
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/13/Correlate_Genomic_Events.R")
> result <- main("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_Correlate_Genomic_Events/broadinstitute.org/cancer.genome.analysis/10441/13/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-tTRUE", "-iD=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/HNSC-TP/6159734/transformed.cor.cli.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/HNSC-TP/6159665/HNSC-TP.transferedmergedcluster.txt", "-fF=", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=0.05", "-cQ=0.25", "-MF=ONLYSIG", "-oT=HNSC-TP", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "terrence_modification_tag"
[1] TRUE
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"         "-oT=HNSC-TP"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/HNSC-TP/6159665/HNSC-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/HNSC-TP/6159734/transformed.cor.cli.txt"

nPatients in clinical file=458, in cluster file=452, common to both=452
[1]  40 452
[1] "1P MUTATION ANALYSIS"
[1] 3
  1P MUTATED 1P WILD-TYPE 
         103          349 
  1P MUTATED 1P WILD-TYPE 
         103          349 
[1] "1Q MUTATION ANALYSIS"
[1] 3
  1Q MUTATED 1Q WILD-TYPE 
         134          318 
  1Q MUTATED 1Q WILD-TYPE 
         134          318 
[1] "2P MUTATION ANALYSIS"
[1] 3
  2P MUTATED 2P WILD-TYPE 
         109          343 
  2P MUTATED 2P WILD-TYPE 
         109          343 
[1] "2Q MUTATION ANALYSIS"
[1] 3
  2Q MUTATED 2Q WILD-TYPE 
         102          350 
  2Q MUTATED 2Q WILD-TYPE 
         102          350 
[1] "3P MUTATION ANALYSIS"
[1] 3
  3P MUTATED 3P WILD-TYPE 
         330          122 
  3P MUTATED 3P WILD-TYPE 
         330          122 
[1] "3Q MUTATION ANALYSIS"
[1] 3
  3Q MUTATED 3Q WILD-TYPE 
         275          177 
  3Q MUTATED 3Q WILD-TYPE 
         275          177 
[1] "4P MUTATION ANALYSIS"
[1] 3
  4P MUTATED 4P WILD-TYPE 
         199          253 
  4P MUTATED 4P WILD-TYPE 
         199          253 
[1] "4Q MUTATION ANALYSIS"
[1] 3
  4Q MUTATED 4Q WILD-TYPE 
         161          291 
  4Q MUTATED 4Q WILD-TYPE 
         161          291 
[1] "5P MUTATION ANALYSIS"
[1] 3
  5P MUTATED 5P WILD-TYPE 
         207          245 
  5P MUTATED 5P WILD-TYPE 
         207          245 
[1] "5Q MUTATION ANALYSIS"
[1] 3
  5Q MUTATED 5Q WILD-TYPE 
         197          255 
  5Q MUTATED 5Q WILD-TYPE 
         197          255 
[1] "6P MUTATION ANALYSIS"
[1] 3
  6P MUTATED 6P WILD-TYPE 
         126          326 
  6P MUTATED 6P WILD-TYPE 
         126          326 
[1] "6Q MUTATION ANALYSIS"
[1] 3
  6Q MUTATED 6Q WILD-TYPE 
         110          342 
  6Q MUTATED 6Q WILD-TYPE 
         110          342 
[1] "7P MUTATION ANALYSIS"
[1] 3
  7P MUTATED 7P WILD-TYPE 
         186          266 
  7P MUTATED 7P WILD-TYPE 
         186          266 
[1] "7Q MUTATION ANALYSIS"
[1] 3
  7Q MUTATED 7Q WILD-TYPE 
         150          302 
  7Q MUTATED 7Q WILD-TYPE 
         150          302 
[1] "8P MUTATION ANALYSIS"
[1] 3
  8P MUTATED 8P WILD-TYPE 
         295          157 
  8P MUTATED 8P WILD-TYPE 
         295          157 
[1] "8Q MUTATION ANALYSIS"
[1] 3
  8Q MUTATED 8Q WILD-TYPE 
         297          155 
  8Q MUTATED 8Q WILD-TYPE 
         297          155 
[1] "9P MUTATION ANALYSIS"
[1] 3
  9P MUTATED 9P WILD-TYPE 
         241          211 
  9P MUTATED 9P WILD-TYPE 
         241          211 
[1] "9Q MUTATION ANALYSIS"
[1] 3
  9Q MUTATED 9Q WILD-TYPE 
         190          262 
  9Q MUTATED 9Q WILD-TYPE 
         190          262 
[1] "10P MUTATION ANALYSIS"
[1] 3
  10P MUTATED 10P WILD-TYPE 
          168           284 
  10P MUTATED 10P WILD-TYPE 
          168           284 
[1] "10Q MUTATION ANALYSIS"
[1] 3
  10Q MUTATED 10Q WILD-TYPE 
          123           329 
  10Q MUTATED 10Q WILD-TYPE 
          123           329 
[1] "11P MUTATION ANALYSIS"
[1] 3
  11P MUTATED 11P WILD-TYPE 
          172           280 
  11P MUTATED 11P WILD-TYPE 
          172           280 
[1] "11Q MUTATION ANALYSIS"
[1] 3
  11Q MUTATED 11Q WILD-TYPE 
          199           253 
  11Q MUTATED 11Q WILD-TYPE 
          199           253 
[1] "12P MUTATION ANALYSIS"
[1] 3
  12P MUTATED 12P WILD-TYPE 
          154           298 
  12P MUTATED 12P WILD-TYPE 
          154           298 
[1] "12Q MUTATION ANALYSIS"
[1] 3
  12Q MUTATED 12Q WILD-TYPE 
          101           351 
  12Q MUTATED 12Q WILD-TYPE 
          101           351 
[1] "13Q MUTATION ANALYSIS"
[1] 3
  13Q MUTATED 13Q WILD-TYPE 
          196           256 
  13Q MUTATED 13Q WILD-TYPE 
          196           256 
[1] "14Q MUTATION ANALYSIS"
[1] 3
  14Q MUTATED 14Q WILD-TYPE 
          175           277 
  14Q MUTATED 14Q WILD-TYPE 
          175           277 
[1] "15Q MUTATION ANALYSIS"
[1] 3
  15Q MUTATED 15Q WILD-TYPE 
          149           303 
  15Q MUTATED 15Q WILD-TYPE 
          149           303 
[1] "16P MUTATION ANALYSIS"
[1] 3
  16P MUTATED 16P WILD-TYPE 
          146           306 
  16P MUTATED 16P WILD-TYPE 
          146           306 
[1] "16Q MUTATION ANALYSIS"
[1] 3
  16Q MUTATED 16Q WILD-TYPE 
          162           290 
  16Q MUTATED 16Q WILD-TYPE 
          162           290 
[1] "17P MUTATION ANALYSIS"
[1] 3
  17P MUTATED 17P WILD-TYPE 
          155           297 
  17P MUTATED 17P WILD-TYPE 
          155           297 
[1] "17Q MUTATION ANALYSIS"
[1] 3
  17Q MUTATED 17Q WILD-TYPE 
          106           346 
  17Q MUTATED 17Q WILD-TYPE 
          106           346 
[1] "18P MUTATION ANALYSIS"
[1] 3
  18P MUTATED 18P WILD-TYPE 
          193           259 
  18P MUTATED 18P WILD-TYPE 
          193           259 
[1] "18Q MUTATION ANALYSIS"
[1] 3
  18Q MUTATED 18Q WILD-TYPE 
          228           224 
  18Q MUTATED 18Q WILD-TYPE 
          228           224 
[1] "19P MUTATION ANALYSIS"
[1] 3
  19P MUTATED 19P WILD-TYPE 
          127           325 
  19P MUTATED 19P WILD-TYPE 
          127           325 
[1] "19Q MUTATION ANALYSIS"
[1] 3
  19Q MUTATED 19Q WILD-TYPE 
          134           318 
  19Q MUTATED 19Q WILD-TYPE 
          134           318 
[1] "20P MUTATION ANALYSIS"
[1] 3
  20P MUTATED 20P WILD-TYPE 
          209           243 
  20P MUTATED 20P WILD-TYPE 
          209           243 
[1] "20Q MUTATION ANALYSIS"
[1] 3
  20Q MUTATED 20Q WILD-TYPE 
          203           249 
  20Q MUTATED 20Q WILD-TYPE 
          203           249 
[1] "21Q MUTATION ANALYSIS"
[1] 3
  21Q MUTATED 21Q WILD-TYPE 
          191           261 
  21Q MUTATED 21Q WILD-TYPE 
          191           261 
[1] "22Q MUTATION ANALYSIS"
[1] 3
  22Q MUTATED 22Q WILD-TYPE 
          162           290 
  22Q MUTATED 22Q WILD-TYPE 
          162           290 
[1] "XQ MUTATION ANALYSIS"
[1] 3
  XQ MUTATED XQ WILD-TYPE 
         143          309 
  XQ MUTATED XQ WILD-TYPE 
         143          309 
[1] "terrence_modification_tag"
[1] TRUE
[1] "data2feature, selection="
 [1] "CN_CNMF"                     "METHLYATION_CNMF"           
 [3] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [5] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [7] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
 [9] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 10 rows and 452 columns.

Variable 1:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=7,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'RPPA_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'RPPA_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MRNASEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MIRSEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'MIRSEQ_MATURE_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 10:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=6,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
 [1] "CN_CNMF"                     "METHLYATION_CNMF"           
 [3] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [5] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [7] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
 [9] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 452 columns, 0 survival variables, and 10 non-survival variables.
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=7, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=4, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=6, binary=FALSE, numeric=FALSE

Clustering(1) Variable = 1P MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  1P MUTATED       77     17      9
  1P WILD-TYPE    148    160     41
D1V1, multiclass
        clus
vv       1P MUTATED 1P WILD-TYPE
  CLUS_1         77          148
  CLUS_2         17          160
  CLUS_3          9           41
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  1P MUTATED       14     24     37      7      8     10      3
  1P WILD-TYPE     53     53     43     58     64     64     14
D1V2, multiclass
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  1P MUTATED       12     20      9     14
  1P WILD-TYPE     41     31     28     51
D1V3, multiclass
        clus
vv       1P MUTATED 1P WILD-TYPE
  CLUS_1         12           41
  CLUS_2         20           31
  CLUS_3          9           28
  CLUS_4         14           51
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  1P MUTATED        4     21     30
  1P WILD-TYPE     12     51     88
D1V4, multiclass
        clus
vv       1P MUTATED 1P WILD-TYPE
  CLUS_1          4           12
  CLUS_2         21           51
  CLUS_3         30           88
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  1P MUTATED       46     30     22
  1P WILD-TYPE    119     92    111
D1V5, multiclass
        clus
vv       1P MUTATED 1P WILD-TYPE
  CLUS_1         46          119
  CLUS_2         30           92
  CLUS_3         22          111
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  1P MUTATED       42     17     39
  1P WILD-TYPE    119     84    119
D1V6, multiclass
        clus
vv       1P MUTATED 1P WILD-TYPE
  CLUS_1         42          119
  CLUS_2         17           84
  CLUS_3         39          119
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  1P MUTATED       26     51     25
  1P WILD-TYPE    114    131    104
D1V7, multiclass
        clus
vv       1P MUTATED 1P WILD-TYPE
  CLUS_1         26          114
  CLUS_2         51          131
  CLUS_3         25          104
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  1P MUTATED        4     42     56
  1P WILD-TYPE     11    131    207
D1V8, multiclass
        clus
vv       1P MUTATED 1P WILD-TYPE
  CLUS_1          4           11
  CLUS_2         42          131
  CLUS_3         56          207
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  1P MUTATED       24     29     23     21
  1P WILD-TYPE     98     73     85     62
D1V9, multiclass
        clus
vv       1P MUTATED 1P WILD-TYPE
  CLUS_1         24           98
  CLUS_2         29           73
  CLUS_3         23           85
  CLUS_4         21           62
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  1P MUTATED        0      9     15      8     35     30
  1P WILD-TYPE      4     31     76     38    120     49
D1V10, multiclass

Clustering(2) Variable = 1Q MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  1Q MUTATED       93     27     14
  1Q WILD-TYPE    132    150     36
D2V1, multiclass
        clus
vv       1Q MUTATED 1Q WILD-TYPE
  CLUS_1         93          132
  CLUS_2         27          150
  CLUS_3         14           36
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  1Q MUTATED       24     30     42     12      9     12      5
  1Q WILD-TYPE     43     47     38     53     63     62     12
D2V2, multiclass
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  1Q MUTATED       14     23     13     20
  1Q WILD-TYPE     39     28     24     45
D2V3, multiclass
        clus
vv       1Q MUTATED 1Q WILD-TYPE
  CLUS_1         14           39
  CLUS_2         23           28
  CLUS_3         13           24
  CLUS_4         20           45
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  1Q MUTATED        6     24     40
  1Q WILD-TYPE     10     48     78
D2V4, multiclass
        clus
vv       1Q MUTATED 1Q WILD-TYPE
  CLUS_1          6           10
  CLUS_2         24           48
  CLUS_3         40           78
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  1Q MUTATED       62     33     30
  1Q WILD-TYPE    103     89    103
D2V5, multiclass
        clus
vv       1Q MUTATED 1Q WILD-TYPE
  CLUS_1         62          103
  CLUS_2         33           89
  CLUS_3         30          103
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  1Q MUTATED       60     21     44
  1Q WILD-TYPE    101     80    114
D2V6, multiclass
        clus
vv       1Q MUTATED 1Q WILD-TYPE
  CLUS_1         60          101
  CLUS_2         21           80
  CLUS_3         44          114
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  1Q MUTATED       35     67     32
  1Q WILD-TYPE    105    115     97
D2V7, multiclass
        clus
vv       1Q MUTATED 1Q WILD-TYPE
  CLUS_1         35          105
  CLUS_2         67          115
  CLUS_3         32           97
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  1Q MUTATED        6     51     77
  1Q WILD-TYPE      9    122    186
D2V8, multiclass
        clus
vv       1Q MUTATED 1Q WILD-TYPE
  CLUS_1          6            9
  CLUS_2         51          122
  CLUS_3         77          186
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  1Q MUTATED       30     41     28     27
  1Q WILD-TYPE     92     61     80     56
D2V9, multiclass
        clus
vv       1Q MUTATED 1Q WILD-TYPE
  CLUS_1         30           92
  CLUS_2         41           61
  CLUS_3         28           80
  CLUS_4         27           56
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  1Q MUTATED        0     13     20     13     42     38
  1Q WILD-TYPE      4     27     71     33    113     41
D2V10, multiclass

