Deletion Peak  8 - CN values	6q21   	chr6:89342867-122609798(probes 8526:8695)  	chr6:108463916-116939576(probes 8615:8658)	chr6:106974674-119625836(probes 8597:8672)	0.049012	   0.049012		Actual Copy Change Given	0.2841	0.0024964	-0.039598	-0.005226	0.20024	0	-0.21518	-0.001778	-0.0018683	-0.0074203	-0.11387	-0.80224	0.068424	0.028345	-0.03612	0.61842	-0.39007	-0.16034	-0.41198	-0.0055064	-0.14909	-0.18904	-0.11839	-0.25427	0.15022	-0.97193	7.3595e-06	-0.29468	-0.016435	-0.36441	-0.032737	0	0.45475	-0.051014	-0.91405	0.00062791	-0.37268	-0.0070525	-0.53215	-0.46068	-0.10777	-0.56078	0.38781	-0.080409	-0.070786	-0.028345	-0.31779	0.52819	-0.19654	-0.67711	-0.26366	-0.53064	-0.035454	-0.35852	-0.28726	0.10509	0.0019831	0.048297	0.0024574	-0.36608	-0.64525	-0.8164	0.0076576	0.0029827	0.053273	0.0025665	-0.57111	-0.031647	-0.10959	0.0089669	-0.016401	0.010497	-0.04024	-0.34992	-0.56429	-0.0010764	-0.72652	0.011418	-0.017598	-0.48767	-0.41298	-0.6799	-0.087171	-0.57834	0.0086656	-0.079556	-0.011625	0.016633	-0.55119	0.023633	-0.21875	-0.6534	0.10746	-0.27649	0.14058	-0.50617	0.00103	0.388	-0.28397	0.012992	-0.006284	0	-1.1351	-0.54385	-0.59334	-0.42478	-0.022054	-0.40257	-1.0468	-1.2658	-0.25079	-0.48634	
Deletion Peak  9 - CN values	8p22   	chr8:1-31636712(probes 10017:10169)            	chr8:16715659-17786984(probes 10071:10074)  	chr8:1-35338054(probes 10017:10231)            	7.1775e-06	 7.1775e-06		Actual Copy Change Given	-0.35579	0.014303	-0.44042	0.72214	-0.18105	0.0016297	0.39477	-0.0041376	-0.071572	0.0088282	-0.37406	-0.038887	0	-0.44362	-0.066382	-0.051685	-0.24412	-0.46045	-0.024996	-0.41378	-0.27037	-0.64274	0.88698	0.015768	-0.43383	-0.22662	0.011368	0.40161	-0.014968	-0.78822	-0.3077	-0.15984	-0.77567	-0.58339	-0.93342	-0.74746	-0.38442	-0.28651	-0.077142	-1.095	0.039781	0.0091999	-1.0282	-1.1946	0	0.027237	-0.3156	-0.024897	-0.035362	-0.6235	-0.85413	-0.55527	-0.36898	-0.37106	-0.61567	-0.16075	-0.55452	0.04557	0.0040545	-0.0071013	1.0546	0.064571	-0.61221	0.078792	-0.25849	-0.43106	-0.34489	-0.6524	-0.25263	0.032212	-0.52803	-0.0034942	-0.37544	-0.77502	-0.59501	-0.69401	0.0059063	-0.5785	-0.26349	-0.10566	-0.90686	-0.66688	-0.11591	0.0025418	-0.92846	-0.02098	-0.53052	0.033581	0.50853	-0.0047482	-0.65887	-1.0406	0.20994	0.44691	0.030086	-0.9469	-0.40068	-0.94288	-0.14916	-0.24043	0.082578	1.8467	-0.62115	-0.8956	-0.62046	-0.4316	-0.48753	-0.91259	-1.0432	0.26349	-0.29259	-1.0044	
Deletion Peak 10 - CN values	9p21.3 	chr9:21964593-22024723(probes 11809:11820)  	chr9:21973950-21998310(probes 11814:11817)  	chr9:20952233-24116907(probes 11732:11896)  	2.412e-52	  2.412e-52		Actual Copy Change Given	-0.49392	-0.67759	-1.193	0.22874	-1.0595	-0.97321	-0.63092	-0.0015652	-1.5	-1.288	0.006868	-1.4334	-0.27627	-0.53619	-1.0428	-0.06853	-0.38973	-0.022697	0.026753	1.5564	-0.19536	-0.41634	-1.5	-0.97685	-0.072668	-1.5	-0.58236	-1.5	-1.5	-0.39073	0.12114	-0.30655	0.29761	-1.5	1.0049	-1.4835	-0.72418	-1.3591	-0.014911	-0.056716	-1.5	-0.55308	1.0366	0.37414	-1.5	-1.5	0.017753	1.3037	0.075485	0.37735	-0.77646	-0.018343	-0.31481	-0.65429	-0.57731	0.017264	0.022281	-0.69098	-0.016469	-0.40474	-0.14591	-1.5	-1.4135	-0.0076407	0.1291	-0.011292	-1.5	0.58423	0.12155	-0.048769	0.90336	-1.5	-1.0664	-0.0042727	0.11095	-1.3911	-0.72503	-0.00020553	-0.64969	-1.008	-0.88285	-0.1614	-0.090066	-1.1612	-1.3939	0.59807	-0.025754	0.042694	-0.010343	-0.96854	-0.80357	-0.68115	-0.84536	0.40665	-0.049495	-0.51908	-0.060011	0.4253	0.18897	-1.5	-0.64884	-0.012869	-1.1448	0.026155	1.0898	-1.2267	-0.016639	-1.497	-1.5	-0.74797	-0.75333	-1.5	