Clustering(3) Variable = 2P MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  2P MUTATED       78     18     13
  2P WILD-TYPE    147    159     37
D3V1, multiclass
        clus
vv       2P MUTATED 2P WILD-TYPE
  CLUS_1         78          147
  CLUS_2         18          159
  CLUS_3         13           37
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  2P MUTATED       26     27     32      9      9      4      2
  2P WILD-TYPE     41     50     48     56     63     70     15
D3V2, multiclass
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  2P MUTATED       13     20     13     15
  2P WILD-TYPE     40     31     24     50
D3V3, multiclass
        clus
vv       2P MUTATED 2P WILD-TYPE
  CLUS_1         13           40
  CLUS_2         20           31
  CLUS_3         13           24
  CLUS_4         15           50
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  2P MUTATED        6     23     32
  2P WILD-TYPE     10     49     86
D3V4, multiclass
        clus
vv       2P MUTATED 2P WILD-TYPE
  CLUS_1          6           10
  CLUS_2         23           49
  CLUS_3         32           86
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  2P MUTATED       45     29     27
  2P WILD-TYPE    120     93    106
D3V5, multiclass
        clus
vv       2P MUTATED 2P WILD-TYPE
  CLUS_1         45          120
  CLUS_2         29           93
  CLUS_3         27          106
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  2P MUTATED       46     20     35
  2P WILD-TYPE    115     81    123
D3V6, multiclass
        clus
vv       2P MUTATED 2P WILD-TYPE
  CLUS_1         46          115
  CLUS_2         20           81
  CLUS_3         35          123
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  2P MUTATED       34     47     27
  2P WILD-TYPE    106    135    102
D3V7, multiclass
        clus
vv       2P MUTATED 2P WILD-TYPE
  CLUS_1         34          106
  CLUS_2         47          135
  CLUS_3         27          102
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  2P MUTATED        6     37     65
  2P WILD-TYPE      9    136    198
D3V8, multiclass
        clus
vv       2P MUTATED 2P WILD-TYPE
  CLUS_1          6            9
  CLUS_2         37          136
  CLUS_3         65          198
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  2P MUTATED       27     29     28     20
  2P WILD-TYPE     95     73     80     63
D3V9, multiclass
        clus
vv       2P MUTATED 2P WILD-TYPE
  CLUS_1         27           95
  CLUS_2         29           73
  CLUS_3         28           80
  CLUS_4         20           63
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  2P MUTATED        1      8     15     11     37     32
  2P WILD-TYPE      3     32     76     35    118     47
D3V10, multiclass

Clustering(4) Variable = 2Q MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  2Q MUTATED       68     24     10
  2Q WILD-TYPE    157    153     40
D4V1, multiclass
        clus
vv       2Q MUTATED 2Q WILD-TYPE
  CLUS_1         68          157
  CLUS_2         24          153
  CLUS_3         10           40
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  2Q MUTATED       24     24     25     12      9      6      2
  2Q WILD-TYPE     43     53     55     53     63     68     15
D4V2, multiclass
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  2Q MUTATED       13     18      7     16
  2Q WILD-TYPE     40     33     30     49
D4V3, multiclass
        clus
vv       2Q MUTATED 2Q WILD-TYPE
  CLUS_1         13           40
  CLUS_2         18           33
  CLUS_3          7           30
  CLUS_4         16           49
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  2Q MUTATED        5     19     30
  2Q WILD-TYPE     11     53     88
D4V4, multiclass
        clus
vv       2Q MUTATED 2Q WILD-TYPE
  CLUS_1          5           11
  CLUS_2         19           53
  CLUS_3         30           88
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  2Q MUTATED       42     29     22
  2Q WILD-TYPE    123     93    111
D4V5, multiclass
        clus
vv       2Q MUTATED 2Q WILD-TYPE
  CLUS_1         42          123
  CLUS_2         29           93
  CLUS_3         22          111
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  2Q MUTATED       43     14     36
  2Q WILD-TYPE    118     87    122
D4V6, multiclass
        clus
vv       2Q MUTATED 2Q WILD-TYPE
  CLUS_1         43          118
  CLUS_2         14           87
  CLUS_3         36          122
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  2Q MUTATED       33     44     24
  2Q WILD-TYPE    107    138    105
D4V7, multiclass
        clus
vv       2Q MUTATED 2Q WILD-TYPE
  CLUS_1         33          107
  CLUS_2         44          138
  CLUS_3         24          105
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  2Q MUTATED        7     38     56
  2Q WILD-TYPE      8    135    207
D4V8, multiclass
        clus
vv       2Q MUTATED 2Q WILD-TYPE
  CLUS_1          7            8
  CLUS_2         38          135
  CLUS_3         56          207
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  2Q MUTATED       27     28     21     20
  2Q WILD-TYPE     95     74     87     63
D4V9, multiclass
        clus
vv       2Q MUTATED 2Q WILD-TYPE
  CLUS_1         27           95
  CLUS_2         28           74
  CLUS_3         21           87
  CLUS_4         20           63
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  2Q MUTATED        1      7     15      8     37     28
  2Q WILD-TYPE      3     33     76     38    118     51
D4V10, multiclass

Clustering(5) Variable = 3P MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  3P MUTATED      212     75     43
  3P WILD-TYPE     13    102      7
D5V1, multiclass
        clus
vv       3P MUTATED 3P WILD-TYPE
  CLUS_1        212           13
  CLUS_2         75          102
  CLUS_3         43            7
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  3P MUTATED       59     69     73     37     31     46     15
  3P WILD-TYPE      8      8      7     28     41     28      2
D5V2, multiclass
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  3P MUTATED       38     43     29     51
  3P WILD-TYPE     15      8      8     14
D5V3, multiclass
        clus
vv       3P MUTATED 3P WILD-TYPE
  CLUS_1         38           15
  CLUS_2         43            8
  CLUS_3         29            8
  CLUS_4         51           14
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  3P MUTATED       13     51     97
  3P WILD-TYPE      3     21     21
D5V4, multiclass
        clus
vv       3P MUTATED 3P WILD-TYPE
  CLUS_1         13            3
  CLUS_2         51           21
  CLUS_3         97           21
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  3P MUTATED      125     97     88
  3P WILD-TYPE     40     25     45
D5V5, multiclass
        clus
vv       3P MUTATED 3P WILD-TYPE
  CLUS_1        125           40
  CLUS_2         97           25
  CLUS_3         88           45
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  3P MUTATED      124     65    121
  3P WILD-TYPE     37     36     37
D5V6, multiclass
        clus
vv       3P MUTATED 3P WILD-TYPE
  CLUS_1        124           37
  CLUS_2         65           36
  CLUS_3        121           37
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  3P MUTATED       88    148     93
  3P WILD-TYPE     52     34     36
D5V7, multiclass
        clus
vv       3P MUTATED 3P WILD-TYPE
  CLUS_1         88           52
  CLUS_2        148           34
  CLUS_3         93           36
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  3P MUTATED        7    132    190
  3P WILD-TYPE      8     41     73
D5V8, multiclass
        clus
vv       3P MUTATED 3P WILD-TYPE
  CLUS_1          7            8
  CLUS_2        132           41
  CLUS_3        190           73
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  3P MUTATED       78     76     78     68
  3P WILD-TYPE     44     26     30     15
D5V9, multiclass
        clus
vv       3P MUTATED 3P WILD-TYPE
  CLUS_1         78           44
  CLUS_2         76           26
  CLUS_3         78           30
  CLUS_4         68           15
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  3P MUTATED        3     30     52     35    112     68
  3P WILD-TYPE      1     10     39     11     43     11
D5V10, multiclass

Clustering(6) Variable = 3Q MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  3Q MUTATED      162     78     35
  3Q WILD-TYPE     63     99     15
D6V1, multiclass
        clus
vv       3Q MUTATED 3Q WILD-TYPE
  CLUS_1        162           63
  CLUS_2         78           99
  CLUS_3         35           15
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  3Q MUTATED       47     57     58     42     25     38      8
  3Q WILD-TYPE     20     20     22     23     47     36      9
D6V2, multiclass
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  3Q MUTATED       37     39     22     39
  3Q WILD-TYPE     16     12     15     26
D6V3, multiclass
        clus
vv       3Q MUTATED 3Q WILD-TYPE
  CLUS_1         37           16
  CLUS_2         39           12
  CLUS_3         22           15
  CLUS_4         39           26
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  3Q MUTATED       12     45     80
  3Q WILD-TYPE      4     27     38
D6V4, multiclass
        clus
vv       3Q MUTATED 3Q WILD-TYPE
  CLUS_1         12            4
  CLUS_2         45           27
  CLUS_3         80           38
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  3Q MUTATED      114     80     65
  3Q WILD-TYPE     51     42     68
D6V5, multiclass
        clus
vv       3Q MUTATED 3Q WILD-TYPE
  CLUS_1        114           51
  CLUS_2         80           42
  CLUS_3         65           68
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  3Q MUTATED      112     48     99
  3Q WILD-TYPE     49     53     59
D6V6, multiclass
        clus
vv       3Q MUTATED 3Q WILD-TYPE
  CLUS_1        112           49
  CLUS_2         48           53
  CLUS_3         99           59
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  3Q MUTATED       73    131     71
  3Q WILD-TYPE     67     51     58
D6V7, multiclass
        clus
vv       3Q MUTATED 3Q WILD-TYPE
  CLUS_1         73           67
  CLUS_2        131           51
  CLUS_3         71           58
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  3Q MUTATED        5    110    160
  3Q WILD-TYPE     10     63    103
D6V8, multiclass
        clus
vv       3Q MUTATED 3Q WILD-TYPE
  CLUS_1          5           10
  CLUS_2        110           63
  CLUS_3        160          103
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  3Q MUTATED       60     64     65     56
  3Q WILD-TYPE     62     38     43     27
D6V9, multiclass
        clus
vv       3Q MUTATED 3Q WILD-TYPE
  CLUS_1         60           62
  CLUS_2         64           38
  CLUS_3         65           43
  CLUS_4         56           27
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  3Q MUTATED        2     22     45     28     91     57
  3Q WILD-TYPE      2     18     46     18     64     22
D6V10, multiclass

Clustering(7) Variable = 4P MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  4P MUTATED      143     36     20
  4P WILD-TYPE     82    141     30
D7V1, multiclass
        clus
vv       4P MUTATED 4P WILD-TYPE
  CLUS_1        143           82
  CLUS_2         36          141
  CLUS_3         20           30
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  4P MUTATED       39     40     59     22     13     15     11
  4P WILD-TYPE     28     37     21     43     59     59      6
D7V2, multiclass
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  4P MUTATED       28     32     16     30
  4P WILD-TYPE     25     19     21     35
D7V3, multiclass
        clus
vv       4P MUTATED 4P WILD-TYPE
  CLUS_1         28           25
  CLUS_2         32           19
  CLUS_3         16           21
  CLUS_4         30           35
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  4P MUTATED        7     40     59
  4P WILD-TYPE      9     32     59
D7V4, multiclass
        clus
vv       4P MUTATED 4P WILD-TYPE
  CLUS_1          7            9
  CLUS_2         40           32
  CLUS_3         59           59
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  4P MUTATED       83     57     46
  4P WILD-TYPE     82     65     87
D7V5, multiclass
        clus
vv       4P MUTATED 4P WILD-TYPE
  CLUS_1         83           82
  CLUS_2         57           65
  CLUS_3         46           87
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  4P MUTATED       84     28     74
  4P WILD-TYPE     77     73     84
D7V6, multiclass
        clus
vv       4P MUTATED 4P WILD-TYPE
  CLUS_1         84           77
  CLUS_2         28           73
  CLUS_3         74           84
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  4P MUTATED       57     90     51
  4P WILD-TYPE     83     92     78
D7V7, multiclass
        clus
vv       4P MUTATED 4P WILD-TYPE
  CLUS_1         57           83
  CLUS_2         90           92
  CLUS_3         51           78
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  4P MUTATED        8     81    109
  4P WILD-TYPE      7     92    154
D7V8, multiclass
        clus
vv       4P MUTATED 4P WILD-TYPE
  CLUS_1          8            7
  CLUS_2         81           92
  CLUS_3        109          154
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  4P MUTATED       41     47     45     43
  4P WILD-TYPE     81     55     63     40
D7V9, multiclass
        clus
vv       4P MUTATED 4P WILD-TYPE
  CLUS_1         41           81
  CLUS_2         47           55
  CLUS_3         45           63
  CLUS_4         43           40
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  4P MUTATED        2     10     24     21     67     52
  4P WILD-TYPE      2     30     67     25     88     27
D7V10, multiclass

Clustering(8) Variable = 4Q MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  4Q MUTATED      112     30     19
  4Q WILD-TYPE    113    147     31
D8V1, multiclass
        clus
vv       4Q MUTATED 4Q WILD-TYPE
  CLUS_1        112          113
  CLUS_2         30          147
  CLUS_3         19           31
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  4Q MUTATED       32     35     47     16     12     14      5
  4Q WILD-TYPE     35     42     33     49     60     60     12
D8V2, multiclass
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  4Q MUTATED       22     25     14     24
  4Q WILD-TYPE     31     26     23     41
D8V3, multiclass
        clus
vv       4Q MUTATED 4Q WILD-TYPE
  CLUS_1         22           31
  CLUS_2         25           26
  CLUS_3         14           23
  CLUS_4         24           41
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  4Q MUTATED        4     31     50
  4Q WILD-TYPE     12     41     68
D8V4, multiclass
        clus
vv       4Q MUTATED 4Q WILD-TYPE
  CLUS_1          4           12
  CLUS_2         31           41
  CLUS_3         50           68
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  4Q MUTATED       66     44     37
  4Q WILD-TYPE     99     78     96
D8V5, multiclass
        clus
vv       4Q MUTATED 4Q WILD-TYPE
  CLUS_1         66           99
  CLUS_2         44           78
  CLUS_3         37           96
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  4Q MUTATED       64     24     59
  4Q WILD-TYPE     97     77     99
D8V6, multiclass
        clus
vv       4Q MUTATED 4Q WILD-TYPE
  CLUS_1         64           97
  CLUS_2         24           77
  CLUS_3         59           99
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  4Q MUTATED       40     77     43
  4Q WILD-TYPE    100    105     86
D8V7, multiclass
        clus
vv       4Q MUTATED 4Q WILD-TYPE
  CLUS_1         40          100
  CLUS_2         77          105
  CLUS_3         43           86
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  4Q MUTATED        5     66     89
  4Q WILD-TYPE     10    107    174
D8V8, multiclass
        clus
vv       4Q MUTATED 4Q WILD-TYPE
  CLUS_1          5           10
  CLUS_2         66          107
  CLUS_3         89          174
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  4Q MUTATED       35     40     39     34
  4Q WILD-TYPE     87     62     69     49
D8V9, multiclass
        clus
vv       4Q MUTATED 4Q WILD-TYPE
  CLUS_1         35           87
  CLUS_2         40           62
  CLUS_3         39           69
  CLUS_4         34           49
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  4Q MUTATED        3      9     20     19     56     41
  4Q WILD-TYPE      1     31     71     27     99     38
D8V10, multiclass

Clustering(9) Variable = 5P MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  5P MUTATED      140     41     26
  5P WILD-TYPE     85    136     24
D9V1, multiclass
        clus
vv       5P MUTATED 5P WILD-TYPE
  CLUS_1        140           85
  CLUS_2         41          136
  CLUS_3         26           24
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  5P MUTATED       40     51     47     24     16     20      9
  5P WILD-TYPE     27     26     33     41     56     54      8
D9V2, multiclass
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  5P MUTATED       24     26     17     28
  5P WILD-TYPE     29     25     20     37
D9V3, multiclass
        clus
vv       5P MUTATED 5P WILD-TYPE
  CLUS_1         24           29
  CLUS_2         26           25
  CLUS_3         17           20
  CLUS_4         28           37
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  5P MUTATED        5     35     55
  5P WILD-TYPE     11     37     63
D9V4, multiclass
        clus
vv       5P MUTATED 5P WILD-TYPE
  CLUS_1          5           11
  CLUS_2         35           37
  CLUS_3         55           63
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  5P MUTATED       82     61     50
  5P WILD-TYPE     83     61     83
D9V5, multiclass
        clus
vv       5P MUTATED 5P WILD-TYPE
  CLUS_1         82           83
  CLUS_2         61           61
  CLUS_3         50           83
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  5P MUTATED       80     40     73
  5P WILD-TYPE     81     61     85
D9V6, multiclass
        clus
vv       5P MUTATED 5P WILD-TYPE
  CLUS_1         80           81
  CLUS_2         40           61
  CLUS_3         73           85
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  5P MUTATED       57     88     61
  5P WILD-TYPE     83     94     68
D9V7, multiclass
        clus
vv       5P MUTATED 5P WILD-TYPE
  CLUS_1         57           83
  CLUS_2         88           94
  CLUS_3         61           68
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  5P MUTATED        6     81    119
  5P WILD-TYPE      9     92    144
D9V8, multiclass
        clus
vv       5P MUTATED 5P WILD-TYPE
  CLUS_1          6            9
  CLUS_2         81           92
  CLUS_3        119          144
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  5P MUTATED       49     52     43     45
  5P WILD-TYPE     73     50     65     38
D9V9, multiclass
        clus
vv       5P MUTATED 5P WILD-TYPE
  CLUS_1         49           73
  CLUS_2         52           50
  CLUS_3         43           65
  CLUS_4         45           38
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  5P MUTATED        2     19     37     19     72     40
  5P WILD-TYPE      2     21     54     27     83     39
D9V10, multiclass

Clustering(10) Variable = 5Q MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  5Q MUTATED      143     33     21
  5Q WILD-TYPE     82    144     29
D10V1, multiclass
        clus
vv       5Q MUTATED 5Q WILD-TYPE
  CLUS_1        143           82
  CLUS_2         33          144
  CLUS_3         21           29
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  5Q MUTATED       45     48     50     19     10     17      8
  5Q WILD-TYPE     22     29     30     46     62     57      9
D10V2, multiclass
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  5Q MUTATED       24     27     13     29
  5Q WILD-TYPE     29     24     24     36
D10V3, multiclass
        clus
vv       5Q MUTATED 5Q WILD-TYPE
  CLUS_1         24           29
  CLUS_2         27           24
  CLUS_3         13           24
  CLUS_4         29           36
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  5Q MUTATED        3     33     57
  5Q WILD-TYPE     13     39     61
D10V4, multiclass
        clus
vv       5Q MUTATED 5Q WILD-TYPE
  CLUS_1          3           13
  CLUS_2         33           39
  CLUS_3         57           61
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  5Q MUTATED       79     55     49
  5Q WILD-TYPE     86     67     84
D10V5, multiclass
        clus
vv       5Q MUTATED 5Q WILD-TYPE
  CLUS_1         79           86
  CLUS_2         55           67
  CLUS_3         49           84
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  5Q MUTATED       85     32     66
  5Q WILD-TYPE     76     69     92
D10V6, multiclass
        clus
vv       5Q MUTATED 5Q WILD-TYPE
  CLUS_1         85           76
  CLUS_2         32           69
  CLUS_3         66           92
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  5Q MUTATED       57     87     52
  5Q WILD-TYPE     83     95     77
D10V7, multiclass
        clus
vv       5Q MUTATED 5Q WILD-TYPE
  CLUS_1         57           83
  CLUS_2         87           95
  CLUS_3         52           77
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  5Q MUTATED        9     75    112
  5Q WILD-TYPE      6     98    151
D10V8, multiclass
        clus
vv       5Q MUTATED 5Q WILD-TYPE
  CLUS_1          9            6
  CLUS_2         75           98
  CLUS_3        112          151
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  5Q MUTATED       50     53     41     37
  5Q WILD-TYPE     72     49     67     46
D10V9, multiclass
        clus
vv       5Q MUTATED 5Q WILD-TYPE
  CLUS_1         50           72
  CLUS_2         53           49
  CLUS_3         41           67
  CLUS_4         37           46
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  5Q MUTATED        2     16     33     20     66     44
  5Q WILD-TYPE      2     24     58     26     89     35
D10V10, multiclass

Clustering(11) Variable = 6P MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  6P MUTATED       82     25     19
  6P WILD-TYPE    143    152     31
D11V1, multiclass
        clus
vv       6P MUTATED 6P WILD-TYPE
  CLUS_1         82          143
  CLUS_2         25          152
  CLUS_3         19           31
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  6P MUTATED       22     31     34     11     11     12      5
  6P WILD-TYPE     45     46     46     54     61     62     12
D11V2, multiclass
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  6P MUTATED       18     20      9     16
  6P WILD-TYPE     35     31     28     49
D11V3, multiclass
        clus
vv       6P MUTATED 6P WILD-TYPE
  CLUS_1         18           35
  CLUS_2         20           31
  CLUS_3          9           28
  CLUS_4         16           49
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  6P MUTATED        7     22     34
  6P WILD-TYPE      9     50     84
D11V4, multiclass
        clus
vv       6P MUTATED 6P WILD-TYPE
  CLUS_1          7            9
  CLUS_2         22           50
  CLUS_3         34           84
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  6P MUTATED       47     36     31
  6P WILD-TYPE    118     86    102
D11V5, multiclass
        clus
vv       6P MUTATED 6P WILD-TYPE
  CLUS_1         47          118
  CLUS_2         36           86
  CLUS_3         31          102
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  6P MUTATED       48     21     45
  6P WILD-TYPE    113     80    113
D11V6, multiclass
        clus
vv       6P MUTATED 6P WILD-TYPE
  CLUS_1         48          113
  CLUS_2         21           80
  CLUS_3         45          113
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  6P MUTATED       37     54     34
  6P WILD-TYPE    103    128     95
D11V7, multiclass
        clus
vv       6P MUTATED 6P WILD-TYPE
  CLUS_1         37          103
  CLUS_2         54          128
  CLUS_3         34           95
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  6P MUTATED        7     48     70
  6P WILD-TYPE      8    125    193
D11V8, multiclass
        clus
vv       6P MUTATED 6P WILD-TYPE
  CLUS_1          7            8
  CLUS_2         48          125
  CLUS_3         70          193
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  6P MUTATED       33     30     25     25
  6P WILD-TYPE     89     72     83     58
D11V9, multiclass
        clus
vv       6P MUTATED 6P WILD-TYPE
  CLUS_1         33           89
  CLUS_2         30           72
  CLUS_3         25           83
  CLUS_4         25           58
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  6P MUTATED        0     11     19     10     40     33
  6P WILD-TYPE      4     29     72     36    115     46
D11V10, multiclass

Clustering(12) Variable = 6Q MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  6Q MUTATED       67     25     18
  6Q WILD-TYPE    158    152     32
D12V1, multiclass
        clus
vv       6Q MUTATED 6Q WILD-TYPE
  CLUS_1         67          158
  CLUS_2         25          152
  CLUS_3         18           32
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  6Q MUTATED       19     24     24     11     16      9      7
  6Q WILD-TYPE     48     53     56     54     56     65     10
D12V2, multiclass
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  6Q MUTATED       15     16      9     13
  6Q WILD-TYPE     38     35     28     52
D12V3, multiclass
        clus
vv       6Q MUTATED 6Q WILD-TYPE
  CLUS_1         15           38
  CLUS_2         16           35
  CLUS_3          9           28
  CLUS_4         13           52
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  6Q MUTATED        4     19     30
  6Q WILD-TYPE     12     53     88
D12V4, multiclass
        clus
vv       6Q MUTATED 6Q WILD-TYPE
  CLUS_1          4           12
  CLUS_2         19           53
  CLUS_3         30           88
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  6Q MUTATED       31     31     37
  6Q WILD-TYPE    134     91     96
D12V5, multiclass
        clus
vv       6Q MUTATED 6Q WILD-TYPE
  CLUS_1         31          134
  CLUS_2         31           91
  CLUS_3         37           96
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  6Q MUTATED       34     27     38
  6Q WILD-TYPE    127     74    120
D12V6, multiclass
        clus
vv       6Q MUTATED 6Q WILD-TYPE
  CLUS_1         34          127
  CLUS_2         27           74
  CLUS_3         38          120
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  6Q MUTATED       38     42     29
  6Q WILD-TYPE    102    140    100
D12V7, multiclass
        clus
vv       6Q MUTATED 6Q WILD-TYPE
  CLUS_1         38          102
  CLUS_2         42          140
  CLUS_3         29          100
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  6Q MUTATED        6     44     59
  6Q WILD-TYPE      9    129    204
D12V8, multiclass
        clus
vv       6Q MUTATED 6Q WILD-TYPE
  CLUS_1          6            9
  CLUS_2         44          129
  CLUS_3         59          204
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  6Q MUTATED       32     24     25     19
  6Q WILD-TYPE     90     78     83     64
D12V9, multiclass
        clus
vv       6Q MUTATED 6Q WILD-TYPE
  CLUS_1         32           90
  CLUS_2         24           78
  CLUS_3         25           83
  CLUS_4         19           64
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  6Q MUTATED        0     11     22     12     35     20
  6Q WILD-TYPE      4     29     69     34    120     59
D12V10, multiclass

Clustering(13) Variable = 7P MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  7P MUTATED      125     38     23
  7P WILD-TYPE    100    139     27
D13V1, multiclass
        clus
vv       7P MUTATED 7P WILD-TYPE
  CLUS_1        125          100
  CLUS_2         38          139
  CLUS_3         23           27
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  7P MUTATED       36     38     51     11     24     20      6
  7P WILD-TYPE     31     39     29     54     48     54     11
D13V2, multiclass
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  7P MUTATED       23     30     17     24
  7P WILD-TYPE     30     21     20     41
D13V3, multiclass
        clus
vv       7P MUTATED 7P WILD-TYPE
  CLUS_1         23           30
  CLUS_2         30           21
  CLUS_3         17           20
  CLUS_4         24           41
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  7P MUTATED        7     35     52
  7P WILD-TYPE      9     37     66
D13V4, multiclass
        clus
vv       7P MUTATED 7P WILD-TYPE
  CLUS_1          7            9
  CLUS_2         35           37
  CLUS_3         52           66
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  7P MUTATED       65     48     59
  7P WILD-TYPE    100     74     74
D13V5, multiclass
        clus
vv       7P MUTATED 7P WILD-TYPE
  CLUS_1         65          100
  CLUS_2         48           74
  CLUS_3         59           74
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  7P MUTATED       68     42     62
  7P WILD-TYPE     93     59     96
D13V6, multiclass
        clus
vv       7P MUTATED 7P WILD-TYPE
  CLUS_1         68           93
  CLUS_2         42           59
  CLUS_3         62           96
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  7P MUTATED       56     83     46
  7P WILD-TYPE     84     99     83
D13V7, multiclass
        clus
vv       7P MUTATED 7P WILD-TYPE
  CLUS_1         56           84
  CLUS_2         83           99
  CLUS_3         46           83
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  7P MUTATED       10     69    106
  7P WILD-TYPE      5    104    157
D13V8, multiclass
        clus
vv       7P MUTATED 7P WILD-TYPE
  CLUS_1         10            5
  CLUS_2         69          104
  CLUS_3        106          157
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  7P MUTATED       47     44     41     38
  7P WILD-TYPE     75     58     67     45
D13V9, multiclass
        clus
vv       7P MUTATED 7P WILD-TYPE
  CLUS_1         47           75
  CLUS_2         44           58
  CLUS_3         41           67
  CLUS_4         38           45
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  7P MUTATED        3     19     28     18     62     40
  7P WILD-TYPE      1     21     63     28     93     39
D13V10, multiclass