Deletion Peak 11 - CN values	13q14.2	chr13:47328496-51676610(probes 15993:16040)	chr13:48909600-49102445(probes 16015:16020)	chr13:38877301-53419272(probes 15918:16059)	8.0013e-06	 8.0013e-06		Actual Copy Change Given	-0.01141	0.027903	-0.43175	-0.75365	0.93891	-0.010944	-0.47858	-0.0095586	-0.0094978	0.6462	-0.69833	-0.44278	0.10273	-0.013598	-0.41561	-0.56032	-0.02505	0.40432	-0.21087	-0.40249	-0.19248	-0.42208	-0.084103	-0.0011395	-0.32342	0.0059988	0	0.52964	-0.13197	0.15937	0.32754	0.0018371	0.2824	-0.0054719	-1.5	0.71355	-0.37223	-0.012702	-0.040833	-0.49625	-0.12338	-0.030247	-0.58943	-0.60922	-0.90339	-0.05524	-0.32533	0.38198	-0.25895	-0.83803	-0.44717	0.49552	-0.37161	-0.38821	-0.0064884	0.37104	-0.64964	0	-0.017127	0.3149	-1.298	-0.95691	-0.70443	-0.0051626	-0.24212	-0.028856	-0.30239	-0.3418	-0.2734	-0.037091	-1.0287	-0.012129	-0.044522	-0.35079	0.035605	0.60923	-0.56476	-0.0095809	0.19303	-0.28838	-0.43355	-1.4925	1.0602	0.0061623	0.052208	-0.024153	0.48389	-0.11703	-0.54307	0.0037967	0.0091502	-0.16387	-0.77599	-0.092867	-0.31795	-0.074415	0.098285	-0.066024	-0.59357	-0.010414	-0.065015	0.0091289	-1.1627	-0.42307	0.49326	0.37098	-0.058321	0.12936	0.063105	-0.76606	0.25937	0.034526	
Deletion Peak 12 - CN values	15q12  	chr15:1-42987954(probes 17148:17225)       	chr15:25931333-31170354(probes 17163:17175)	chr15:25799958-33071258(probes 17161:17179)	0.043859	   0.043859		Actual Copy Change Given	-0.15571	0.016865	-0.30329	0.0065992	-0.21869	0.014392	-0.52045	0.0033112	0.010652	0.012962	-0.0092802	0.026778	0.0054821	-0.13894	-0.40572	-0.038385	-0.39302	-0.41733	0.021202	-0.018833	0.037608	-0.74199	0.21213	0.018555	0.090469	0.0025729	-0.031505	-0.0085943	0.18747	-0.029322	-0.02739	0.0038553	-0.40097	-0.024574	-0.91432	0.28525	-0.011887	0.45907	-0.43507	-0.5437	0.0080216	-0.00064468	0.32525	-0.64795	-0.008549	-0.029603	-0.3081	0.095805	-0.11398	-0.04292	-0.14106	-0.040717	-0.38388	-0.05735	0.037574	-0.075635	-0.059421	0.092905	-0.021689	0.051439	-0.073968	-0.36871	0.0012127	-0.0020657	-0.17262	0.0045141	-0.057025	-0.041403	-0.11253	-0.030291	-0.54794	0.0085488	-0.35983	-0.37604	-0.018946	-0.0056411	-0.71862	0.025547	-0.2231	-0.0013667	0	0	-0.093206	-0.02918	-0.44946	0.016183	0.034555	-0.95984	0.0103	0.018009	-0.8911	-0.3106	0.12662	0.40743	-0.15891	-0.52068	-0.0023377	-0.053952	-0.14865	0.028031	0.0068222	-0.019049	-0.50954	-0.88091	0.56236	-0.43049	-0.24018	-0.53129	-1.0267	-0.33186	-0.029201	0.43522	
Deletion Peak 13 - CN values	17p12  	chr17:10232869-12759217(probes 18211:18241)	chr17:10869438-11689792(probes 18225:18232)	chr17:10723059-12629620(probes 18221:18239)	0.059527	   0.059527		Actual Copy Change Given	-0.27802	0.017772	-0.091628	1.4234	-0.51036	-0.0010627	-0.5011	0.0059096	-0.90496	-1.3001	0.33138	-0.72029	0.10435	0.18777	-0.44079	-0.63668	-0.40848	0.081502	-0.86501	0.36641	-0.20477	-0.39016	0.045487	-0.56411	-0.29187	-0.9767	0.51869	-0.98958	-0.025908	-0.46907	0.23522	-0.20751	-0.40269	-0.56587	0.066446	-0.03264	-0.067605	-0.4648	0.026559	-0.99481	-0.073334	-0.56379	-0.59377	-1.136	-0.11797	-0.075879	-0.28165	0.44203	-0.13271	-0.42751	-0.23718	-0.58951	-0.089227	-0.38943	-0.65362	-0.14669	-0.63883	-0.28912	0.047326	-0.40909	-0.092022	-0.87615	-0.011542	0.0013336	-0.11045	-0.61534	-0.51323	-0.011613	0.0021671	0.0089342	-0.0017018	0.0043432	-0.36889	-0.44296	-0.32154	-0.031191	-0.73703	-0.47786	0.18533	-0.43807	0.001672	-0.24191	0.44645	-0.62603	-0.46642	-0.63316	0.0059881	-0.99319	-0.0038532	-0.017284	-0.58599	-0.73322	-0.8992	-0.077491	0.015595	-0.53586	0.0035315	-0.074215	-0.30338	-0.24819	-0.059503	0.32039	-0.5708	0.049269	-1.5	-0.45745	0	-0.21459	-0.75587	-0.82716	-0.055552	0.45216	