Clustering(14) Variable = 7Q MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  7Q MUTATED       99     33     18
  7Q WILD-TYPE    126    144     32
D14V1, multiclass
        clus
vv       7Q MUTATED 7Q WILD-TYPE
  CLUS_1         99          126
  CLUS_2         33          144
  CLUS_3         18           32
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  7Q MUTATED       32     26     45     11     17     15      4
  7Q WILD-TYPE     35     51     35     54     55     59     13
D14V2, multiclass
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  7Q MUTATED       20     28     13     19
  7Q WILD-TYPE     33     23     24     46
D14V3, multiclass
        clus
vv       7Q MUTATED 7Q WILD-TYPE
  CLUS_1         20           33
  CLUS_2         28           23
  CLUS_3         13           24
  CLUS_4         19           46
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  7Q MUTATED        7     28     45
  7Q WILD-TYPE      9     44     73
D14V4, multiclass
        clus
vv       7Q MUTATED 7Q WILD-TYPE
  CLUS_1          7            9
  CLUS_2         28           44
  CLUS_3         45           73
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  7Q MUTATED       60     37     43
  7Q WILD-TYPE    105     85     90
D14V5, multiclass
        clus
vv       7Q MUTATED 7Q WILD-TYPE
  CLUS_1         60          105
  CLUS_2         37           85
  CLUS_3         43           90
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  7Q MUTATED       62     30     48
  7Q WILD-TYPE     99     71    110
D14V6, multiclass
        clus
vv       7Q MUTATED 7Q WILD-TYPE
  CLUS_1         62           99
  CLUS_2         30           71
  CLUS_3         48          110
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  7Q MUTATED       44     70     36
  7Q WILD-TYPE     96    112     93
D14V7, multiclass
        clus
vv       7Q MUTATED 7Q WILD-TYPE
  CLUS_1         44           96
  CLUS_2         70          112
  CLUS_3         36           93
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  7Q MUTATED        7     56     87
  7Q WILD-TYPE      8    117    176
D14V8, multiclass
        clus
vv       7Q MUTATED 7Q WILD-TYPE
  CLUS_1          7            8
  CLUS_2         56          117
  CLUS_3         87          176
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  7Q MUTATED       36     37     29     32
  7Q WILD-TYPE     86     65     79     51
D14V9, multiclass
        clus
vv       7Q MUTATED 7Q WILD-TYPE
  CLUS_1         36           86
  CLUS_2         37           65
  CLUS_3         29           79
  CLUS_4         32           51
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  7Q MUTATED        3     16     23     10     48     34
  7Q WILD-TYPE      1     24     68     36    107     45
D14V10, multiclass

Clustering(15) Variable = 8P MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  8P MUTATED      172     87     36
  8P WILD-TYPE     53     90     14
D15V1, multiclass
        clus
vv       8P MUTATED 8P WILD-TYPE
  CLUS_1        172           53
  CLUS_2         87           90
  CLUS_3         36           14
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  8P MUTATED       45     62     56     32     40     47     13
  8P WILD-TYPE     22     15     24     33     32     27      4
D15V2, multiclass
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  8P MUTATED       34     34     23     44
  8P WILD-TYPE     19     17     14     21
D15V3, multiclass
        clus
vv       8P MUTATED 8P WILD-TYPE
  CLUS_1         34           19
  CLUS_2         34           17
  CLUS_3         23           14
  CLUS_4         44           21
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  8P MUTATED        9     47     79
  8P WILD-TYPE      7     25     39
D15V4, multiclass
        clus
vv       8P MUTATED 8P WILD-TYPE
  CLUS_1          9            7
  CLUS_2         47           25
  CLUS_3         79           39
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  8P MUTATED      105     83     86
  8P WILD-TYPE     60     39     47
D15V5, multiclass
        clus
vv       8P MUTATED 8P WILD-TYPE
  CLUS_1        105           60
  CLUS_2         83           39
  CLUS_3         86           47
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  8P MUTATED      102     62    110
  8P WILD-TYPE     59     39     48
D15V6, multiclass
        clus
vv       8P MUTATED 8P WILD-TYPE
  CLUS_1        102           59
  CLUS_2         62           39
  CLUS_3        110           48
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  8P MUTATED       88    118     88
  8P WILD-TYPE     52     64     41
D15V7, multiclass
        clus
vv       8P MUTATED 8P WILD-TYPE
  CLUS_1         88           52
  CLUS_2        118           64
  CLUS_3         88           41
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  8P MUTATED        8    124    162
  8P WILD-TYPE      7     49    101
D15V8, multiclass
        clus
vv       8P MUTATED 8P WILD-TYPE
  CLUS_1          8            7
  CLUS_2        124           49
  CLUS_3        162          101
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  8P MUTATED       80     63     69     58
  8P WILD-TYPE     42     39     39     25
D15V9, multiclass
        clus
vv       8P MUTATED 8P WILD-TYPE
  CLUS_1         80           42
  CLUS_2         63           39
  CLUS_3         69           39
  CLUS_4         58           25
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  8P MUTATED        2     28     46     32    107     55
  8P WILD-TYPE      2     12     45     14     48     24
D15V10, multiclass

Clustering(16) Variable = 8Q MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  8Q MUTATED      164     95     38
  8Q WILD-TYPE     61     82     12
D16V1, multiclass
        clus
vv       8Q MUTATED 8Q WILD-TYPE
  CLUS_1        164           61
  CLUS_2         95           82
  CLUS_3         38           12
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  8Q MUTATED       43     66     51     32     41     50     14
  8Q WILD-TYPE     24     11     29     33     31     24      3
D16V2, multiclass
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  8Q MUTATED       32     28     25     50
  8Q WILD-TYPE     21     23     12     15
D16V3, multiclass
        clus
vv       8Q MUTATED 8Q WILD-TYPE
  CLUS_1         32           21
  CLUS_2         28           23
  CLUS_3         25           12
  CLUS_4         50           15
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  8Q MUTATED        9     46     80
  8Q WILD-TYPE      7     26     38
D16V4, multiclass
        clus
vv       8Q MUTATED 8Q WILD-TYPE
  CLUS_1          9            7
  CLUS_2         46           26
  CLUS_3         80           38
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  8Q MUTATED      101     89     89
  8Q WILD-TYPE     64     33     44
D16V5, multiclass
        clus
vv       8Q MUTATED 8Q WILD-TYPE
  CLUS_1        101           64
  CLUS_2         89           33
  CLUS_3         89           44
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  8Q MUTATED       99     65    115
  8Q WILD-TYPE     62     36     43
D16V6, multiclass
        clus
vv       8Q MUTATED 8Q WILD-TYPE
  CLUS_1         99           62
  CLUS_2         65           36
  CLUS_3        115           43
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  8Q MUTATED       85    119     92
  8Q WILD-TYPE     55     63     37
D16V7, multiclass
        clus
vv       8Q MUTATED 8Q WILD-TYPE
  CLUS_1         85           55
  CLUS_2        119           63
  CLUS_3         92           37
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  8Q MUTATED        9    127    160
  8Q WILD-TYPE      6     46    103
D16V8, multiclass
        clus
vv       8Q MUTATED 8Q WILD-TYPE
  CLUS_1          9            6
  CLUS_2        127           46
  CLUS_3        160          103
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  8Q MUTATED       81     63     68     60
  8Q WILD-TYPE     41     39     40     23
D16V9, multiclass
        clus
vv       8Q MUTATED 8Q WILD-TYPE
  CLUS_1         81           41
  CLUS_2         63           39
  CLUS_3         68           40
  CLUS_4         60           23
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  8Q MUTATED        2     29     46     34    108     53
  8Q WILD-TYPE      2     11     45     12     47     26
D16V10, multiclass

Clustering(17) Variable = 9P MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  9P MUTATED      154     49     38
  9P WILD-TYPE     71    128     12
D17V1, multiclass
        clus
vv       9P MUTATED 9P WILD-TYPE
  CLUS_1        154           71
  CLUS_2         49          128
  CLUS_3         38           12
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  9P MUTATED       45     44     59     18     38     25     12
  9P WILD-TYPE     22     33     21     47     34     49      5
D17V2, multiclass
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  9P MUTATED       30     33     24     35
  9P WILD-TYPE     23     18     13     30
D17V3, multiclass
        clus
vv       9P MUTATED 9P WILD-TYPE
  CLUS_1         30           23
  CLUS_2         33           18
  CLUS_3         24           13
  CLUS_4         35           30
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  9P MUTATED        9     44     69
  9P WILD-TYPE      7     28     49
D17V4, multiclass
        clus
vv       9P MUTATED 9P WILD-TYPE
  CLUS_1          9            7
  CLUS_2         44           28
  CLUS_3         69           49
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  9P MUTATED       86     62     75
  9P WILD-TYPE     79     60     58
D17V5, multiclass
        clus
vv       9P MUTATED 9P WILD-TYPE
  CLUS_1         86           79
  CLUS_2         62           60
  CLUS_3         75           58
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  9P MUTATED       85     57     81
  9P WILD-TYPE     76     44     77
D17V6, multiclass
        clus
vv       9P MUTATED 9P WILD-TYPE
  CLUS_1         85           76
  CLUS_2         57           44
  CLUS_3         81           77
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  9P MUTATED       78    100     63
  9P WILD-TYPE     62     82     66
D17V7, multiclass
        clus
vv       9P MUTATED 9P WILD-TYPE
  CLUS_1         78           62
  CLUS_2        100           82
  CLUS_3         63           66
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  9P MUTATED       11     88    142
  9P WILD-TYPE      4     85    121
D17V8, multiclass
        clus
vv       9P MUTATED 9P WILD-TYPE
  CLUS_1         11            4
  CLUS_2         88           85
  CLUS_3        142          121
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  9P MUTATED       68     53     56     46
  9P WILD-TYPE     54     49     52     37
D17V9, multiclass
        clus
vv       9P MUTATED 9P WILD-TYPE
  CLUS_1         68           54
  CLUS_2         53           49
  CLUS_3         56           52
  CLUS_4         46           37
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  9P MUTATED        3     23     40     26     78     53
  9P WILD-TYPE      1     17     51     20     77     26
D17V10, multiclass

Clustering(18) Variable = 9Q MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  9Q MUTATED      106     44     40
  9Q WILD-TYPE    119    133     10
D18V1, multiclass
        clus
vv       9Q MUTATED 9Q WILD-TYPE
  CLUS_1        106          119
  CLUS_2         44          133
  CLUS_3         40           10
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  9Q MUTATED       32     33     44     18     35     20      8
  9Q WILD-TYPE     35     44     36     47     37     54      9
D18V2, multiclass
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  9Q MUTATED       25     25     22     26
  9Q WILD-TYPE     28     26     15     39
D18V3, multiclass
        clus
vv       9Q MUTATED 9Q WILD-TYPE
  CLUS_1         25           28
  CLUS_2         25           26
  CLUS_3         22           15
  CLUS_4         26           39
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  9Q MUTATED        8     40     50
  9Q WILD-TYPE      8     32     68
D18V4, multiclass
        clus
vv       9Q MUTATED 9Q WILD-TYPE
  CLUS_1          8            8
  CLUS_2         40           32
  CLUS_3         50           68
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  9Q MUTATED       64     53     59
  9Q WILD-TYPE    101     69     74
D18V5, multiclass
        clus
vv       9Q MUTATED 9Q WILD-TYPE
  CLUS_1         64          101
  CLUS_2         53           69
  CLUS_3         59           74
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  9Q MUTATED       60     48     68
  9Q WILD-TYPE    101     53     90
D18V6, multiclass
        clus
vv       9Q MUTATED 9Q WILD-TYPE
  CLUS_1         60          101
  CLUS_2         48           53
  CLUS_3         68           90
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  9Q MUTATED       61     76     53
  9Q WILD-TYPE     79    106     76
D18V7, multiclass
        clus
vv       9Q MUTATED 9Q WILD-TYPE
  CLUS_1         61           79
  CLUS_2         76          106
  CLUS_3         53           76
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  9Q MUTATED        9     73    108
  9Q WILD-TYPE      6    100    155
D18V8, multiclass
        clus
vv       9Q MUTATED 9Q WILD-TYPE
  CLUS_1          9            6
  CLUS_2         73          100
  CLUS_3        108          155
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  9Q MUTATED       56     37     47     39
  9Q WILD-TYPE     66     65     61     44
D18V9, multiclass
        clus
vv       9Q MUTATED 9Q WILD-TYPE
  CLUS_1         56           66
  CLUS_2         37           65
  CLUS_3         47           61
  CLUS_4         39           44
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  9Q MUTATED        3     19     30     25     64     38
  9Q WILD-TYPE      1     21     61     21     91     41
D18V10, multiclass

Clustering(19) Variable = 10P MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  10P MUTATED      109     38     21
  10P WILD-TYPE    116    139     29
D19V1, multiclass
        clus
vv       10P MUTATED 10P WILD-TYPE
  CLUS_1         109           116
  CLUS_2          38           139
  CLUS_3          21            29
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  10P MUTATED       36     36     36     17     22     13      8
  10P WILD-TYPE     31     41     44     48     50     61      9
D19V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  10P MUTATED       23     20     19     21
  10P WILD-TYPE     30     31     18     44
D19V3, multiclass
        clus
vv       10P MUTATED 10P WILD-TYPE
  CLUS_1          23            30
  CLUS_2          20            31
  CLUS_3          19            18
  CLUS_4          21            44
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  10P MUTATED        5     34     44
  10P WILD-TYPE     11     38     74
D19V4, multiclass
        clus
vv       10P MUTATED 10P WILD-TYPE
  CLUS_1           5            11
  CLUS_2          34            38
  CLUS_3          44            74
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  10P MUTATED       63     46     45
  10P WILD-TYPE    102     76     88
D19V5, multiclass
        clus
vv       10P MUTATED 10P WILD-TYPE
  CLUS_1          63           102
  CLUS_2          46            76
  CLUS_3          45            88
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  10P MUTATED       66     29     59
  10P WILD-TYPE     95     72     99
D19V6, multiclass
        clus
vv       10P MUTATED 10P WILD-TYPE
  CLUS_1          66            95
  CLUS_2          29            72
  CLUS_3          59            99
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  10P MUTATED       44     76     47
  10P WILD-TYPE     96    106     82
D19V7, multiclass
        clus
vv       10P MUTATED 10P WILD-TYPE
  CLUS_1          44            96
  CLUS_2          76           106
  CLUS_3          47            82
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  10P MUTATED        2     65    100
  10P WILD-TYPE     13    108    163
D19V8, multiclass
        clus
vv       10P MUTATED 10P WILD-TYPE
  CLUS_1           2            13
  CLUS_2          65           108
  CLUS_3         100           163
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  10P MUTATED       37     44     43     31
  10P WILD-TYPE     85     58     65     52
D19V9, multiclass
        clus
vv       10P MUTATED 10P WILD-TYPE
  CLUS_1          37            85
  CLUS_2          44            58
  CLUS_3          43            65
  CLUS_4          31            52
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  10P MUTATED        0     19     25     24     55     32
  10P WILD-TYPE      4     21     66     22    100     47
D19V10, multiclass

Clustering(20) Variable = 10Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  10Q MUTATED       85     25     13
  10Q WILD-TYPE    140    152     37
D20V1, multiclass
        clus
vv       10Q MUTATED 10Q WILD-TYPE
  CLUS_1          85           140
  CLUS_2          25           152
  CLUS_3          13            37
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  10Q MUTATED       23     27     33     15     12      7      6
  10Q WILD-TYPE     44     50     47     50     60     67     11
D20V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  10Q MUTATED       16     21     13     12
  10Q WILD-TYPE     37     30     24     53
D20V3, multiclass
        clus
vv       10Q MUTATED 10Q WILD-TYPE
  CLUS_1          16            37
  CLUS_2          21            30
  CLUS_3          13            24
  CLUS_4          12            53
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  10Q MUTATED        6     27     29
  10Q WILD-TYPE     10     45     89
D20V4, multiclass
        clus
vv       10Q MUTATED 10Q WILD-TYPE
  CLUS_1           6            10
  CLUS_2          27            45
  CLUS_3          29            89
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  10Q MUTATED       48     36     27
  10Q WILD-TYPE    117     86    106
D20V5, multiclass
        clus
vv       10Q MUTATED 10Q WILD-TYPE
  CLUS_1          48           117
  CLUS_2          36            86
  CLUS_3          27           106
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  10Q MUTATED       51     15     45
  10Q WILD-TYPE    110     86    113
D20V6, multiclass
        clus
vv       10Q MUTATED 10Q WILD-TYPE
  CLUS_1          51           110
  CLUS_2          15            86
  CLUS_3          45           113
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  10Q MUTATED       34     55     33
  10Q WILD-TYPE    106    127     96
D20V7, multiclass
        clus
vv       10Q MUTATED 10Q WILD-TYPE
  CLUS_1          34           106
  CLUS_2          55           127
  CLUS_3          33            96
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  10Q MUTATED        4     52     66
  10Q WILD-TYPE     11    121    197
D20V8, multiclass
        clus
vv       10Q MUTATED 10Q WILD-TYPE
  CLUS_1           4            11
  CLUS_2          52           121
  CLUS_3          66           197
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  10Q MUTATED       26     37     27     23
  10Q WILD-TYPE     96     65     81     60
D20V9, multiclass
        clus
vv       10Q MUTATED 10Q WILD-TYPE
  CLUS_1          26            96
  CLUS_2          37            65
  CLUS_3          27            81
  CLUS_4          23            60
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  10Q MUTATED        0     10     16     12     45     30
  10Q WILD-TYPE      4     30     75     34    110     49
D20V10, multiclass

Clustering(21) Variable = 11P MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  11P MUTATED      114     41     17
  11P WILD-TYPE    111    136     33
D21V1, multiclass
        clus
vv       11P MUTATED 11P WILD-TYPE
  CLUS_1         114           111
  CLUS_2          41           136
  CLUS_3          17            33
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  11P MUTATED       22     35     45     24     17     19     10
  11P WILD-TYPE     45     42     35     41     55     55      7
D21V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  11P MUTATED       22     23     14     21
  11P WILD-TYPE     31     28     23     44
D21V3, multiclass
        clus
vv       11P MUTATED 11P WILD-TYPE
  CLUS_1          22            31
  CLUS_2          23            28
  CLUS_3          14            23
  CLUS_4          21            44
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  11P MUTATED        7     29     44
  11P WILD-TYPE      9     43     74
D21V4, multiclass
        clus
vv       11P MUTATED 11P WILD-TYPE
  CLUS_1           7             9
  CLUS_2          29            43
  CLUS_3          44            74
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  11P MUTATED       72     45     42
  11P WILD-TYPE     93     77     91
D21V5, multiclass
        clus
vv       11P MUTATED 11P WILD-TYPE
  CLUS_1          72            93
  CLUS_2          45            77
  CLUS_3          42            91
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  11P MUTATED       66     36     57
  11P WILD-TYPE     95     65    101
D21V6, multiclass
        clus
vv       11P MUTATED 11P WILD-TYPE
  CLUS_1          66            95
  CLUS_2          36            65
  CLUS_3          57           101
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  11P MUTATED       48     79     44
  11P WILD-TYPE     92    103     85
D21V7, multiclass
        clus
vv       11P MUTATED 11P WILD-TYPE
  CLUS_1          48            92
  CLUS_2          79           103
  CLUS_3          44            85
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  11P MUTATED        5     66    100
  11P WILD-TYPE     10    107    163
D21V8, multiclass
        clus
vv       11P MUTATED 11P WILD-TYPE
  CLUS_1           5            10
  CLUS_2          66           107
  CLUS_3         100           163
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  11P MUTATED       44     39     47     25
  11P WILD-TYPE     78     63     61     58
D21V9, multiclass
        clus
vv       11P MUTATED 11P WILD-TYPE
  CLUS_1          44            78
  CLUS_2          39            63
  CLUS_3          47            61
  CLUS_4          25            58
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  11P MUTATED        1     16     31     15     55     37
  11P WILD-TYPE      3     24     60     31    100     42
D21V10, multiclass

Clustering(22) Variable = 11Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  11Q MUTATED      126     53     20
  11Q WILD-TYPE     99    124     30
D22V1, multiclass
        clus
vv       11Q MUTATED 11Q WILD-TYPE
  CLUS_1         126            99
  CLUS_2          53           124
  CLUS_3          20            30
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  11Q MUTATED       24     41     45     37     21     20     11
  11Q WILD-TYPE     43     36     35     28     51     54      6
D22V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  11Q MUTATED       26     27     13     27
  11Q WILD-TYPE     27     24     24     38
D22V3, multiclass
        clus
vv       11Q MUTATED 11Q WILD-TYPE
  CLUS_1          26            27
  CLUS_2          27            24
  CLUS_3          13            24
  CLUS_4          27            38
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  11Q MUTATED        8     35     50
  11Q WILD-TYPE      8     37     68
D22V4, multiclass
        clus
vv       11Q MUTATED 11Q WILD-TYPE
  CLUS_1           8             8
  CLUS_2          35            37
  CLUS_3          50            68
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  11Q MUTATED       82     50     51
  11Q WILD-TYPE     83     72     82
D22V5, multiclass
        clus
vv       11Q MUTATED 11Q WILD-TYPE
  CLUS_1          82            83
  CLUS_2          50            72
  CLUS_3          51            82
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  11Q MUTATED       75     43     65
  11Q WILD-TYPE     86     58     93
D22V6, multiclass
        clus
vv       11Q MUTATED 11Q WILD-TYPE
  CLUS_1          75            86
  CLUS_2          43            58
  CLUS_3          65            93
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  11Q MUTATED       63     83     52
  11Q WILD-TYPE     77     99     77
D22V7, multiclass
        clus
vv       11Q MUTATED 11Q WILD-TYPE
  CLUS_1          63            77
  CLUS_2          83            99
  CLUS_3          52            77
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  11Q MUTATED        6     74    118
  11Q WILD-TYPE      9     99    145
D22V8, multiclass
        clus
vv       11Q MUTATED 11Q WILD-TYPE
  CLUS_1           6             9
  CLUS_2          74            99
  CLUS_3         118           145
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  11Q MUTATED       48     44     54     32
  11Q WILD-TYPE     74     58     54     51
D22V9, multiclass
        clus
vv       11Q MUTATED 11Q WILD-TYPE
  CLUS_1          48            74
  CLUS_2          44            58
  CLUS_3          54            54
  CLUS_4          32            51
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  11Q MUTATED        1     21     37     19     64     36
  11Q WILD-TYPE      3     19     54     27     91     43
D22V10, multiclass

Clustering(23) Variable = 12P MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  12P MUTATED      104     32     18
  12P WILD-TYPE    121    145     32
D23V1, multiclass
        clus
vv       12P MUTATED 12P WILD-TYPE
  CLUS_1         104           121
  CLUS_2          32           145
  CLUS_3          18            32
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  12P MUTATED       32     30     39     23     11     13      6
  12P WILD-TYPE     35     47     41     42     61     61     11
D23V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  12P MUTATED       23     25     13     15
  12P WILD-TYPE     30     26     24     50
D23V3, multiclass
        clus
vv       12P MUTATED 12P WILD-TYPE
  CLUS_1          23            30
  CLUS_2          25            26
  CLUS_3          13            24
  CLUS_4          15            50
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  12P MUTATED        8     30     38
  12P WILD-TYPE      8     42     80
D23V4, multiclass
        clus
vv       12P MUTATED 12P WILD-TYPE
  CLUS_1           8             8
  CLUS_2          30            42
  CLUS_3          38            80
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  12P MUTATED       70     41     34
  12P WILD-TYPE     95     81     99
D23V5, multiclass
        clus
vv       12P MUTATED 12P WILD-TYPE
  CLUS_1          70            95
  CLUS_2          41            81
  CLUS_3          34            99
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  12P MUTATED       70     25     50
  12P WILD-TYPE     91     76    108
D23V6, multiclass
        clus
vv       12P MUTATED 12P WILD-TYPE
  CLUS_1          70            91
  CLUS_2          25            76
  CLUS_3          50           108
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  12P MUTATED       46     71     37
  12P WILD-TYPE     94    111     92
D23V7, multiclass
        clus
vv       12P MUTATED 12P WILD-TYPE
  CLUS_1          46            94
  CLUS_2          71           111
  CLUS_3          37            92
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  12P MUTATED        7     56     91
  12P WILD-TYPE      8    117    172
D23V8, multiclass
        clus
vv       12P MUTATED 12P WILD-TYPE
  CLUS_1           7             8
  CLUS_2          56           117
  CLUS_3          91           172
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  12P MUTATED       31     42     35     32
  12P WILD-TYPE     91     60     73     51
D23V9, multiclass
        clus
vv       12P MUTATED 12P WILD-TYPE
  CLUS_1          31            91
  CLUS_2          42            60
  CLUS_3          35            73
  CLUS_4          32            51
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  12P MUTATED        1     12     24     16     48     39
  12P WILD-TYPE      3     28     67     30    107     40
D23V10, multiclass

Clustering(24) Variable = 12Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  12Q MUTATED       69     19     13
  12Q WILD-TYPE    156    158     37
D24V1, multiclass
        clus
vv       12Q MUTATED 12Q WILD-TYPE
  CLUS_1          69           156
  CLUS_2          19           158
  CLUS_3          13            37
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  12Q MUTATED       23     22     25     16      5      6      4
  12Q WILD-TYPE     44     55     55     49     67     68     13
D24V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  12Q MUTATED       16     19      8     11
  12Q WILD-TYPE     37     32     29     54
D24V3, multiclass
        clus
vv       12Q MUTATED 12Q WILD-TYPE
  CLUS_1          16            37
  CLUS_2          19            32
  CLUS_3           8            29
  CLUS_4          11            54
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  12Q MUTATED        7     22     25
  12Q WILD-TYPE      9     50     93
D24V4, multiclass
        clus
vv       12Q MUTATED 12Q WILD-TYPE
  CLUS_1           7             9
  CLUS_2          22            50
  CLUS_3          25            93
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  12Q MUTATED       44     25     23
  12Q WILD-TYPE    121     97    110
D24V5, multiclass
        clus
vv       12Q MUTATED 12Q WILD-TYPE
  CLUS_1          44           121
  CLUS_2          25            97
  CLUS_3          23           110
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  12Q MUTATED       45     16     31
  12Q WILD-TYPE    116     85    127
D24V6, multiclass
        clus
vv       12Q MUTATED 12Q WILD-TYPE
  CLUS_1          45           116
  CLUS_2          16            85
  CLUS_3          31           127
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  12Q MUTATED       37     39     25
  12Q WILD-TYPE    103    143    104
D24V7, multiclass
        clus
vv       12Q MUTATED 12Q WILD-TYPE
  CLUS_1          37           103
  CLUS_2          39           143
  CLUS_3          25           104
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  12Q MUTATED        4     37     60
  12Q WILD-TYPE     11    136    203
D24V8, multiclass
        clus
vv       12Q MUTATED 12Q WILD-TYPE
  CLUS_1           4            11
  CLUS_2          37           136
  CLUS_3          60           203
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  12Q MUTATED       23     29     24     14
  12Q WILD-TYPE     99     73     84     69
D24V9, multiclass
        clus
vv       12Q MUTATED 12Q WILD-TYPE
  CLUS_1          23            99
  CLUS_2          29            73
  CLUS_3          24            84
  CLUS_4          14            69
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  12Q MUTATED        0      7     20      9     30     24
  12Q WILD-TYPE      4     33     71     37    125     55
D24V10, multiclass

Clustering(25) Variable = 13Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  13Q MUTATED      131     44     21
  13Q WILD-TYPE     94    133     29
D25V1, multiclass
        clus
vv       13Q MUTATED 13Q WILD-TYPE
  CLUS_1         131            94
  CLUS_2          44           133
  CLUS_3          21            29
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  13Q MUTATED       44     42     46     23     13     21      7
  13Q WILD-TYPE     23     35     34     42     59     53     10
D25V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  13Q MUTATED       23     28     13     27
  13Q WILD-TYPE     30     23     24     38
D25V3, multiclass
        clus
vv       13Q MUTATED 13Q WILD-TYPE
  CLUS_1          23            30
  CLUS_2          28            23
  CLUS_3          13            24
  CLUS_4          27            38
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  13Q MUTATED        9     30     52
  13Q WILD-TYPE      7     42     66
D25V4, multiclass
        clus
vv       13Q MUTATED 13Q WILD-TYPE
  CLUS_1           9             7
  CLUS_2          30            42
  CLUS_3          52            66
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  13Q MUTATED       76     61     47
  13Q WILD-TYPE     89     61     86
D25V5, multiclass
        clus
vv       13Q MUTATED 13Q WILD-TYPE
  CLUS_1          76            89
  CLUS_2          61            61
  CLUS_3          47            86
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  13Q MUTATED       79     30     75
  13Q WILD-TYPE     82     71     83
D25V6, multiclass
        clus
vv       13Q MUTATED 13Q WILD-TYPE
  CLUS_1          79            82
  CLUS_2          30            71
  CLUS_3          75            83
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  13Q MUTATED       55     88     52
  13Q WILD-TYPE     85     94     77
D25V7, multiclass
        clus
vv       13Q MUTATED 13Q WILD-TYPE
  CLUS_1          55            85
  CLUS_2          88            94
  CLUS_3          52            77
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  13Q MUTATED        9     77    109
  13Q WILD-TYPE      6     96    154
D25V8, multiclass
        clus
vv       13Q MUTATED 13Q WILD-TYPE
  CLUS_1           9             6
  CLUS_2          77            96
  CLUS_3         109           154
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  13Q MUTATED       46     49     42     41
  13Q WILD-TYPE     76     53     66     42
D25V9, multiclass
        clus
vv       13Q MUTATED 13Q WILD-TYPE
  CLUS_1          46            76
  CLUS_2          49            53
  CLUS_3          42            66
  CLUS_4          41            42
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  13Q MUTATED        1     15     30     21     66     45
  13Q WILD-TYPE      3     25     61     25     89     34
D25V10, multiclass

Clustering(26) Variable = 14Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  14Q MUTATED      111     41     23
  14Q WILD-TYPE    114    136     27
D26V1, multiclass
        clus
vv       14Q MUTATED 14Q WILD-TYPE
  CLUS_1         111           114
  CLUS_2          41           136
  CLUS_3          23            27
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  14Q MUTATED       32     37     44     14     21     20      7
  14Q WILD-TYPE     35     40     36     51     51     54     10
D26V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  14Q MUTATED       20     24     18     25
  14Q WILD-TYPE     33     27     19     40
D26V3, multiclass
        clus
vv       14Q MUTATED 14Q WILD-TYPE
  CLUS_1          20            33
  CLUS_2          24            27
  CLUS_3          18            19
  CLUS_4          25            40
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  14Q MUTATED        6     31     50
  14Q WILD-TYPE     10     41     68
D26V4, multiclass
        clus
vv       14Q MUTATED 14Q WILD-TYPE
  CLUS_1           6            10
  CLUS_2          31            41
  CLUS_3          50            68
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  14Q MUTATED       62     51     48
  14Q WILD-TYPE    103     71     85
D26V5, multiclass
        clus
vv       14Q MUTATED 14Q WILD-TYPE
  CLUS_1          62           103
  CLUS_2          51            71
  CLUS_3          48            85
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  14Q MUTATED       61     34     66
  14Q WILD-TYPE    100     67     92
D26V6, multiclass
        clus
vv       14Q MUTATED 14Q WILD-TYPE
  CLUS_1          61           100
  CLUS_2          34            67
  CLUS_3          66            92
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  14Q MUTATED       49     69     56
  14Q WILD-TYPE     91    113     73
D26V7, multiclass
        clus
vv       14Q MUTATED 14Q WILD-TYPE
  CLUS_1          49            91
  CLUS_2          69           113
  CLUS_3          56            73
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  14Q MUTATED       11     72     91
  14Q WILD-TYPE      4    101    172
D26V8, multiclass
        clus
vv       14Q MUTATED 14Q WILD-TYPE
  CLUS_1          11             4
  CLUS_2          72           101
  CLUS_3          91           172
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  14Q MUTATED       45     41     42     38
  14Q WILD-TYPE     77     61     66     45
D26V9, multiclass
        clus
vv       14Q MUTATED 14Q WILD-TYPE
  CLUS_1          45            77
  CLUS_2          41            61
  CLUS_3          42            66
  CLUS_4          38            45
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  14Q MUTATED        3     18     22     19     66     38
  14Q WILD-TYPE      1     22     69     27     89     41
D26V10, multiclass

Clustering(27) Variable = 15Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  15Q MUTATED       99     28     22
  15Q WILD-TYPE    126    149     28
D27V1, multiclass
        clus
vv       15Q MUTATED 15Q WILD-TYPE
  CLUS_1          99           126
  CLUS_2          28           149
  CLUS_3          22            28
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  15Q MUTATED       28     34     31     10     23     16      7
  15Q WILD-TYPE     39     43     49     55     49     58     10
D27V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  15Q MUTATED       17     25     14     25
  15Q WILD-TYPE     36     26     23     40
D27V3, multiclass
        clus
vv       15Q MUTATED 15Q WILD-TYPE
  CLUS_1          17            36
  CLUS_2          25            26
  CLUS_3          14            23
  CLUS_4          25            40
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  15Q MUTATED        6     24     51
  15Q WILD-TYPE     10     48     67
D27V4, multiclass
        clus
vv       15Q MUTATED 15Q WILD-TYPE
  CLUS_1           6            10
  CLUS_2          24            48
  CLUS_3          51            67
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  15Q MUTATED       47     48     44
  15Q WILD-TYPE    118     74     89
D27V5, multiclass
        clus
vv       15Q MUTATED 15Q WILD-TYPE
  CLUS_1          47           118
  CLUS_2          48            74
  CLUS_3          44            89
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  15Q MUTATED       54     30     55
  15Q WILD-TYPE    107     71    103
D27V6, multiclass
        clus
vv       15Q MUTATED 15Q WILD-TYPE
  CLUS_1          54           107
  CLUS_2          30            71
  CLUS_3          55           103
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  15Q MUTATED       50     58     41
  15Q WILD-TYPE     90    124     88
D27V7, multiclass
        clus
vv       15Q MUTATED 15Q WILD-TYPE
  CLUS_1          50            90
  CLUS_2          58           124
  CLUS_3          41            88
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  15Q MUTATED        6     61     82
  15Q WILD-TYPE      9    112    181
D27V8, multiclass
        clus
vv       15Q MUTATED 15Q WILD-TYPE
  CLUS_1           6             9
  CLUS_2          61           112
  CLUS_3          82           181
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  15Q MUTATED       43     32     36     25
  15Q WILD-TYPE     79     70     72     58
D27V9, multiclass
        clus
vv       15Q MUTATED 15Q WILD-TYPE
  CLUS_1          43            79
  CLUS_2          32            70
  CLUS_3          36            72
  CLUS_4          25            58
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  15Q MUTATED        1     17     22     15     53     28
  15Q WILD-TYPE      3     23     69     31    102     51
D27V10, multiclass

Clustering(28) Variable = 16P MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  16P MUTATED       97     28     21
  16P WILD-TYPE    128    149     29
D28V1, multiclass
        clus
vv       16P MUTATED 16P WILD-TYPE
  CLUS_1          97           128
  CLUS_2          28           149
  CLUS_3          21            29
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  16P MUTATED       33     31     34     15      9     15      9
  16P WILD-TYPE     34     46     46     50     63     59      8
D28V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  16P MUTATED       14     20     12     18
  16P WILD-TYPE     39     31     25     47
D28V3, multiclass
        clus
vv       16P MUTATED 16P WILD-TYPE
  CLUS_1          14            39
  CLUS_2          20            31
  CLUS_3          12            25
  CLUS_4          18            47
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  16P MUTATED        6     22     36
  16P WILD-TYPE     10     50     82
D28V4, multiclass
        clus
vv       16P MUTATED 16P WILD-TYPE
  CLUS_1           6            10
  CLUS_2          22            50
  CLUS_3          36            82
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  16P MUTATED       56     41     41
  16P WILD-TYPE    109     81     92
D28V5, multiclass
        clus
vv       16P MUTATED 16P WILD-TYPE
  CLUS_1          56           109
  CLUS_2          41            81
  CLUS_3          41            92
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  16P MUTATED       58     27     53
  16P WILD-TYPE    103     74    105
D28V6, multiclass
        clus
vv       16P MUTATED 16P WILD-TYPE
  CLUS_1          58           103
  CLUS_2          27            74
  CLUS_3          53           105
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  16P MUTATED       42     62     41
  16P WILD-TYPE     98    120     88
D28V7, multiclass
        clus
vv       16P MUTATED 16P WILD-TYPE
  CLUS_1          42            98
  CLUS_2          62           120
  CLUS_3          41            88
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  16P MUTATED        8     59     78
  16P WILD-TYPE      7    114    185
D28V8, multiclass
        clus
vv       16P MUTATED 16P WILD-TYPE
  CLUS_1           8             7
  CLUS_2          59           114
  CLUS_3          78           185
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  16P MUTATED       36     37     33     30
  16P WILD-TYPE     86     65     75     53
D28V9, multiclass
        clus
vv       16P MUTATED 16P WILD-TYPE
  CLUS_1          36            86
  CLUS_2          37            65
  CLUS_3          33            75
  CLUS_4          30            53
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  16P MUTATED        2      8     27     11     54     34
  16P WILD-TYPE      2     32     64     35    101     45
D28V10, multiclass

Clustering(29) Variable = 16Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  16Q MUTATED      100     41     21
  16Q WILD-TYPE    125    136     29
D29V1, multiclass
        clus
vv       16Q MUTATED 16Q WILD-TYPE
  CLUS_1         100           125
  CLUS_2          41           136
  CLUS_3          21            29
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  16Q MUTATED       31     30     39     30      9     15      8
  16Q WILD-TYPE     36     47     41     35     63     59      9
D29V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  16Q MUTATED       15     22     16     22
  16Q WILD-TYPE     38     29     21     43
D29V3, multiclass
        clus
vv       16Q MUTATED 16Q WILD-TYPE
  CLUS_1          15            38
  CLUS_2          22            29
  CLUS_3          16            21
  CLUS_4          22            43
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  16Q MUTATED        9     25     41
  16Q WILD-TYPE      7     47     77
D29V4, multiclass
        clus
vv       16Q MUTATED 16Q WILD-TYPE
  CLUS_1           9             7
  CLUS_2          25            47
  CLUS_3          41            77
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  16Q MUTATED       73     44     37
  16Q WILD-TYPE     92     78     96
D29V5, multiclass
        clus
vv       16Q MUTATED 16Q WILD-TYPE
  CLUS_1          73            92
  CLUS_2          44            78
  CLUS_3          37            96
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  16Q MUTATED       75     25     54
  16Q WILD-TYPE     86     76    104
D29V6, multiclass
        clus
vv       16Q MUTATED 16Q WILD-TYPE
  CLUS_1          75            86
  CLUS_2          25            76
  CLUS_3          54           104
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  16Q MUTATED       42     75     44
  16Q WILD-TYPE     98    107     85
D29V7, multiclass
        clus
vv       16Q MUTATED 16Q WILD-TYPE
  CLUS_1          42            98
  CLUS_2          75           107
  CLUS_3          44            85
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  16Q MUTATED        7     61     93
  16Q WILD-TYPE      8    112    170
D29V8, multiclass
        clus
vv       16Q MUTATED 16Q WILD-TYPE
  CLUS_1           7             8
  CLUS_2          61           112
  CLUS_3          93           170
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  16Q MUTATED       32     49     34     34
  16Q WILD-TYPE     90     53     74     49
D29V9, multiclass
        clus
vv       16Q MUTATED 16Q WILD-TYPE
  CLUS_1          32            90
  CLUS_2          49            53
  CLUS_3          34            74
  CLUS_4          34            49
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  16Q MUTATED        2      9     34     12     54     38
  16Q WILD-TYPE      2     31     57     34    101     41
D29V10, multiclass

Clustering(30) Variable = 17P MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  17P MUTATED      109     26     20
  17P WILD-TYPE    116    151     30
D30V1, multiclass
        clus
vv       17P MUTATED 17P WILD-TYPE
  CLUS_1         109           116
  CLUS_2          26           151
  CLUS_3          20            30
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  17P MUTATED       33     33     42     19     11     12      5
  17P WILD-TYPE     34     44     38     46     61     62     12
D30V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  17P MUTATED       24     20     12     21
  17P WILD-TYPE     29     31     25     44
D30V3, multiclass
        clus
vv       17P MUTATED 17P WILD-TYPE
  CLUS_1          24            29
  CLUS_2          20            31
  CLUS_3          12            25
  CLUS_4          21            44
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  17P MUTATED       10     29     38
  17P WILD-TYPE      6     43     80
D30V4, multiclass
        clus
vv       17P MUTATED 17P WILD-TYPE
  CLUS_1          10             6
  CLUS_2          29            43
  CLUS_3          38            80
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  17P MUTATED       68     44     32
  17P WILD-TYPE     97     78    101
D30V5, multiclass
        clus
vv       17P MUTATED 17P WILD-TYPE
  CLUS_1          68            97
  CLUS_2          44            78
  CLUS_3          32           101
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  17P MUTATED       66     22     56
  17P WILD-TYPE     95     79    102
D30V6, multiclass
        clus
vv       17P MUTATED 17P WILD-TYPE
  CLUS_1          66            95
  CLUS_2          22            79
  CLUS_3          56           102
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  17P MUTATED       38     73     43
  17P WILD-TYPE    102    109     86
D30V7, multiclass
        clus
vv       17P MUTATED 17P WILD-TYPE
  CLUS_1          38           102
  CLUS_2          73           109
  CLUS_3          43            86
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  17P MUTATED        8     63     83
  17P WILD-TYPE      7    110    180
D30V8, multiclass
        clus
vv       17P MUTATED 17P WILD-TYPE
  CLUS_1           8             7
  CLUS_2          63           110
  CLUS_3          83           180
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  17P MUTATED       35     42     31     35
  17P WILD-TYPE     87     60     77     48
D30V9, multiclass
        clus
vv       17P MUTATED 17P WILD-TYPE
  CLUS_1          35            87
  CLUS_2          42            60
  CLUS_3          31            77
  CLUS_4          35            48
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  17P MUTATED        1     16     24     15     53     34
  17P WILD-TYPE      3     24     67     31    102     45
D30V10, multiclass

Clustering(31) Variable = 17Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  17Q MUTATED       73     17     16
  17Q WILD-TYPE    152    160     34
D31V1, multiclass
        clus
vv       17Q MUTATED 17Q WILD-TYPE
  CLUS_1          73           152
  CLUS_2          17           160
  CLUS_3          16            34
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  17Q MUTATED       19     23     32     12      8      9      3
  17Q WILD-TYPE     48     54     48     53     64     65     14
D31V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  17Q MUTATED       11     15     10     13
  17Q WILD-TYPE     42     36     27     52
D31V3, multiclass
        clus
vv       17Q MUTATED 17Q WILD-TYPE
  CLUS_1          11            42
  CLUS_2          15            36
  CLUS_3          10            27
  CLUS_4          13            52
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  17Q MUTATED        8     17     24
  17Q WILD-TYPE      8     55     94
D31V4, multiclass
        clus
vv       17Q MUTATED 17Q WILD-TYPE
  CLUS_1           8             8
  CLUS_2          17            55
  CLUS_3          24            94
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  17Q MUTATED       44     29     23
  17Q WILD-TYPE    121     93    110
D31V5, multiclass
        clus
vv       17Q MUTATED 17Q WILD-TYPE
  CLUS_1          44           121
  CLUS_2          29            93
  CLUS_3          23           110
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  17Q MUTATED       41     16     39
  17Q WILD-TYPE    120     85    119
D31V6, multiclass
        clus
vv       17Q MUTATED 17Q WILD-TYPE
  CLUS_1          41           120
  CLUS_2          16            85
  CLUS_3          39           119
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  17Q MUTATED       27     48     30
  17Q WILD-TYPE    113    134     99
D31V7, multiclass
        clus
vv       17Q MUTATED 17Q WILD-TYPE
  CLUS_1          27           113
  CLUS_2          48           134
  CLUS_3          30            99
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  17Q MUTATED        5     43     57
  17Q WILD-TYPE     10    130    206
D31V8, multiclass
        clus
vv       17Q MUTATED 17Q WILD-TYPE
  CLUS_1           5            10
  CLUS_2          43           130
  CLUS_3          57           206
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  17Q MUTATED       27     30     20     20
  17Q WILD-TYPE     95     72     88     63
D31V9, multiclass
        clus
vv       17Q MUTATED 17Q WILD-TYPE
  CLUS_1          27            95
  CLUS_2          30            72
  CLUS_3          20            88
  CLUS_4          20            63
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  17Q MUTATED        1     11     13     10     37     25
  17Q WILD-TYPE      3     29     78     36    118     54
D31V10, multiclass

Clustering(32) Variable = 18P MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  18P MUTATED      130     41     22
  18P WILD-TYPE     95    136     28
D32V1, multiclass
        clus
vv       18P MUTATED 18P WILD-TYPE
  CLUS_1         130            95
  CLUS_2          41           136
  CLUS_3          22            28
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  18P MUTATED       42     39     48     18     16     23      7
  18P WILD-TYPE     25     38     32     47     56     51     10
D32V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  18P MUTATED       24     26     15     31
  18P WILD-TYPE     29     25     22     34
D32V3, multiclass
        clus
vv       18P MUTATED 18P WILD-TYPE
  CLUS_1          24            29
  CLUS_2          26            25
  CLUS_3          15            22
  CLUS_4          31            34
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  18P MUTATED        5     32     59
  18P WILD-TYPE     11     40     59
D32V4, multiclass
        clus
vv       18P MUTATED 18P WILD-TYPE
  CLUS_1           5            11
  CLUS_2          32            40
  CLUS_3          59            59
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  18P MUTATED       76     56     47
  18P WILD-TYPE     89     66     86
D32V5, multiclass
        clus
vv       18P MUTATED 18P WILD-TYPE
  CLUS_1          76            89
  CLUS_2          56            66
  CLUS_3          47            86
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  18P MUTATED       75     31     73
  18P WILD-TYPE     86     70     85
D32V6, multiclass
        clus
vv       18P MUTATED 18P WILD-TYPE
  CLUS_1          75            86
  CLUS_2          31            70
  CLUS_3          73            85
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  18P MUTATED       53     86     53
  18P WILD-TYPE     87     96     76
D32V7, multiclass
        clus
vv       18P MUTATED 18P WILD-TYPE
  CLUS_1          53            87
  CLUS_2          86            96
  CLUS_3          53            76
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  18P MUTATED        6     76    110
  18P WILD-TYPE      9     97    153
D32V8, multiclass
        clus
vv       18P MUTATED 18P WILD-TYPE
  CLUS_1           6             9
  CLUS_2          76            97
  CLUS_3         110           153
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  18P MUTATED       40     52     44     42
  18P WILD-TYPE     82     50     64     41
D32V9, multiclass
        clus
vv       18P MUTATED 18P WILD-TYPE
  CLUS_1          40            82
  CLUS_2          52            50
  CLUS_3          44            64
  CLUS_4          42            41
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  18P MUTATED        2     18     30     17     64     47
  18P WILD-TYPE      2     22     61     29     91     32
D32V10, multiclass

Clustering(33) Variable = 18Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  18Q MUTATED      149     53     26
  18Q WILD-TYPE     76    124     24
D33V1, multiclass
        clus
vv       18Q MUTATED 18Q WILD-TYPE
  CLUS_1         149            76
  CLUS_2          53           124
  CLUS_3          26            24
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  18Q MUTATED       46     50     50     17     22     33     10
  18Q WILD-TYPE     21     27     30     48     50     41      7
D33V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  18Q MUTATED       33     28     19     36
  18Q WILD-TYPE     20     23     18     29
D33V3, multiclass
        clus
vv       18Q MUTATED 18Q WILD-TYPE
  CLUS_1          33            20
  CLUS_2          28            23
  CLUS_3          19            18
  CLUS_4          36            29
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  18Q MUTATED        5     43     68
  18Q WILD-TYPE     11     29     50
D33V4, multiclass
        clus
vv       18Q MUTATED 18Q WILD-TYPE
  CLUS_1           5            11
  CLUS_2          43            29
  CLUS_3          68            50
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  18Q MUTATED       77     73     63
  18Q WILD-TYPE     88     49     70
D33V5, multiclass
        clus
vv       18Q MUTATED 18Q WILD-TYPE
  CLUS_1          77            88
  CLUS_2          73            49
  CLUS_3          63            70
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  18Q MUTATED       76     41     96
  18Q WILD-TYPE     85     60     62
D33V6, multiclass
        clus
vv       18Q MUTATED 18Q WILD-TYPE
  CLUS_1          76            85
  CLUS_2          41            60
  CLUS_3          96            62
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  18Q MUTATED       63     91     73
  18Q WILD-TYPE     77     91     56
D33V7, multiclass
        clus
vv       18Q MUTATED 18Q WILD-TYPE
  CLUS_1          63            77
  CLUS_2          91            91
  CLUS_3          73            56
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  18Q MUTATED        7    101    119
  18Q WILD-TYPE      8     72    144
D33V8, multiclass
        clus
vv       18Q MUTATED 18Q WILD-TYPE
  CLUS_1           7             8
  CLUS_2         101            72
  CLUS_3         119           144
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  18Q MUTATED       56     48     54     47
  18Q WILD-TYPE     66     54     54     36
D33V9, multiclass
        clus
vv       18Q MUTATED 18Q WILD-TYPE
  CLUS_1          56            66
  CLUS_2          48            54
  CLUS_3          54            54
  CLUS_4          47            36
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  18Q MUTATED        2     17     33     23     83     47
  18Q WILD-TYPE      2     23     58     23     72     32
D33V10, multiclass

Clustering(34) Variable = 19P MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  19P MUTATED       80     31     16
  19P WILD-TYPE    145    146     34
D34V1, multiclass
        clus
vv       19P MUTATED 19P WILD-TYPE
  CLUS_1          80           145
  CLUS_2          31           146
  CLUS_3          16            34
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  19P MUTATED       18     31     36     16     12     10      4
  19P WILD-TYPE     49     46     44     49     60     64     13
D34V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  19P MUTATED       17     17     14     14
  19P WILD-TYPE     36     34     23     51
D34V3, multiclass
        clus
vv       19P MUTATED 19P WILD-TYPE
  CLUS_1          17            36
  CLUS_2          17            34
  CLUS_3          14            23
  CLUS_4          14            51
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  19P MUTATED        5     24     33
  19P WILD-TYPE     11     48     85
D34V4, multiclass
        clus
vv       19P MUTATED 19P WILD-TYPE
  CLUS_1           5            11
  CLUS_2          24            48
  CLUS_3          33            85
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  19P MUTATED       46     42     27
  19P WILD-TYPE    119     80    106
D34V5, multiclass
        clus
vv       19P MUTATED 19P WILD-TYPE
  CLUS_1          46           119
  CLUS_2          42            80
  CLUS_3          27           106
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  19P MUTATED       45     22     48
  19P WILD-TYPE    116     79    110
D34V6, multiclass
        clus
vv       19P MUTATED 19P WILD-TYPE
  CLUS_1          45           116
  CLUS_2          22            79
  CLUS_3          48           110
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  19P MUTATED       37     53     36
  19P WILD-TYPE    103    129     93
D34V7, multiclass
        clus
vv       19P MUTATED 19P WILD-TYPE
  CLUS_1          37           103
  CLUS_2          53           129
  CLUS_3          36            93
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  19P MUTATED        5     52     69
  19P WILD-TYPE     10    121    194
D34V8, multiclass
        clus
vv       19P MUTATED 19P WILD-TYPE
  CLUS_1           5            10
  CLUS_2          52           121
  CLUS_3          69           194
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  19P MUTATED       31     24     33     29
  19P WILD-TYPE     91     78     75     54
D34V9, multiclass
        clus
vv       19P MUTATED 19P WILD-TYPE
  CLUS_1          31            91
  CLUS_2          24            78
  CLUS_3          33            75
  CLUS_4          29            54
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  19P MUTATED        2     11     18     13     46     27
  19P WILD-TYPE      2     29     73     33    109     52
D34V10, multiclass

Clustering(35) Variable = 19Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  19Q MUTATED       86     31     17
  19Q WILD-TYPE    139    146     33
D35V1, multiclass
        clus
vv       19Q MUTATED 19Q WILD-TYPE
  CLUS_1          86           139
  CLUS_2          31           146
  CLUS_3          17            33
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  19Q MUTATED       21     31     41     18     12      8      3
  19Q WILD-TYPE     46     46     39     47     60     66     14
D35V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  19Q MUTATED       16     22     13     15
  19Q WILD-TYPE     37     29     24     50
D35V3, multiclass
        clus
vv       19Q MUTATED 19Q WILD-TYPE
  CLUS_1          16            37
  CLUS_2          22            29
  CLUS_3          13            24
  CLUS_4          15            50
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  19Q MUTATED        7     25     34
  19Q WILD-TYPE      9     47     84
D35V4, multiclass
        clus
vv       19Q MUTATED 19Q WILD-TYPE
  CLUS_1           7             9
  CLUS_2          25            47
  CLUS_3          34            84
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  19Q MUTATED       53     40     29
  19Q WILD-TYPE    112     82    104
D35V5, multiclass
        clus
vv       19Q MUTATED 19Q WILD-TYPE
  CLUS_1          53           112
  CLUS_2          40            82
  CLUS_3          29           104
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  19Q MUTATED       54     23     45
  19Q WILD-TYPE    107     78    113
D35V6, multiclass
        clus
vv       19Q MUTATED 19Q WILD-TYPE
  CLUS_1          54           107
  CLUS_2          23            78
  CLUS_3          45           113
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  19Q MUTATED       34     66     33
  19Q WILD-TYPE    106    116     96
D35V7, multiclass
        clus
vv       19Q MUTATED 19Q WILD-TYPE
  CLUS_1          34           106
  CLUS_2          66           116
  CLUS_3          33            96
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  19Q MUTATED        4     52     77
  19Q WILD-TYPE     11    121    186
D35V8, multiclass
        clus
vv       19Q MUTATED 19Q WILD-TYPE
  CLUS_1           4            11
  CLUS_2          52           121
  CLUS_3          77           186
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  19Q MUTATED       31     33     35     26
  19Q WILD-TYPE     91     69     73     57
D35V9, multiclass
        clus
vv       19Q MUTATED 19Q WILD-TYPE
  CLUS_1          31            91
  CLUS_2          33            69
  CLUS_3          35            73
  CLUS_4          26            57
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  19Q MUTATED        1     12     19     15     45     33
  19Q WILD-TYPE      3     28     72     31    110     46
D35V10, multiclass

Clustering(36) Variable = 20P MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  20P MUTATED      132     54     23
  20P WILD-TYPE     93    123     27
D36V1, multiclass
        clus
vv       20P MUTATED 20P WILD-TYPE
  CLUS_1         132            93
  CLUS_2          54           123
  CLUS_3          23            27
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  20P MUTATED       32     53     50     22     21     25      6
  20P WILD-TYPE     35     24     30     43     51     49     11
D36V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  20P MUTATED       25     30     17     32
  20P WILD-TYPE     28     21     20     33
D36V3, multiclass
        clus
vv       20P MUTATED 20P WILD-TYPE
  CLUS_1          25            28
  CLUS_2          30            21
  CLUS_3          17            20
  CLUS_4          32            33
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  20P MUTATED       13     32     59
  20P WILD-TYPE      3     40     59
D36V4, multiclass
        clus
vv       20P MUTATED 20P WILD-TYPE
  CLUS_1          13             3
  CLUS_2          32            40
  CLUS_3          59            59
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  20P MUTATED       71     68     54
  20P WILD-TYPE     94     54     79
D36V5, multiclass
        clus
vv       20P MUTATED 20P WILD-TYPE
  CLUS_1          71            94
  CLUS_2          68            54
  CLUS_3          54            79
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  20P MUTATED       68     44     81
  20P WILD-TYPE     93     57     77
D36V6, multiclass
        clus
vv       20P MUTATED 20P WILD-TYPE
  CLUS_1          68            93
  CLUS_2          44            57
  CLUS_3          81            77
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  20P MUTATED       59     83     66
  20P WILD-TYPE     81     99     63
D36V7, multiclass
        clus
vv       20P MUTATED 20P WILD-TYPE
  CLUS_1          59            81
  CLUS_2          83            99
  CLUS_3          66            63
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  20P MUTATED        8     90    110
  20P WILD-TYPE      7     83    153
D36V8, multiclass
        clus
vv       20P MUTATED 20P WILD-TYPE
  CLUS_1           8             7
  CLUS_2          90            83
  CLUS_3         110           153
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  20P MUTATED       54     45     47     42
  20P WILD-TYPE     68     57     61     41
D36V9, multiclass
        clus
vv       20P MUTATED 20P WILD-TYPE
  CLUS_1          54            68
  CLUS_2          45            57
  CLUS_3          47            61
  CLUS_4          42            41
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  20P MUTATED        2     18     34     14     79     41
  20P WILD-TYPE      2     22     57     32     76     38
D36V10, multiclass

Clustering(37) Variable = 20Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  20Q MUTATED      128     53     22
  20Q WILD-TYPE     97    124     28
D37V1, multiclass
        clus
vv       20Q MUTATED 20Q WILD-TYPE
  CLUS_1         128            97
  CLUS_2          53           124
  CLUS_3          22            28
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  20Q MUTATED       34     49     47     19     21     24      9
  20Q WILD-TYPE     33     28     33     46     51     50      8
D37V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  20Q MUTATED       26     27     17     31
  20Q WILD-TYPE     27     24     20     34
D37V3, multiclass
        clus
vv       20Q MUTATED 20Q WILD-TYPE
  CLUS_1          26            27
  CLUS_2          27            24
  CLUS_3          17            20
  CLUS_4          31            34
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  20Q MUTATED       10     32     59
  20Q WILD-TYPE      6     40     59
D37V4, multiclass
        clus
vv       20Q MUTATED 20Q WILD-TYPE
  CLUS_1          10             6
  CLUS_2          32            40
  CLUS_3          59            59
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  20Q MUTATED       70     67     52
  20Q WILD-TYPE     95     55     81
D37V5, multiclass
        clus
vv       20Q MUTATED 20Q WILD-TYPE
  CLUS_1          70            95
  CLUS_2          67            55
  CLUS_3          52            81
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  20Q MUTATED       68     41     80
  20Q WILD-TYPE     93     60     78
D37V6, multiclass
        clus
vv       20Q MUTATED 20Q WILD-TYPE
  CLUS_1          68            93
  CLUS_2          41            60
  CLUS_3          80            78
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  20Q MUTATED       57     81     64
  20Q WILD-TYPE     83    101     65
D37V7, multiclass
        clus
vv       20Q MUTATED 20Q WILD-TYPE
  CLUS_1          57            83
  CLUS_2          81           101
  CLUS_3          64            65
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  20Q MUTATED        8     89    105
  20Q WILD-TYPE      7     84    158
D37V8, multiclass
        clus
vv       20Q MUTATED 20Q WILD-TYPE
  CLUS_1           8             7
  CLUS_2          89            84
  CLUS_3         105           158
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  20Q MUTATED       55     45     43     41
  20Q WILD-TYPE     67     57     65     42
D37V9, multiclass
        clus
vv       20Q MUTATED 20Q WILD-TYPE
  CLUS_1          55            67
  CLUS_2          45            57
  CLUS_3          43            65
  CLUS_4          41            42
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  20Q MUTATED        2     17     37     14     78     36
  20Q WILD-TYPE      2     23     54     32     77     43
D37V10, multiclass

Clustering(38) Variable = 21Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  21Q MUTATED      126     39     26
  21Q WILD-TYPE     99    138     24
D38V1, multiclass
        clus
vv       21Q MUTATED 21Q WILD-TYPE
  CLUS_1         126            99
  CLUS_2          39           138
  CLUS_3          26            24
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  21Q MUTATED       33     45     50     14     19     21      9
  21Q WILD-TYPE     34     32     30     51     53     53      8
D38V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  21Q MUTATED       24     26     18     30
  21Q WILD-TYPE     29     25     19     35
D38V3, multiclass
        clus
vv       21Q MUTATED 21Q WILD-TYPE
  CLUS_1          24            29
  CLUS_2          26            25
  CLUS_3          18            19
  CLUS_4          30            35
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  21Q MUTATED        6     35     57
  21Q WILD-TYPE     10     37     61
D38V4, multiclass
        clus
vv       21Q MUTATED 21Q WILD-TYPE
  CLUS_1           6            10
  CLUS_2          35            37
  CLUS_3          57            61
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  21Q MUTATED       68     58     52
  21Q WILD-TYPE     97     64     81
D38V5, multiclass
        clus
vv       21Q MUTATED 21Q WILD-TYPE
  CLUS_1          68            97
  CLUS_2          58            64
  CLUS_3          52            81
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  21Q MUTATED       68     38     72
  21Q WILD-TYPE     93     63     86
D38V6, multiclass
        clus
vv       21Q MUTATED 21Q WILD-TYPE
  CLUS_1          68            93
  CLUS_2          38            63
  CLUS_3          72            86
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  21Q MUTATED       61     78     51
  21Q WILD-TYPE     79    104     78
D38V7, multiclass
        clus
vv       21Q MUTATED 21Q WILD-TYPE
  CLUS_1          61            79
  CLUS_2          78           104
  CLUS_3          51            78
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  21Q MUTATED        5     78    107
  21Q WILD-TYPE     10     95    156
D38V8, multiclass
        clus
vv       21Q MUTATED 21Q WILD-TYPE
  CLUS_1           5            10
  CLUS_2          78            95
  CLUS_3         107           156
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  21Q MUTATED       51     43     44     40
  21Q WILD-TYPE     71     59     64     43
D38V9, multiclass
        clus
vv       21Q MUTATED 21Q WILD-TYPE
  CLUS_1          51            71
  CLUS_2          43            59
  CLUS_3          44            64
  CLUS_4          40            43
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  21Q MUTATED        1     17     27     20     71     42
  21Q WILD-TYPE      3     23     64     26     84     37
D38V10, multiclass

Clustering(39) Variable = 22Q MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  22Q MUTATED      104     39     19
  22Q WILD-TYPE    121    138     31
D39V1, multiclass
        clus
vv       22Q MUTATED 22Q WILD-TYPE
  CLUS_1         104           121
  CLUS_2          39           138
  CLUS_3          19            31
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  22Q MUTATED       25     40     44     14     12     21      6
  22Q WILD-TYPE     42     37     36     51     60     53     11
D39V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  22Q MUTATED       17     24     13     22
  22Q WILD-TYPE     36     27     24     43
D39V3, multiclass
        clus
vv       22Q MUTATED 22Q WILD-TYPE
  CLUS_1          17            36
  CLUS_2          24            27
  CLUS_3          13            24
  CLUS_4          22            43
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  22Q MUTATED        5     26     45
  22Q WILD-TYPE     11     46     73
D39V4, multiclass
        clus
vv       22Q MUTATED 22Q WILD-TYPE
  CLUS_1           5            11
  CLUS_2          26            46
  CLUS_3          45            73
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  22Q MUTATED       56     45     52
  22Q WILD-TYPE    109     77     81
D39V5, multiclass
        clus
vv       22Q MUTATED 22Q WILD-TYPE
  CLUS_1          56           109
  CLUS_2          45            77
  CLUS_3          52            81
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  22Q MUTATED       55     34     64
  22Q WILD-TYPE    106     67     94
D39V6, multiclass
        clus
vv       22Q MUTATED 22Q WILD-TYPE
  CLUS_1          55           106
  CLUS_2          34            67
  CLUS_3          64            94
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  22Q MUTATED       53     65     43
  22Q WILD-TYPE     87    117     86
D39V7, multiclass
        clus
vv       22Q MUTATED 22Q WILD-TYPE
  CLUS_1          53            87
  CLUS_2          65           117
  CLUS_3          43            86
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  22Q MUTATED        7     68     86
  22Q WILD-TYPE      8    105    177
D39V8, multiclass
        clus
vv       22Q MUTATED 22Q WILD-TYPE
  CLUS_1           7             8
  CLUS_2          68           105
  CLUS_3          86           177
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  22Q MUTATED       42     42     32     33
  22Q WILD-TYPE     80     60     76     50
D39V9, multiclass
        clus
vv       22Q MUTATED 22Q WILD-TYPE
  CLUS_1          42            80
  CLUS_2          42            60
  CLUS_3          32            76
  CLUS_4          33            50
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  22Q MUTATED        3     20     19     16     59     32
  22Q WILD-TYPE      1     20     72     30     96     47
D39V10, multiclass

Clustering(40) Variable = XQ MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  XQ MUTATED       99     30     14
  XQ WILD-TYPE    126    147     36
D40V1, multiclass
        clus
vv       XQ MUTATED XQ WILD-TYPE
  CLUS_1         99          126
  CLUS_2         30          147
  CLUS_3         14           36
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6 CLUS_7
  XQ MUTATED       22     36     45     16     10     10      4
  XQ WILD-TYPE     45     41     35     49     62     64     13
D40V2, multiclass
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  XQ MUTATED       14     15     13     29
  XQ WILD-TYPE     39     36     24     36
D40V3, multiclass
        clus
vv       XQ MUTATED XQ WILD-TYPE
  CLUS_1         14           39
  CLUS_2         15           36
  CLUS_3         13           24
  CLUS_4         29           36
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  XQ MUTATED        3     19     49
  XQ WILD-TYPE     13     53     69
D40V4, multiclass
        clus
vv       XQ MUTATED XQ WILD-TYPE
  CLUS_1          3           13
  CLUS_2         19           53
  CLUS_3         49           69
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  XQ MUTATED       59     42     34
  XQ WILD-TYPE    106     80     99
D40V5, multiclass
        clus
vv       XQ MUTATED XQ WILD-TYPE
  CLUS_1         59          106
  CLUS_2         42           80
  CLUS_3         34           99
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  XQ MUTATED       56     22     57
  XQ WILD-TYPE    105     79    101
D40V6, multiclass
        clus
vv       XQ MUTATED XQ WILD-TYPE
  CLUS_1         56          105
  CLUS_2         22           79
  CLUS_3         57          101
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  XQ MUTATED       33     73     36
  XQ WILD-TYPE    107    109     93
D40V7, multiclass
        clus
vv       XQ MUTATED XQ WILD-TYPE
  CLUS_1         33          107
  CLUS_2         73          109
  CLUS_3         36           93
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  XQ MUTATED        5     53     84
  XQ WILD-TYPE     10    120    179
D40V8, multiclass
        clus
vv       XQ MUTATED XQ WILD-TYPE
  CLUS_1          5           10
  CLUS_2         53          120
  CLUS_3         84          179
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  XQ MUTATED       31     36     36     24
  XQ WILD-TYPE     91     66     72     59
D40V9, multiclass
        clus
vv       XQ MUTATED XQ WILD-TYPE
  CLUS_1         31           91
  CLUS_2         36           66
  CLUS_3         36           72
  CLUS_4         24           59
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  XQ MUTATED        0     13     20     12     45     37
  XQ WILD-TYPE      4     27     71     34    110     42
D40V10, multiclass
> q(save="no")
